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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46550 AT2G46550 AT2G46550 |
| fragaria_vesca | FvH4_7g16870 FvH4_7g31981 |
| malus_domestica | MD01G1083700.v1.1 MD01G1222700.v1.1 MD07G1152400.v1.1 MD07G1293300.v1.1 |
| prunus_persica | Prupe.2G190700_v2.0.a1 Prupe.2G190700_v2.0.a1 Prupe.2G190700_v2.0.a1 Prupe.2G313100_v2.0.a1 Prupe.2G313100_v2.0.a1 Prupe.2G313100_v2.0.a1 |
| pyrus_communis | pycom01g23210 pycom07g15050 |
| rosa_chinensis | RchiOBHm_Chr1g0360101 RchiOBHm_Chr1g0381491 |
| rosa_laevigata | RLG00000026228 RLG00000027833 |
| rosa_multiflora | Rmu_co8234723.1_g000001 Rmu_co8261609.1_g000001 Rmu_co8290353.1_g000001 Rmu_sc0003688.1_g000008 Rmu_sc0006872.1_g000027 Rmu_sc0040454.1_g000001 Rmu_ssc0000368.1_g000040 |
| rosa_roxburghii | Rroxscaffold_4G00278620 |
| rosa_rugosa | Rorug01G0275000 Rorug01G0275100 Rorug01G0428900 |
| rosa_samantha | Rh1AG288900 Rh1BG254400 Rh1BG409400 Rh1CG271900 Rh1CG423900 Rh1DG283500 Rh1DG440700 |
| rosa_wichuraiana | Rw1G025620 Rw1G039470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 112 |
| Acc36I | ACCTGC | 1 cut(s) | 112 |
| AccI | GTMKAC | 1 cut(s) | 1215 |
| AccII | CGCG | 2 cut(s) | 221, 1168 |
| AciI | CCGC | 5 cut(s) | 219, 221, 441, 571, 1210 |
| AclWI | GGATC | 3 cut(s) | 527, 873, 1126 |
| AcuI | CTGAAG | 1 cut(s) | 452 |
| AcvI | CACGTG | 1 cut(s) | 947 |
| AcyI | GRCGYC | 1 cut(s) | 438 |
| AfaI | GTAC | 1 cut(s) | 473 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 257, 542 |
| AflIII | ACRYGT | 1 cut(s) | 944 |
| AgsI | TTSAA | 2 cut(s) | 422, 1058 |
| AjiI | CACGTC | 1 cut(s) | 433 |
| AjnI | CCWGG | 3 cut(s) | 166, 1104, 1290 |
| Alw21I | GWGCWC | 3 cut(s) | 79, 784, 846 |
| Alw26I | GTCTC | 1 cut(s) | 667 |
| Alw44I | GTGCAC | 1 cut(s) | 780 |
| AlwI | GGATC | 3 cut(s) | 527, 873, 1126 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 661 |
| AoxI | GGCC | 2 cut(s) | 134, 594 |
| ApaLI | GTGCAC | 1 cut(s) | 780 |
| ApeKI | GCWGC | 6 cut(s) | 173, 686, 830, 968, 1063, 1066 |
| AspLEI | GCGC | 1 cut(s) | 1170 |
| AspS9I | GGNCC | 2 cut(s) | 134, 1102 |
| AsuC2I | CCSGG | 1 cut(s) | 1127 |
| AsuHPI | GGTGA | 4 cut(s) | 404, 461, 908, 1141 |
| AvaII | GGWCC | 1 cut(s) | 1102 |
| BaeGI | GKGCMC | 1 cut(s) | 784 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 789, 822 |
| BanII | GRGCYC | 1 cut(s) | 79 |
| BauI | CACGAG | 1 cut(s) | 777 |
| BbrPI | CACGTG | 1 cut(s) | 947 |
| BbsI | GAAGAC | 1 cut(s) | 410 |
| Bbv12I | GWGCWC | 3 cut(s) | 79, 784, 846 |
| BbvI | GCAGC | 6 cut(s) | 160, 673, 842, 980, 1050, 1078 |
