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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46550 AT2G46550 AT2G46550 |
| fragaria_vesca | FvH4_7g16870 FvH4_7g31981 |
| malus_domestica | MD01G1083700.v1.1 MD01G1222700.v1.1 MD07G1152400.v1.1 MD07G1293300.v1.1 |
| prunus_persica | Prupe.2G190700_v2.0.a1 Prupe.2G190700_v2.0.a1 Prupe.2G190700_v2.0.a1 Prupe.2G313100_v2.0.a1 Prupe.2G313100_v2.0.a1 Prupe.2G313100_v2.0.a1 |
| pyrus_communis | pycom01g23210 pycom07g15050 |
| rosa_chinensis | RchiOBHm_Chr1g0360101 RchiOBHm_Chr1g0381491 |
| rosa_laevigata | RLG00000026228 RLG00000027833 |
| rosa_multiflora | Rmu_co8234723.1_g000001 Rmu_co8261609.1_g000001 Rmu_co8290353.1_g000001 Rmu_sc0003688.1_g000008 Rmu_sc0006872.1_g000027 Rmu_sc0040454.1_g000001 Rmu_ssc0000368.1_g000040 |
| rosa_roxburghii | Rroxscaffold_4G00278620 |
| rosa_rugosa | Rorug01G0275000 Rorug01G0275100 Rorug01G0428900 |
| rosa_samantha | Rh1AG288900 Rh1BG254400 Rh1BG409400 Rh1CG271900 Rh1CG423900 Rh1DG283500 Rh1DG440700 |
| rosa_wichuraiana | Rw1G025620 Rw1G039470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 639 |
| Acc36I | ACCTGC | 1 cut(s) | 112 |
| Acc65I | GGTACC | 1 cut(s) | 261 |
| AccB1I | GGYRCC | 1 cut(s) | 261 |
| AccI | GTMKAC | 1 cut(s) | 214 |
| AccII | CGCG | 1 cut(s) | 1195 |
| AciI | CCGC | 6 cut(s) | 364, 601, 1143, 1193, 1195, 1237 |
| AclWI | GGATC | 1 cut(s) | 818 |
| AcsI | RAATTY | 1 cut(s) | 548 |
| AcuI | CTGAAG | 2 cut(s) | 882, 1027 |
| AcvI | CACGTG | 1 cut(s) | 974 |
| AfaI | GTAC | 3 cut(s) | 263, 385, 473 |
| AfeI | AGCGCT | 1 cut(s) | 954 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 173, 257, 572, 1181 |
| AflIII | ACRYGT | 1 cut(s) | 971 |
| AgsI | TTSAA | 3 cut(s) | 59, 111, 1180 |
| AjnI | CCWGG | 4 cut(s) | 826, 1135, 1247, 1317 |
| Alw21I | GWGCWC | 2 cut(s) | 79, 1026 |
| Alw26I | GTCTC | 2 cut(s) | 697, 896 |
| AlwI | GGATC | 1 cut(s) | 818 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 137 |
| Ama87I | CYCGRG | 1 cut(s) | 542 |
| Aor51HI | AGCGCT | 1 cut(s) | 954 |
| AoxI | GGCC | 6 cut(s) | 21, 134, 155, 303, 624, 771 |
| ApoI | RAATTY | 1 cut(s) | 548 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 769, 801 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 465 |
| Asp718I | GGTACC | 1 cut(s) | 261 |
| AspLEI | GCGC | 2 cut(s) | 640, 955 |
| AspS9I | GGNCC | 7 cut(s) | 21, 134, 155, 361, 772, 1159, 1214 |
