Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002141

Physical Location & Seq

Genomic Coordinates Forward (+)

30948595 .. 30954019

Gene Structure 5425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1212100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGGCGGAGGCAATGAGTCCAAAACCGCCAGCAGAGCCGAGGAGTACGGCGTCGACGGCGAGCCGTCCCCAATCGCCTACCAGTCCGCTTTTCGTTTTGGGCTCCAACGACGACCAGCTCGAACGTGCACAGGCACGCGTGGCACGCGCCGCCGCTATTCGTCGCAAGGCGGCTACAGTTTCCGCTCATTCTTCTCTGCCGGACGATCGTTGTCTCAGCAGAGAACAGATTATAAAACTCTTTCAAGAATGTATCAAAGTCGCCAGCGAAAATAAAATAACCCAGAAGAACACGTGGGAGCTTAAGCTTATCGATCATCTTAGCGACATTATTAAGGTTGGAACAGAAAATGGCGCGGAGACTAATTTTCAAAAGGCAAGTTGCACACTGGAAGCCGGGTTGAAAATCTACTCGGCGAGGGTGGATTCATTGCACGCTGAGGCATATAAGGTCCTAAGTGGGATGAATCGAGCTCGTCTTGAAGATGAACAAGTAACTACGACGGAGGATGGCCATGTCAGCAACAAGCAGGGTAGGGAGAAAGAGTCAGAGAGGAAGATAGATCCAATGTCGACAGTGGAATCCTCCTTTGAAGCTCTTAACATAAAGAAGTTTGATGTCACATTGGTGGCGGATCCTCTATATCATCAAACGTTTGCACAGTTGGATGAAGGTGGAGCCAAGGGTCTGCTACTGAATAACCTTGGAGCATATGGAGGATGCCAGGTGCTTTCTGATGCGTACGAAGTTCCAGGGAAGTGCAGATCATGTTCATTGCAAAGTACTGCCTTGGAATTGATTGATCTCTCTTTTGCCAAAGAATCTGTTGAGCAGATGGTGGTGGGCATACGCGCAAAGACTGAAATATGTCCTACTCTCAAGGAGATATTTTGCCAATTTGATGAAAATAATCATCGATCATCTCCAGATTTTAATATAAGCCAGAATGCAGATCTCAAAACGGATCCCTTCAATGCTGCGGACTATTACACATCGAACATTGATCATAATGATAATATGGGTGGTGATCATGAGAATAATAGTTTCGGAGATCCTTCATTTCAAAGTCATCATGAGGATAATAACTCCCATACATCATATGAAGCGGATGTGGATGACAGATTTGAGAAAGTTTCTATGTTTTTGTTTCAAGGTTTGAGATTAAAGGAAAATTCATGGGCTGGTCCTCATCACTGGAAGTATTGGAGGTCTAAGGGTTCGGAGGAAGCTCCTGCCACTCGAAGCAGACCAGCTACTAATATATCAAAGAACAAAAACTATAAGGAAGTTGAGCTTGATTTCACAGCATCTCTAGACAACGAAATTCCAAATATCTTTGCTGTGCCAAAAAAATTCAAGTCTTCACTCCTACCTGCAAATCGAATACCTGTCAGTAACAGGCTTCCAGATGACTACCATTATAAACCTGAGAATCTTGTCAAGTTGTTTCTTCTTCCCAATGTTCTGTGCCTTGGGAAGACAAGACAACAGCATACAGATTATAACTCCTGGAAACAAAGTCACAAGTTTGATGAAGCACTGCCACCATGGGACGATGAGAGTGTGCTTAGTGGCCAATATGATGATGGATGTATTCATAGCGATGTAGAAGACTCGGATACTCTTGTCTCTCCACCTCGTCAGGTAAGCAACATTGAAGTTCGGTACGACAGAACTTCAAAACAAGTTGATGTTCATGCATTGAAGGAAACTCTGTGGGGTCATATGCAAGAATCTGCCAGATTTGCTACTGCGAAGGAATTCAAAGACACCATATCCTTCAAGTATGTCCTGGCTACCTTTCCTGTCAATTGCCGAGCTGCAGCGGCTCAGGATATCACGCCCCATTTGTGTTTCATCTGCCTTTTGCATCTAGCTAATGACCGCGGGCTAAGCATAGATGACTGCCCAACTTTAGATGACATGAACATTCATCTTCCATCTCGTCGAATCTCAGATGGAGTGGACCAGCCCTCATCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd2