| BccI | CCATC | 8 cut(s) | 225, 383, 496, 502, 535, 707, 887, 1290 |
| BceAI | ACGGC | 1 cut(s) | 1229 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1195, 1229 |
| BciT130I | CCWGG | 3 cut(s) | 168, 1106, 1292 |
| BcnI | CCSGG | 1 cut(s) | 1127 |
| BcoDI | GTCTC | 1 cut(s) | 667 |
| BfaI | CTAG | 1 cut(s) | 1327 |
| BfmI | CTRYAG | 1 cut(s) | 1064 |
| BfuAI | ACCTGC | 1 cut(s) | 112 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 965 |
| BglII | AGATCT | 1 cut(s) | 874 |
| BisI | GCNGC | 7 cut(s) | 174, 441, 687, 831, 969, 1064, 1067 |
| BlpI | GCTNAGC | 1 cut(s) | 912 |
| BlsI | GCNGC | 7 cut(s) | 175, 442, 688, 832, 970, 1065, 1068 |
| Bme1390I | CCNGG | 4 cut(s) | 168, 1106, 1127, 1292 |
| Bme18I | GGWCC | 1 cut(s) | 1102 |
| BmgBI | CACGTC | 1 cut(s) | 433 |
| BmgT120I | GGNCC | 2 cut(s) | 134, 1102 |
| BmiI | GGNNCC | 2 cut(s) | 1114, 1188 |
| BmrFI | CCNGG | 4 cut(s) | 168, 1106, 1127, 1292 |
| BmrI | ACTGGG | 1 cut(s) | 810 |
| BmsI | GCATC | 2 cut(s) | 55, 118 |
| BmuI | ACTGGG | 1 cut(s) | 810 |
| BpiI | GAAGAC | 1 cut(s) | 410 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 912 |
| BpuEI | CTTGAG | 1 cut(s) | 732 |
| BpuMI | CCSGG | 1 cut(s) | 1127 |
| BsaAI | YACGTR | 1 cut(s) | 947 |
| BsaHI | GRCGYC | 1 cut(s) | 438 |
| BsaJI | CCNNGG | 7 cut(s) | 219, 536, 563, 600, 1139, 1191, 1291 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 257, 542 |
| Bse1I | ACTGG | 3 cut(s) | 597, 805, 1181 |
| BseBI | CCWGG | 3 cut(s) | 168, 1106, 1292 |
| BseDI | CCNNGG | 7 cut(s) | 219, 536, 563, 600, 1139, 1191, 1291 |
| BseGI | GGATG | 9 cut(s) | 133, 163, 344, 513, 546, 676, 1149, 1301, 1317 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 257, 542 |
| BseMII | CTCAG | 3 cut(s) | 668, 926, 1043 |
| BseNI | ACTGG | 3 cut(s) | 597, 805, 1181 |
| BseSI | GKGCMC | 1 cut(s) | 784 |
| BseXI | GCAGC | 6 cut(s) | 160, 673, 842, 980, 1050, 1078 |
| BseYI | CCCAGC | 1 cut(s) | 131 |
| Bsh1236I | CGCG | 2 cut(s) | 221, 1168 |
| BshFI | GGCC | 2 cut(s) | 136, 596 |
| BsiHKAI | GWGCWC | 3 cut(s) | 79, 784, 846 |
| BsiSI | CCGG | 1 cut(s) | 1127 |
| BslFI | GGGAC | 1 cut(s) | 739 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 257, 542 |
| BsmAI | GTCTC | 1 cut(s) | 667 |
| BsmFI | GGGAC | 1 cut(s) | 739 |
| BsnI | GGCC | 2 cut(s) | 136, 596 |
| Bsp1286I | GDGCHC | 3 cut(s) | 79, 784, 846 |
| Bsp143I | GATC | 8 cut(s) | 160, 360, 532, 640, 865, 874, 1131, 1156 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 912 |
| BspACI | CCGC | 5 cut(s) | 219, 221, 441, 571, 1210 |
| BspANI | GGCC | 2 cut(s) | 136, 596 |
| BspCNI | CTCAG | 3 cut(s) | 667, 925, 1042 |
| BspFNI | CGCG | 2 cut(s) | 221, 1168 |
