Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002141

Physical Location & Seq

Genomic Coordinates Forward (+)

4923793 .. 4928159

Gene Structure 4367 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1071300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGCCGACACTCTGAGCCCTAATCCGGCAACCCAAAAGCAGAGGCTCCCAATAGCCGCTCGTCTCCAGTCTCCAACGAGCCCCTTCTTCCTCGGCTCCAACGACGACCACCGCGAGCGTGCGCAGGCTCGCGCAGCACGCGCCGCGGCGATAAGAAGAAAGTCCATTGCGCTCAATCTGCCGCCACAGCAGGGCGACCCCGATCCCGGCCTCGGCAAGGAGCAGATCCTCGAGCTGTTCCAGAATTGCATCAAACTTGCCAGTGAAAATAAAATTAATCAGAAAAATACATGGGAGCTGAATTTGATAGACCATTTAACGGATATTATTAAGGTTGAAGAGGAAAACGATGCAGAGACGAATTTTCAAAAGGCAAGCTGCACTCTTGAAGCTGGAGTCAAAATTTACTCAATGAGGGTGGATTCAGTACACTCTGAGGCATATAAGGTCCTTGGTGGGATGAATAGAGCAGGCCAAGAAGACGAACAAGATACCAGTGCAGAGGATGCCAATGCTGACAATGGAAAAGATGCGGCTAATTCCAAGCATGAGACGCAGAAAAAGATATCTCCCTTATCAACGCTGGAATCATCTTTTGAGGCTCTAAATGTGAAAAAGTTTGACGTTGCATTTGCAGTTGATCCCCTCTATCATCAGACGTCTGCACAATTTGATGAAGGTGGGGCCAAGGGTCTTTTAATGAATAATCTTGGAGTGTATGCTGGATGCAGAGTGCTCTTTGATTCTTCCGAAGTACCAGGGAAGTGCATAGCATCTGATAATCAACTCGATAAATCAGATACCATTGATCTTTCTTTTGCTAGTGAATATGTAGAACAGATGGTATTGAACATGCGAATCAAAGATGAAATTTCACCAACTCTCAGGAGTTTAGTTGATCGATTTGATGAGGATAACAGAAGGCCACCAGATATATATACATGTGATCAAGAATCAGCAGAGCAAGTTGATGCTGCCTATAACAATGAAGCTGATTTTGATTGTGATGTATCTGAGAATTGCGGGAACTGGGATTATGATCATGATGACCAAACAAGTGTCGTGGAGGAGGGCCTTAACTGTGAAAGTTCAACTCTCCCTAGTTATCATGAGGAAAATGAACCGGGTGCCTACCATGAACTTGATACGAATGAGAGACTTGAGAAAATTGATGGGTATTTGTTCTTAAGTCTTGGATTTACTTCAAAACAAAATGCTTGGGCAGGTCCTGATCATTGGAAGTATCGAAAAACTAAAGTTCCCGAGAATGATCCTCCTGCAGAACAACCAGAAACAGCTAAACAAAAGAAGACCAAAGCACAGCAGGATCTTGATTTCACAAAATCCTTGGAAGAAGAGTTCTCAGATATTTTTGCTCCTCCCAAAAATCCAAAATCCTTACTGCTCCCTGCAAATAGAGCACCCTGTAATACAAAACTTCCTGAGGATTGCCACTATCAACCAGAGGAGCTTATAAAGCTATTTCTTCTACCTCAAGTAAAGTGCCTTGGAAGGCGATGCAGGAAGTCCTCAGATGAATCCGGGCAACAATGTGACGATGATGGGCAATTTCCATACTACGATGATGAAAGTGGACTTGGGGGCCAATATGATGACGGAAATATCCATAGTGATGTGGAGGACTTTAGCACACTTGTTTCTCAGCCTCGCCAGGTAAACAAAATTGAAGTCCAGTATGACAAGACTTCCAAACAAGTCGATGTCCAGGTTTTGAAAGAAACTCTTTGGAACCATGTACAAGAATCTGTTCAAACATCAATCCAGGGTGAAGAACAATTGGTATCCTTCAAGCAAATGTTGGGCAACTTTCCGGGTGACTGCAGGGCTGCTGAAACTATCAATGACATCTCCCCTCACCTGTGTTTCATCTGCCTTCTACATTTGGCCAATGAGCATGGTTTGAGGATCCTGGGCTCCACCAGTCTGGATGATCTCAGCATTCACCTTACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000793 