Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002141

Physical Location & Seq

Genomic Coordinates Forward (+)

21740572 .. 21745241

Gene Structure 4670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G213700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGCCGATACCCTAAGCCCTAACCCAACGGCCCAGAAGCAGAGGCTCCCGATGGCCGCTCGTCTCCAGTCTCCAACCAGCCCCTTCTTCCTCGGCTCCAACGACGACCACCTCGAGCGTGCACAAGCACGTGCGGCACGCGCCGCCGCGATTCGCAGAAAGTCCATTGCGCTCAATTTACCGCCACTGGATGCGGATACTGATCCCTGCCTCGGCAAGGAGCAGATTCTCGAGCTGTTCCAGAATTGCATCAAACTGGCTAGCGAAAATAAAATTAATCAAAAGAACACATGGGAGCTCAATCTGATAGACCATTTGACGGAAATTATTAAGGTTGAAGAGGAAAATGACGCTGAGACGAATTTTCAAAAGGCAAGCTGCACTCTTGAAGCTGGAGTCAAAATTTACTCATTAAGGGTGGATTCAGTACACTCTGAGGCATATAAGGTCCTTGGTGGAATGAATAGAGCAGGCCAAGAAGACGAACAAGATACTAGTCCGGATGATGCCGCTGTTGACAATGGACAAGATGTGGCGCATTCCAAGAAAGAGATGGAGAAAAAGTCACCTTTATCAACGCTGGAGTCGTCTTTTGAGGCTCTAAATGTAAAAAAGTTTGATGTTGCATTTGCAGTTGATCCACTCTATCATCAGACATCTGCACAATTTGATGAAGGTGGGGCTAGGGGTCTTTTAATGAATAATCTTGGAGTATATGGTAGATGCAGAGTTCTCTTTGACTCGTCGGAAGTACCAGCGAAGTGCATGTCATGTGATAATCAACATGATAAATCAGATACCATCGATCTTTCTTTTGCTAGTGAGTATGTTGAACAAATGGTATTGAACATGCGAATGAAAGATGAAATTTCACCAACTCTCAGGAATATAGTCAATCGATTTGATGAAGATAACAGAAGGCCAGCAGATATTTATTCCTGTTCTCAAGAATCAGCAGAGCAAGTAGACGCAGCCCATAATAATGAAGTTGAATTTGATGGTGATGTACCTGAGAACTTTGGGAACTGGGATTACGAACATGATGACCAAACAAGCATGGTAGAGGAGGGTCTTAACTGTGAAAATTCAACTTTTCCTAGTTGTCACGAGGAAAATGAACCGGGCGCTTTCGATGAGCGTGATAACGAGGAGAGACTTAAGGAAGTTGATGAGTATTTGTTCTTAAGTCTTGGATTAACTTCAAAACAAAATGCATGGGCAGGTCCTGATCATTGGAAGTATCGAAAAACTAAAGTTTCCGAGATTGATCCTTCTGGAGAACAACCAGTGGCGGTTAAACGACATAGGAAAAAAGTACAGCCTGATCTTGATTTCACGAAAGCCTTGGAAGAAGAAATGCCAGATATTTTTGCTTCTCCAAAAAATCCGAAGTCCTTACTGCTGCCAGCAAATAGAGGACCCTGTAATACAAAGCTTCCTGAGGATTGCCACTATCAACCAGAGGATCTTATCAAGCTATTTCTGATACCTAATGTAAAGTTCCTTGGAAGGAGAGGCAAGAAGTCCTCAGATGAATCGAGGCGACAGTCTGATGATTATGGGCAATCGCCATTCTACGATGATGATGATGTATTTGGTGGCCAATATGATGACGGAATTAGCCATAGTGATGTGGAGGACTTTAGCACACTTGTTTCTCAGCCTCGCCAGGTAAACAAAATTGAAGTCCACTATGACAAGACTTCCAAACAAGTTGATGTCCAGGTTCTGAAAGAAACCCTTTGGGGCCATGTACAAGAATCTGTTCACATGTCGACACAGGGTCAAGAACAACTGGCATCCTTCAAGCAAATCTTGGCCAGCTTCCCAAGTGACTGCAGAGCTGCTGGAACTATCAATGAAATCTCCCCTCATCTGTGTTTCATATGCCTTTTACATTTAGCCAATGAGCATGGCTTGAGCATCCTTGGCACCACCAATTTGGATGATCTCAGCATACACCTTCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000793 