| BspLI | GGNNCC | 2 cut(s) | 1114, 1188 |
| BspMAI | CTGCAG | 1 cut(s) | 1068 |
| BspMI | ACCTGC | 1 cut(s) | 112 |
| BspPI | GGATC | 3 cut(s) | 527, 873, 1126 |
| BspQI | GCTCTTC | 2 cut(s) | 834, 1016 |
| BsrI | ACTGG | 3 cut(s) | 597, 805, 1181 |
| BssECI | CCNNGG | 7 cut(s) | 219, 536, 563, 600, 1139, 1191, 1291 |
| BssMI | GATC | 8 cut(s) | 160, 360, 532, 640, 865, 874, 1131, 1156 |
| BssNI | GRCGYC | 1 cut(s) | 438 |
| BssSI | CACGAG | 1 cut(s) | 777 |
| BssT1I | CCWWGG | 5 cut(s) | 536, 563, 600, 1139, 1191 |
| Bst2BI | CACGAG | 1 cut(s) | 777 |
| Bst2UI | CCWGG | 3 cut(s) | 168, 1106, 1292 |
| Bst4CI | ACNGT | 8 cut(s) | 288, 356, 638, 663, 758, 930, 1120, 1303 |
| Bst6I | CTCTTC | 2 cut(s) | 834, 1016 |
| BstACI | GRCGYC | 1 cut(s) | 438 |
| BstBAI | YACGTR | 1 cut(s) | 947 |
| BstC8I | GCNNGC | 6 cut(s) | 138, 978, 1111, 1208, 1282, 1286 |
| BstDEI | CTNAG | 3 cut(s) | 654, 912, 1029 |
| BstDSI | CCRYGG | 1 cut(s) | 219 |
| BstEII | GGTNACC | 1 cut(s) | 896 |
| BstF5I | GGATG | 9 cut(s) | 133, 163, 344, 513, 546, 676, 1149, 1301, 1317 |
| BstFNI | CGCG | 2 cut(s) | 221, 1168 |
| BstHHI | GCGC | 1 cut(s) | 1170 |
| BstKTI | GATC | 8 cut(s) | 163, 363, 535, 643, 868, 877, 1134, 1159 |
| BstMAI | GTCTC | 1 cut(s) | 667 |
| BstMBI | GATC | 8 cut(s) | 160, 360, 532, 640, 865, 874, 1131, 1156 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 74, 137, 302, 692, 956, 965, 977 |
| BstNI | CCWGG | 3 cut(s) | 168, 1106, 1292 |
| BstNSI | RCATGY | 1 cut(s) | 460 |
| BstPI | GGTNACC | 1 cut(s) | 896 |
| BstSCI | CCNGG | 4 cut(s) | 166, 1104, 1125, 1290 |
| BstSFI | CTRYAG | 1 cut(s) | 1064 |
| BstSLI | GKGCMC | 1 cut(s) | 784 |
| BstUI | CGCG | 2 cut(s) | 221, 1168 |
| BstV1I | GCAGC | 6 cut(s) | 160, 673, 842, 980, 1050, 1078 |
| BstV2I | GAAGAC | 1 cut(s) | 410 |
| BstX2I | RGATCY | 3 cut(s) | 532, 865, 874 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 124, 537 |
| BstYI | RGATCY | 3 cut(s) | 532, 865, 874 |
| BsuRI | GGCC | 2 cut(s) | 136, 596 |
| BtgI | CCRYGG | 1 cut(s) | 219 |
| BtrI | CACGTC | 1 cut(s) | 433 |
| BtsCI | GGATG | 9 cut(s) | 133, 163, 344, 513, 546, 676, 1149, 1301, 1317 |
| BtsI | GCAGTG | 1 cut(s) | 1055 |
| BtsIMutI | CAGTG | 4 cut(s) | 361, 926, 1055, 1116 |
| BveI | ACCTGC | 1 cut(s) | 112 |
| Cac8I | GCNNGC | 6 cut(s) | 138, 978, 1111, 1208, 1282, 1286 |
| CaiI | CAGNNNCTG | 1 cut(s) | 661 |
| CfoI | GCGC | 1 cut(s) | 1170 |
| Cfr13I | GGNCC | 2 cut(s) | 134, 1102 |
| Cfr42I | CCGCGG | 1 cut(s) | 222 |
| CseI | GACGC | 1 cut(s) | 446 |
| Csp6I | GTAC | 1 cut(s) | 472 |
| CviAII | CATG | 7 cut(s) | 181, 257, 310, 457, 481, 692, 710 |