GO:0000794 GO:0000796 GO:0000799 GO:0000819 GO:0001671 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006323 GO:0006996 GO:0007049 GO:0007059 GO:0007076 GO:0008047 GO:0008150 GO:0009987 GO:0010911 GO:0010912 GO:0016043 GO:0019899 GO:0022402 GO:0030234 GO:0030261 GO:0031974 GO:0031981 GO:0032781 GO:0032991 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044547 GO:0044815 GO:0048285 GO:0050790 GO:0051276 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0071103 GO:0071840 GO:0072586 GO:0072587 GO:0098772 GO:0098813 GO:0140014 GO:1903047 GO:2000371 GO:2000373

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd2

Protein Analysis

658

Amino Acids

73.56

Weight (kDa)

4.64

Isoelectric Point (pI)

44.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cnd2	PF05786	27 - 542	1.4e-87	Condensin complex subunit 2
Cnd2	PF05786	540 - 654	2.1e-25	Condensin complex subunit 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32590
fragaria_vesca	FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_6g42730 FvH4_6g42730 FvH4_6g42730
malus_domestica	MD03G1195600.v1.1 MD03G1195700.v1.1 MD09G1071300.v1.1 MD11G1212100.v1.1 MD17G1101300.v1.1
prunus_persica	Prupe.3G213700_v2.0.a1 Prupe.4G220400_v2.0.a1
pyrus_communis	pycom03g14790 pycom09g03480 pycom17g09560 pycom17g09570
rosa_chinensis	RchiOBHm_Chr2g0158621 RchiOBHm_Chr5g0041001
rosa_laevigata	RLG00000021100 RLG00000034019
rosa_multiflora	Rmu_co8379437.1_g000001 Rmu_sc0005650.1_g000010 Rmu_sc0030339.1_g000001 Rmu_sc0040010.1_g000001 Rmu_sc0042494.1_g000001 Rmu_ssc0000284.1_g000007
rosa_roxburghii	Rroxscaffold_1G00039700 Rroxscaffold_2G00091170
rosa_rugosa	Rorug02G0471000 Rorug05G0189400
rosa_samantha	Rh2AG536600 Rh2BG549700 Rh2CG520300 Rh2DG559400 Rh5AG274600 Rh5BG279900 Rh5CG312000 Rh5DG287900
rosa_wichuraiana	Rw2G044420 Rw5G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1475
AatII	GACGTC	1 cut(s)	662
Acc16I	TGCGCA	1 cut(s)	123
Acc36I	ACCTGC	1 cut(s)	1214
AccB1I	GGYRCC	1 cut(s)	1127
