Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002141

Physical Location & Seq

Genomic Coordinates Forward (+)

74843304 .. 74848011

Gene Structure 4708 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52729

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGGCCGACGTCCTAAGCCCCGACCCAACCACCACCCAGAAGCAGCGCCTCTCCATGGCCGCCCGCCTCCAGTCTCCCACCAGCCCCTTCTTCCTCGGCTCCAACGACGACCACCTCGAGCGTGCCCAGACACGCGCCGCACGCGCAGCCGCGATTCGAAGAAAGTCCCTCGCCCTCAATCGTCAGCCACTGCTTGACGGCCCCGATTCCGATCCCGGCCTCGACAAGCAGCAGATCCTTGAGCTCTTCCAGAATTGTATAAAACTCGCGAGTGAAAATAAAATTAACCAAAAGAATACTTGGGAGCTGAACTTGATTGACCACTTGGCGGAGCTTGTCAAGGTCGAAGAGGAAAAGGATGCTGAGACGAATTTTCAAAAGGCAAGTTGCACTTTGGAAGCTGGAGTGAAGATTTACTCCTTGAGAGTTGATTCAGTTCACTCCGAGGCATACAAGGTCCTTGGTGGGATGAATCGAGCTGGACAAGACAATGAACAAGATACTGGTACGGAGGATGCCAATGCTGACAATGAACAAGACATGGCTACTTCCAAAAAAGAGAGAAAGATGTCACCTTTATCGACACTGGAGTCATCTTTTGAGGCTCTAAATGTGAAAAAGTTTGATGTTGCATTTGCAGTTGATCCACTCTATCATCAGACATCTGCACAATTTGATGAAGGCGGGGCCAGGGGTCTTTTAATGAATAATCTTGGAGTATATGGTAGATGCAGAGTGCTCTTTGACTCATCGGAGGTGCCAGGGAAGTGCATATCATCTGAGAATCAACATGATAAATCAGATACCATTGATCTTTCTTTTGCTAGTGAATATGTTGAAGAGATGGTAACGAACATGCGGATGAAAGATGAAATTTCACCAACTCTCAGGCATTTGGTTGATAGATTTGATGAAGATAACAGAAGGCCACCAGATACATATTCATGTGCTCAGGAATCGGCAGAACAAGATGATTCTACCTTTAATAATGACATTGACATTGATGGTGGTGTTGCATCTCACAACGATGGGACCTGGGATTATGATCATGATGAGCAAACAAGCATGGTGGAGGAGGAACATAACTACGAAAATACAAGTTTCCCTAGTTATCATGAGGAAAATGAACTAAGTTCTTTCCATGAACCTGATTTTGATGACAGACTTGAGAAAGTTGATGGCTTTTTGTTTTTAAGTCTTGGATTCACTTCAAAACAAAATGCTTGGGCAGGTCCTGATCATTGGAAGTACCAAAAAACTAAAGGTTCCGAGATGAATCCTCCTGCAGAACCACCAATAACAATTAAGCGACAAAGAAGCAAACAACAGCCTGATATTGATTTCACAAAAGCCTTGGAAGAAGAAATGTCAGATCTATTTGCTCCCCCCAAAAACCCCAAGTCGTTGCTGCTGCCCGCAAATAGAGCAAGTTGCAGTACGAAACTTCCTGAGGATTGCCACTATCAACCAGAGGATCTTATCAAGTTATTCCTTCTACCCAATGTAAAGTGCCTTGGAAGGAGAGGGAAGAAGTCCTCAGATCAATCAAGGCAACAATATGATGATTGTGGGCAATCTTCATTTTGTGATGATGGTGGTGGCCAGTATGATGACGGCCAATATGACGAGGGAAATGTCCATAGTGATGTAGAGGACTTTAGCACACTTGTTTCTCAACCTCGCCAGGTAAACAAAATTGAAGTCCAGTATGACAAGACGTCCAAACAAGTTGATGTCCAGGCTTTGAAAGAAACCCTTTGGGCCCATGTACAAGAAACTGTTCAAAAGTCTACCCAGGGCGAAGAACAGGTGGTGTCCTTCAAGCAAATATTGGGTAGCTTTCCTAGTGACTGCAGGGCTGCTCCAACTATCAATGACATCTCCCCTCATCTGTGTTTCATATGCCTATTGCATTTAGCCAATGAGCATGGGTTGAAGATCCTTGGCAATACCAATCTGGATGATCTCAGTGTACACCTACCTCTCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000793 