Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002141

Physical Location & Seq

Genomic Coordinates Reverse (-)

12787322 .. 12792042

Gene Structure 4721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00091170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGGCCGACGTCCTAAGCCCCGACCCAACCACCACCCAGAAGCAGCGCCTCTCCATGGCCGCCCGCCTCCAGTCCCCCACCAGCCCCTTCTTCCTCGGCTCCAACGACGACCACCTCGAGCGTGCCCAGGCACGCGCCGCACGCGCCGCCGCCATTCGAAGAAAGTCCCTCGCCCTCAATCGTCAGCCACTGCTTGACGGCCCCGATTCCGATCCCGGCCTCGATAAGCAGCAGATCCTTGAGCTCTTCCAGAATTGTATAAAACTCGCGAGTGAAAACAAAATTAATCAAAAGAATACTTGGGAGCTGAACTTGATTGACCATTTGGCGGAGCTTGTTAAGGTTGAAGAGGAAAAGGATGCAGAGACGAATTTTCAAAAGGCAAGCTGTACTTTGGAAGCTGGAGTGAAGATTTACTCCTTGAGAGTTGATTCAGTTCACTCTGAGGCATACAAGGTCCTTGGTGGGATGAATCGAGCTGGACAAGACAATGAACAAGGTGAGATTCTTGATACTGGTACGGAGGAAGCCAATGCTGATAATGAACAAGATATGGCTACTTCCAAAAAAGAGAGAAAGATGTCACCTTTATCGACACTGGAGTCATCTTTTGAGGCTCTAAATGTGAAAAAGTTTGATGTTGCATTTGCAGTTGACCCGCTCTATCATCAGACATCTGCACAATTTGATGAAGGCGGGGCCAGGGGTCTTTTGATGAATAATCTTGGAGTATATGGTAGATGCAGAGTGCTCTTTGACTCATCGGAGGTACCAGGGAAGTGCATATCATCTGATAATCAACAGGATAAATCAGATACCATTGATCTTTCTTTTGCTACTGAATATGTTGAAGAGATGGTAACGAACATGCGGATGAAAGATGAAATTTCACCAACTCTCAGGCATTTGGTTGATAGATTTGATGAAGATAACAGAAGGCTGCCAGATACATATTCATGTGCTCAGGAATCAGCAGAGCAAGATGATTCTACCTATAATAATGACATTGACATAGATGGTGGTGATGCATCTCACAATGATGGGACCTGGGATTATGATCATGATGAGCAAACAAGCATGGTGGAGGAGGAACATAACTATGAAAATACAAGTTTCCCTAGTTATCATGAGGAAAATGAACCAAGTTCTTTCCATGAACCTGATTTTGATGACAGACTTGAGAAAGTTGATGGCTTTTTGTTTATAAGTCTTGGATTCACTTCAAAACAAAATGCTTGGGCAGGTCCTGATCATTGGAAGTATCAAAAAACTAAAGGTTCCGTGGTGAATCGTCCTGCAGAACCACCATTAACAATTAAGCGACAAAGAAGCAAACAACTGCCTGATATTGATTTCACAAAAGCCTTGGATGAAGAAATGTCAGATCTATTTGCTCCCCCAAAAACCCCAAGTCGTTGCTGCTGCCCACAAATAGAGCAATTTGCATGCCTTGGAAGGAGAGGGAGGAAGTCCTCAGATCAATCAAGGCAACAATATGATGATTGTGGGCAATCTTCATTTTGTGATGATGGTGGTGGCCAGTATGATGATGACCAATATGACGAGGGAAATGTCCATAGTGATGTAGAGGACTTTAGCACACTTGTTTCTCAACCTCGCCAGGTAAACAAAATAGAAGTCCAGTATGACAAGACGTCCAAACAAGTTGATGTCCAGGCTTTGAAAGAAGCCCTTTGGGGCCATGTACAAGAAACTGTTCAAATGTCTACCCAGGGCGAAGAACAGGTGGTGTCCTTCAAGCAAATATTGGGTAGCTTTCCTAGTGACTGCAGAGCTGCTCCAACTATCAATGACATCTCCCCTCATCTGTGTTTCATATGCCTGTTGCATTTAGCCAATGAGCATGGGTTGAAGATCCTCGGCAATACCAATCTGGATGATCTCAGTGTACACCTACCTCTCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000793 