AccBSI	CCGCTC	1 cut(s)	59
AccII	CGCG	4 cut(s)	114, 132, 141, 146
AciI	CCGC	7 cut(s)	57, 112, 144, 146, 182, 533, 1023
AclWI	GGATC	7 cut(s)	197, 220, 635, 1265, 1335, 1921, 1934
AcoI	YGGCCR	2 cut(s)	3, 1905
AcsI	RAATTY	4 cut(s)	301, 361, 402, 870
AcyI	GRCGYC	1 cut(s)	659
AfaI	GTAC	3 cut(s)	429, 756, 1758
AfiI	CCNNNNNNNGG	6 cut(s)	25, 191, 206, 212, 217, 319
AflII	CTTAAG	1 cut(s)	1186
AflIII	ACRYGT	1 cut(s)	941
AjnI	CCWGG	5 cut(s)	757, 1671, 1725, 1782, 1929
AjuI	GAANNNNNNNTTGG	2 cut(s)	1581, 1613
AloI	GAACNNNNNNTCC	2 cut(s)	1343, 1375
AluBI	AGCT	8 cut(s)	235, 298, 378, 392, 992, 1298, 1471, 1480
AluI	AGCT	8 cut(s)	235, 298, 378, 392, 992, 1298, 1471, 1480
Alw21I	GWGCWC	2 cut(s)	738, 1423
Alw26I	GTCTC	5 cut(s)	68, 75, 350, 545, 1150
AlwI	GGATC	7 cut(s)	197, 220, 635, 1265, 1335, 1921, 1934
AlwNI	CAGNNNCTG	1 cut(s)	1229
Ama87I	CYCGRG	2 cut(s)	230, 1262
AoxI	GGCC	8 cut(s)	3, 208, 472, 684, 923, 1072, 1603, 1905
ApeKI	GCWGC	4 cut(s)	134, 378, 974, 1847
ApoI	RAATTY	4 cut(s)	301, 361, 402, 870
ArsI	GACNNNNNNTTYG	4 cut(s)	614, 646, 1674, 1706
AseI	ATTAAT	1 cut(s)	276
Asp700I	GAANNNNTTC	1 cut(s)	1767
AspLEI	GCGC	4 cut(s)	124, 134, 143, 172
AspS9I	GGNCC	5 cut(s)	448, 684, 1072, 1226, 1603
AsuC2I	CCSGG	4 cut(s)	207, 1125, 1543, 1833
AsuHPI	GGTGA	5 cut(s)	867, 1799, 1847, 1868, 1955
AvaI	CYCGRG	2 cut(s)	230, 1262
AvaII	GGWCC	2 cut(s)	448, 1226
AxyI	CCTNAGG	1 cut(s)	1443
BalI	TGGCCA	1 cut(s)	1907
BamHI	GGATCC	1 cut(s)	1926
BanI	GGYRCC	1 cut(s)	1127
BanII	GRGCYC	3 cut(s)	20, 83, 1937
BbsI	GAAGAC	2 cut(s)	486, 1316
Bbv12I	GWGCWC	2 cut(s)	738, 1423
BbvI	GCAGC	4 cut(s)	146, 365, 961, 1834
BccI	CCATC	3 cut(s)	835, 1166, 1556
BciT130I	CCWGG	5 cut(s)	759, 1673, 1727, 1784, 1931
BciVI	GTATCC	1 cut(s)	1813
BclI	TGATCA	3 cut(s)	946, 1039, 1231
BcnI	CCSGG	4 cut(s)	207, 1125, 1543, 1833
BcoDI	GTCTC	5 cut(s)	68, 75, 350, 545, 1150
BfaI	CTAG	2 cut(s)	822, 1101
BfmI	CTRYAG	2 cut(s)	1278, 1840
BfrI	CTTAAG	1 cut(s)	1186
BfuAI	ACCTGC	1 cut(s)	1214
BfuI	GTATCC	1 cut(s)	1813
BisI	GCNGC	9 cut(s)	57, 135, 144, 147, 182, 379, 534, 975, 1848
BlsI	GCNGC	9 cut(s)	58, 136, 145, 148, 183, 380, 535, 976, 1849
Bme1390I	CCNGG	9 cut(s)	207, 759, 1125, 1543, 1673, 1727, 1784, 1833, 1931
