Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002141

Physical Location & Seq

Genomic Coordinates Reverse (-)

35843651 .. 35848103

Gene Structure 4453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG287900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGCGAACGGTATCCAATCGCCGACTCCGTTCGTGTTGAGCCCGAACAACGACCAGCTCGAACGCGCGCAGGTACGCGCAGCACGCGCCGCCGCCAATAGGCGCAAAGCTGCTGCGGTTACGAGTCTTCCTTCTCCGCCGAACGATCCTTGCCTCAGCGACGAACAGGTTGCCGAACTCTTCCACCGCTGCATCAAACTCGCCAGCGAAAATAAAATAAACCAGAAGAACAGTTGGGAGCTTAAGCTTATAGATCATCTCAGCGACATTATTAAAGTCGAAGCGCGAAATGACTCAGAGACTAATTTCCAAAAGGCAAGTTGTACATTAGAAGCAGGGGTGAAAATTTACTCTCTGAGGGTGGATTCAGTGCACGCTGAAGCGTATAAAGTTCTGGGTAGGATCAATCGAGCTGTTCTTGAAGATGGACAAGAGACCACTATGGAGGATGGCAATGTCAGCGATGGGAAGGATAAGAGTCAGTGTAAGAAAGAGGTGGAGCGGAAGGTATCACCACTATCAACATTGGAATCGTCCTTTGAAGCTCTGAACTTAAAGAAGTTTGAAGTTGCATTCGTGGTAGATCCCCTGTATCATCAGACATCTGCACAGTTTGATGAAGGTGGAGCCAAGGGTCTGCTATTGAATAATCTTGGAGTATATGGAAGGTGCCAGGTGCTTTTTGATTCTTCAGAAATTCCAAGGAAGTGCAGATCATGTCGATTGAAAAATAAAGCCTTGGATTTGATAGATTTATCTTTTGAGAAAGAATCAATTCAGCAGATGGTGACTCACATGCTTGGAAAAAATGAAATTTCTCCTACTCTAAATGATATACTATGCCGTATTGATAAAGATAATCGACGACCAGCACAAGTTTTTAATATAACCCAGAATCCAGATCTTCCTGATGATGCATTTGATGATAACGAAGTTGGGTTAGACTTTTCATCTGGGAGATATGACATGGCGACCATTGAACATGACCGTGAACATGAACGTGATGATGATATATATGTCAGTCATGAGGATGTAAATTTTGGAACATTTCAAAGTCATCAGGAGGATAATAACTCGTACACATCAGTTGAAGCTGATATGGATGCCAGATTTGAGGAAGTTTCCACGTTTTTGTTACAAGGGTTGGCAATCACTTCCAAGAAAAATGCATGGGCTGGTCCTGATCACTGGAAATATTGGAGGTCTAAGGGTTCAGAGGATGCTCCTGCCACTCCAAGTACACCAACTAATAAGAGATCAAAGAACAAAAACAATACACAAGTTGAGCTTGTTTTCACAACATCTATAGACAAAGAATTTCCAGATATATTTTCTCCACCAAAAAATTTGAAGTCCTTACTCCTATCTGCAAATAGAGTACCAAGTCACAGGCTTCCAGAAGATTGCCATTATCCAGCTGACGATCTTGTCAAGTTGTTCCTTCTTCCTAGTGTTCTGTTGCTTGGGAAGAGAAGACGGAATCATAAAGATGATAACTCATGGGAACAAAGAAATAATTTTGATGAAGCATTGCCATCATGGGGCAATGAGAGTGTGGCTAGTGATCAATATAATGATGGATGTGCTCATGGCAGTGTGGAAGATTTGGATACACTAATCCCTCAACCTCGCCAGGTAACCAGAATTGAAGTTCAGTATGACAGAACTTCAAAAGGAGTTGATCTTCATGCATTGAAAAAAACTCTTTGGGATCACATGCAAGAATTTGTTAAAGGTCCTGAACTGGAGTTGAAGGATACTATATCTTTCAAAGGTATCCTGTCCACCTTTCCCATCAACTGCCAAGCTACAATGCCTGAGGATATTTCACCCCATTTGTGTTTCATCTGCCTTTTGCATTTGGCAAATGAGCATGGGCTAAGCATACATGGCTTCCCCAGTTTAGATGACTTGAGCATTCATCTTCCCTCTTGTTTAAACTCATCCTATGGAGTGGTCCAGCCTTCATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd2