GO:0000794 GO:0000796 GO:0000799 GO:0000819 GO:0001671 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006323 GO:0006996 GO:0007049 GO:0007059 GO:0007076 GO:0008047 GO:0008150 GO:0009987 GO:0010911 GO:0010912 GO:0016043 GO:0019899 GO:0022402 GO:0030234 GO:0030261 GO:0031974 GO:0031981 GO:0032781 GO:0032991 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044547 GO:0044815 GO:0048285 GO:0050790 GO:0051276 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0071103 GO:0071840 GO:0072586 GO:0072587 GO:0098772 GO:0098813 GO:0140014 GO:1903047 GO:2000371 GO:2000373

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd2

Protein Analysis

657

Amino Acids

73.75

Weight (kDa)

4.78

Isoelectric Point (pI)

51.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32590
fragaria_vesca	FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_6g42730 FvH4_6g42730 FvH4_6g42730
malus_domestica	MD03G1195600.v1.1 MD03G1195700.v1.1 MD09G1071300.v1.1 MD11G1212100.v1.1 MD17G1101300.v1.1
prunus_persica	Prupe.3G213700_v2.0.a1 Prupe.4G220400_v2.0.a1
pyrus_communis	pycom03g14790 pycom09g03480 pycom17g09560 pycom17g09570
rosa_chinensis	RchiOBHm_Chr2g0158621 RchiOBHm_Chr5g0041001
rosa_laevigata	RLG00000021100 RLG00000034019
rosa_multiflora	Rmu_co8379437.1_g000001 Rmu_sc0005650.1_g000010 Rmu_sc0030339.1_g000001 Rmu_sc0040010.1_g000001 Rmu_sc0042494.1_g000001 Rmu_ssc0000284.1_g000007
rosa_roxburghii	Rroxscaffold_1G00039700 Rroxscaffold_2G00091170
rosa_rugosa	Rorug02G0471000 Rorug05G0189400
rosa_samantha	Rh2AG536600 Rh2BG549700 Rh2CG520300 Rh2DG559400 Rh5AG274600 Rh5BG279900 Rh5CG312000 Rh5DG287900
rosa_wichuraiana	Rw2G044420 Rw5G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1211
AccB1I	GGYRCC	1 cut(s)	1931
AccBSI	CCGCTC	1 cut(s)	59
AccI	GTMKAC	2 cut(s)	966, 1775
AccII	CGCG	2 cut(s)	141, 149
AccIII	TCCGGA	1 cut(s)	499
AciI	CCGC	8 cut(s)	57, 134, 144, 147, 182, 194, 510, 1292
AclWI	GGATC	4 cut(s)	197, 632, 1262, 1473
AcoI	YGGCCR	4 cut(s)	3, 54, 1600, 1818
AcsI	RAATTY	5 cut(s)	361, 402, 867, 992, 1084
AcvI	CACGTG	1 cut(s)	131
AfaI	GTAC	5 cut(s)	429, 753, 1008, 1317, 1755
AfiI	CCNNNNNNNGG	3 cut(s)	212, 217, 319
AflII	CTTAAG	2 cut(s)	1157, 1183