GO:0000794 GO:0000796 GO:0000799 GO:0000819 GO:0001671 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006323 GO:0006996 GO:0007049 GO:0007059 GO:0007076 GO:0008047 GO:0008150 GO:0009987 GO:0010911 GO:0010912 GO:0016043 GO:0019899 GO:0022402 GO:0030234 GO:0030261 GO:0031974 GO:0031981 GO:0032781 GO:0032991 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044547 GO:0044815 GO:0048285 GO:0050790 GO:0051276 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0071103 GO:0071840 GO:0072586 GO:0072587 GO:0098772 GO:0098813 GO:0140014 GO:1903047 GO:2000371 GO:2000373

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd2

Protein Analysis

642

Amino Acids

72.14

Weight (kDa)

4.64

Isoelectric Point (pI)

50.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cnd2	PF05786	28 - 471	3.8e-77	Condensin complex subunit 2
Cnd2	PF05786	522 - 637	1.3e-25	Condensin complex subunit 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32590
fragaria_vesca	FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_6g42730 FvH4_6g42730 FvH4_6g42730
malus_domestica	MD03G1195600.v1.1 MD03G1195700.v1.1 MD09G1071300.v1.1 MD11G1212100.v1.1 MD17G1101300.v1.1
prunus_persica	Prupe.3G213700_v2.0.a1 Prupe.4G220400_v2.0.a1
pyrus_communis	pycom03g14790 pycom09g03480 pycom17g09560 pycom17g09570
rosa_chinensis	RchiOBHm_Chr2g0158621 RchiOBHm_Chr5g0041001
rosa_laevigata	RLG00000021100 RLG00000034019
rosa_multiflora	Rmu_co8379437.1_g000001 Rmu_sc0005650.1_g000010 Rmu_sc0030339.1_g000001 Rmu_sc0040010.1_g000001 Rmu_sc0042494.1_g000001 Rmu_ssc0000284.1_g000007
rosa_roxburghii	Rroxscaffold_1G00039700 Rroxscaffold_2G00091170
rosa_rugosa	Rorug02G0471000 Rorug05G0189400
rosa_samantha	Rh2AG536600 Rh2BG549700 Rh2CG520300 Rh2DG559400 Rh5AG274600 Rh5BG279900 Rh5CG312000 Rh5DG287900
rosa_wichuraiana	Rw2G044420 Rw5G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1205
AasI	GACNNNNNNGTC	1 cut(s)	601
AatII	GACGTC	2 cut(s)	12, 1658
Acc36I	ACCTGC	1 cut(s)	1232
Acc65I	GGTACC	1 cut(s)	769
AccB1I	GGYRCC	1 cut(s)	769
AccBSI	CCGCTC	1 cut(s)	661