Bme18I	GGWCC	2 cut(s)	448, 1226
BmeT110I	CYCGRG	2 cut(s)	230, 1262
BmgT120I	GGNCC	5 cut(s)	448, 684, 1072, 1226, 1603
BmiI	GGNNCC	8 cut(s)	47, 97, 685, 1129, 1604, 1751, 1928, 1936
BmrFI	CCNGG	9 cut(s)	207, 759, 1125, 1543, 1673, 1727, 1784, 1833, 1931
BmrI	ACTGGG	1 cut(s)	1039
BmsI	GCATC	8 cut(s)	258, 340, 496, 520, 716, 782, 961, 1508
BmuI	ACTGGG	1 cut(s)	1039
BpiI	GAAGAC	2 cut(s)	486, 1316
BpmI	CTGGAG	2 cut(s)	50, 414
BpuEI	CTTGAG	2 cut(s)	1181, 1479
BpuMI	CCSGG	4 cut(s)	207, 1125, 1543, 1833
Bsa29I	ATCGAT	1 cut(s)	901
BsaBI	GATNNNNATC	1 cut(s)	1038
BsaHI	GRCGYC	1 cut(s)	659
Bsc4I	CCNNNNNNNGG	6 cut(s)	25, 191, 206, 212, 217, 319
Bse1I	ACTGG	6 cut(s)	67, 261, 495, 1034, 1693, 1941
Bse21I	CCTNAGG	1 cut(s)	1443
Bse3DI	GCAATG	1 cut(s)	165
Bse8I	GATNNNNATC	1 cut(s)	1038
BseBI	CCWGG	5 cut(s)	759, 1673, 1727, 1784, 1931
BseCI	ATCGAT	1 cut(s)	901
BseGI	GGATG	4 cut(s)	465, 511, 731, 1954
BseJI	GATNNNNATC	1 cut(s)	1038
BseLI	CCNNNNNNNGG	6 cut(s)	25, 191, 206, 212, 217, 319
BseMI	GCAATG	1 cut(s)	165
BseMII	CTCAG	9 cut(s)	5, 426, 898, 1005, 1377, 1434, 1545, 1676, 1969
BseNI	ACTGG	6 cut(s)	67, 261, 495, 1034, 1693, 1941
BseRI	GAGGAG	3 cut(s)	1082, 1368, 1481
BseXI	GCAGC	4 cut(s)	146, 365, 961, 1834
BsgI	GTGCAG	3 cut(s)	364, 519, 648
Bsh1236I	CGCG	4 cut(s)	114, 132, 141, 146
BshFI	GGCC	8 cut(s)	5, 210, 474, 686, 925, 1074, 1605, 1907
BshNI	GGYRCC	1 cut(s)	1127
BshVI	ATCGAT	1 cut(s)	901
BsiHKAI	GWGCWC	2 cut(s)	738, 1423
BsiHKCI	CYCGRG	2 cut(s)	230, 1262
BsiSI	CCGG	5 cut(s)	26, 207, 1124, 1542, 1832
BslI	CCNNNNNNNGG	6 cut(s)	25, 191, 206, 212, 217, 319
BsmAI	GTCTC	5 cut(s)	68, 75, 350, 545, 1150
BsmBI	CGTCTC	3 cut(s)	68, 350, 545
BsmI	GAATGC	1 cut(s)	1959
BsnI	GGCC	8 cut(s)	5, 210, 474, 686, 925, 1074, 1605, 1907
BsoBI	CYCGRG	2 cut(s)	230, 1262
Bsp1286I	GDGCHC	5 cut(s)	20, 83, 738, 1423, 1937
Bsp1407I	TGTACA	1 cut(s)	1756
BspACI	CCGC	7 cut(s)	57, 112, 144, 146, 182, 533, 1023
BspANI	GGCC	8 cut(s)	5, 210, 474, 686, 925, 1074, 1605, 1907
BspCNI	CTCAG	9 cut(s)	6, 427, 897, 1006, 1376, 1435, 1544, 1675, 1968
BspDI	ATCGAT	1 cut(s)	901
BspFNI	CGCG	4 cut(s)	114, 132, 141, 146
BspHI	TCATGA	2 cut(s)	1042, 1108