| CviQI | GTAC | 1 cut(s) | 472 |
| DdeI | CTNAG | 3 cut(s) | 654, 912, 1029 |
| DpnI | GATC | 8 cut(s) | 162, 362, 534, 642, 867, 876, 1133, 1158 |
| DpnII | GATC | 8 cut(s) | 160, 360, 532, 640, 865, 874, 1131, 1156 |
| DraI | TTTAAA | 1 cut(s) | 1018 |
| Eam1104I | CTCTTC | 2 cut(s) | 834, 1016 |
| EarI | CTCTTC | 2 cut(s) | 834, 1016 |
| EciI | GGCGGA | 1 cut(s) | 586 |
| Ecl136II | GAGCTC | 1 cut(s) | 77 |
| Eco130I | CCWWGG | 5 cut(s) | 536, 563, 600, 1139, 1191 |
| Eco24I | GRGCYC | 1 cut(s) | 79 |
| Eco47I | GGWCC | 1 cut(s) | 1102 |
| Eco53kI | GAGCTC | 1 cut(s) | 77 |
| Eco57I | CTGAAG | 1 cut(s) | 452 |
| Eco72I | CACGTG | 1 cut(s) | 947 |
| Eco91I | GGTNACC | 1 cut(s) | 896 |
| EcoICRI | GAGCTC | 1 cut(s) | 77 |
| EcoO65I | GGTNACC | 1 cut(s) | 896 |
| EcoRII | CCWGG | 3 cut(s) | 166, 1104, 1290 |
| EcoT14I | CCWWGG | 5 cut(s) | 536, 563, 600, 1139, 1191 |
| EcoT22I | ATGCAT | 1 cut(s) | 298 |
| EcoT38I | GRGCYC | 1 cut(s) | 79 |
| ErhI | CCWWGG | 5 cut(s) | 536, 563, 600, 1139, 1191 |
| FaeI | CATG | 7 cut(s) | 184, 260, 313, 460, 484, 695, 713 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 998, 1030 |
| FaqI | GGGAC | 1 cut(s) | 739 |
| FatI | CATG | 7 cut(s) | 180, 256, 309, 456, 480, 691, 709 |
| FauI | CCCGC | 2 cut(s) | 226, 1203 |
| FauNDI | CATATG | 2 cut(s) | 445, 682 |
| FblI | GTMKAC | 1 cut(s) | 1215 |
| Fnu4HI | GCNGC | 7 cut(s) | 174, 441, 687, 831, 969, 1064, 1067 |
| FokI | GGATG | 9 cut(s) | 140, 150, 331, 520, 553, 663, 1156, 1308, 1324 |
| FriOI | GRGCYC | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 7 cut(s) | 174, 441, 687, 831, 969, 1064, 1067 |
| FspBI | CTAG | 1 cut(s) | 1327 |
| GlaI | GCGC | 1 cut(s) | 1169 |
| GluI | GCNGC | 7 cut(s) | 174, 441, 687, 831, 969, 1064, 1067 |
| GsaI | CCCAGC | 1 cut(s) | 135 |
| HaeIII | GGCC | 2 cut(s) | 136, 596 |
| HapII | CCGG | 1 cut(s) | 1127 |
| HgaI | GACGC | 1 cut(s) | 446 |
| HhaI | GCGC | 1 cut(s) | 1170 |
| Hin1I | GRCGYC | 1 cut(s) | 438 |
| Hin1II | CATG | 7 cut(s) | 184, 260, 313, 460, 484, 695, 713 |
| Hin6I | GCGC | 1 cut(s) | 1168 |
| HinP1I | GCGC | 1 cut(s) | 1168 |
| HincII | GTYRAC | 1 cut(s) | 1216 |
| HindII | GTYRAC | 1 cut(s) | 1216 |
| HindIII | AAGCTT | 2 cut(s) | 978, 1023 |
| HinfI | GANTC | 1 cut(s) | 196 |
| HpaII | CCGG | 1 cut(s) | 1127 |
| HphI | GGTGA | 4 cut(s) | 404, 461, 908, 1141 |
| Hpy166II | GTNNAC | 4 cut(s) | 384, 436, 782, 1216 |
| Hpy188I | TCNGA | 5 cut(s) | 657, 706, 796, 850, 870 |
| Hpy188III | TCNNGA | 1 cut(s) | 1087 |
| Hpy8I | GTNNAC | 4 cut(s) | 384, 436, 782, 1216 |
| HpyAV | CCTTC | 6 cut(s) | 187, 736, 958, 985, 1145, 1329 |