GO:0000794 GO:0000796 GO:0000799 GO:0000819 GO:0001671 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006323 GO:0006996 GO:0007049 GO:0007059 GO:0007076 GO:0008047 GO:0008150 GO:0009987 GO:0010911 GO:0010912 GO:0016043 GO:0019899 GO:0022402 GO:0030234 GO:0030261 GO:0031974 GO:0031981 GO:0032781 GO:0032991 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044547 GO:0044815 GO:0048285 GO:0050790 GO:0051276 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0071103 GO:0071840 GO:0072586 GO:0072587 GO:0098772 GO:0098813 GO:0140014 GO:1903047 GO:2000371 GO:2000373

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd2

Protein Analysis

663

Amino Acids

74.54

Weight (kDa)

4.75

Isoelectric Point (pI)

49.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cnd2	PF05786	28 - 546	8.7e-87	Condensin complex subunit 2
Cnd2	PF05786	547 - 658	3.2e-26	Condensin complex subunit 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32590
fragaria_vesca	FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_6g42730 FvH4_6g42730 FvH4_6g42730
malus_domestica	MD03G1195600.v1.1 MD03G1195700.v1.1 MD09G1071300.v1.1 MD11G1212100.v1.1 MD17G1101300.v1.1
prunus_persica	Prupe.3G213700_v2.0.a1 Prupe.4G220400_v2.0.a1
pyrus_communis	pycom03g14790 pycom09g03480 pycom17g09560 pycom17g09570
rosa_chinensis	RchiOBHm_Chr2g0158621 RchiOBHm_Chr5g0041001
rosa_laevigata	RLG00000021100 RLG00000034019
rosa_multiflora	Rmu_co8379437.1_g000001 Rmu_sc0005650.1_g000010 Rmu_sc0030339.1_g000001 Rmu_sc0040010.1_g000001 Rmu_sc0042494.1_g000001 Rmu_ssc0000284.1_g000007
rosa_roxburghii	Rroxscaffold_1G00039700 Rroxscaffold_2G00091170
rosa_rugosa	Rorug02G0471000 Rorug05G0189400
rosa_samantha	Rh2AG536600 Rh2BG549700 Rh2CG520300 Rh2DG559400 Rh5AG274600 Rh5BG279900 Rh5CG312000 Rh5DG287900
rosa_wichuraiana	Rw2G044420 Rw5G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	589
AatII	GACGTC	2 cut(s)	12, 1721