BspLI	GGNNCC	8 cut(s)	47, 97, 685, 1129, 1604, 1751, 1928, 1936
BspMAI	CTGCAG	2 cut(s)	1282, 1844
BspMI	ACCTGC	1 cut(s)	1214
BspPI	GGATC	7 cut(s)	197, 220, 635, 1265, 1335, 1921, 1934
BspT107I	GGYRCC	1 cut(s)	1127
BspTI	CTTAAG	1 cut(s)	1186
BsrBI	CCGCTC	1 cut(s)	59
BsrDI	GCAATG	1 cut(s)	165
BsrGI	TGTACA	1 cut(s)	1756
BsrI	ACTGG	6 cut(s)	67, 261, 495, 1034, 1693, 1941
BssNI	GRCGYC	1 cut(s)	659
BssT1I	CCWWGG	4 cut(s)	451, 687, 1347, 1507
Bst2UI	CCWGG	5 cut(s)	759, 1673, 1727, 1784, 1931
Bst4CI	ACNGT	1 cut(s)	1082
Bst6I	CTCTTC	2 cut(s)	333, 1350
BstACI	GRCGYC	1 cut(s)	659
BstAFI	CTTAAG	1 cut(s)	1186
BstAPI	GCANNNNNTGC	1 cut(s)	506
BstAUI	TGTACA	1 cut(s)	1756
BstC8I	GCNNGC	7 cut(s)	116, 120, 126, 130, 139, 376, 472
BstDEI	CTNAG	9 cut(s)	14, 435, 884, 1014, 1363, 1443, 1531, 1662, 1955
BstDSI	CCRYGG	1 cut(s)	144
BstENI	CCTNNNNNAGG	1 cut(s)	215
BstF5I	GGATG	4 cut(s)	465, 511, 731, 1954
BstFNI	CGCG	4 cut(s)	114, 132, 141, 146
BstHHI	GCGC	4 cut(s)	124, 134, 143, 172
BstMAI	GTCTC	5 cut(s)	68, 75, 350, 545, 1150
BstNI	CCWGG	5 cut(s)	759, 1673, 1727, 1784, 1931
BstNSI	RCATGY	2 cut(s)	856, 945
BstSCI	CCNGG	9 cut(s)	205, 757, 1123, 1541, 1671, 1725, 1782, 1831, 1929
BstSFI	CTRYAG	2 cut(s)	1278, 1840
BstUI	CGCG	4 cut(s)	114, 132, 141, 146
BstV1I	GCAGC	4 cut(s)	146, 365, 961, 1834
BstV2I	GAAGAC	2 cut(s)	486, 1316
BstX2I	RGATCY	3 cut(s)	225, 1327, 1926
BstXI	CCANNNNNNTGG	1 cut(s)	1945
BstYI	RGATCY	3 cut(s)	225, 1327, 1926
Bsu15I	ATCGAT	1 cut(s)	901
Bsu36I	CCTNAGG	1 cut(s)	1443
BsuI	GTATCC	1 cut(s)	1813
BsuRI	GGCC	8 cut(s)	5, 210, 474, 686, 925, 1074, 1605, 1907
BsuTUI	ATCGAT	1 cut(s)	901
BtgI	CCRYGG	1 cut(s)	144
BtgZI	GCGATG	1 cut(s)	1531
BtsCI	GGATG	4 cut(s)	465, 511, 731, 1954
BtsIMutI	CAGTG	2 cut(s)	268, 502
BveI	ACCTGC	1 cut(s)	1214
Cac8I	GCNNGC	7 cut(s)	116, 120, 126, 130, 139, 376, 472
CaiI	CAGNNNCTG	1 cut(s)	1229
CciI	TCATGA	2 cut(s)	1042, 1108
CfoI	GCGC	4 cut(s)	124, 134, 143, 172
Cfr13I	GGNCC	5 cut(s)	448, 684, 1072, 1226, 1603
Cfr42I	CCGCGG	1 cut(s)	147
ClaI	ATCGAT	1 cut(s)	901
CseI	GACGC	1 cut(s)	562
Csp6I	GTAC	3 cut(s)	428, 755, 1757
CspCI	CAANNNNNGTGG	4 cut(s)	399, 434, 1044, 1079