AflIII	ACRYGT	1 cut(s)	1770
AhdI	GACNNNNNGTC	1 cut(s)	1782
AhlI	ACTAGT	1 cut(s)	494
AjnI	CCWGG	2 cut(s)	1668, 1722
AluBI	AGCT	8 cut(s)	235, 298, 378, 392, 1435, 1477, 1824, 1844
AluI	AGCT	8 cut(s)	235, 298, 378, 392, 1435, 1477, 1824, 1844
Alw21I	GWGCWC	2 cut(s)	124, 300
Alw26I	GTCTC	4 cut(s)	68, 75, 350, 1147
Alw44I	GTGCAC	1 cut(s)	120
AlwI	GGATC	4 cut(s)	197, 632, 1262, 1473
AlwNI	CAGNNNCTG	2 cut(s)	1226, 1729
Ama87I	CYCGRG	2 cut(s)	113, 230
Aor13HI	TCCGGA	1 cut(s)	499
AoxI	GGCC	8 cut(s)	3, 30, 54, 472, 920, 1600, 1747, 1818
ApaLI	GTGCAC	1 cut(s)	120
ApeKI	GCWGC	4 cut(s)	378, 971, 1402, 1844
ApoI	RAATTY	5 cut(s)	361, 402, 867, 992, 1084
ArsI	GACNNNNNNTTYG	4 cut(s)	752, 784, 1671, 1703
AseI	ATTAAT	1 cut(s)	276
Asp700I	GAANNNNTTC	1 cut(s)	1764
AspLEI	GCGC	4 cut(s)	143, 172, 538, 1127
AspS9I	GGNCC	5 cut(s)	31, 448, 1223, 1418, 1747
AsuC2I	CCSGG	1 cut(s)	1122
AsuHPI	GGTGA	3 cut(s)	558, 864, 1013
AsuNHI	GCTAGC	1 cut(s)	260
AvaI	CYCGRG	2 cut(s)	113, 230
AvaII	GGWCC	3 cut(s)	448, 1223, 1418
AxyI	CCTNAGG	1 cut(s)	1440
BaeGI	GKGCMC	1 cut(s)	124
BalI	TGGCCA	2 cut(s)	1602, 1820
BanI	GGYRCC	1 cut(s)	1931
BanII	GRGCYC	1 cut(s)	300
BauI	CACGAG	1 cut(s)	1106
BbrPI	CACGTG	1 cut(s)	131
BbsI	GAAGAC	1 cut(s)	486
Bbv12I	GWGCWC	2 cut(s)	124, 300
BbvI	GCAGC	4 cut(s)	365, 983, 1389, 1831
BccI	CCATC	4 cut(s)	46, 547, 809, 992
BceAI	ACGGC	1 cut(s)	45
BciT130I	CCWGG	2 cut(s)	1670, 1724
BciVI	GTATCC	1 cut(s)	190
BclI	TGATCA	1 cut(s)	1228
BcnI	CCSGG	1 cut(s)	1122
BcoDI	GTCTC	4 cut(s)	68, 75, 350, 1147
BcuI	ACTAGT	1 cut(s)	494
BfaI	CTAG	5 cut(s)	261, 495, 684, 819, 1098
BfmI	CTRYAG	1 cut(s)	1837
BfoI	RGCGCY	1 cut(s)	1128
BfrI	CTTAAG	2 cut(s)	1157, 1183
BfuAI	ACCTGC	1 cut(s)	1211
BfuI	GTATCC	1 cut(s)	190
BisI	GCNGC	9 cut(s)	57, 135, 144, 147, 379, 510, 972, 1403, 1845
BlsI	GCNGC	9 cut(s)	58, 136, 145, 148, 380, 511, 973, 1404, 1846
Bme1390I	CCNGG	3 cut(s)	1122, 1670, 1724
Bme18I	GGWCC	3 cut(s)	448, 1223, 1418
BmeRI	GACNNNNNGTC	1 cut(s)	1782
BmeT110I	CYCGRG	2 cut(s)	113, 230
BmgT120I	GGNCC	5 cut(s)	31, 448, 1223, 1418, 1747
BmiI	GGNNCC	5 cut(s)	47, 97, 1420, 1748, 1933
BmrFI	CCNGG	3 cut(s)	1122, 1670, 1724
BmrI	ACTGGG	1 cut(s)	1036
BmsI	GCATC	6 cut(s)	181, 258, 496, 713, 1808, 1932
BmtI	GCTAGC	1 cut(s)	264
BmuI	ACTGGG	1 cut(s)	1036