Protein Analysis

661

Amino Acids

73.94

Weight (kDa)

5.5

Isoelectric Point (pI)

46.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cnd2	PF05786	25 - 362	3.7e-57	Condensin complex subunit 2
Cnd2	PF05786	324 - 535	6.7e-16	Condensin complex subunit 2
Cnd2	PF05786	535 - 644	9.1e-22	Condensin complex subunit 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32590
fragaria_vesca	FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_6g42730 FvH4_6g42730 FvH4_6g42730
malus_domestica	MD03G1195600.v1.1 MD03G1195700.v1.1 MD09G1071300.v1.1 MD11G1212100.v1.1 MD17G1101300.v1.1
prunus_persica	Prupe.3G213700_v2.0.a1 Prupe.4G220400_v2.0.a1
pyrus_communis	pycom03g14790 pycom09g03480 pycom17g09560 pycom17g09570
rosa_chinensis	RchiOBHm_Chr2g0158621 RchiOBHm_Chr5g0041001
rosa_laevigata	RLG00000021100 RLG00000034019
rosa_multiflora	Rmu_co8379437.1_g000001 Rmu_sc0005650.1_g000010 Rmu_sc0030339.1_g000001 Rmu_sc0040010.1_g000001 Rmu_sc0042494.1_g000001 Rmu_ssc0000284.1_g000007
rosa_roxburghii	Rroxscaffold_1G00039700 Rroxscaffold_2G00091170
rosa_rugosa	Rorug02G0471000 Rorug05G0189400
rosa_samantha	Rh2AG536600 Rh2BG549700 Rh2CG520300 Rh2DG559400 Rh5AG274600 Rh5BG279900 Rh5CG312000 Rh5DG287900
rosa_wichuraiana	Rw2G044420 Rw5G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	233, 1422, 1503
Acc36I	ACCTGC	1 cut(s)	1381
AccBSI	CCGCTC	1 cut(s)	185
AccI	GTMKAC	2 cut(s)	53, 572
AccII	CGCG	5 cut(s)	138, 147, 356, 852, 1887
AclI	AACGTT	1 cut(s)	653
AclWI	GGATC	6 cut(s)	557, 629, 642, 959, 972, 1046
AcoI	YGGCCR	2 cut(s)	511, 1573
AcsI	RAATTY	4 cut(s)	1171, 1323, 1352, 1760
AcvI	CACGTG	1 cut(s)	294
AcyI	GRCGYC	1 cut(s)	50
AfaI	GTAC	4 cut(s)	46, 743, 784, 1667
AflII	CTTAAG	1 cut(s)	302