CviAII	CATG	9 cut(s)	291, 548, 853, 942, 1043, 1109, 1136, 1754, 1916
CviQI	GTAC	3 cut(s)	428, 755, 1757
DdeI	CTNAG	9 cut(s)	14, 435, 884, 1014, 1363, 1443, 1531, 1662, 1955
EaeI	YGGCCR	2 cut(s)	3, 1905
Eam1104I	CTCTTC	2 cut(s)	333, 1350
EarI	CTCTTC	2 cut(s)	333, 1350
Eco130I	CCWWGG	4 cut(s)	451, 687, 1347, 1507
Eco24I	GRGCYC	3 cut(s)	20, 83, 1937
Eco32I	GATATC	1 cut(s)	567
Eco47I	GGWCC	2 cut(s)	448, 1226
Eco81I	CCTNAGG	1 cut(s)	1443
Eco88I	CYCGRG	2 cut(s)	230, 1262
EcoNI	CCTNNNNNAGG	1 cut(s)	215
EcoO109I	RGGNCCY	3 cut(s)	448, 1072, 1226
EcoRII	CCWGG	5 cut(s)	757, 1671, 1725, 1782, 1929
EcoRV	GATATC	1 cut(s)	567
EcoT14I	CCWWGG	4 cut(s)	451, 687, 1347, 1507
EcoT38I	GRGCYC	3 cut(s)	20, 83, 1937
ErhI	CCWWGG	4 cut(s)	451, 687, 1347, 1507
Esp3I	CGTCTC	3 cut(s)	68, 350, 545
FaeI	CATG	9 cut(s)	294, 551, 856, 945, 1046, 1112, 1139, 1757, 1919
FalI	AAGNNNNNCTT	2 cut(s)	1728, 1760
FatI	CATG	9 cut(s)	290, 547, 852, 941, 1042, 1108, 1135, 1753, 1915
FauI	CCCGC	1 cut(s)	1016
FbaI	TGATCA	3 cut(s)	946, 1039, 1231
Fnu4HI	GCNGC	9 cut(s)	57, 135, 144, 147, 182, 379, 534, 975, 1848
FokI	GGATG	4 cut(s)	472, 518, 738, 1961
FriOI	GRGCYC	3 cut(s)	20, 83, 1937
Fsp4HI	GCNGC	9 cut(s)	57, 135, 144, 147, 182, 379, 534, 975, 1848
FspBI	CTAG	2 cut(s)	822, 1101
FspI	TGCGCA	1 cut(s)	123
GlaI	GCGC	4 cut(s)	123, 133, 142, 171
GluI	GCNGC	9 cut(s)	57, 135, 144, 147, 182, 379, 534, 975, 1848
GsuI	CTGGAG	2 cut(s)	50, 414
HaeIII	GGCC	8 cut(s)	5, 210, 474, 686, 925, 1074, 1605, 1907
HapII	CCGG	5 cut(s)	26, 207, 1124, 1542, 1832
HgaI	GACGC	1 cut(s)	562
HhaI	GCGC	4 cut(s)	124, 134, 143, 172
Hin1I	GRCGYC	1 cut(s)	659
Hin1II	CATG	9 cut(s)	294, 551, 856, 945, 1046, 1112, 1139, 1757, 1919
Hin6I	GCGC	4 cut(s)	122, 132, 141, 170
HinP1I	GCGC	4 cut(s)	122, 132, 141, 170
HinfI	GANTC	8 cut(s)	396, 422, 587, 743, 858, 953, 1538, 1763
HpaII	CCGG	5 cut(s)	26, 207, 1124, 1542, 1832
HphI	GGTGA	5 cut(s)	867, 1799, 1847, 1868, 1955
Hpy166II	GTNNAC	3 cut(s)	430, 1595, 1678
Hpy8I	GTNNAC	3 cut(s)	430, 1595, 1678
Hpy99I	CGWCG	1 cut(s)	107
HpyAV	CCTTC	6 cut(s)	94, 671, 915, 1506, 1816, 1904
HpyCH4III	ACNGT	1 cut(s)	1082
HpyCH4IV	ACGT	2 cut(s)	624, 659