Protein Analysis

657

Amino Acids

73.88

Weight (kDa)

5.34

Isoelectric Point (pI)

42.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cnd2	PF05786	15 - 510	8.9e-77	Condensin complex subunit 2
Cnd2	PF05786	530 - 640	4.9e-23	Condensin complex subunit 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32590
fragaria_vesca	FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_6g42730 FvH4_6g42730 FvH4_6g42730
malus_domestica	MD03G1195600.v1.1 MD03G1195700.v1.1 MD09G1071300.v1.1 MD11G1212100.v1.1 MD17G1101300.v1.1
prunus_persica	Prupe.3G213700_v2.0.a1 Prupe.4G220400_v2.0.a1
pyrus_communis	pycom03g14790 pycom09g03480 pycom17g09560 pycom17g09570
rosa_chinensis	RchiOBHm_Chr2g0158621 RchiOBHm_Chr5g0041001
rosa_laevigata	RLG00000021100 RLG00000034019
rosa_multiflora	Rmu_co8379437.1_g000001 Rmu_sc0005650.1_g000010 Rmu_sc0030339.1_g000001 Rmu_sc0040010.1_g000001 Rmu_sc0042494.1_g000001 Rmu_ssc0000284.1_g000007
rosa_roxburghii	Rroxscaffold_1G00039700 Rroxscaffold_2G00091170
rosa_rugosa	Rorug02G0471000 Rorug05G0189400
rosa_samantha	Rh2AG536600 Rh2BG549700 Rh2CG520300 Rh2DG559400 Rh5AG274600 Rh5BG279900 Rh5CG312000 Rh5DG287900
rosa_wichuraiana	Rw2G044420 Rw5G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1427
Acc36I	ACCTGC	1 cut(s)	61
AccB1I	GGYRCC	1 cut(s)	669
AccBSI	CCGCTC	1 cut(s)	502
AccII	CGCG	5 cut(s)	66, 68, 78, 87, 286
AciI	CCGC	6 cut(s)	90, 93, 116, 137, 187, 502
AclWI	GGATC	4 cut(s)	140, 410, 578, 1719
AcsI	RAATTY	7 cut(s)	345, 696, 813, 1036, 1316, 1345, 1724
AcuI	CTGAAG	2 cut(s)	399, 675
AfaI	GTAC	5 cut(s)	75, 325, 1079, 1240, 1380
AfiI	CCNNNNNNNGG	2 cut(s)	99, 1541
AflII	CTTAAG	1 cut(s)	242
AjnI	CCWGG	2 cut(s)	672, 1632
Alw21I	GWGCWC	2 cut(s)	375, 1588
Alw26I	GTCTC	2 cut(s)	293, 428
Alw44I	GTGCAC	1 cut(s)	371
AlwI	GGATC	4 cut(s)	140, 410, 578, 1719
ApaLI	GTGCAC	1 cut(s)	371
ApeKI	GCWGC	4 cut(s)	80, 110, 113, 189
ApoI	RAATTY	7 cut(s)	345, 696, 813, 1036, 1316, 1345, 1724
Asp700I	GAANNNNTTC	1 cut(s)	774
AspLEI	GCGC	6 cut(s)	68, 70, 80, 89, 105, 286
AspS9I	GGNCC	3 cut(s)	1178, 1736, 1957
AsuHPI	GGTGA	4 cut(s)	352, 504, 799, 1821
AvaII	GGWCC	3 cut(s)	1178, 1736, 1957
AxyI	CCTNAGG	1 cut(s)	1818
BaeGI	GKGCMC	1 cut(s)	375
BanI	GGYRCC	1 cut(s)	669
BanII	GRGCYC	1 cut(s)	44
BbsI	GAAGAC	2 cut(s)	119, 1480
Bbv12I	GWGCWC	2 cut(s)	375, 1588