Acc36I	ACCTGC	1 cut(s)	1220
AccB1I	GGYRCC	1 cut(s)	757
AccI	GTMKAC	1 cut(s)	1790
AccII	CGCG	4 cut(s)	135, 144, 152, 269
AciI	CCGC	8 cut(s)	60, 64, 138, 150, 329, 684, 859, 1416
AclWI	GGATC	5 cut(s)	206, 229, 638, 1482, 1933
AcoI	YGGCCR	4 cut(s)	3, 57, 1600, 1615
AcsI	RAATTY	2 cut(s)	370, 873
AcyI	GRCGYC	2 cut(s)	9, 1718
AfaI	GTAC	5 cut(s)	508, 1250, 1438, 1770, 1974
AfiI	CCNNNNNNNGG	2 cut(s)	55, 328
AgsI	TTSAA	8 cut(s)	377, 839, 1212, 1700, 1747, 1784, 1822, 1936
AhdI	GACNNNNNGTC	1 cut(s)	1717
AjnI	CCWGG	6 cut(s)	689, 760, 1034, 1683, 1737, 1794
AluBI	AGCT	6 cut(s)	244, 307, 334, 401, 479, 1839
AluI	AGCT	6 cut(s)	244, 307, 334, 401, 479, 1839
Alw21I	GWGCWC	3 cut(s)	246, 741, 952
Alw26I	GTCTC	2 cut(s)	78, 359
AlwI	GGATC	5 cut(s)	206, 229, 638, 1482, 1933
AlwNI	CAGNNNCTG	2 cut(s)	190, 1235
Ama87I	CYCGRG	1 cut(s)	116
AoxI	GGCC	9 cut(s)	3, 57, 199, 217, 687, 926, 1600, 1615, 1761
ApaI	GGGCCC	1 cut(s)	1765
ApeKI	GCWGC	6 cut(s)	43, 146, 229, 1408, 1411, 1859
ApoI	RAATTY	2 cut(s)	370, 873
ArsI	GACNNNNNNTTYG	2 cut(s)	1686, 1718
Asp700I	GAANNNNTTC	1 cut(s)	1779
AspLEI	GCGC	3 cut(s)	48, 137, 146
AspS9I	GGNCC	7 cut(s)	200, 457, 687, 1032, 1232, 1761, 1762
AsuC2I	CCSGG	1 cut(s)	216
AsuHPI	GGTGA	2 cut(s)	564, 870
AsuII	TTCGAA	1 cut(s)	157
AvaI	CYCGRG	1 cut(s)	116
AvaII	GGWCC	3 cut(s)	457, 1032, 1232
AxyI	CCTNAGG	1 cut(s)	1449
BaeGI	GKGCMC	2 cut(s)	127, 1765
BalI	TGGCCA	1 cut(s)	1602
BanI	GGYRCC	1 cut(s)	757
BanII	GRGCYC	2 cut(s)	246, 1765
Bbv12I	GWGCWC	3 cut(s)	246, 741, 952
BbvI	GCAGC	6 cut(s)	55, 158, 241, 1395, 1398, 1846
BccI	CCATC	5 cut(s)	838, 998, 1022, 1172, 1586
BceAI	ACGGC	2 cut(s)	214, 1630
BciT130I	CCWGG	6 cut(s)	691, 762, 1036, 1685, 1739, 1796
BclI	TGATCA	2 cut(s)	1045, 1237
BcnI	CCSGG	1 cut(s)	216
BcoDI	GTCTC	2 cut(s)	78, 359
BfaI	CTAG	3 cut(s)	825, 1107, 1845
BfmI	CTRYAG	2 cut(s)	1284, 1852
BfoI	RGCGCY	1 cut(s)	49
BfuAI	ACCTGC	1 cut(s)	1220
BglII	AGATCT	1 cut(s)	1372
BisI	GCNGC	9 cut(s)	44, 60, 138, 147, 150, 230, 1409, 1412, 1860
BlsI	GCNGC	9 cut(s)	45, 61, 139, 148, 151, 231, 1410, 1413, 1861
Bme1390I	CCNGG	7 cut(s)	216, 691, 762, 1036, 1685, 1739, 1796