BpiI	GAAGAC	1 cut(s)	486
BpmI	CTGGAG	4 cut(s)	50, 414, 602, 1296
Bpu10I	CCTNAGC	1 cut(s)	14
BpuEI	CTTGAG	2 cut(s)	930, 1939
BpuMI	CCSGG	1 cut(s)	1122
Bsa29I	ATCGAT	2 cut(s)	804, 898
BsaAI	YACGTR	1 cut(s)	131
BsaBI	GATNNNNATC	1 cut(s)	201
BsaJI	CCNNGG	6 cut(s)	91, 211, 451, 1344, 1504, 1927
BsaWI	WCCGGW	1 cut(s)	499
BsaXI	ACNNNNNCTCC	2 cut(s)	548, 578
Bsc4I	CCNNNNNNNGG	3 cut(s)	212, 217, 319
Bse1I	ACTGG	6 cut(s)	67, 192, 261, 1031, 1286, 1800
Bse21I	CCTNAGG	1 cut(s)	1440
Bse3DI	GCAATG	1 cut(s)	165
Bse8I	GATNNNNATC	1 cut(s)	201
BseAI	TCCGGA	1 cut(s)	499
BseBI	CCWGG	2 cut(s)	1670, 1724
BseCI	ATCGAT	2 cut(s)	804, 898
BseDI	CCNNGG	6 cut(s)	91, 211, 451, 1344, 1504, 1927
BseGI	GGATG	5 cut(s)	196, 508, 1799, 1923, 1951
BseJI	GATNNNNATC	1 cut(s)	201
BseLI	CCNNNNNNNGG	3 cut(s)	212, 217, 319
BseMI	GCAATG	1 cut(s)	165
BseMII	CTCAG	8 cut(s)	345, 426, 895, 1002, 1431, 1542, 1673, 1966
BseNI	ACTGG	6 cut(s)	67, 192, 261, 1031, 1286, 1800
BseRI	GAGGAG	2 cut(s)	1079, 1163
BseSI	GKGCMC	1 cut(s)	124
BseXI	GCAGC	4 cut(s)	365, 983, 1389, 1831
BsgI	GTGCAG	2 cut(s)	364, 645
Bsh1236I	CGCG	2 cut(s)	141, 149
BshFI	GGCC	8 cut(s)	5, 32, 56, 474, 922, 1602, 1749, 1820
BshNI	GGYRCC	1 cut(s)	1931
BshVI	ATCGAT	2 cut(s)	804, 898
BsiHKAI	GWGCWC	2 cut(s)	124, 300
BsiHKCI	CYCGRG	2 cut(s)	113, 230
BsiSI	CCGG	2 cut(s)	500, 1121
BslI	CCNNNNNNNGG	3 cut(s)	212, 217, 319
BsmAI	GTCTC	4 cut(s)	68, 75, 350, 1147
BsmBI	CGTCTC	2 cut(s)	68, 350
BsmI	GAATGC	1 cut(s)	538
BsnI	GGCC	8 cut(s)	5, 32, 56, 474, 922, 1602, 1749, 1820
BsoBI	CYCGRG	2 cut(s)	113, 230
Bsp1286I	GDGCHC	2 cut(s)	124, 300
Bsp13I	TCCGGA	1 cut(s)	499
Bsp1407I	TGTACA	1 cut(s)	1753
Bsp143I	GATC	8 cut(s)	202, 637, 805, 1228, 1267, 1324, 1465, 1948
BspACI	CCGC	8 cut(s)	57, 134, 144, 147, 182, 194, 510, 1292
BspANI	GGCC	8 cut(s)	5, 32, 56, 474, 922, 1602, 1749, 1820
BspCNI	CTCAG	8 cut(s)	346, 427, 894, 1003, 1432, 1541, 1672, 1965
BspDI	ATCGAT	2 cut(s)	804, 898
BspEI	TCCGGA	1 cut(s)	499
BspFNI	CGCG	2 cut(s)	141, 149
BspLI	GGNNCC	5 cut(s)	47, 97, 1420, 1748, 1933
BspMAI	CTGCAG	1 cut(s)	1841
BspMI	ACCTGC	1 cut(s)	1211
BspOI	GCTAGC	1 cut(s)	264
BspPI	GGATC	4 cut(s)	197, 632, 1262, 1473
BspT107I	GGYRCC	1 cut(s)	1931
BspTI	CTTAAG	2 cut(s)	1157, 1183
BsrBI	CCGCTC	1 cut(s)	59
BsrDI	GCAATG	1 cut(s)	165