AflIII	ACRYGT	2 cut(s)	136, 291
AjnI	CCWGG	4 cut(s)	723, 751, 1508, 1791
AleI	CACNNNNGTG	1 cut(s)	626
Alw21I	GWGCWC	2 cut(s)	130, 475
Alw26I	GTCTC	3 cut(s)	218, 353, 1633
Alw44I	GTGCAC	1 cut(s)	126
AlwI	GGATC	6 cut(s)	557, 629, 642, 959, 972, 1046
AoxI	GGCC	2 cut(s)	511, 1573
ApaLI	GTGCAC	1 cut(s)	126
ApeKI	GCWGC	3 cut(s)	977, 1820, 1823
ApoI	RAATTY	4 cut(s)	1171, 1323, 1352, 1760
Asp700I	GAANNNNTTC	1 cut(s)	1760
AspLEI	GCGC	3 cut(s)	149, 356, 854
AspS9I	GGNCC	3 cut(s)	451, 1184, 1966
AsuC2I	CCSGG	1 cut(s)	397
AsuHPI	GGTGA	1 cut(s)	1037
AvaII	GGWCC	3 cut(s)	451, 1184, 1966
BaeGI	GKGCMC	1 cut(s)	130
BaeI	ACNNNNGTAYC	2 cut(s)	1611, 1644
BalI	TGGCCA	2 cut(s)	513, 1575
BamHI	GGATCC	2 cut(s)	634, 964
BanII	GRGCYC	2 cut(s)	104, 475
BbrPI	CACGTG	1 cut(s)	294
BbsI	GAAGAC	3 cut(s)	1353, 1484, 1617
Bbv12I	GWGCWC	2 cut(s)	130, 475
BbvCI	CCTCAGC	1 cut(s)	438
BbvI	GCAGC	3 cut(s)	964, 1807, 1835
BccI	CCATC	5 cut(s)	503, 829, 1580, 1948, 1952
BceAI	ACGGC	3 cut(s)	48, 63, 72
BciT130I	CCWGG	4 cut(s)	725, 753, 1510, 1793
BciVI	GTATCC	1 cut(s)	1612
BclI	TGATCA	2 cut(s)	1003, 1027
BcnI	CCSGG	1 cut(s)	397
BcoDI	GTCTC	3 cut(s)	218, 353, 1633
BfaI	CTAG	2 cut(s)	1313, 1874
BfmI	CTRYAG	2 cut(s)	174, 1821
BfrI	CTTAAG	1 cut(s)	302
BfuAI	ACCTGC	1 cut(s)	1381
BfuI	GTATCC	1 cut(s)	1612
BglII	AGATCT	1 cut(s)	952
BisI	GCNGC	7 cut(s)	150, 153, 171, 978, 1821, 1824, 1827
BlpI	GCTNAGC	1 cut(s)	1892
BlsI	GCNGC	7 cut(s)	151, 154, 172, 979, 1822, 1825, 1828
BmcAI	AGTACT	1 cut(s)	784
Bme1390I	CCNGG	5 cut(s)	397, 725, 753, 1510, 1793
Bme18I	GGWCC	3 cut(s)	451, 1184, 1966
BmgT120I	GGNCC	3 cut(s)	451, 1184, 1966
BmiI	GGNNCC	4 cut(s)	103, 636, 679, 966
BmrFI	CCNGG	5 cut(s)	397, 725, 753, 1510, 1793
BmsI	GCATC	4 cut(s)	710, 727, 1316, 1879
BpiI	GAAGAC	3 cut(s)	1353, 1484, 1617
BpmI	CTGGAG	1 cut(s)	909
Bpu10I	CCTNAGC	2 cut(s)	438, 1830
Bpu1102I	GCTNAGC	1 cut(s)	1892
BpuEI	CTTGAG	1 cut(s)	863
BpuMI	CCSGG	1 cut(s)	397
Bsa29I	ATCGAT	2 cut(s)	312, 916
BsaAI	YACGTR	1 cut(s)	294
BsaHI	GRCGYC	1 cut(s)	50
BsaJI	CCNNGG	8 cut(s)	38, 681, 703, 752, 789, 1471, 1547, 1885