Bme18I	GGWCC	3 cut(s)	457, 1032, 1232
BmeRI	GACNNNNNGTC	1 cut(s)	1717
BmeT110I	CYCGRG	1 cut(s)	116
BmgT120I	GGNCC	7 cut(s)	200, 457, 687, 1032, 1232, 1761, 1762
BmiI	GGNNCC	7 cut(s)	100, 202, 688, 759, 1033, 1267, 1763
BmrFI	CCNGG	7 cut(s)	216, 691, 762, 1036, 1685, 1739, 1796
BmsI	GCATC	4 cut(s)	349, 505, 719, 1025
BpmI	CTGGAG	3 cut(s)	53, 423, 608
Bpu10I	CCTNAGC	2 cut(s)	14, 951
Bpu14I	TTCGAA	1 cut(s)	157
BpuEI	CTTGAG	3 cut(s)	260, 442, 1187
BpuMI	CCSGG	1 cut(s)	216
BsaBI	GATNNNNATC	2 cut(s)	210, 1044
BsaHI	GRCGYC	2 cut(s)	9, 1718
Bsc4I	CCNNNNNNNGG	2 cut(s)	55, 328
Bse1I	ACTGG	5 cut(s)	70, 508, 591, 1603, 1705
Bse21I	CCTNAGG	1 cut(s)	1449
Bse8I	GATNNNNATC	2 cut(s)	210, 1044
BseBI	CCWGG	6 cut(s)	691, 762, 1036, 1685, 1739, 1796
BseGI	GGATG	5 cut(s)	364, 474, 520, 867, 1966
BseJI	GATNNNNATC	2 cut(s)	210, 1044
BseLI	CCNNNNNNNGG	2 cut(s)	55, 328
BseMII	CTCAG	7 cut(s)	354, 771, 901, 965, 1440, 1551, 1981
BseNI	ACTGG	5 cut(s)	70, 508, 591, 1603, 1705
BseRI	GAGGAG	1 cut(s)	1088
BseSI	GKGCMC	2 cut(s)	127, 1765
BseXI	GCAGC	6 cut(s)	55, 158, 241, 1395, 1398, 1846
BsgI	GTGCAG	1 cut(s)	651
Bsh1236I	CGCG	4 cut(s)	135, 144, 152, 269
BshFI	GGCC	9 cut(s)	5, 59, 201, 219, 689, 928, 1602, 1617, 1763
BshNI	GGYRCC	1 cut(s)	757
BsiHKAI	GWGCWC	3 cut(s)	246, 741, 952
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	1 cut(s)	216
BslFI	GGGAC	2 cut(s)	151, 1045
BslI	CCNNNNNNNGG	2 cut(s)	55, 328
BsmAI	GTCTC	2 cut(s)	78, 359
BsmBI	CGTCTC	1 cut(s)	359
BsmFI	GGGAC	2 cut(s)	151, 1045
BsnI	GGCC	9 cut(s)	5, 59, 201, 219, 689, 928, 1602, 1617, 1763
BsoBI	CYCGRG	1 cut(s)	116
Bsp119I	TTCGAA	1 cut(s)	157
Bsp120I	GGGCCC	1 cut(s)	1761
Bsp1286I	GDGCHC	5 cut(s)	127, 246, 741, 952, 1765
Bsp1407I	TGTACA	2 cut(s)	1768, 1972
Bsp19I	CCATGG	1 cut(s)	54
Bsp68I	TCGCGA	1 cut(s)	269
BspACI	CCGC	8 cut(s)	60, 64, 138, 150, 329, 684, 859, 1416
BspANI	GGCC	9 cut(s)	5, 59, 201, 219, 689, 928, 1602, 1617, 1763
BspCNI	CTCAG	7 cut(s)	355, 772, 900, 964, 1441, 1550, 1980
BspFNI	CGCG	4 cut(s)	135, 144, 152, 269
BspHI	TCATGA	2 cut(s)	1048, 1114
BspLI	GGNNCC	7 cut(s)	100, 202, 688, 759, 1033, 1267, 1763
BspMAI	CTGCAG	2 cut(s)	1288, 1856