BbvCI	CCTCAGC	1 cut(s)	155
BbvI	GCAGC	4 cut(s)	92, 97, 100, 176
BccI	CCATC	7 cut(s)	419, 443, 458, 778, 1543, 1571, 1802
BceAI	ACGGC	1 cut(s)	828
BcgI	CGANNNNNNTGC	4 cut(s)	152, 181, 186, 215
BciT130I	CCWGG	2 cut(s)	674, 1634
BciVI	GTATCC	4 cut(s)	23, 1603, 1750, 1787
BclI	TGATCA	2 cut(s)	1183, 1564
BcoDI	GTCTC	2 cut(s)	293, 428
BfaI	CTAG	2 cut(s)	1449, 1560
BfmI	CTRYAG	1 cut(s)	1305
BfrI	CTTAAG	1 cut(s)	242
BfuAI	ACCTGC	1 cut(s)	61
BfuI	GTATCC	4 cut(s)	23, 1603, 1750, 1787
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	6 cut(s)	81, 90, 93, 111, 114, 190
BlpI	GCTNAGC	1 cut(s)	1880
BlsI	GCNGC	6 cut(s)	82, 91, 94, 112, 115, 191
Bme1390I	CCNGG	2 cut(s)	674, 1634
Bme18I	GGWCC	3 cut(s)	1178, 1736, 1957
BmgT120I	GGNCC	3 cut(s)	1178, 1736, 1957
BmiI	GGNNCC	2 cut(s)	628, 671
BmrFI	CCNGG	2 cut(s)	674, 1634
BmrI	ACTGGG	1 cut(s)	1893
BmsI	GCATC	4 cut(s)	201, 904, 1093, 1210
BmuI	ACTGGG	1 cut(s)	1893
BpiI	GAAGAC	2 cut(s)	119, 1480
BpmI	CTGGAG	1 cut(s)	1766
Bpu10I	CCTNAGC	1 cut(s)	155
Bpu1102I	GCTNAGC	1 cut(s)	1880
BpuEI	CTTGAG	1 cut(s)	1933
BsaI	GGTCTC	1 cut(s)	428
BsaJI	CCNNGG	3 cut(s)	630, 701, 738
Bsc4I	CCNNNNNNNGG	2 cut(s)	99, 1541
Bse1I	ACTGG	3 cut(s)	1193, 1749, 1899
Bse21I	CCTNAGG	1 cut(s)	1818
Bse3DI	GCAATG	3 cut(s)	460, 1529, 1552
BseBI	CCWGG	2 cut(s)	674, 1634
BseDI	CCNNGG	3 cut(s)	630, 701, 738
BseGI	GGATG	6 cut(s)	454, 1036, 1108, 1225, 1586, 1943
BseLI	CCNNNNNNNGG	2 cut(s)	99, 1541
BseMI	GCAATG	3 cut(s)	460, 1529, 1552
BseMII	CTCAG	5 cut(s)	169, 274, 309, 347, 1809
BseNI	ACTGG	3 cut(s)	1193, 1749, 1899
BsePI	GCGCGC	1 cut(s)	66
BseSI	GKGCMC	1 cut(s)	375
BseXI	GCAGC	4 cut(s)	92, 97, 100, 176
BsgI	GTGCAG	2 cut(s)	591, 730
Bsh1236I	CGCG	5 cut(s)	66, 68, 78, 87, 286
BshNI	GGYRCC	1 cut(s)	669
BsiHKAI	GWGCWC	2 cut(s)	375, 1588
BslI	CCNNNNNNNGG	2 cut(s)	99, 1541
BsmAI	GTCTC	2 cut(s)	293, 428
BsmI	GAATGC	2 cut(s)	572, 1917
Bso31I	GGTCTC	1 cut(s)	428
Bsp1286I	GDGCHC	3 cut(s)	44, 375, 1588
Bsp1407I	TGTACA	1 cut(s)	323
Bsp1720I	GCTNAGC	1 cut(s)	1880
BspACI	CCGC	6 cut(s)	90, 93, 116, 137, 187, 502
BspCNI	CTCAG	5 cut(s)	168, 273, 308, 348, 1810
BspFNI	CGCG	5 cut(s)	66, 68, 78, 87, 286
BspHI	TCATGA	1 cut(s)	1024
BspLI	GGNNCC	2 cut(s)	628, 671
BspMI	ACCTGC	1 cut(s)	61
BspPI	GGATC	4 cut(s)	140, 410, 578, 1719
BspT107I	GGYRCC	1 cut(s)	669
BspTI	CTTAAG	1 cut(s)	242