BsaXI	ACNNNNNCTCC	2 cut(s)	530, 560
Bse1I	ACTGG	3 cut(s)	81, 393, 1199
Bse3DI	GCAATG	3 cut(s)	18, 428, 773
BseBI	CCWGG	4 cut(s)	725, 753, 1510, 1793
BseCI	ATCGAT	2 cut(s)	312, 916
BseDI	CCNNGG	8 cut(s)	38, 681, 703, 752, 789, 1471, 1547, 1885
BseGI	GGATG	7 cut(s)	468, 514, 673, 725, 1114, 1120, 1595
BseMI	GCAATG	3 cut(s)	18, 428, 773
BseMII	CTCAG	5 cut(s)	229, 429, 1419, 1844, 1968
BseNI	ACTGG	3 cut(s)	81, 393, 1199
BseRI	GAGGAG	1 cut(s)	55
BseSI	GKGCMC	1 cut(s)	130
BseXI	GCAGC	3 cut(s)	964, 1807, 1835
BsgI	GTGCAG	1 cut(s)	781
Bsh1236I	CGCG	5 cut(s)	138, 147, 356, 852, 1887
Bsh1285I	CGRYCG	1 cut(s)	208
BshFI	GGCC	2 cut(s)	513, 1575
BshVI	ATCGAT	2 cut(s)	312, 916
BsiEI	CGRYCG	1 cut(s)	208
BsiHKAI	GWGCWC	2 cut(s)	130, 475
BsiSI	CCGG	2 cut(s)	200, 396
BsiWI	CGTACG	1 cut(s)	741
BslFI	GGGAC	2 cut(s)	51, 1565
BsmAI	GTCTC	3 cut(s)	218, 353, 1633
BsmFI	GGGAC	2 cut(s)	51, 1565
BsmI	GAATGC	1 cut(s)	952
BsnI	GGCC	2 cut(s)	513, 1575
Bsp1286I	GDGCHC	3 cut(s)	104, 130, 475
Bsp1720I	GCTNAGC	1 cut(s)	1892
Bsp19I	CCATGG	1 cut(s)	1547
BspANI	GGCC	2 cut(s)	513, 1575
BspCNI	CTCAG	5 cut(s)	228, 430, 1420, 1843, 1967
BspDI	ATCGAT	2 cut(s)	312, 916
BspFNI	CGCG	5 cut(s)	138, 147, 356, 852, 1887
BspHI	TCATGA	2 cut(s)	1030, 1072
BspLI	GGNNCC	4 cut(s)	103, 636, 679, 966
BspMAI	CTGCAG	1 cut(s)	1825
BspMI	ACCTGC	1 cut(s)	1381
BspPI	GGATC	6 cut(s)	557, 629, 642, 959, 972, 1046
BspTI	CTTAAG	1 cut(s)	302
BsrBI	CCGCTC	1 cut(s)	185
BsrDI	GCAATG	3 cut(s)	18, 428, 773
BsrI	ACTGG	3 cut(s)	81, 393, 1199
BssECI	CCNNGG	8 cut(s)	38, 681, 703, 752, 789, 1471, 1547, 1885
BssNI	GRCGYC	1 cut(s)	50
BssT1I	CCWWGG	5 cut(s)	681, 703, 789, 1471, 1547
Bst2UI	CCWGG	4 cut(s)	725, 753, 1510, 1793
Bst4CI	ACNGT	3 cut(s)	178, 577, 663
BstACI	GRCGYC	1 cut(s)	50
BstAFI	CTTAAG	1 cut(s)	302
BstBAI	YACGTR	1 cut(s)	294
BstC8I	GCNNGC	7 cut(s)	30, 61, 136, 145, 265, 435, 1889
BstDSI	CCRYGG	2 cut(s)	1547, 1885
BstF5I	GGATG	7 cut(s)	468, 514, 673, 725, 1114, 1120, 1595
BstFNI	CGCG	5 cut(s)	138, 147, 356, 852, 1887