| HpyCH4III | ACNGT | 8 cut(s) | 288, 356, 638, 663, 758, 930, 1120, 1303 |
| HpyCH4IV | ACGT | 2 cut(s) | 432, 946 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 74, 137, 302, 692, 956, 965, 977 |
| HpyF3I | CTNAG | 3 cut(s) | 654, 912, 1029 |
| HpySE526I | ACGT | 2 cut(s) | 432, 946 |
| Hsp92I | GRCGYC | 1 cut(s) | 438 |
| Hsp92II | CATG | 7 cut(s) | 184, 260, 313, 460, 484, 695, 713 |
| HspAI | GCGC | 1 cut(s) | 1168 |
| KspI | CCGCGG | 1 cut(s) | 222 |
| Kzo9I | GATC | 8 cut(s) | 160, 360, 532, 640, 865, 874, 1131, 1156 |
| LguI | GCTCTTC | 2 cut(s) | 834, 1016 |
| LmnI | GCTCC | 5 cut(s) | 8, 82, 994, 1118, 1293 |
| Lsp1109I | GCAGC | 6 cut(s) | 160, 673, 842, 980, 1050, 1078 |
| LweI | GCATC | 2 cut(s) | 55, 118 |
| MaeI | CTAG | 1 cut(s) | 1327 |
| MaeII | ACGT | 2 cut(s) | 432, 946 |
| MaeIII | GTNAC | 4 cut(s) | 615, 805, 896, 1314 |
| MalI | GATC | 8 cut(s) | 162, 362, 534, 642, 867, 876, 1133, 1158 |
| MboI | GATC | 8 cut(s) | 160, 360, 532, 640, 865, 874, 1131, 1156 |
| MboII | GAAGA | 6 cut(s) | 74, 99, 415, 635, 851, 1003 |
| MfeI | CAATTG | 1 cut(s) | 1058 |
| MflI | RGATCY | 3 cut(s) | 532, 865, 874 |
| MhlI | GDGCHC | 3 cut(s) | 79, 784, 846 |
| MluCI | AATT | 2 cut(s) | 83, 1058 |
| MnlI | CCTC | 8 cut(s) | 112, 145, 477, 539, 546, 607, 663, 855 |
| Mph1103I | ATGCAT | 1 cut(s) | 298 |
| MseI | TTAA | 6 cut(s) | 275, 290, 1005, 1017, 1092, 1233 |
| MslI | CAYNNNNRTG | 3 cut(s) | 168, 681, 1224 |
| MspA1I | CMGCKG | 3 cut(s) | 221, 833, 1069 |
| MspI | CCGG | 1 cut(s) | 1127 |
| MspR9I | CCNGG | 4 cut(s) | 168, 1106, 1127, 1292 |
| MunI | CAATTG | 1 cut(s) | 1058 |
| MvaI | CCWGG | 3 cut(s) | 168, 1106, 1292 |
| MvnI | CGCG | 2 cut(s) | 221, 1168 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 74, 137, 302, 692, 956, 965, 977 |
| NciI | CCSGG | 1 cut(s) | 1127 |
| NdeI | CATATG | 2 cut(s) | 445, 682 |
| NdeII | GATC | 8 cut(s) | 160, 360, 532, 640, 865, 874, 1131, 1156 |
| NlaIII | CATG | 7 cut(s) | 184, 260, 313, 460, 484, 695, 713 |
| NlaIV | GGNNCC | 2 cut(s) | 1114, 1188 |
| NmeAIII | GCCGAG | 2 cut(s) | 985, 1012 |
| NmuCI | GTSAC | 2 cut(s) | 615, 896 |
| NsiI | ATGCAT | 1 cut(s) | 298 |
| NspI | RCATGY | 1 cut(s) | 460 |
| PaqCI | CACCTGC | 1 cut(s) | 112 |
| PciSI | GCTCTTC | 2 cut(s) | 834, 1016 |
| PfeI | GAWTC | 1 cut(s) | 196 |
| PkrI | GCNGC | 7 cut(s) | 175, 442, 688, 832, 970, 1065, 1068 |
| PmaCI | CACGTG | 1 cut(s) | 947 |
| PmlI | CACGTG | 1 cut(s) | 947 |
| Ppu21I | YACGTR | 1 cut(s) | 947 |
| Psp124BI | GAGCTC | 1 cut(s) | 79 |
| Psp6I | CCWGG | 3 cut(s) | 166, 1104, 1290 |
| PspCI | CACGTG | 1 cut(s) | 947 |