BspMI	ACCTGC	1 cut(s)	1220
BspPI	GGATC	5 cut(s)	206, 229, 638, 1482, 1933
BspQI	GCTCTTC	1 cut(s)	251
BspT104I	TTCGAA	1 cut(s)	157
BspT107I	GGYRCC	1 cut(s)	757
BsrGI	TGTACA	2 cut(s)	1768, 1972
BsrI	ACTGG	5 cut(s)	70, 508, 591, 1603, 1705
BssNI	GRCGYC	2 cut(s)	9, 1718
BssT1I	CCWWGG	5 cut(s)	54, 460, 1353, 1513, 1942
Bst2UI	CCWGG	6 cut(s)	691, 762, 1036, 1685, 1739, 1796
Bst4CI	ACNGT	1 cut(s)	1780
Bst6I	CTCTTC	3 cut(s)	251, 342, 834
BstACI	GRCGYC	2 cut(s)	9, 1718
BstAUI	TGTACA	2 cut(s)	1768, 1972
BstBI	TTCGAA	1 cut(s)	157
BstC8I	GCNNGC	4 cut(s)	64, 123, 142, 1416
BstDEI	CTNAG	9 cut(s)	14, 363, 780, 887, 951, 1130, 1449, 1537, 1967
BstDSI	CCRYGG	1 cut(s)	54
BstF5I	GGATG	5 cut(s)	364, 474, 520, 867, 1966
BstFNI	CGCG	4 cut(s)	135, 144, 152, 269
BstH2I	RGCGCY	1 cut(s)	49
BstHHI	GCGC	3 cut(s)	48, 137, 146
BstMAI	GTCTC	2 cut(s)	78, 359
BstMWI	GCNNNNNNNGC	4 cut(s)	141, 143, 146, 1424
BstNI	CCWGG	6 cut(s)	691, 762, 1036, 1685, 1739, 1796
BstNSI	RCATGY	1 cut(s)	859
BstSCI	CCNGG	7 cut(s)	214, 689, 760, 1034, 1683, 1737, 1794
BstSFI	CTRYAG	2 cut(s)	1284, 1852
BstSLI	GKGCMC	2 cut(s)	127, 1765
BstUI	CGCG	4 cut(s)	135, 144, 152, 269
BstV1I	GCAGC	6 cut(s)	55, 158, 241, 1395, 1398, 1846
BstX2I	RGATCY	4 cut(s)	234, 1372, 1474, 1938
BstYI	RGATCY	4 cut(s)	234, 1372, 1474, 1938
Bsu36I	CCTNAGG	1 cut(s)	1449
BsuRI	GGCC	9 cut(s)	5, 59, 201, 219, 689, 928, 1602, 1617, 1763
BtgI	CCRYGG	1 cut(s)	54
BtsCI	GGATG	5 cut(s)	364, 474, 520, 867, 1966
BtsI	GCAGTG	1 cut(s)	188
BtsIMutI	CAGTG	3 cut(s)	188, 584, 1975
BtuMI	TCGCGA	1 cut(s)	269
BveI	ACCTGC	1 cut(s)	1220
Cac8I	GCNNGC	4 cut(s)	64, 123, 142, 1416
CaiI	CAGNNNCTG	2 cut(s)	190, 1235
CciI	TCATGA	2 cut(s)	1048, 1114
CfoI	GCGC	3 cut(s)	48, 137, 146
Cfr13I	GGNCC	7 cut(s)	200, 457, 687, 1032, 1232, 1761, 1762
Csp6I	GTAC	5 cut(s)	507, 1249, 1437, 1769, 1973
CspCI	CAANNNNNGTGG	2 cut(s)	1050, 1085
CviQI	GTAC	5 cut(s)	507, 1249, 1437, 1769, 1973
DdeI	CTNAG	9 cut(s)	14, 363, 780, 887, 951, 1130, 1449, 1537, 1967
DrdI	GACNNNNNNGTC	1 cut(s)	589
DriI	GACNNNNNGTC	1 cut(s)	1717
DseDI	GACNNNNNNGTC	1 cut(s)	589
EaeI	YGGCCR	4 cut(s)	3, 57, 1600, 1615