| AvaI | CYCGRG | 1 cut(s) | 542 |
| AvaII | GGWCC | 3 cut(s) | 361, 1159, 1214 |
| BaeGI | GKGCMC | 1 cut(s) | 873 |
| BanI | GGYRCC | 1 cut(s) | 261 |
| BanII | GRGCYC | 1 cut(s) | 79 |
| BbrPI | CACGTG | 1 cut(s) | 974 |
| Bbv12I | GWGCWC | 2 cut(s) | 79, 1026 |
| BccI | CCATC | 5 cut(s) | 225, 389, 758, 985, 1317 |
| BceAI | ACGGC | 1 cut(s) | 8 |
| BciT130I | CCWGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| BciVI | GTATCC | 1 cut(s) | 505 |
| BcoDI | GTCTC | 2 cut(s) | 697, 896 |
| BfaI | CTAG | 2 cut(s) | 252, 354 |
| BfmI | CTRYAG | 2 cut(s) | 144, 1091 |
| BfoI | RGCGCY | 1 cut(s) | 956 |
| BfuAI | ACCTGC | 1 cut(s) | 112 |
| BfuI | GTATCC | 1 cut(s) | 505 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 992 |
| BlpI | GCTNAGC | 1 cut(s) | 939 |
| Bme1390I | CCNGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| Bme18I | GGWCC | 3 cut(s) | 361, 1159, 1214 |
| BmeT110I | CYCGRG | 1 cut(s) | 542 |
| BmgT120I | GGNCC | 7 cut(s) | 21, 134, 155, 361, 772, 1159, 1214 |
| BmiI | GGNNCC | 5 cut(s) | 263, 1082, 1141, 1215, 1216 |
| BmrFI | CCNGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| BmrI | ACTGGG | 1 cut(s) | 1148 |
| BmsI | GCATC | 6 cut(s) | 55, 118, 214, 379, 1119, 1161 |
| BmuI | ACTGGG | 1 cut(s) | 1148 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 939 |
| BsaAI | YACGTR | 1 cut(s) | 974 |
| BsaJI | CCNNGG | 9 cut(s) | 543, 566, 593, 630, 1166, 1193, 1218, 1247, 1318 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 173, 257, 572, 1181 |
| Bse1I | ACTGG | 6 cut(s) | 97, 210, 784, 801, 1154, 1208 |
| BseBI | CCWGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| BseDI | CCNNGG | 9 cut(s) | 543, 566, 593, 630, 1166, 1193, 1218, 1247, 1318 |
| BseGI | GGATG | 9 cut(s) | 163, 484, 706, 731, 898, 1110, 1176, 1328, 1344 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 173, 257, 572, 1181 |
| BseMII | CTCAG | 5 cut(s) | 311, 698, 909, 953, 1005 |
| BseNI | ACTGG | 6 cut(s) | 97, 210, 784, 801, 1154, 1208 |
| BseSI | GKGCMC | 1 cut(s) | 873 |
| BseYI | CCCAGC | 1 cut(s) | 326 |
| Bsh1236I | CGCG | 1 cut(s) | 1195 |
| BshFI | GGCC | 6 cut(s) | 23, 136, 157, 305, 626, 773 |
| BshNI | GGYRCC | 1 cut(s) | 261 |
| BsiHKAI | GWGCWC | 2 cut(s) | 79, 1026 |
| BsiHKCI | CYCGRG | 1 cut(s) | 542 |
| BslFI | GGGAC | 3 cut(s) | 766, 1136, 1200 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 173, 257, 572, 1181 |