AccI	GTMKAC	1 cut(s)	1727
AccII	CGCG	3 cut(s)	135, 144, 269
AciI	CCGC	9 cut(s)	60, 64, 138, 147, 150, 329, 659, 696, 871
AclWI	GGATC	3 cut(s)	206, 229, 1870
AcoI	YGGCCR	3 cut(s)	3, 57, 1537
AcsI	RAATTY	2 cut(s)	370, 885
AcyI	GRCGYC	2 cut(s)	9, 1655
AfaI	GTAC	5 cut(s)	391, 520, 771, 1707, 1911
AfiI	CCNNNNNNNGG	2 cut(s)	55, 328
AgsI	TTSAA	8 cut(s)	347, 377, 851, 1224, 1684, 1721, 1759, 1873
AhdI	GACNNNNNGTC	1 cut(s)	1654
AjnI	CCWGG	7 cut(s)	126, 701, 772, 1046, 1620, 1674, 1731
AluBI	AGCT	8 cut(s)	244, 307, 334, 387, 401, 479, 1776, 1796
AluI	AGCT	8 cut(s)	244, 307, 334, 387, 401, 479, 1776, 1796
Alw21I	GWGCWC	3 cut(s)	246, 753, 964
Alw26I	GTCTC	1 cut(s)	359
AlwI	GGATC	3 cut(s)	206, 229, 1870
AlwNI	CAGNNNCTG	2 cut(s)	190, 1247
Ama87I	CYCGRG	1 cut(s)	116
AoxI	GGCC	7 cut(s)	3, 57, 199, 217, 699, 1537, 1699
ApeKI	GCWGC	6 cut(s)	43, 229, 940, 1419, 1422, 1796
ApoI	RAATTY	2 cut(s)	370, 885
ArsI	GACNNNNNNTTYG	2 cut(s)	1623, 1655
AseI	ATTAAT	1 cut(s)	285
Asp700I	GAANNNNTTC	1 cut(s)	1716
Asp718I	GGTACC	1 cut(s)	769
AspLEI	GCGC	3 cut(s)	48, 137, 146
AspS9I	GGNCC	6 cut(s)	200, 457, 699, 1044, 1244, 1699
AsuC2I	CCSGG	1 cut(s)	216
AsuHPI	GGTGA	5 cut(s)	512, 576, 882, 1034, 1297
AsuII	TTCGAA	1 cut(s)	157
AvaI	CYCGRG	1 cut(s)	116
AvaII	GGWCC	3 cut(s)	457, 1044, 1244
BaeGI	GKGCMC	1 cut(s)	127
BalI	TGGCCA	1 cut(s)	1539
BanI	GGYRCC	1 cut(s)	769
BanII	GRGCYC	1 cut(s)	246
Bbv12I	GWGCWC	3 cut(s)	246, 753, 964
BbvI	GCAGC	6 cut(s)	55, 241, 927, 1406, 1409, 1783
BccI	CCATC	5 cut(s)	850, 1010, 1034, 1184, 1523
BceAI	ACGGC	1 cut(s)	214
BciT130I	CCWGG	7 cut(s)	128, 703, 774, 1048, 1622, 1676, 1733
BclI	TGATCA	2 cut(s)	1057, 1249
BcnI	CCSGG	1 cut(s)	216
BcoDI	GTCTC	1 cut(s)	359
BfaI	CTAG	2 cut(s)	1119, 1782
BfmI	CTRYAG	2 cut(s)	1296, 1789
BfoI	RGCGCY	1 cut(s)	49
BfuAI	ACCTGC	1 cut(s)	1232
BglII	AGATCT	1 cut(s)	1384
Bme1390I	CCNGG	8 cut(s)	128, 216, 703, 774, 1048, 1622, 1676, 1733
Bme18I	GGWCC	3 cut(s)	457, 1044, 1244
BmeRI	GACNNNNNGTC	1 cut(s)	1654
BmeT110I	CYCGRG	1 cut(s)	116
BmgT120I	GGNCC	6 cut(s)	200, 457, 699, 1044, 1244, 1699
BmiI	GGNNCC	7 cut(s)	100, 202, 700, 771, 1045, 1279, 1700
BmrFI	CCNGG	8 cut(s)	128, 216, 703, 774, 1048, 1622, 1676, 1733