BspTNI	GGTCTC	1 cut(s)	428
BsrBI	CCGCTC	1 cut(s)	502
BsrDI	GCAATG	3 cut(s)	460, 1529, 1552
BsrGI	TGTACA	1 cut(s)	323
BsrI	ACTGG	3 cut(s)	1193, 1749, 1899
BssECI	CCNNGG	3 cut(s)	630, 701, 738
BssHII	GCGCGC	1 cut(s)	66
BssT1I	CCWWGG	3 cut(s)	630, 701, 738
Bst2UI	CCWGG	2 cut(s)	674, 1634
Bst4CI	ACNGT	4 cut(s)	11, 233, 612, 989
Bst6I	CTCTTC	2 cut(s)	185, 1463
BstAFI	CTTAAG	1 cut(s)	242
BstAUI	TGTACA	1 cut(s)	323
BstC8I	GCNNGC	4 cut(s)	68, 85, 205, 375
BstDEI	CTNAG	7 cut(s)	155, 260, 295, 356, 1206, 1818, 1880
BstEII	GGTNACC	1 cut(s)	1636
BstF5I	GGATG	6 cut(s)	454, 1036, 1108, 1225, 1586, 1943
BstFNI	CGCG	5 cut(s)	66, 68, 78, 87, 286
BstHHI	GCGC	6 cut(s)	68, 70, 80, 89, 105, 286
BstMAI	GTCTC	2 cut(s)	293, 428
BstMWI	GCNNNNNNNGC	5 cut(s)	84, 86, 89, 459, 1890
BstNI	CCWGG	2 cut(s)	674, 1634
BstNSI	RCATGY	2 cut(s)	799, 1720
BstPI	GGTNACC	1 cut(s)	1636
BstSCI	CCNGG	2 cut(s)	672, 1632
BstSFI	CTRYAG	1 cut(s)	1305
BstSLI	GKGCMC	1 cut(s)	375
BstUI	CGCG	5 cut(s)	66, 68, 78, 87, 286
BstV1I	GCAGC	4 cut(s)	92, 97, 100, 176
BstV2I	GAAGAC	2 cut(s)	119, 1480
BstX2I	RGATCY	2 cut(s)	583, 901
BstYI	RGATCY	2 cut(s)	583, 901
Bsu36I	CCTNAGG	1 cut(s)	1818
BsuI	GTATCC	4 cut(s)	23, 1603, 1750, 1787
BtgZI	GCGATG	1 cut(s)	477
BtsCI	GGATG	6 cut(s)	454, 1036, 1108, 1225, 1586, 1943
BtsI	GCAGTG	1 cut(s)	1600
BtsIMutI	CAGTG	4 cut(s)	375, 488, 1186, 1600
BveI	ACCTGC	1 cut(s)	61
Cac8I	GCNNGC	4 cut(s)	68, 85, 205, 375
CciI	TCATGA	1 cut(s)	1024
CfoI	GCGC	6 cut(s)	68, 70, 80, 89, 105, 286
Cfr13I	GGNCC	3 cut(s)	1178, 1736, 1957
Csp6I	GTAC	5 cut(s)	74, 324, 1078, 1239, 1379
CviQI	GTAC	5 cut(s)	74, 324, 1078, 1239, 1379
DdeI	CTNAG	7 cut(s)	155, 260, 295, 356, 1206, 1818, 1880
DraI	TTTAAA	1 cut(s)	1938
DrdI	GACNNNNNNGTC	1 cut(s)	1427
DseDI	GACNNNNNNGTC	1 cut(s)	1427
Eam1104I	CTCTTC	2 cut(s)	185, 1463
EarI	CTCTTC	2 cut(s)	185, 1463
EciI	GGCGGA	1 cut(s)	126
Eco130I	CCWWGG	3 cut(s)	630, 701, 738
Eco24I	GRGCYC	1 cut(s)	44
Eco31I	GGTCTC	1 cut(s)	428
Eco47I	GGWCC	3 cut(s)	1178, 1736, 1957
Eco57I	CTGAAG	2 cut(s)	399, 675
Eco81I	CCTNAGG	1 cut(s)	1818
Eco91I	GGTNACC	1 cut(s)	1636
EcoO109I	RGGNCCY	1 cut(s)	1736
EcoO65I	GGTNACC	1 cut(s)	1636
EcoRII	CCWGG	2 cut(s)	672, 1632
EcoT14I	CCWWGG	3 cut(s)	630, 701, 738
EcoT22I	ATGCAT	3 cut(s)	919, 1171, 1693
EcoT38I	GRGCYC	1 cut(s)	44
ErhI	CCWWGG	3 cut(s)	630, 701, 738