| BsmAI | GTCTC | 2 cut(s) | 697, 896 |
| BsmFI | GGGAC | 3 cut(s) | 766, 1136, 1200 |
| BsnI | GGCC | 6 cut(s) | 23, 136, 157, 305, 626, 773 |
| BsoBI | CYCGRG | 1 cut(s) | 542 |
| Bsp1286I | GDGCHC | 3 cut(s) | 79, 873, 1026 |
| Bsp143I | GATC | 3 cut(s) | 160, 670, 823 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 939 |
| Bsp19I | CCATGG | 2 cut(s) | 593, 1166 |
| BspACI | CCGC | 6 cut(s) | 364, 601, 1143, 1193, 1195, 1237 |
| BspANI | GGCC | 6 cut(s) | 23, 136, 157, 305, 626, 773 |
| BspCNI | CTCAG | 5 cut(s) | 312, 697, 910, 952, 1006 |
| BspFNI | CGCG | 1 cut(s) | 1195 |
| BspLI | GGNNCC | 5 cut(s) | 263, 1082, 1141, 1215, 1216 |
| BspMAI | CTGCAG | 2 cut(s) | 148, 1095 |
| BspMI | ACCTGC | 1 cut(s) | 112 |
| BspPI | GGATC | 1 cut(s) | 818 |
| BspQI | GCTCTTC | 1 cut(s) | 1043 |
| BspT107I | GGYRCC | 1 cut(s) | 261 |
| BsrI | ACTGG | 6 cut(s) | 97, 210, 784, 801, 1154, 1208 |
| BssECI | CCNNGG | 9 cut(s) | 543, 566, 593, 630, 1166, 1193, 1218, 1247, 1318 |
| BssMI | GATC | 3 cut(s) | 160, 670, 823 |
| BssT1I | CCWWGG | 5 cut(s) | 566, 593, 630, 1166, 1218 |
| Bst2UI | CCWGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| Bst4CI | ACNGT | 4 cut(s) | 288, 668, 813, 1330 |
| Bst6I | CTCTTC | 1 cut(s) | 1043 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 137 |
| BstBAI | YACGTR | 1 cut(s) | 974 |
| BstC8I | GCNNGC | 7 cut(s) | 91, 138, 1005, 1235, 1239, 1309, 1313 |
| BstDEI | CTNAG | 6 cut(s) | 117, 320, 684, 918, 939, 1014 |
| BstDSI | CCRYGG | 3 cut(s) | 593, 1166, 1193 |
| BstF5I | GGATG | 9 cut(s) | 163, 484, 706, 731, 898, 1110, 1176, 1328, 1344 |
| BstFNI | CGCG | 1 cut(s) | 1195 |
| BstH2I | RGCGCY | 1 cut(s) | 956 |
| BstHHI | GCGC | 2 cut(s) | 640, 955 |
| BstKTI | GATC | 3 cut(s) | 163, 673, 826 |
| BstMAI | GTCTC | 2 cut(s) | 697, 896 |
| BstMBI | GATC | 3 cut(s) | 160, 670, 823 |
| BstNI | CCWGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| BstSCI | CCNGG | 4 cut(s) | 826, 1135, 1247, 1317 |
| BstSFI | CTRYAG | 2 cut(s) | 144, 1091 |
| BstSLI | GKGCMC | 1 cut(s) | 873 |
| BstUI | CGCG | 1 cut(s) | 1195 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 782 |
| BsuI | GTATCC | 1 cut(s) | 505 |
| BsuRI | GGCC | 6 cut(s) | 23, 136, 157, 305, 626, 773 |
| BtgI | CCRYGG | 3 cut(s) | 593, 1166, 1193 |
| BtsCI | GGATG | 9 cut(s) | 163, 484, 706, 731, 898, 1110, 1176, 1328, 1344 |
| BtsI | GCAGTG | 1 cut(s) | 1082 |
| BtsIMutI | CAGTG | 3 cut(s) | 317, 1082, 1161 |