Eam1104I	CTCTTC	3 cut(s)	251, 342, 834
Eam1105I	GACNNNNNGTC	1 cut(s)	1717
EarI	CTCTTC	3 cut(s)	251, 342, 834
EciI	GGCGGA	1 cut(s)	344
Ecl136II	GAGCTC	1 cut(s)	244
Eco130I	CCWWGG	5 cut(s)	54, 460, 1353, 1513, 1942
Eco24I	GRGCYC	2 cut(s)	246, 1765
Eco47I	GGWCC	3 cut(s)	457, 1032, 1232
Eco53kI	GAGCTC	1 cut(s)	244
Eco81I	CCTNAGG	1 cut(s)	1449
Eco88I	CYCGRG	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	244
EcoO109I	RGGNCCY	3 cut(s)	457, 1032, 1232
EcoRII	CCWGG	6 cut(s)	689, 760, 1034, 1683, 1737, 1794
EcoT14I	CCWWGG	5 cut(s)	54, 460, 1353, 1513, 1942
EcoT38I	GRGCYC	2 cut(s)	246, 1765
ErhI	CCWWGG	5 cut(s)	54, 460, 1353, 1513, 1942
Esp3I	CGTCTC	1 cut(s)	359
FalI	AAGNNNNNCTT	4 cut(s)	376, 408, 1740, 1772
FaqI	GGGAC	2 cut(s)	151, 1045
FauI	CCCGC	3 cut(s)	71, 677, 1423
FauNDI	CATATG	1 cut(s)	1901
FbaI	TGATCA	2 cut(s)	1045, 1237
FblI	GTMKAC	1 cut(s)	1790
Fnu4HI	GCNGC	9 cut(s)	44, 60, 138, 147, 150, 230, 1409, 1412, 1860
FokI	GGATG	5 cut(s)	371, 481, 527, 874, 1973
FriOI	GRGCYC	2 cut(s)	246, 1765
Fsp4HI	GCNGC	9 cut(s)	44, 60, 138, 147, 150, 230, 1409, 1412, 1860
FspBI	CTAG	3 cut(s)	825, 1107, 1845
GlaI	GCGC	3 cut(s)	47, 136, 145
GluI	GCNGC	9 cut(s)	44, 60, 138, 147, 150, 230, 1409, 1412, 1860
GsuI	CTGGAG	3 cut(s)	53, 423, 608
HaeII	RGCGCY	1 cut(s)	49
HaeIII	GGCC	9 cut(s)	5, 59, 201, 219, 689, 928, 1602, 1617, 1763
HapII	CCGG	1 cut(s)	216
HhaI	GCGC	3 cut(s)	48, 137, 146
Hin1I	GRCGYC	2 cut(s)	9, 1718
Hin6I	GCGC	3 cut(s)	46, 135, 144
HinP1I	GCGC	3 cut(s)	46, 135, 144
HpaII	CCGG	1 cut(s)	216
HphI	GGTGA	2 cut(s)	564, 870
Hpy166II	GTNNAC	5 cut(s)	439, 1690, 1791, 1973, 1975
Hpy188I	TCNGA	9 cut(s)	211, 445, 660, 754, 781, 802, 1270, 1372, 1540
Hpy188III	TCNNGA	8 cut(s)	250, 268, 953, 1049, 1115, 1235, 1448, 1958
Hpy8I	GTNNAC	5 cut(s)	439, 1690, 1791, 1973, 1975
Hpy99I	CGWCG	2 cut(s)	11, 110
HpyAV	CCTTC	6 cut(s)	97, 674, 918, 1502, 1512, 1828
HpyCH4III	ACNGT	1 cut(s)	1780
HpyCH4IV	ACGT	2 cut(s)	9, 1718
HpyF10VI	GCNNNNNNNGC	4 cut(s)	141, 143, 146, 1424
HpyF3I	CTNAG	9 cut(s)	14, 363, 780, 887, 951, 1130, 1449, 1537, 1967
HpySE526I	ACGT	2 cut(s)	9, 1718
Hsp92I	GRCGYC	2 cut(s)	9, 1718