HpyF3I	CTNAG	9 cut(s)	14, 435, 884, 1014, 1363, 1443, 1531, 1662, 1955
HpySE526I	ACGT	2 cut(s)	624, 659
Hsp92I	GRCGYC	1 cut(s)	659
Hsp92II	CATG	9 cut(s)	294, 551, 856, 945, 1046, 1112, 1139, 1757, 1919
HspAI	GCGC	4 cut(s)	122, 132, 141, 170
Ksp22I	TGATCA	3 cut(s)	946, 1039, 1231
KspI	CCGCGG	1 cut(s)	147
LmnI	GCTCC	8 cut(s)	51, 101, 220, 295, 1381, 1410, 1468, 1940
Lsp1109I	GCAGC	4 cut(s)	146, 365, 961, 1834
LweI	GCATC	8 cut(s)	258, 340, 496, 520, 716, 782, 961, 1508
MaeI	CTAG	2 cut(s)	822, 1101
MaeII	ACGT	2 cut(s)	624, 659
MaeIII	GTNAC	2 cut(s)	1553, 1835
MbiI	CCGCTC	1 cut(s)	59
MfeI	CAATTG	1 cut(s)	1796
MflI	RGATCY	3 cut(s)	225, 1327, 1926
MhlI	GDGCHC	5 cut(s)	20, 83, 738, 1423, 1937
MlsI	TGGCCA	1 cut(s)	1907
MluNI	TGGCCA	1 cut(s)	1907
MlyI	GAGTC	1 cut(s)	405
MmeI	TCCRAC	2 cut(s)	98, 123
Mox20I	TGGCCA	1 cut(s)	1907
MroXI	GAANNNNTTC	1 cut(s)	1767
MscI	TGGCCA	1 cut(s)	1907
MseI	TTAA	6 cut(s)	276, 317, 330, 698, 1077, 1187
MslI	CAYNNNNRTG	1 cut(s)	1632
Msp20I	TGGCCA	1 cut(s)	1907
MspA1I	CMGCKG	1 cut(s)	146
MspCI	CTTAAG	1 cut(s)	1186
MspI	CCGG	5 cut(s)	26, 207, 1124, 1542, 1832
MspR9I	CCNGG	9 cut(s)	207, 759, 1125, 1543, 1673, 1727, 1784, 1833, 1931
MunI	CAATTG	1 cut(s)	1796
Mva1269I	GAATGC	1 cut(s)	1959
MvaI	CCWGG	5 cut(s)	759, 1673, 1727, 1784, 1931
MvnI	CGCG	4 cut(s)	114, 132, 141, 146
NciI	CCSGG	4 cut(s)	207, 1125, 1543, 1833
NlaIII	CATG	9 cut(s)	294, 551, 856, 945, 1046, 1112, 1139, 1757, 1919
NlaIV	GGNNCC	8 cut(s)	47, 97, 685, 1129, 1604, 1751, 1928, 1936
NmeAIII	GCCGAG	2 cut(s)	72, 192
NmuCI	GTSAC	2 cut(s)	1553, 1835
NsbI	TGCGCA	1 cut(s)	123
NspI	RCATGY	2 cut(s)	856, 945
PaeR7I	CTCGAG	1 cut(s)	230
PagI	TCATGA	2 cut(s)	1042, 1108
PciI	ACATGT	1 cut(s)	941
PcsI	WCGNNNNNNNCGW	2 cut(s)	99, 111
PctI	GAATGC	1 cut(s)	1959
PdmI	GAANNNNTTC	1 cut(s)	1767
PfeI	GAWTC	7 cut(s)	422, 587, 743, 858, 953, 1538, 1763
PkrI	GCNGC	9 cut(s)	58, 136, 145, 148, 183, 380, 535, 976, 1849
PleI	GAGTC	1 cut(s)	404
PpsI	GAGTC	1 cut(s)	404
PpuMI	RGGWCCY	2 cut(s)	448, 1226
PscI	ACATGT	1 cut(s)	941
PshBI	ATTAAT	1 cut(s)	276
PsiI	TTATAA	1 cut(s)	1475
Psp5II	RGGWCCY	2 cut(s)	448, 1226
Psp6I	CCWGG	5 cut(s)	757, 1671, 1725, 1782, 1929
PspGI	CCWGG	5 cut(s)	757, 1671, 1725, 1782, 1929