| BveI | ACCTGC | 1 cut(s) | 112 |
| Cac8I | GCNNGC | 7 cut(s) | 91, 138, 1005, 1235, 1239, 1309, 1313 |
| CaiI | CAGNNNCTG | 1 cut(s) | 137 |
| CfoI | GCGC | 2 cut(s) | 640, 955 |
| Cfr13I | GGNCC | 7 cut(s) | 21, 134, 155, 361, 772, 1159, 1214 |
| Cfr42I | CCGCGG | 1 cut(s) | 1196 |
| Csp6I | GTAC | 3 cut(s) | 262, 384, 472 |
| CviAII | CATG | 7 cut(s) | 310, 454, 594, 656, 806, 839, 1167 |
| CviQI | GTAC | 3 cut(s) | 262, 384, 472 |
| DdeI | CTNAG | 6 cut(s) | 117, 320, 684, 918, 939, 1014 |
| DpnI | GATC | 3 cut(s) | 162, 672, 825 |
| DpnII | GATC | 3 cut(s) | 160, 670, 823 |
| Eam1104I | CTCTTC | 1 cut(s) | 1043 |
| EarI | CTCTTC | 1 cut(s) | 1043 |
| EciI | GGCGGA | 2 cut(s) | 353, 616 |
| Ecl136II | GAGCTC | 1 cut(s) | 77 |
| Eco130I | CCWWGG | 5 cut(s) | 566, 593, 630, 1166, 1218 |
| Eco24I | GRGCYC | 1 cut(s) | 79 |
| Eco47I | GGWCC | 3 cut(s) | 361, 1159, 1214 |
| Eco47III | AGCGCT | 1 cut(s) | 954 |
| Eco53kI | GAGCTC | 1 cut(s) | 77 |
| Eco57I | CTGAAG | 2 cut(s) | 882, 1027 |
| Eco72I | CACGTG | 1 cut(s) | 974 |
| Eco88I | CYCGRG | 1 cut(s) | 542 |
| EcoICRI | GAGCTC | 1 cut(s) | 77 |
| EcoO109I | RGGNCCY | 2 cut(s) | 134, 1214 |
| EcoRII | CCWGG | 4 cut(s) | 826, 1135, 1247, 1317 |
| EcoT14I | CCWWGG | 5 cut(s) | 566, 593, 630, 1166, 1218 |
| EcoT38I | GRGCYC | 1 cut(s) | 79 |
| ErhI | CCWWGG | 5 cut(s) | 566, 593, 630, 1166, 1218 |
| FaeI | CATG | 7 cut(s) | 313, 457, 597, 659, 809, 842, 1170 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 927, 959, 1025, 1057 |
| FaqI | GGGAC | 3 cut(s) | 766, 1136, 1200 |
| FatI | CATG | 7 cut(s) | 309, 453, 593, 655, 805, 838, 1166 |
| FauI | CCCGC | 1 cut(s) | 1230 |
| FauNDI | CATATG | 1 cut(s) | 280 |
| FblI | GTMKAC | 1 cut(s) | 214 |
| FokI | GGATG | 9 cut(s) | 150, 491, 693, 738, 905, 1097, 1183, 1335, 1351 |
| FriOI | GRGCYC | 1 cut(s) | 79 |
| FspBI | CTAG | 2 cut(s) | 252, 354 |
| FspI | TGCGCA | 1 cut(s) | 639 |
| GlaI | GCGC | 2 cut(s) | 639, 954 |
| GsaI | CCCAGC | 1 cut(s) | 330 |
| HaeII | RGCGCY | 1 cut(s) | 956 |
| HaeIII | GGCC | 6 cut(s) | 23, 136, 157, 305, 626, 773 |
| HhaI | GCGC | 2 cut(s) | 640, 955 |
| Hin1II | CATG | 7 cut(s) | 313, 457, 597, 659, 809, 842, 1170 |
| Hin6I | GCGC | 2 cut(s) | 638, 953 |
| HinP1I | GCGC | 2 cut(s) | 638, 953 |
| HindIII | AAGCTT | 1 cut(s) | 1005 |
| HinfI | GANTC | 2 cut(s) | 196, 1290 |
| Hpy166II | GTNNAC | 2 cut(s) | 215, 433 |