BstHHI	GCGC	3 cut(s)	149, 356, 854
BstMAI	GTCTC	3 cut(s)	218, 353, 1633
BstMCI	CGRYCG	1 cut(s)	208
BstMWI	GCNNNNNNNGC	9 cut(s)	34, 56, 140, 144, 149, 519, 1745, 1826, 1893
BstNI	CCWGG	4 cut(s)	725, 753, 1510, 1793
BstSCI	CCNGG	5 cut(s)	395, 723, 751, 1508, 1791
BstSFI	CTRYAG	2 cut(s)	174, 1821
BstSLI	GKGCMC	1 cut(s)	130
BstUI	CGCG	5 cut(s)	138, 147, 356, 852, 1887
BstV1I	GCAGC	3 cut(s)	964, 1807, 1835
BstV2I	GAAGAC	3 cut(s)	1353, 1484, 1617
BstX2I	RGATCY	5 cut(s)	562, 634, 952, 964, 1051
BstYI	RGATCY	5 cut(s)	562, 634, 952, 964, 1051
Bsu15I	ATCGAT	2 cut(s)	312, 916
BsuI	GTATCC	1 cut(s)	1612
BsuRI	GGCC	2 cut(s)	513, 1575
BsuTUI	ATCGAT	2 cut(s)	312, 916
BtgI	CCRYGG	2 cut(s)	1547, 1885
BtgZI	GCGATG	1 cut(s)	1617
BtsCI	GGATG	7 cut(s)	468, 514, 673, 725, 1114, 1120, 1595
BtsI	GCAGTG	1 cut(s)	1538
BtsIMutI	CAGTG	4 cut(s)	386, 582, 1192, 1538
BveI	ACCTGC	1 cut(s)	1381
Cac8I	GCNNGC	7 cut(s)	30, 61, 136, 145, 265, 435, 1889
CciI	TCATGA	2 cut(s)	1030, 1072
CfoI	GCGC	3 cut(s)	149, 356, 854
Cfr13I	GGNCC	3 cut(s)	451, 1184, 1966
Cfr42I	CCGCGG	1 cut(s)	1888
ClaI	ATCGAT	2 cut(s)	312, 916
CseI	GACGC	1 cut(s)	39
Csp6I	GTAC	4 cut(s)	45, 742, 783, 1666
CviAII	CATG	8 cut(s)	515, 768, 1031, 1073, 1176, 1548, 1697, 1924
CviQI	GTAC	4 cut(s)	45, 742, 783, 1666
EaeI	YGGCCR	2 cut(s)	511, 1573
EciI	GGCGGA	2 cut(s)	20, 647
Ecl136II	GAGCTC	1 cut(s)	473
Eco130I	CCWWGG	5 cut(s)	681, 703, 789, 1471, 1547
Eco24I	GRGCYC	2 cut(s)	104, 475
Eco32I	GATATC	1 cut(s)	1837
Eco47I	GGWCC	3 cut(s)	451, 1184, 1966
Eco53kI	GAGCTC	1 cut(s)	473
Eco72I	CACGTG	1 cut(s)	294
EcoICRI	GAGCTC	1 cut(s)	473
EcoO109I	RGGNCCY	1 cut(s)	451
EcoRI	GAATTC	1 cut(s)	1760
EcoRII	CCWGG	4 cut(s)	723, 751, 1508, 1791
EcoRV	GATATC	1 cut(s)	1837
EcoT14I	CCWWGG	5 cut(s)	681, 703, 789, 1471, 1547
EcoT22I	ATGCAT	1 cut(s)	1702
EcoT38I	GRGCYC	2 cut(s)	104, 475
ErhI	CCWWGG	5 cut(s)	681, 703, 789, 1471, 1547
FaeI	CATG	8 cut(s)	518, 771, 1034, 1076, 1179, 1551, 1700, 1927
FalI	AAGNNNNNCTT	2 cut(s)	1278, 1310
FaqI	GGGAC	2 cut(s)	51, 1565