FalI	AAGNNNNNCTT	2 cut(s)	1272, 1304
FbaI	TGATCA	2 cut(s)	1183, 1564
Fnu4HI	GCNGC	6 cut(s)	81, 90, 93, 111, 114, 190
FokI	GGATG	6 cut(s)	461, 1043, 1115, 1232, 1593, 1930
FriOI	GRGCYC	1 cut(s)	44
Fsp4HI	GCNGC	6 cut(s)	81, 90, 93, 111, 114, 190
FspBI	CTAG	2 cut(s)	1449, 1560
GlaI	GCGC	6 cut(s)	67, 69, 79, 88, 104, 285
GluI	GCNGC	6 cut(s)	81, 90, 93, 111, 114, 190
GsuI	CTGGAG	1 cut(s)	1766
HhaI	GCGC	6 cut(s)	68, 70, 80, 89, 105, 286
Hin6I	GCGC	6 cut(s)	66, 68, 78, 87, 103, 284
HinP1I	GCGC	6 cut(s)	66, 68, 78, 87, 103, 284
HindIII	AAGCTT	1 cut(s)	245
HphI	GGTGA	4 cut(s)	352, 504, 799, 1821
Hpy166II	GTNNAC	5 cut(s)	373, 992, 1080, 1241, 1785
Hpy188I	TCNGA	6 cut(s)	298, 357, 549, 600, 694, 1216
Hpy188III	TCNNGA	9 cut(s)	419, 899, 908, 1025, 1061, 1181, 1322, 1397, 1739
Hpy8I	GTNNAC	5 cut(s)	373, 992, 1080, 1241, 1785
Hpy99I	CGWCG	2 cut(s)	164, 867
HpyAV	CCTTC	8 cut(s)	141, 463, 499, 614, 660, 1451, 1747, 1974
HpyCH4III	ACNGT	4 cut(s)	11, 233, 612, 989
HpyCH4IV	ACGT	2 cut(s)	1000, 1127
HpyF10VI	GCNNNNNNNGC	5 cut(s)	84, 86, 89, 459, 1890
HpyF3I	CTNAG	7 cut(s)	155, 260, 295, 356, 1206, 1818, 1880
HpySE526I	ACGT	2 cut(s)	1000, 1127
HspAI	GCGC	6 cut(s)	66, 68, 78, 87, 103, 284
Ksp22I	TGATCA	2 cut(s)	1183, 1564
LmnI	GCTCC	4 cut(s)	238, 499, 626, 1228
Lsp1109I	GCAGC	4 cut(s)	92, 97, 100, 176
LweI	GCATC	4 cut(s)	201, 904, 1093, 1210
MaeI	CTAG	2 cut(s)	1449, 1560
MaeII	ACGT	2 cut(s)	1000, 1127
MaeIII	GTNAC	5 cut(s)	118, 787, 1134, 1385, 1636
MbiI	CCGCTC	1 cut(s)	502
MflI	RGATCY	2 cut(s)	583, 901
MhlI	GDGCHC	3 cut(s)	44, 375, 1588
MlyI	GAGTC	5 cut(s)	19, 133, 287, 487, 784
Mph1103I	ATGCAT	3 cut(s)	919, 1171, 1693
MroXI	GAANNNNTTC	1 cut(s)	774
MseI	TTAA	6 cut(s)	243, 273, 554, 882, 1731, 1937
MslI	CAYNNNNRTG	5 cut(s)	987, 999, 1029, 1488, 1593
MspA1I	CMGCKG	2 cut(s)	189, 1418
MspCI	CTTAAG	1 cut(s)	242
MspR9I	CCNGG	2 cut(s)	674, 1634
MssI	GTTTAAAC	1 cut(s)	1938
Mva1269I	GAATGC	2 cut(s)	572, 1917
MvaI	CCWGG	2 cut(s)	674, 1634
MvnI	CGCG	5 cut(s)	66, 68, 78, 87, 286
MwoI	GCNNNNNNNGC	5 cut(s)	84, 86, 89, 459, 1890
NlaIV	GGNNCC	2 cut(s)	628, 671
NmuCI	GTSAC	2 cut(s)	787, 1385
NsiI	ATGCAT	3 cut(s)	919, 1171, 1693
NspI	RCATGY	2 cut(s)	799, 1720
PagI	TCATGA	1 cut(s)	1024
PauI	GCGCGC	1 cut(s)	66
PcsI	WCGNNNNNNNCGW	2 cut(s)	26, 57
PctI	GAATGC	2 cut(s)	572, 1917