BmsI	GCATC	4 cut(s)	349, 731, 1015, 1037
BpmI	CTGGAG	3 cut(s)	53, 423, 620
Bpu10I	CCTNAGC	2 cut(s)	14, 963
Bpu14I	TTCGAA	1 cut(s)	157
BpuEI	CTTGAG	3 cut(s)	260, 442, 1199
BpuMI	CCSGG	1 cut(s)	216
BsaBI	GATNNNNATC	2 cut(s)	210, 1056
BsaHI	GRCGYC	2 cut(s)	9, 1655
Bsc4I	CCNNNNNNNGG	2 cut(s)	55, 328
Bse1I	ACTGG	5 cut(s)	70, 520, 603, 1540, 1642
Bse8I	GATNNNNATC	2 cut(s)	210, 1056
BseBI	CCWGG	7 cut(s)	128, 703, 774, 1048, 1622, 1676, 1733
BseGI	GGATG	5 cut(s)	364, 474, 879, 1375, 1903
BseJI	GATNNNNATC	2 cut(s)	210, 1056
BseLI	CCNNNNNNNGG	2 cut(s)	55, 328
BseMII	CTCAG	5 cut(s)	435, 913, 977, 1488, 1918
BseNI	ACTGG	5 cut(s)	70, 520, 603, 1540, 1642
BseRI	GAGGAG	1 cut(s)	1100
BseSI	GKGCMC	1 cut(s)	127
BseXI	GCAGC	6 cut(s)	55, 241, 927, 1406, 1409, 1783
BsgI	GTGCAG	1 cut(s)	663
Bsh1236I	CGCG	3 cut(s)	135, 144, 269
BshFI	GGCC	7 cut(s)	5, 59, 201, 219, 701, 1539, 1701
BshNI	GGYRCC	1 cut(s)	769
BsiHKAI	GWGCWC	3 cut(s)	246, 753, 964
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	1 cut(s)	216
BslFI	GGGAC	3 cut(s)	58, 151, 1057
BslI	CCNNNNNNNGG	2 cut(s)	55, 328
BsmAI	GTCTC	1 cut(s)	359
BsmBI	CGTCTC	1 cut(s)	359
BsmFI	GGGAC	3 cut(s)	58, 151, 1057
BsnI	GGCC	7 cut(s)	5, 59, 201, 219, 701, 1539, 1701
BsoBI	CYCGRG	1 cut(s)	116
Bsp119I	TTCGAA	1 cut(s)	157
Bsp1286I	GDGCHC	4 cut(s)	127, 246, 753, 964
Bsp1407I	TGTACA	2 cut(s)	1705, 1909
Bsp143I	GATC	9 cut(s)	211, 234, 823, 1057, 1249, 1384, 1477, 1875, 1900
Bsp19I	CCATGG	1 cut(s)	54
Bsp68I	TCGCGA	1 cut(s)	269
BspACI	CCGC	9 cut(s)	60, 64, 138, 147, 150, 329, 659, 696, 871
BspANI	GGCC	7 cut(s)	5, 59, 201, 219, 701, 1539, 1701
BspCNI	CTCAG	5 cut(s)	436, 912, 976, 1487, 1917
BspFNI	CGCG	3 cut(s)	135, 144, 269
BspHI	TCATGA	2 cut(s)	1060, 1126
BspLI	GGNNCC	7 cut(s)	100, 202, 700, 771, 1045, 1279, 1700
BspMAI	CTGCAG	2 cut(s)	1300, 1793
BspMI	ACCTGC	1 cut(s)	1232
BspPI	GGATC	3 cut(s)	206, 229, 1870
BspQI	GCTCTTC	1 cut(s)	251
BspT104I	TTCGAA	1 cut(s)	157
BspT107I	GGYRCC	1 cut(s)	769
BsrBI	CCGCTC	1 cut(s)	661
BsrGI	TGTACA	2 cut(s)	1705, 1909
BsrI	ACTGG	5 cut(s)	70, 520, 603, 1540, 1642
BssMI	GATC	9 cut(s)	211, 234, 823, 1057, 1249, 1384, 1477, 1875, 1900
BssNI	GRCGYC	2 cut(s)	9, 1655