FatI	CATG	8 cut(s)	514, 767, 1030, 1072, 1175, 1547, 1696, 1923
FauI	CCCGC	1 cut(s)	1880
FauNDI	CATATG	3 cut(s)	712, 1099, 1725
FbaI	TGATCA	2 cut(s)	1003, 1027
FblI	GTMKAC	2 cut(s)	53, 572
Fnu4HI	GCNGC	7 cut(s)	150, 153, 171, 978, 1821, 1824, 1827
FokI	GGATG	7 cut(s)	475, 521, 680, 732, 1121, 1127, 1602
FriOI	GRGCYC	2 cut(s)	104, 475
Fsp4HI	GCNGC	7 cut(s)	150, 153, 171, 978, 1821, 1824, 1827
FspBI	CTAG	2 cut(s)	1313, 1874
GlaI	GCGC	3 cut(s)	148, 355, 853
GluI	GCNGC	7 cut(s)	150, 153, 171, 978, 1821, 1824, 1827
GsuI	CTGGAG	1 cut(s)	909
HaeIII	GGCC	2 cut(s)	513, 1575
HapII	CCGG	2 cut(s)	200, 396
HgaI	GACGC	1 cut(s)	39
HhaI	GCGC	3 cut(s)	149, 356, 854
Hin1I	GRCGYC	1 cut(s)	50
Hin1II	CATG	8 cut(s)	518, 771, 1034, 1076, 1179, 1551, 1700, 1927
Hin6I	GCGC	3 cut(s)	147, 354, 852
HinP1I	GCGC	3 cut(s)	147, 354, 852
HincII	GTYRAC	2 cut(s)	54, 573
HindII	GTYRAC	2 cut(s)	54, 573
HindIII	AAGCTT	1 cut(s)	305
HpaII	CCGG	2 cut(s)	200, 396
HphI	GGTGA	1 cut(s)	1037
Hpy166II	GTNNAC	4 cut(s)	54, 128, 573, 1966
Hpy188I	TCNGA	6 cut(s)	550, 736, 1049, 1222, 1618, 1957
Hpy188III	TCNNGA	8 cut(s)	245, 479, 926, 1031, 1073, 1313, 1406, 1832
Hpy8I	GTNNAC	4 cut(s)	54, 128, 573, 1966
Hpy99I	CGWCG	6 cut(s)	55, 58, 113, 165, 505, 1950
HpyAV	CCTTC	6 cut(s)	665, 979, 1065, 1699, 1750, 1789
HpyCH4III	ACNGT	3 cut(s)	178, 577, 663
HpyCH4IV	ACGT	3 cut(s)	124, 293, 653
HpyF10VI	GCNNNNNNNGC	9 cut(s)	34, 56, 140, 144, 149, 519, 1745, 1826, 1893
HpySE526I	ACGT	3 cut(s)	124, 293, 653
Hsp92I	GRCGYC	1 cut(s)	50
Hsp92II	CATG	8 cut(s)	518, 771, 1034, 1076, 1179, 1551, 1700, 1927
HspAI	GCGC	3 cut(s)	147, 354, 852
Ksp22I	TGATCA	2 cut(s)	1003, 1027
KspI	CCGCGG	1 cut(s)	1888
LmnI	GCTCC	5 cut(s)	107, 298, 677, 707, 1234
Lsp1109I	GCAGC	3 cut(s)	964, 1807, 1835
LweI	GCATC	4 cut(s)	710, 727, 1316, 1879
MaeI	CTAG	2 cut(s)	1313, 1874
MaeII	ACGT	3 cut(s)	124, 293, 653
MaeIII	GTNAC	4 cut(s)	493, 619, 1394, 1520
MbiI	CCGCTC	1 cut(s)	185
MfeI	CAATTG	1 cut(s)	1810
MflI	RGATCY	5 cut(s)	562, 634, 952, 964, 1051
MhlI	GDGCHC	3 cut(s)	104, 130, 475