| Hpy188I | TCNGA | 7 cut(s) | 687, 733, 793, 823, 877, 919, 1046 |
| Hpy188III | TCNNGA | 2 cut(s) | 59, 1114 |
| Hpy8I | GTNNAC | 2 cut(s) | 215, 433 |
| HpyAV | CCTTC | 7 cut(s) | 146, 210, 451, 763, 860, 1012, 1172 |
| HpyCH4III | ACNGT | 4 cut(s) | 288, 668, 813, 1330 |
| HpyCH4IV | ACGT | 1 cut(s) | 973 |
| HpyF3I | CTNAG | 6 cut(s) | 117, 320, 684, 918, 939, 1014 |
| HpySE526I | ACGT | 1 cut(s) | 973 |
| Hsp92II | CATG | 7 cut(s) | 313, 457, 597, 659, 809, 842, 1170 |
| HspAI | GCGC | 2 cut(s) | 638, 953 |
| KflI | GGGWCCC | 1 cut(s) | 1214 |
| KpnI | GGTACC | 1 cut(s) | 265 |
| KspI | CCGCGG | 1 cut(s) | 1196 |
| Kzo9I | GATC | 3 cut(s) | 160, 670, 823 |
| LguI | GCTCTTC | 1 cut(s) | 1043 |
| LmnI | GCTCC | 4 cut(s) | 82, 1021, 1145, 1320 |
| LweI | GCATC | 6 cut(s) | 55, 118, 214, 379, 1119, 1161 |
| MaeI | CTAG | 2 cut(s) | 252, 354 |
| MaeII | ACGT | 1 cut(s) | 973 |
| MaeIII | GTNAC | 5 cut(s) | 398, 557, 645, 895, 1341 |
| MalI | GATC | 3 cut(s) | 162, 672, 825 |
| MboI | GATC | 3 cut(s) | 160, 670, 823 |
| MboII | GAAGA | 6 cut(s) | 74, 99, 665, 875, 1030, 1033 |
| MfeI | CAATTG | 1 cut(s) | 1085 |
| MhlI | GDGCHC | 3 cut(s) | 79, 873, 1026 |
| MluCI | AATT | 5 cut(s) | 83, 498, 548, 620, 1085 |
| MmeI | TCCRAC | 1 cut(s) | 279 |
| MroXI | GAANNNNTTC | 1 cut(s) | 465 |
| MseI | TTAA | 5 cut(s) | 189, 290, 651, 1032, 1119 |
| MslI | CAYNNNNRTG | 1 cut(s) | 711 |
| MspA1I | CMGCKG | 4 cut(s) | 860, 1096, 1145, 1195 |
| MspR9I | CCNGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| MunI | CAATTG | 1 cut(s) | 1085 |
| MvaI | CCWGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| MvnI | CGCG | 1 cut(s) | 1195 |
| NcoI | CCATGG | 2 cut(s) | 593, 1166 |
| NdeI | CATATG | 1 cut(s) | 280 |
| NdeII | GATC | 3 cut(s) | 160, 670, 823 |
| NlaIII | CATG | 7 cut(s) | 313, 457, 597, 659, 809, 842, 1170 |
| NlaIV | GGNNCC | 5 cut(s) | 263, 1082, 1141, 1215, 1216 |
| NmeAIII | GCCGAG | 1 cut(s) | 1012 |
| NmuCI | GTSAC | 4 cut(s) | 398, 557, 645, 895 |
| NsbI | TGCGCA | 1 cut(s) | 639 |
| PciSI | GCTCTTC | 1 cut(s) | 1043 |
| PdmI | GAANNNNTTC | 1 cut(s) | 465 |
| PfeI | GAWTC | 2 cut(s) | 196, 1290 |
| PfoI | TCCNGGA | 1 cut(s) | 826 |
| PmaCI | CACGTG | 1 cut(s) | 974 |
| PmlI | CACGTG | 1 cut(s) | 974 |
| Ppu21I | YACGTR | 1 cut(s) | 974 |
| PpuMI | RGGWCCY | 1 cut(s) | 1214 |
| Psp124BI | GAGCTC | 1 cut(s) | 79 |
| Psp5II | RGGWCCY | 1 cut(s) | 1214 |