HspAI	GCGC	3 cut(s)	46, 135, 144
Ksp22I	TGATCA	2 cut(s)	1045, 1237
LguI	GCTCTTC	1 cut(s)	251
LmnI	GCTCC	5 cut(s)	104, 304, 331, 1387, 1867
Lsp1109I	GCAGC	6 cut(s)	55, 158, 241, 1395, 1398, 1846
LweI	GCATC	4 cut(s)	349, 505, 719, 1025
MaeI	CTAG	3 cut(s)	825, 1107, 1845
MaeII	ACGT	2 cut(s)	9, 1718
MaeIII	GTNAC	3 cut(s)	570, 847, 1847
MflI	RGATCY	4 cut(s)	234, 1372, 1474, 1938
MhlI	GDGCHC	5 cut(s)	127, 246, 741, 952, 1765
MlsI	TGGCCA	1 cut(s)	1602
MluCI	AATT	7 cut(s)	253, 282, 370, 671, 873, 1302, 1695
MluNI	TGGCCA	1 cut(s)	1602
MlyI	GAGTC	2 cut(s)	599, 740
MmeI	TCCRAC	2 cut(s)	126, 1889
Mox20I	TGGCCA	1 cut(s)	1602
MroXI	GAANNNNTTC	1 cut(s)	1779
MscI	TGGCCA	1 cut(s)	1602
MseI	TTAA	5 cut(s)	285, 701, 984, 1193, 1305
MslI	CAYNNNNRTG	4 cut(s)	860, 943, 1026, 1644
Msp20I	TGGCCA	1 cut(s)	1602
MspI	CCGG	1 cut(s)	216
MspR9I	CCNGG	7 cut(s)	216, 691, 762, 1036, 1685, 1739, 1796
MvaI	CCWGG	6 cut(s)	691, 762, 1036, 1685, 1739, 1796
MvnI	CGCG	4 cut(s)	135, 144, 152, 269
MwoI	GCNNNNNNNGC	4 cut(s)	141, 143, 146, 1424
NciI	CCSGG	1 cut(s)	216
NcoI	CCATGG	1 cut(s)	54
NdeI	CATATG	1 cut(s)	1901
NlaIV	GGNNCC	7 cut(s)	100, 202, 688, 759, 1033, 1267, 1763
NmeAIII	GCCGAG	1 cut(s)	75
NmuCI	GTSAC	2 cut(s)	570, 1847
NruI	TCGCGA	1 cut(s)	269
NspI	RCATGY	1 cut(s)	859
NspV	TTCGAA	1 cut(s)	157
PaeR7I	CTCGAG	1 cut(s)	116
PagI	TCATGA	2 cut(s)	1048, 1114
PasI	CCCWGGG	1 cut(s)	1795
PciSI	GCTCTTC	1 cut(s)	251
PcsI	WCGNNNNNNNCGW	2 cut(s)	102, 114
PdmI	GAANNNNTTC	1 cut(s)	1779
PfeI	GAWTC	9 cut(s)	154, 206, 431, 472, 784, 956, 974, 1203, 1276
PkrI	GCNGC	9 cut(s)	45, 61, 139, 148, 151, 231, 1410, 1413, 1861
PleI	GAGTC	2 cut(s)	598, 740
PpsI	GAGTC	2 cut(s)	598, 740
PpuMI	RGGWCCY	3 cut(s)	457, 1032, 1232
Psp124BI	GAGCTC	1 cut(s)	246
Psp5II	RGGWCCY	3 cut(s)	457, 1032, 1232
Psp6I	CCWGG	6 cut(s)	689, 760, 1034, 1683, 1737, 1794
PspGI	CCWGG	6 cut(s)	689, 760, 1034, 1683, 1737, 1794
PspN4I	GGNNCC	7 cut(s)	100, 202, 688, 759, 1033, 1267, 1763
PspOMI	GGGCCC	1 cut(s)	1761
PspPI	GGNCC	7 cut(s)	200, 457, 687, 1032, 1232, 1761, 1762
PspPPI	RGGWCCY	3 cut(s)	457, 1032, 1232
PspXI	VCTCGAGB	1 cut(s)	116
PstI	CTGCAG	2 cut(s)	1288, 1856