PspN4I	GGNNCC	8 cut(s)	47, 97, 685, 1129, 1604, 1751, 1928, 1936
PspPI	GGNCC	5 cut(s)	448, 684, 1072, 1226, 1603
PspPPI	RGGWCCY	2 cut(s)	448, 1226
PspXI	VCTCGAGB	1 cut(s)	230
PstI	CTGCAG	2 cut(s)	1282, 1844
PstNI	CAGNNNCTG	1 cut(s)	1229
PsuI	RGATCY	3 cut(s)	225, 1327, 1926
RsaI	GTAC	3 cut(s)	429, 756, 1758
RsaNI	GTAC	3 cut(s)	428, 755, 1757
RseI	CAYNNNNRTG	1 cut(s)	1632
SacII	CCGCGG	1 cut(s)	147
SaqAI	TTAA	6 cut(s)	276, 317, 330, 698, 1077, 1187
SatI	GCNGC	9 cut(s)	57, 135, 144, 147, 182, 379, 534, 975, 1848
Sau96I	GGNCC	5 cut(s)	448, 684, 1072, 1226, 1603
SchI	GAGTC	1 cut(s)	405
ScrFI	CCNGG	9 cut(s)	207, 759, 1125, 1543, 1673, 1727, 1784, 1833, 1931
SduI	GDGCHC	5 cut(s)	20, 83, 738, 1423, 1937
SfaNI	GCATC	8 cut(s)	258, 340, 496, 520, 716, 782, 961, 1508
SfcI	CTRYAG	2 cut(s)	1278, 1840
Sfr274I	CTCGAG	1 cut(s)	230
Sfr303I	CCGCGG	1 cut(s)	147
SgrBI	CCGCGG	1 cut(s)	147
SinI	GGWCC	2 cut(s)	448, 1226
SlaI	CTCGAG	1 cut(s)	230
SmiMI	CAYNNNNRTG	1 cut(s)	1632
SmlI	CTYRAG	4 cut(s)	230, 1160, 1186, 1494
SmoI	CTYRAG	4 cut(s)	230, 1160, 1186, 1494
SsiI	CCGC	7 cut(s)	57, 112, 144, 146, 182, 533, 1023
SspMI	CTAG	2 cut(s)	822, 1101
StyD4I	CCNGG	9 cut(s)	205, 757, 1123, 1541, 1671, 1725, 1782, 1831, 1929
StyI	CCWWGG	4 cut(s)	451, 687, 1347, 1507
TaaI	ACNGT	1 cut(s)	1082
TaiI	ACGT	2 cut(s)	627, 662
TaqI	TCGA	5 cut(s)	231, 789, 901, 1246, 1719
TatI	WGTACW	2 cut(s)	427, 1756
TauI	GCSGC	5 cut(s)	59, 146, 149, 184, 536
TfiI	GAWTC	7 cut(s)	422, 587, 743, 858, 953, 1538, 1763
Tru1I	TTAA	6 cut(s)	276, 317, 330, 698, 1077, 1187
Tru9I	TTAA	6 cut(s)	276, 317, 330, 698, 1077, 1187
TscAI	CASTG	2 cut(s)	268, 502
TseFI	GTSAC	2 cut(s)	1553, 1835
TseI	GCWGC	4 cut(s)	134, 378, 974, 1847
Tsp45I	GTSAC	2 cut(s)	1553, 1835
TspGWI	ACGGA	2 cut(s)	335, 1632
TspRI	CASTG	2 cut(s)	268, 502
Vha464I	CTTAAG	1 cut(s)	1186
VpaK11BI	GGWCC	2 cut(s)	448, 1226
VspI	ATTAAT	1 cut(s)	276
XagI	CCTNNNNNAGG	1 cut(s)	215
XapI	RAATTY	4 cut(s)	301, 361, 402, 870
XceI	RCATGY	2 cut(s)	856, 945
XhoI	CTCGAG	1 cut(s)	230
XmnI	GAANNNNTTC	1 cut(s)	1767
XspI	CTAG	2 cut(s)	822, 1101
ZraI	GACGTC	1 cut(s)	660

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.