| PspEI | GGTNACC | 1 cut(s) | 896 |
| PspFI | CCCAGC | 1 cut(s) | 131 |
| PspGI | CCWGG | 3 cut(s) | 166, 1104, 1290 |
| PspN4I | GGNNCC | 2 cut(s) | 1114, 1188 |
| PspPI | GGNCC | 2 cut(s) | 134, 1102 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 184, 216 |
| PstI | CTGCAG | 1 cut(s) | 1068 |
| PstNI | CAGNNNCTG | 1 cut(s) | 661 |
| PsuI | RGATCY | 3 cut(s) | 532, 865, 874 |
| PvuII | CAGCTG | 2 cut(s) | 833, 1069 |
| RsaI | GTAC | 1 cut(s) | 473 |
| RsaNI | GTAC | 1 cut(s) | 472 |
| RseI | CAYNNNNRTG | 3 cut(s) | 168, 681, 1224 |
| SacI | GAGCTC | 1 cut(s) | 79 |
| SacII | CCGCGG | 1 cut(s) | 222 |
| SalI | GTCGAC | 1 cut(s) | 1214 |
| SapI | GCTCTTC | 2 cut(s) | 834, 1016 |
| SaqAI | TTAA | 6 cut(s) | 275, 290, 1005, 1017, 1092, 1233 |
| SatI | GCNGC | 7 cut(s) | 174, 441, 687, 831, 969, 1064, 1067 |
| Sau3AI | GATC | 8 cut(s) | 160, 360, 532, 640, 865, 874, 1131, 1156 |
| Sau96I | GGNCC | 2 cut(s) | 134, 1102 |
| ScrFI | CCNGG | 4 cut(s) | 168, 1106, 1127, 1292 |
| SduI | GDGCHC | 3 cut(s) | 79, 784, 846 |
| SfaNI | GCATC | 2 cut(s) | 55, 118 |
| SfcI | CTRYAG | 1 cut(s) | 1064 |
| Sfr303I | CCGCGG | 1 cut(s) | 222 |
| SgrBI | CCGCGG | 1 cut(s) | 222 |
| SinI | GGWCC | 1 cut(s) | 1102 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 168, 681, 1224 |
| SmlI | CTYRAG | 1 cut(s) | 747 |
| SmoI | CTYRAG | 1 cut(s) | 747 |
| Sse9I | AATT | 2 cut(s) | 83, 1058 |
| SsiI | CCGC | 5 cut(s) | 219, 221, 441, 571, 1210 |
| SspMI | CTAG | 1 cut(s) | 1327 |
| SstI | GAGCTC | 1 cut(s) | 79 |
| StyD4I | CCNGG | 4 cut(s) | 166, 1104, 1125, 1290 |
| StyI | CCWWGG | 5 cut(s) | 536, 563, 600, 1139, 1191 |
| TaaI | ACNGT | 8 cut(s) | 288, 356, 638, 663, 758, 930, 1120, 1303 |
| TaiI | ACGT | 2 cut(s) | 435, 949 |
| TaqI | TCGA | 5 cut(s) | 110, 363, 921, 1159, 1215 |
| TaqII | GACCGA | 1 cut(s) | 1256 |
| TasI | AATT | 2 cut(s) | 83, 1058 |
| TatI | WGTACW | 1 cut(s) | 471 |
| TauI | GCSGC | 1 cut(s) | 443 |
| TfiI | GAWTC | 1 cut(s) | 196 |
| Tru1I | TTAA | 6 cut(s) | 275, 290, 1005, 1017, 1092, 1233 |
| Tru9I | TTAA | 6 cut(s) | 275, 290, 1005, 1017, 1092, 1233 |
| TscAI | CASTG | 4 cut(s) | 361, 933, 1055, 1123 |
| TseFI | GTSAC | 2 cut(s) | 615, 896 |
| TseI | GCWGC | 6 cut(s) | 173, 686, 830, 968, 1063, 1066 |
| Tsp45I | GTSAC | 2 cut(s) | 615, 896 |
| TspDTI | ATGAA | 7 cut(s) | 169, 192, 429, 510, 540, 603, 852 |
| TspRI | CASTG | 4 cut(s) | 361, 933, 1055, 1123 |
| VneI | GTGCAC | 1 cut(s) | 780 |
| VpaK11BI | GGWCC | 1 cut(s) | 1102 |
| XceI | RCATGY | 1 cut(s) | 460 |
| XmiI | GTMKAC | 1 cut(s) | 1215 |
| XspI | CTAG | 1 cut(s) | 1327 |
| Zsp2I | ATGCAT | 1 cut(s) | 298 |