BssT1I	CCWWGG	4 cut(s)	54, 460, 1365, 1450
Bst2UI	CCWGG	7 cut(s)	128, 703, 774, 1048, 1622, 1676, 1733
Bst4CI	ACNGT	1 cut(s)	1717
Bst6I	CTCTTC	3 cut(s)	251, 342, 846
BstACI	GRCGYC	2 cut(s)	9, 1655
BstAUI	TGTACA	2 cut(s)	1705, 1909
BstBI	TTCGAA	1 cut(s)	157
BstC8I	GCNNGC	6 cut(s)	64, 123, 133, 142, 385, 1447
BstDEI	CTNAG	6 cut(s)	14, 444, 899, 963, 1474, 1904
BstDSI	CCRYGG	2 cut(s)	54, 1281
BstF5I	GGATG	5 cut(s)	364, 474, 879, 1375, 1903
BstFNI	CGCG	3 cut(s)	135, 144, 269
BstH2I	RGCGCY	1 cut(s)	49
BstHHI	GCGC	3 cut(s)	48, 137, 146
BstKTI	GATC	9 cut(s)	214, 237, 826, 1060, 1252, 1387, 1480, 1878, 1903
BstMAI	GTCTC	1 cut(s)	359
BstMBI	GATC	9 cut(s)	211, 234, 823, 1057, 1249, 1384, 1477, 1875, 1900
BstMWI	GCNNNNNNNGC	4 cut(s)	137, 141, 143, 146
BstNI	CCWGG	7 cut(s)	128, 703, 774, 1048, 1622, 1676, 1733
BstNSI	RCATGY	2 cut(s)	871, 1449
BstSCI	CCNGG	8 cut(s)	126, 214, 701, 772, 1046, 1620, 1674, 1731
BstSFI	CTRYAG	2 cut(s)	1296, 1789
BstSLI	GKGCMC	1 cut(s)	127
BstUI	CGCG	3 cut(s)	135, 144, 269
BstV1I	GCAGC	6 cut(s)	55, 241, 927, 1406, 1409, 1783
BstX2I	RGATCY	3 cut(s)	234, 1384, 1875
BstYI	RGATCY	3 cut(s)	234, 1384, 1875
BsuRI	GGCC	7 cut(s)	5, 59, 201, 219, 701, 1539, 1701
BtgI	CCRYGG	2 cut(s)	54, 1281
BtsCI	GGATG	5 cut(s)	364, 474, 879, 1375, 1903
BtsI	GCAGTG	1 cut(s)	188
BtsIMutI	CAGTG	3 cut(s)	188, 596, 1912
BtuMI	TCGCGA	1 cut(s)	269
BveI	ACCTGC	1 cut(s)	1232
Cac8I	GCNNGC	6 cut(s)	64, 123, 133, 142, 385, 1447
CaiI	CAGNNNCTG	2 cut(s)	190, 1247
CciI	TCATGA	2 cut(s)	1060, 1126
CfoI	GCGC	3 cut(s)	48, 137, 146
Cfr13I	GGNCC	6 cut(s)	200, 457, 699, 1044, 1244, 1699
Csp6I	GTAC	5 cut(s)	390, 519, 770, 1706, 1910
CspCI	CAANNNNNGTGG	2 cut(s)	1062, 1097
CviQI	GTAC	5 cut(s)	390, 519, 770, 1706, 1910
DdeI	CTNAG	6 cut(s)	14, 444, 899, 963, 1474, 1904
DpnI	GATC	9 cut(s)	213, 236, 825, 1059, 1251, 1386, 1479, 1877, 1902
DpnII	GATC	9 cut(s)	211, 234, 823, 1057, 1249, 1384, 1477, 1875, 1900
DrdI	GACNNNNNNGTC	1 cut(s)	601
DriI	GACNNNNNGTC	1 cut(s)	1654
DseDI	GACNNNNNNGTC	1 cut(s)	601
EaeI	YGGCCR	3 cut(s)	3, 57, 1537
Eam1104I	CTCTTC	3 cut(s)	251, 342, 846
Eam1105I	GACNNNNNGTC	1 cut(s)	1654
EarI	CTCTTC	3 cut(s)	251, 342, 846
EciI	GGCGGA	1 cut(s)	344