BsrGI	TGTACA	1 cut(s)	1753
BsrI	ACTGG	6 cut(s)	67, 192, 261, 1031, 1286, 1800
BssECI	CCNNGG	6 cut(s)	91, 211, 451, 1344, 1504, 1927
BssMI	GATC	8 cut(s)	202, 637, 805, 1228, 1267, 1324, 1465, 1948
BssSI	CACGAG	1 cut(s)	1106
BssT1I	CCWWGG	4 cut(s)	451, 1344, 1504, 1927
Bst2BI	CACGAG	1 cut(s)	1106
Bst2UI	CCWGG	2 cut(s)	1670, 1724
Bst4CI	ACNGT	2 cut(s)	1079, 1548
Bst6I	CTCTTC	1 cut(s)	333
BstAFI	CTTAAG	2 cut(s)	1157, 1183
BstAUI	TGTACA	1 cut(s)	1753
BstBAI	YACGTR	1 cut(s)	131
BstC8I	GCNNGC	8 cut(s)	120, 139, 262, 376, 472, 924, 1407, 1822
BstENI	CCTNNNNNAGG	1 cut(s)	215
BstF5I	GGATG	5 cut(s)	196, 508, 1799, 1923, 1951
BstFNI	CGCG	2 cut(s)	141, 149
BstH2I	RGCGCY	1 cut(s)	1128
BstHHI	GCGC	4 cut(s)	143, 172, 538, 1127
BstKTI	GATC	8 cut(s)	205, 640, 808, 1231, 1270, 1327, 1468, 1951
BstMAI	GTCTC	4 cut(s)	68, 75, 350, 1147
BstMBI	GATC	8 cut(s)	202, 637, 805, 1228, 1267, 1324, 1465, 1948
BstMWI	GCNNNNNNNGC	4 cut(s)	134, 140, 143, 1929
BstNI	CCWGG	2 cut(s)	1670, 1724
BstNSI	RCATGY	3 cut(s)	769, 853, 1774
BstSCI	CCNGG	3 cut(s)	1120, 1668, 1722
BstSFI	CTRYAG	1 cut(s)	1837
BstSLI	GKGCMC	1 cut(s)	124
BstUI	CGCG	2 cut(s)	141, 149
BstV1I	GCAGC	4 cut(s)	365, 983, 1389, 1831
BstV2I	GAAGAC	1 cut(s)	486
BstX2I	RGATCY	1 cut(s)	1465
BstXI	CCANNNNNNTGG	1 cut(s)	1942
BstYI	RGATCY	1 cut(s)	1465
Bsu15I	ATCGAT	2 cut(s)	804, 898
Bsu36I	CCTNAGG	1 cut(s)	1440
BsuI	GTATCC	1 cut(s)	190
BsuRI	GGCC	8 cut(s)	5, 32, 56, 474, 922, 1602, 1749, 1820
BsuTUI	ATCGAT	2 cut(s)	804, 898
BtsCI	GGATG	5 cut(s)	196, 508, 1799, 1923, 1951
BtsIMutI	CAGTG	2 cut(s)	185, 1293
BveI	ACCTGC	1 cut(s)	1211
Cac8I	GCNNGC	8 cut(s)	120, 139, 262, 376, 472, 924, 1407, 1822
CaiI	CAGNNNCTG	2 cut(s)	1226, 1729
CfoI	GCGC	4 cut(s)	143, 172, 538, 1127
Cfr13I	GGNCC	5 cut(s)	31, 448, 1223, 1418, 1747
ClaI	ATCGAT	2 cut(s)	804, 898
CseI	GACGC	2 cut(s)	359, 977
Csp6I	GTAC	5 cut(s)	428, 752, 1007, 1316, 1754
CviQI	GTAC	5 cut(s)	428, 752, 1007, 1316, 1754
DpnI	GATC	8 cut(s)	204, 639, 807, 1230, 1269, 1326, 1467, 1950
DpnII	GATC	8 cut(s)	202, 637, 805, 1228, 1267, 1324, 1465, 1948
DriI	GACNNNNNGTC	1 cut(s)	1782
EaeI	YGGCCR	4 cut(s)	3, 54, 1600, 1818
Eam1104I	CTCTTC	1 cut(s)	333
Eam1105I	GACNNNNNGTC	1 cut(s)	1782
EarI	CTCTTC	1 cut(s)	333
Ecl136II	GAGCTC	1 cut(s)	298