PstNI	CAGNNNCTG	2 cut(s)	190, 1235
PsuI	RGATCY	4 cut(s)	234, 1372, 1474, 1938
RruI	TCGCGA	1 cut(s)	269
RsaI	GTAC	5 cut(s)	508, 1250, 1438, 1770, 1974
RsaNI	GTAC	5 cut(s)	507, 1249, 1437, 1769, 1973
RseI	CAYNNNNRTG	4 cut(s)	860, 943, 1026, 1644
SacI	GAGCTC	1 cut(s)	246
SapI	GCTCTTC	1 cut(s)	251
SaqAI	TTAA	5 cut(s)	285, 701, 984, 1193, 1305
SatI	GCNGC	9 cut(s)	44, 60, 138, 147, 150, 230, 1409, 1412, 1860
Sau96I	GGNCC	7 cut(s)	200, 457, 687, 1032, 1232, 1761, 1762
SchI	GAGTC	2 cut(s)	599, 740
ScrFI	CCNGG	7 cut(s)	216, 691, 762, 1036, 1685, 1739, 1796
SduI	GDGCHC	5 cut(s)	127, 246, 741, 952, 1765
SfaNI	GCATC	4 cut(s)	349, 505, 719, 1025
SfcI	CTRYAG	2 cut(s)	1284, 1852
Sfr274I	CTCGAG	1 cut(s)	116
SfuI	TTCGAA	1 cut(s)	157
SinI	GGWCC	3 cut(s)	457, 1032, 1232
SlaI	CTCGAG	1 cut(s)	116
SmiMI	CAYNNNNRTG	4 cut(s)	860, 943, 1026, 1644
SmlI	CTYRAG	4 cut(s)	116, 239, 421, 1166
SmoI	CTYRAG	4 cut(s)	116, 239, 421, 1166
Sse9I	AATT	7 cut(s)	253, 282, 370, 671, 873, 1302, 1695
SsiI	CCGC	8 cut(s)	60, 64, 138, 150, 329, 684, 859, 1416
SspI	AATATT	1 cut(s)	1830
SspMI	CTAG	3 cut(s)	825, 1107, 1845
SstI	GAGCTC	1 cut(s)	246
StyD4I	CCNGG	7 cut(s)	214, 689, 760, 1034, 1683, 1737, 1794
StyI	CCWWGG	5 cut(s)	54, 460, 1353, 1513, 1942
TaaI	ACNGT	1 cut(s)	1780
TaiI	ACGT	2 cut(s)	12, 1721
TaqI	TCGA	6 cut(s)	117, 157, 222, 345, 475, 581
TasI	AATT	7 cut(s)	253, 282, 370, 671, 873, 1302, 1695
TatI	WGTACW	2 cut(s)	1768, 1972
TauI	GCSGC	3 cut(s)	62, 140, 152
TfiI	GAWTC	9 cut(s)	154, 206, 431, 472, 784, 956, 974, 1203, 1276
Tru1I	TTAA	5 cut(s)	285, 701, 984, 1193, 1305
Tru9I	TTAA	5 cut(s)	285, 701, 984, 1193, 1305
TscAI	CASTG	3 cut(s)	195, 591, 1975
TseFI	GTSAC	2 cut(s)	570, 1847
TseI	GCWGC	6 cut(s)	43, 146, 229, 1408, 1411, 1859
Tsp45I	GTSAC	2 cut(s)	570, 1847
TspGWI	ACGGA	1 cut(s)	524
TspRI	CASTG	3 cut(s)	195, 591, 1975
VpaK11BI	GGWCC	3 cut(s)	457, 1032, 1232
XapI	RAATTY	2 cut(s)	370, 873
XceI	RCATGY	1 cut(s)	859
XhoI	CTCGAG	1 cut(s)	116
XmiI	GTMKAC	1 cut(s)	1790
XmnI	GAANNNNTTC	1 cut(s)	1779
XspI	CTAG	3 cut(s)	825, 1107, 1845
ZraI	GACGTC	2 cut(s)	10, 1719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.