Ecl136II	GAGCTC	1 cut(s)	244
Eco130I	CCWWGG	4 cut(s)	54, 460, 1365, 1450
Eco24I	GRGCYC	1 cut(s)	246
Eco47I	GGWCC	3 cut(s)	457, 1044, 1244
Eco53kI	GAGCTC	1 cut(s)	244
Eco88I	CYCGRG	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	244
EcoO109I	RGGNCCY	3 cut(s)	457, 1044, 1244
EcoRII	CCWGG	7 cut(s)	126, 701, 772, 1046, 1620, 1674, 1731
EcoT14I	CCWWGG	4 cut(s)	54, 460, 1365, 1450
EcoT22I	ATGCAT	1 cut(s)	1030
EcoT38I	GRGCYC	1 cut(s)	246
ErhI	CCWWGG	4 cut(s)	54, 460, 1365, 1450
Esp3I	CGTCTC	1 cut(s)	359
FalI	AAGNNNNNCTT	4 cut(s)	376, 408, 1677, 1709
FaqI	GGGAC	3 cut(s)	58, 151, 1057
FauI	CCCGC	3 cut(s)	71, 666, 689
FauNDI	CATATG	1 cut(s)	1838
FbaI	TGATCA	2 cut(s)	1057, 1249
FblI	GTMKAC	1 cut(s)	1727
FokI	GGATG	5 cut(s)	371, 481, 886, 1382, 1910
FriOI	GRGCYC	1 cut(s)	246
FspBI	CTAG	2 cut(s)	1119, 1782
GlaI	GCGC	3 cut(s)	47, 136, 145
GsuI	CTGGAG	3 cut(s)	53, 423, 620
HaeII	RGCGCY	1 cut(s)	49
HaeIII	GGCC	7 cut(s)	5, 59, 201, 219, 701, 1539, 1701
HapII	CCGG	1 cut(s)	216
HhaI	GCGC	3 cut(s)	48, 137, 146
Hin1I	GRCGYC	2 cut(s)	9, 1655
Hin6I	GCGC	3 cut(s)	46, 135, 144
HinP1I	GCGC	3 cut(s)	46, 135, 144
HincII	GTYRAC	1 cut(s)	655
HindII	GTYRAC	1 cut(s)	655
HpaII	CCGG	1 cut(s)	216
HphI	GGTGA	5 cut(s)	512, 576, 882, 1034, 1297
Hpy166II	GTNNAC	6 cut(s)	439, 655, 1627, 1728, 1910, 1912
Hpy188I	TCNGA	8 cut(s)	211, 445, 672, 766, 793, 814, 1384, 1477
Hpy188III	TCNNGA	8 cut(s)	250, 268, 509, 965, 1061, 1127, 1247, 1895
Hpy8I	GTNNAC	6 cut(s)	439, 655, 1627, 1728, 1910, 1912
Hpy99I	CGWCG	2 cut(s)	11, 110
HpyAV	CCTTC	5 cut(s)	97, 686, 930, 1449, 1765
HpyCH4III	ACNGT	1 cut(s)	1717
HpyCH4IV	ACGT	2 cut(s)	9, 1655
HpyF10VI	GCNNNNNNNGC	4 cut(s)	137, 141, 143, 146
HpyF3I	CTNAG	6 cut(s)	14, 444, 899, 963, 1474, 1904
HpySE526I	ACGT	2 cut(s)	9, 1655
Hsp92I	GRCGYC	2 cut(s)	9, 1655
HspAI	GCGC	3 cut(s)	46, 135, 144
KpnI	GGTACC	1 cut(s)	773
Ksp22I	TGATCA	2 cut(s)	1057, 1249
Kzo9I	GATC	9 cut(s)	211, 234, 823, 1057, 1249, 1384, 1477, 1875, 1900
LguI	GCTCTTC	1 cut(s)	251
LmnI	GCTCC	5 cut(s)	104, 304, 331, 1399, 1804
Lsp1109I	GCAGC	6 cut(s)	55, 241, 927, 1406, 1409, 1783
LweI	GCATC	4 cut(s)	349, 731, 1015, 1037
MaeI	CTAG	2 cut(s)	1119, 1782