Eco130I	CCWWGG	4 cut(s)	451, 1344, 1504, 1927
Eco24I	GRGCYC	1 cut(s)	300
Eco47I	GGWCC	3 cut(s)	448, 1223, 1418
Eco53kI	GAGCTC	1 cut(s)	298
Eco72I	CACGTG	1 cut(s)	131
Eco81I	CCTNAGG	1 cut(s)	1440
Eco88I	CYCGRG	2 cut(s)	113, 230
EcoICRI	GAGCTC	1 cut(s)	298
EcoNI	CCTNNNNNAGG	1 cut(s)	215
EcoO109I	RGGNCCY	3 cut(s)	448, 1223, 1418
EcoRII	CCWGG	2 cut(s)	1668, 1722
EcoT14I	CCWWGG	4 cut(s)	451, 1344, 1504, 1927
EcoT22I	ATGCAT	1 cut(s)	1216
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	4 cut(s)	451, 1344, 1504, 1927
Esp3I	CGTCTC	2 cut(s)	68, 350
FalI	AAGNNNNNCTT	4 cut(s)	1725, 1757, 1799, 1831
FauNDI	CATATG	1 cut(s)	1886
FbaI	TGATCA	1 cut(s)	1228
FblI	GTMKAC	2 cut(s)	966, 1775
Fnu4HI	GCNGC	9 cut(s)	57, 135, 144, 147, 379, 510, 972, 1403, 1845
FokI	GGATG	5 cut(s)	203, 515, 1786, 1910, 1958
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	9 cut(s)	57, 135, 144, 147, 379, 510, 972, 1403, 1845
FspBI	CTAG	5 cut(s)	261, 495, 684, 819, 1098
GlaI	GCGC	4 cut(s)	142, 171, 537, 1126
GluI	GCNGC	9 cut(s)	57, 135, 144, 147, 379, 510, 972, 1403, 1845
GsuI	CTGGAG	4 cut(s)	50, 414, 602, 1296
HaeII	RGCGCY	1 cut(s)	1128
HaeIII	GGCC	8 cut(s)	5, 32, 56, 474, 922, 1602, 1749, 1820
HapII	CCGG	2 cut(s)	500, 1121
HgaI	GACGC	2 cut(s)	359, 977
HhaI	GCGC	4 cut(s)	143, 172, 538, 1127
Hin6I	GCGC	4 cut(s)	141, 170, 536, 1125
HinP1I	GCGC	4 cut(s)	141, 170, 536, 1125
HincII	GTYRAC	2 cut(s)	517, 1776
HindII	GTYRAC	2 cut(s)	517, 1776
HindIII	AAGCTT	1 cut(s)	1433
HinfI	GANTC	9 cut(s)	151, 226, 396, 422, 584, 740, 950, 1535, 1760
HpaII	CCGG	2 cut(s)	500, 1121
HphI	GGTGA	3 cut(s)	558, 864, 1013
Hpy166II	GTNNAC	8 cut(s)	122, 430, 517, 967, 1675, 1690, 1768, 1776
Hpy8I	GTNNAC	8 cut(s)	122, 430, 517, 967, 1675, 1690, 1768, 1776
Hpy99I	CGWCG	2 cut(s)	107, 748
HpyAV	CCTTC	6 cut(s)	94, 668, 912, 1281, 1503, 1813
HpyCH4III	ACNGT	2 cut(s)	1079, 1548
HpyCH4IV	ACGT	1 cut(s)	130
HpyF10VI	GCNNNNNNNGC	4 cut(s)	134, 140, 143, 1929
HpySE526I	ACGT	1 cut(s)	130
HspAI	GCGC	4 cut(s)	141, 170, 536, 1125
Kpn2I	TCCGGA	1 cut(s)	499
Ksp22I	TGATCA	1 cut(s)	1228
Kzo9I	GATC	8 cut(s)	202, 637, 805, 1228, 1267, 1324, 1465, 1948
LmnI	GCTCC	4 cut(s)	51, 101, 220, 295
Lsp1109I	GCAGC	4 cut(s)	365, 983, 1389, 1831
LweI	GCATC	6 cut(s)	181, 258, 496, 713, 1808, 1932