MlsI	TGGCCA	2 cut(s)	513, 1575
MluCI	AATT	8 cut(s)	364, 794, 896, 1171, 1323, 1352, 1760, 1810
MluI	ACGCGT	1 cut(s)	136
MluNI	TGGCCA	2 cut(s)	513, 1575
MlyI	GAGTC	3 cut(s)	25, 554, 1607
MmeI	TCCRAC	3 cut(s)	129, 319, 645
Mox20I	TGGCCA	2 cut(s)	513, 1575
Mph1103I	ATGCAT	1 cut(s)	1702
MroXI	GAANNNNTTC	1 cut(s)	1760
MscI	TGGCCA	2 cut(s)	513, 1575
MseI	TTAA	5 cut(s)	303, 333, 600, 933, 1163
MslI	CAYNNNNRTG	2 cut(s)	626, 1602
Msp20I	TGGCCA	2 cut(s)	513, 1575
MspA1I	CMGCKG	2 cut(s)	1826, 1887
MspCI	CTTAAG	1 cut(s)	302
MspI	CCGG	2 cut(s)	200, 396
MspR9I	CCNGG	5 cut(s)	397, 725, 753, 1510, 1793
MunI	CAATTG	1 cut(s)	1810
Mva1269I	GAATGC	1 cut(s)	952
MvaI	CCWGG	4 cut(s)	725, 753, 1510, 1793
MvnI	CGCG	5 cut(s)	138, 147, 356, 852, 1887
MwoI	GCNNNNNNNGC	9 cut(s)	34, 56, 140, 144, 149, 519, 1745, 1826, 1893
NciI	CCSGG	1 cut(s)	397
NcoI	CCATGG	1 cut(s)	1547
NdeI	CATATG	3 cut(s)	712, 1099, 1725
NlaIII	CATG	8 cut(s)	518, 771, 1034, 1076, 1179, 1551, 1700, 1927
NlaIV	GGNNCC	4 cut(s)	103, 636, 679, 966
NmeAIII	GCCGAG	3 cut(s)	63, 392, 1841
NmuCI	GTSAC	2 cut(s)	619, 1520
NsiI	ATGCAT	1 cut(s)	1702
OliI	CACNNNNGTG	1 cut(s)	626
PagI	TCATGA	2 cut(s)	1030, 1072
PcsI	WCGNNNNNNNCGW	1 cut(s)	117
PctI	GAATGC	1 cut(s)	952
PdmI	GAANNNNTTC	1 cut(s)	1760
PfeI	GAWTC	7 cut(s)	425, 466, 581, 821, 1432, 1733, 1950
Pfl23II	CGTACG	1 cut(s)	741
PfoI	TCCNGGA	1 cut(s)	1508
PkrI	GCNGC	7 cut(s)	151, 154, 172, 979, 1822, 1825, 1828
Ple19I	CGATCG	1 cut(s)	208
PleI	GAGTC	3 cut(s)	24, 553, 1607
PmaCI	CACGTG	1 cut(s)	294
PmlI	CACGTG	1 cut(s)	294
PpsI	GAGTC	3 cut(s)	24, 553, 1607
Ppu21I	YACGTR	1 cut(s)	294
PpuMI	RGGWCCY	1 cut(s)	451
PsiI	TTATAA	3 cut(s)	233, 1422, 1503
Psp124BI	GAGCTC	1 cut(s)	475
Psp1406I	AACGTT	1 cut(s)	653
Psp5II	RGGWCCY	1 cut(s)	451
Psp6I	CCWGG	4 cut(s)	723, 751, 1508, 1791
PspCI	CACGTG	1 cut(s)	294
PspGI	CCWGG	4 cut(s)	723, 751, 1508, 1791
PspLI	CGTACG	1 cut(s)	741
PspN4I	GGNNCC	4 cut(s)	103, 636, 679, 966
PspPI	GGNCC	3 cut(s)	451, 1184, 1966
PspPPI	RGGWCCY	1 cut(s)	451
PstI	CTGCAG	1 cut(s)	1825