MaeII	ACGT	2 cut(s)	9, 1655
MaeIII	GTNAC	3 cut(s)	582, 859, 1784
MalI	GATC	9 cut(s)	213, 236, 825, 1059, 1251, 1386, 1479, 1877, 1902
MbiI	CCGCTC	1 cut(s)	661
MboI	GATC	9 cut(s)	211, 234, 823, 1057, 1249, 1384, 1477, 1875, 1900
MflI	RGATCY	3 cut(s)	234, 1384, 1875
MhlI	GDGCHC	4 cut(s)	127, 246, 753, 964
MlsI	TGGCCA	1 cut(s)	1539
MluCI	AATT	7 cut(s)	253, 282, 370, 683, 885, 1314, 1439
MluNI	TGGCCA	1 cut(s)	1539
MlyI	GAGTC	2 cut(s)	611, 752
MmeI	TCCRAC	2 cut(s)	126, 1826
Mox20I	TGGCCA	1 cut(s)	1539
Mph1103I	ATGCAT	1 cut(s)	1030
MroXI	GAANNNNTTC	1 cut(s)	1716
MscI	TGGCCA	1 cut(s)	1539
MseI	TTAA	4 cut(s)	285, 339, 1310, 1317
MslI	CAYNNNNRTG	5 cut(s)	872, 955, 1038, 1098, 1581
Msp20I	TGGCCA	1 cut(s)	1539
MspI	CCGG	1 cut(s)	216
MspR9I	CCNGG	8 cut(s)	128, 216, 703, 774, 1048, 1622, 1676, 1733
MvaI	CCWGG	7 cut(s)	128, 703, 774, 1048, 1622, 1676, 1733
MvnI	CGCG	3 cut(s)	135, 144, 269
MwoI	GCNNNNNNNGC	4 cut(s)	137, 141, 143, 146
NciI	CCSGG	1 cut(s)	216
NcoI	CCATGG	1 cut(s)	54
NdeI	CATATG	1 cut(s)	1838
NdeII	GATC	9 cut(s)	211, 234, 823, 1057, 1249, 1384, 1477, 1875, 1900
NlaIV	GGNNCC	7 cut(s)	100, 202, 700, 771, 1045, 1279, 1700
NmeAIII	GCCGAG	2 cut(s)	75, 1860
NmuCI	GTSAC	2 cut(s)	582, 1784
NruI	TCGCGA	1 cut(s)	269
NsiI	ATGCAT	1 cut(s)	1030
NspI	RCATGY	2 cut(s)	871, 1449
NspV	TTCGAA	1 cut(s)	157
PaeI	GCATGC	1 cut(s)	1449
PaeR7I	CTCGAG	1 cut(s)	116
PagI	TCATGA	2 cut(s)	1060, 1126
PasI	CCCWGGG	1 cut(s)	1732
PciSI	GCTCTTC	1 cut(s)	251
PcsI	WCGNNNNNNNCGW	2 cut(s)	102, 114
PdmI	GAANNNNTTC	1 cut(s)	1716
PfeI	GAWTC	8 cut(s)	206, 431, 472, 505, 968, 986, 1215, 1288
PleI	GAGTC	2 cut(s)	610, 752
PpsI	GAGTC	2 cut(s)	610, 752
PpuMI	RGGWCCY	3 cut(s)	457, 1044, 1244
PshBI	ATTAAT	1 cut(s)	285
PsiI	TTATAA	1 cut(s)	1205
Psp124BI	GAGCTC	1 cut(s)	246
Psp5II	RGGWCCY	3 cut(s)	457, 1044, 1244
Psp6I	CCWGG	7 cut(s)	126, 701, 772, 1046, 1620, 1674, 1731
PspGI	CCWGG	7 cut(s)	126, 701, 772, 1046, 1620, 1674, 1731
PspN4I	GGNNCC	7 cut(s)	100, 202, 700, 771, 1045, 1279, 1700
PspPI	GGNCC	6 cut(s)	200, 457, 699, 1044, 1244, 1699
PspPPI	RGGWCCY	3 cut(s)	457, 1044, 1244
PspXI	VCTCGAGB	1 cut(s)	116
PstI	CTGCAG	2 cut(s)	1300, 1793
PstNI	CAGNNNCTG	2 cut(s)	190, 1247