PdmI	GAANNNNTTC	1 cut(s)	774
PfeI	GAWTC	6 cut(s)	365, 530, 686, 770, 895, 1480
PkrI	GCNGC	6 cut(s)	82, 91, 94, 112, 115, 191
PleI	GAGTC	5 cut(s)	19, 132, 287, 486, 784
PmeI	GTTTAAAC	1 cut(s)	1938
PpsI	GAGTC	5 cut(s)	19, 132, 287, 486, 784
PpuMI	RGGWCCY	1 cut(s)	1736
Psp5II	RGGWCCY	1 cut(s)	1736
Psp6I	CCWGG	2 cut(s)	672, 1632
PspEI	GGTNACC	1 cut(s)	1636
PspGI	CCWGG	2 cut(s)	672, 1632
PspN4I	GGNNCC	2 cut(s)	628, 671
PspPI	GGNCC	3 cut(s)	1178, 1736, 1957
PspPPI	RGGWCCY	1 cut(s)	1736
PsuI	RGATCY	2 cut(s)	583, 901
PteI	GCGCGC	1 cut(s)	66
PvuII	CAGCTG	1 cut(s)	1418
RsaI	GTAC	5 cut(s)	75, 325, 1079, 1240, 1380
RsaNI	GTAC	5 cut(s)	74, 324, 1078, 1239, 1379
RseI	CAYNNNNRTG	5 cut(s)	987, 999, 1029, 1488, 1593
SaqAI	TTAA	6 cut(s)	243, 273, 554, 882, 1731, 1937
SatI	GCNGC	6 cut(s)	81, 90, 93, 111, 114, 190
Sau96I	GGNCC	3 cut(s)	1178, 1736, 1957
SchI	GAGTC	5 cut(s)	19, 133, 287, 487, 784
ScrFI	CCNGG	2 cut(s)	674, 1634
SduI	GDGCHC	3 cut(s)	44, 375, 1588
SfaNI	GCATC	4 cut(s)	201, 904, 1093, 1210
SfcI	CTRYAG	1 cut(s)	1305
SinI	GGWCC	3 cut(s)	1178, 1736, 1957
SmiMI	CAYNNNNRTG	5 cut(s)	987, 999, 1029, 1488, 1593
SmlI	CTYRAG	2 cut(s)	242, 1912
SmoI	CTYRAG	2 cut(s)	242, 1912
SsiI	CCGC	6 cut(s)	90, 93, 116, 137, 187, 502
SspI	AATATT	1 cut(s)	1196
SspMI	CTAG	2 cut(s)	1449, 1560
StyD4I	CCNGG	2 cut(s)	672, 1632
StyI	CCWWGG	3 cut(s)	630, 701, 738
TaaI	ACNGT	4 cut(s)	11, 233, 612, 989
TaiI	ACGT	2 cut(s)	1003, 1130
TaqI	TCGA	5 cut(s)	60, 279, 409, 721, 862
TatI	WGTACW	2 cut(s)	323, 1238
TauI	GCSGC	2 cut(s)	92, 95
TfiI	GAWTC	6 cut(s)	365, 530, 686, 770, 895, 1480
Tru1I	TTAA	6 cut(s)	243, 273, 554, 882, 1731, 1937
Tru9I	TTAA	6 cut(s)	243, 273, 554, 882, 1731, 1937
TscAI	CASTG	4 cut(s)	375, 488, 1193, 1600
TseFI	GTSAC	2 cut(s)	787, 1385
TseI	GCWGC	4 cut(s)	80, 110, 113, 189
Tsp45I	GTSAC	2 cut(s)	787, 1385
TspDTI	ATGAA	9 cut(s)	633, 825, 939, 1011, 1539, 1676, 1834, 1910, 1956
TspGWI	ACGGA	2 cut(s)	18, 1492
TspRI	CASTG	4 cut(s)	375, 488, 1193, 1600
Vha464I	CTTAAG	1 cut(s)	242
VneI	GTGCAC	1 cut(s)	371
VpaK11BI	GGWCC	3 cut(s)	1178, 1736, 1957
XapI	RAATTY	7 cut(s)	345, 696, 813, 1036, 1316, 1345, 1724
XceI	RCATGY	2 cut(s)	799, 1720
XmnI	GAANNNNTTC	1 cut(s)	774
XspI	CTAG	2 cut(s)	1449, 1560
Zsp2I	ATGCAT	3 cut(s)	919, 1171, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.