PsuI	RGATCY	5 cut(s)	562, 634, 952, 964, 1051
PvuI	CGATCG	1 cut(s)	208
RsaI	GTAC	4 cut(s)	46, 743, 784, 1667
RsaNI	GTAC	4 cut(s)	45, 742, 783, 1666
RseI	CAYNNNNRTG	2 cut(s)	626, 1602
SacI	GAGCTC	1 cut(s)	475
SacII	CCGCGG	1 cut(s)	1888
SalI	GTCGAC	2 cut(s)	52, 571
SaqAI	TTAA	5 cut(s)	303, 333, 600, 933, 1163
SatI	GCNGC	7 cut(s)	150, 153, 171, 978, 1821, 1824, 1827
Sau96I	GGNCC	3 cut(s)	451, 1184, 1966
ScaI	AGTACT	1 cut(s)	784
SchI	GAGTC	3 cut(s)	25, 554, 1607
ScrFI	CCNGG	5 cut(s)	397, 725, 753, 1510, 1793
SduI	GDGCHC	3 cut(s)	104, 130, 475
SfaNI	GCATC	4 cut(s)	710, 727, 1316, 1879
SfcI	CTRYAG	2 cut(s)	174, 1821
Sfr303I	CCGCGG	1 cut(s)	1888
SgrBI	CCGCGG	1 cut(s)	1888
SgrDI	CGTCGACG	1 cut(s)	52
SinI	GGWCC	3 cut(s)	451, 1184, 1966
SmiMI	CAYNNNNRTG	2 cut(s)	626, 1602
SmlI	CTYRAG	2 cut(s)	302, 878
SmoI	CTYRAG	2 cut(s)	302, 878
Sse9I	AATT	8 cut(s)	364, 794, 896, 1171, 1323, 1352, 1760, 1810
SspMI	CTAG	2 cut(s)	1313, 1874
SstI	GAGCTC	1 cut(s)	475
StyD4I	CCNGG	5 cut(s)	395, 723, 751, 1508, 1791
StyI	CCWWGG	5 cut(s)	681, 703, 789, 1471, 1547
TaaI	ACNGT	3 cut(s)	178, 577, 663
TaiI	ACGT	3 cut(s)	127, 296, 656
TasI	AATT	8 cut(s)	364, 794, 896, 1171, 1323, 1352, 1760, 1810
TatI	WGTACW	1 cut(s)	782
TauI	GCSGC	4 cut(s)	152, 155, 173, 1829
TfiI	GAWTC	7 cut(s)	425, 466, 581, 821, 1432, 1733, 1950
Tru1I	TTAA	5 cut(s)	303, 333, 600, 933, 1163
Tru9I	TTAA	5 cut(s)	303, 333, 600, 933, 1163
TscAI	CASTG	4 cut(s)	393, 582, 1199, 1545
TseFI	GTSAC	2 cut(s)	619, 1520
TseI	GCWGC	3 cut(s)	977, 1820, 1823
Tsp45I	GTSAC	2 cut(s)	619, 1520
TspGWI	ACGGA	2 cut(s)	518, 977
TspRI	CASTG	4 cut(s)	393, 582, 1199, 1545
Vha464I	CTTAAG	1 cut(s)	302
VneI	GTGCAC	1 cut(s)	126
VpaK11BI	GGWCC	3 cut(s)	451, 1184, 1966
XapI	RAATTY	4 cut(s)	1171, 1323, 1352, 1760
XbaI	TCTAGA	1 cut(s)	1312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1583
XmiI	GTMKAC	2 cut(s)	53, 572
XmnI	GAANNNNTTC	1 cut(s)	1760
XspI	CTAG	2 cut(s)	1313, 1874
ZrmI	AGTACT	1 cut(s)	784
Zsp2I	ATGCAT	1 cut(s)	1702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.