MaeI	CTAG	5 cut(s)	261, 495, 684, 819, 1098
MaeII	ACGT	1 cut(s)	130
MaeIII	GTNAC	3 cut(s)	564, 1103, 1832
MalI	GATC	8 cut(s)	204, 639, 807, 1230, 1269, 1326, 1467, 1950
MbiI	CCGCTC	1 cut(s)	59
MboI	GATC	8 cut(s)	202, 637, 805, 1228, 1267, 1324, 1465, 1948
MboII	GAAGA	6 cut(s)	79, 350, 491, 920, 1361, 1364
MflI	RGATCY	1 cut(s)	1465
MhlI	GDGCHC	2 cut(s)	124, 300
MlsI	TGGCCA	2 cut(s)	1602, 1820
MluNI	TGGCCA	2 cut(s)	1602, 1820
MlyI	GAGTC	3 cut(s)	405, 593, 734
MmeI	TCCRAC	3 cut(s)	98, 123, 726
Mox20I	TGGCCA	2 cut(s)	1602, 1820
Mph1103I	ATGCAT	1 cut(s)	1216
MroI	TCCGGA	1 cut(s)	499
MroXI	GAANNNNTTC	1 cut(s)	1764
MscI	TGGCCA	2 cut(s)	1602, 1820
MseI	TTAA	9 cut(s)	276, 330, 413, 695, 1074, 1158, 1184, 1196, 1296
MslI	CAYNNNNRTG	3 cut(s)	854, 981, 1629
Msp20I	TGGCCA	2 cut(s)	1602, 1820
MspA1I	CMGCKG	1 cut(s)	512
MspCI	CTTAAG	2 cut(s)	1157, 1183
MspI	CCGG	2 cut(s)	500, 1121
MspR9I	CCNGG	3 cut(s)	1122, 1670, 1724
Mva1269I	GAATGC	1 cut(s)	538
MvaI	CCWGG	2 cut(s)	1670, 1724
MvnI	CGCG	2 cut(s)	141, 149
MwoI	GCNNNNNNNGC	4 cut(s)	134, 140, 143, 1929
NciI	CCSGG	1 cut(s)	1122
NdeI	CATATG	1 cut(s)	1886
NdeII	GATC	8 cut(s)	202, 637, 805, 1228, 1267, 1324, 1465, 1948
NheI	GCTAGC	1 cut(s)	260
NlaIV	GGNNCC	5 cut(s)	47, 97, 1420, 1748, 1933
NmeAIII	GCCGAG	2 cut(s)	72, 192
NmuCI	GTSAC	3 cut(s)	564, 1103, 1832
NsiI	ATGCAT	1 cut(s)	1216
NspI	RCATGY	3 cut(s)	769, 853, 1774
PaeR7I	CTCGAG	2 cut(s)	113, 230
PciI	ACATGT	1 cut(s)	1770
PcsI	WCGNNNNNNNCGW	3 cut(s)	99, 111, 584
PctI	GAATGC	1 cut(s)	538
PdmI	GAANNNNTTC	1 cut(s)	1764
PfeI	GAWTC	6 cut(s)	151, 226, 422, 950, 1535, 1760
PkrI	GCNGC	9 cut(s)	58, 136, 145, 148, 380, 511, 973, 1404, 1846
PleI	GAGTC	3 cut(s)	404, 592, 734
PmaCI	CACGTG	1 cut(s)	131
PmlI	CACGTG	1 cut(s)	131
PpsI	GAGTC	3 cut(s)	404, 592, 734
Ppu21I	YACGTR	1 cut(s)	131
PpuMI	RGGWCCY	3 cut(s)	448, 1223, 1418
PscI	ACATGT	1 cut(s)	1770
PshBI	ATTAAT	1 cut(s)	276
Psp124BI	GAGCTC	1 cut(s)	300
Psp5II	RGGWCCY	3 cut(s)	448, 1223, 1418
Psp6I	CCWGG	2 cut(s)	1668, 1722
PspCI	CACGTG	1 cut(s)	131
PspGI	CCWGG	2 cut(s)	1668, 1722
PspN4I	GGNNCC	5 cut(s)	47, 97, 1420, 1748, 1933
PspPI	GGNCC	5 cut(s)	31, 448, 1223, 1418, 1747
PspPPI	RGGWCCY	3 cut(s)	448, 1223, 1418
PspXI	VCTCGAGB	1 cut(s)	113
PsrI	GAACNNNNNNTAC	2 cut(s)	1016, 1048
PstI	CTGCAG	1 cut(s)	1841