| Psp6I | CCWGG | 4 cut(s) | 826, 1135, 1247, 1317 |
| PspCI | CACGTG | 1 cut(s) | 974 |
| PspFI | CCCAGC | 1 cut(s) | 326 |
| PspGI | CCWGG | 4 cut(s) | 826, 1135, 1247, 1317 |
| PspN4I | GGNNCC | 5 cut(s) | 263, 1082, 1141, 1215, 1216 |
| PspPI | GGNCC | 7 cut(s) | 21, 134, 155, 361, 772, 1159, 1214 |
| PspPPI | RGGWCCY | 1 cut(s) | 1214 |
| PstI | CTGCAG | 2 cut(s) | 148, 1095 |
| PstNI | CAGNNNCTG | 1 cut(s) | 137 |
| PvuII | CAGCTG | 2 cut(s) | 860, 1096 |
| RsaI | GTAC | 3 cut(s) | 263, 385, 473 |
| RsaNI | GTAC | 3 cut(s) | 262, 384, 472 |
| RseI | CAYNNNNRTG | 1 cut(s) | 711 |
| SacI | GAGCTC | 1 cut(s) | 79 |
| SacII | CCGCGG | 1 cut(s) | 1196 |
| SapI | GCTCTTC | 1 cut(s) | 1043 |
| SaqAI | TTAA | 5 cut(s) | 189, 290, 651, 1032, 1119 |
| Sau3AI | GATC | 3 cut(s) | 160, 670, 823 |
| Sau96I | GGNCC | 7 cut(s) | 21, 134, 155, 361, 772, 1159, 1214 |
| ScrFI | CCNGG | 4 cut(s) | 828, 1137, 1249, 1319 |
| SduI | GDGCHC | 3 cut(s) | 79, 873, 1026 |
| SfaNI | GCATC | 6 cut(s) | 55, 118, 214, 379, 1119, 1161 |
| SfcI | CTRYAG | 2 cut(s) | 144, 1091 |
| Sfr303I | CCGCGG | 1 cut(s) | 1196 |
| SgrBI | CCGCGG | 1 cut(s) | 1196 |
| SinI | GGWCC | 3 cut(s) | 361, 1159, 1214 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 711 |
| Sse9I | AATT | 5 cut(s) | 83, 498, 548, 620, 1085 |
| SsiI | CCGC | 6 cut(s) | 364, 601, 1143, 1193, 1195, 1237 |
| SspI | AATATT | 1 cut(s) | 747 |
| SspMI | CTAG | 2 cut(s) | 252, 354 |
| SstI | GAGCTC | 1 cut(s) | 79 |
| StyD4I | CCNGG | 4 cut(s) | 826, 1135, 1247, 1317 |
| StyI | CCWWGG | 5 cut(s) | 566, 593, 630, 1166, 1218 |
| TaaI | ACNGT | 4 cut(s) | 288, 668, 813, 1330 |
| TaiI | ACGT | 1 cut(s) | 976 |
| TasI | AATT | 5 cut(s) | 83, 498, 548, 620, 1085 |
| TatI | WGTACW | 2 cut(s) | 383, 471 |
| TfiI | GAWTC | 2 cut(s) | 196, 1290 |
| Tru1I | TTAA | 5 cut(s) | 189, 290, 651, 1032, 1119 |
| Tru9I | TTAA | 5 cut(s) | 189, 290, 651, 1032, 1119 |
| TscAI | CASTG | 3 cut(s) | 324, 1082, 1161 |
| TseFI | GTSAC | 4 cut(s) | 398, 557, 645, 895 |
| Tsp45I | GTSAC | 4 cut(s) | 398, 557, 645, 895 |
| TspDTI | ATGAA | 6 cut(s) | 192, 297, 470, 510, 633, 855 |
| TspGWI | ACGGA | 1 cut(s) | 699 |
| TspRI | CASTG | 3 cut(s) | 324, 1082, 1161 |
| VpaK11BI | GGWCC | 3 cut(s) | 361, 1159, 1214 |
| XapI | RAATTY | 1 cut(s) | 548 |
| XmiI | GTMKAC | 1 cut(s) | 214 |
| XmnI | GAANNNNTTC | 1 cut(s) | 465 |
| XspI | CTAG | 2 cut(s) | 252, 354 |