PsuI	RGATCY	3 cut(s)	234, 1384, 1875
RruI	TCGCGA	1 cut(s)	269
RsaI	GTAC	5 cut(s)	391, 520, 771, 1707, 1911
RsaNI	GTAC	5 cut(s)	390, 519, 770, 1706, 1910
RseI	CAYNNNNRTG	5 cut(s)	872, 955, 1038, 1098, 1581
SacI	GAGCTC	1 cut(s)	246
SapI	GCTCTTC	1 cut(s)	251
SaqAI	TTAA	4 cut(s)	285, 339, 1310, 1317
Sau3AI	GATC	9 cut(s)	211, 234, 823, 1057, 1249, 1384, 1477, 1875, 1900
Sau96I	GGNCC	6 cut(s)	200, 457, 699, 1044, 1244, 1699
SchI	GAGTC	2 cut(s)	611, 752
ScrFI	CCNGG	8 cut(s)	128, 216, 703, 774, 1048, 1622, 1676, 1733
SduI	GDGCHC	4 cut(s)	127, 246, 753, 964
SfaNI	GCATC	4 cut(s)	349, 731, 1015, 1037
SfcI	CTRYAG	2 cut(s)	1296, 1789
Sfr274I	CTCGAG	1 cut(s)	116
SfuI	TTCGAA	1 cut(s)	157
SinI	GGWCC	3 cut(s)	457, 1044, 1244
SlaI	CTCGAG	1 cut(s)	116
SmiMI	CAYNNNNRTG	5 cut(s)	872, 955, 1038, 1098, 1581
SmlI	CTYRAG	4 cut(s)	116, 239, 421, 1178
SmoI	CTYRAG	4 cut(s)	116, 239, 421, 1178
SphI	GCATGC	1 cut(s)	1449
Sse9I	AATT	7 cut(s)	253, 282, 370, 683, 885, 1314, 1439
SsiI	CCGC	9 cut(s)	60, 64, 138, 147, 150, 329, 659, 696, 871
SspI	AATATT	1 cut(s)	1767
SspMI	CTAG	2 cut(s)	1119, 1782
SstI	GAGCTC	1 cut(s)	246
StyD4I	CCNGG	8 cut(s)	126, 214, 701, 772, 1046, 1620, 1674, 1731
StyI	CCWWGG	4 cut(s)	54, 460, 1365, 1450
TaaI	ACNGT	1 cut(s)	1717
TaiI	ACGT	2 cut(s)	12, 1658
TaqI	TCGA	5 cut(s)	117, 157, 222, 475, 593
TasI	AATT	7 cut(s)	253, 282, 370, 683, 885, 1314, 1439
TatI	WGTACW	3 cut(s)	389, 1705, 1909
TauI	GCSGC	4 cut(s)	62, 140, 149, 152
TfiI	GAWTC	8 cut(s)	206, 431, 472, 505, 968, 986, 1215, 1288
Tru1I	TTAA	4 cut(s)	285, 339, 1310, 1317
Tru9I	TTAA	4 cut(s)	285, 339, 1310, 1317
TscAI	CASTG	3 cut(s)	195, 603, 1912
TseFI	GTSAC	2 cut(s)	582, 1784
TseI	GCWGC	6 cut(s)	43, 229, 940, 1419, 1422, 1796
Tsp45I	GTSAC	2 cut(s)	582, 1784
TspGWI	ACGGA	2 cut(s)	536, 1270
TspRI	CASTG	3 cut(s)	195, 603, 1912
VpaK11BI	GGWCC	3 cut(s)	457, 1044, 1244
VspI	ATTAAT	1 cut(s)	285
XapI	RAATTY	2 cut(s)	370, 885
XceI	RCATGY	2 cut(s)	871, 1449
XhoI	CTCGAG	1 cut(s)	116
XmiI	GTMKAC	1 cut(s)	1727
XmnI	GAANNNNTTC	1 cut(s)	1716
XspI	CTAG	2 cut(s)	1119, 1782
ZraI	GACGTC	2 cut(s)	10, 1656
Zsp2I	ATGCAT	1 cut(s)	1030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.