PstNI	CAGNNNCTG	2 cut(s)	1226, 1729
PsuI	RGATCY	1 cut(s)	1465
RsaI	GTAC	5 cut(s)	429, 753, 1008, 1317, 1755
RsaNI	GTAC	5 cut(s)	428, 752, 1007, 1316, 1754
RseI	CAYNNNNRTG	3 cut(s)	854, 981, 1629
SacI	GAGCTC	1 cut(s)	300
SalI	GTCGAC	1 cut(s)	1774
SaqAI	TTAA	9 cut(s)	276, 330, 413, 695, 1074, 1158, 1184, 1196, 1296
SatI	GCNGC	9 cut(s)	57, 135, 144, 147, 379, 510, 972, 1403, 1845
Sau3AI	GATC	8 cut(s)	202, 637, 805, 1228, 1267, 1324, 1465, 1948
Sau96I	GGNCC	5 cut(s)	31, 448, 1223, 1418, 1747
SchI	GAGTC	3 cut(s)	405, 593, 734
ScrFI	CCNGG	3 cut(s)	1122, 1670, 1724
SduI	GDGCHC	2 cut(s)	124, 300
SfaNI	GCATC	6 cut(s)	181, 258, 496, 713, 1808, 1932
SfcI	CTRYAG	1 cut(s)	1837
Sfr274I	CTCGAG	2 cut(s)	113, 230
SinI	GGWCC	3 cut(s)	448, 1223, 1418
SlaI	CTCGAG	2 cut(s)	113, 230
SmiMI	CAYNNNNRTG	3 cut(s)	854, 981, 1629
SmlI	CTYRAG	6 cut(s)	113, 230, 945, 1157, 1183, 1918
SmoI	CTYRAG	6 cut(s)	113, 230, 945, 1157, 1183, 1918
SpeI	ACTAGT	1 cut(s)	494
SsiI	CCGC	8 cut(s)	57, 134, 144, 147, 182, 194, 510, 1292
SspMI	CTAG	5 cut(s)	261, 495, 684, 819, 1098
SstI	GAGCTC	1 cut(s)	300
StyD4I	CCNGG	3 cut(s)	1120, 1668, 1722
StyI	CCWWGG	4 cut(s)	451, 1344, 1504, 1927
TaaI	ACNGT	2 cut(s)	1079, 1548
TaiI	ACGT	1 cut(s)	133
TaqI	TCGA	8 cut(s)	114, 231, 804, 898, 1131, 1243, 1538, 1775
TatI	WGTACW	3 cut(s)	427, 1315, 1753
TauI	GCSGC	5 cut(s)	59, 137, 146, 149, 512
TfiI	GAWTC	6 cut(s)	151, 226, 422, 950, 1535, 1760
Tru1I	TTAA	9 cut(s)	276, 330, 413, 695, 1074, 1158, 1184, 1196, 1296
Tru9I	TTAA	9 cut(s)	276, 330, 413, 695, 1074, 1158, 1184, 1196, 1296
TscAI	CASTG	2 cut(s)	192, 1293
TseFI	GTSAC	3 cut(s)	564, 1103, 1832
TseI	GCWGC	4 cut(s)	378, 971, 1402, 1844
Tsp45I	GTSAC	3 cut(s)	564, 1103, 1832
TspGWI	ACGGA	2 cut(s)	335, 1629
TspRI	CASTG	2 cut(s)	192, 1293
Vha464I	CTTAAG	2 cut(s)	1157, 1183
VneI	GTGCAC	1 cut(s)	120
VpaK11BI	GGWCC	3 cut(s)	448, 1223, 1418
VspI	ATTAAT	1 cut(s)	276
XagI	CCTNNNNNAGG	1 cut(s)	215
XapI	RAATTY	5 cut(s)	361, 402, 867, 992, 1084
XceI	RCATGY	3 cut(s)	769, 853, 1774
XcmI	CCANNNNNNNNNTGG	1 cut(s)	550
XhoI	CTCGAG	2 cut(s)	113, 230
XmiI	GTMKAC	2 cut(s)	966, 1775
XmnI	GAANNNNTTC	1 cut(s)	1764
XspI	CTAG	5 cut(s)	261, 495, 684, 819, 1098
Zsp2I	ATGCAT	1 cut(s)	1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.