Prupe.2G190700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
23002223 .. 23005993
3771 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G190700.3

Sequence Viewer

Length: 1356 bp
ATGGCAGCAGCAGAAGCAAGGGCCGTGTGGCAGAGGGTAGCTAATCGTTGTTTTGTTCAAGAAGATGCCAAAAGAGCTCCCAAATTAGCTTGCTGCCAGTCCTCATCTTCAACAACTAAGCAGGTTGATGCAGGGCCTGCAACTGCAGCAGAAGGGCCAGATCATCCTGCTGCTGGTTTCGTGCCTCTTAACAGGAATCCTTCATATTCCAGTCTACCCCCCGATGCAAGATGGTGGCTGCAAATGCAACCTAGCTATGGGTACCAAAAGGATTTTACATATGAACAGTTAAATGCGTTGGAGGCCGACATGGAAACACTGAGAGCTGGGTTTGTAAAATCAACACCTAAAACTAGCGAGGTCCGCCAACAGAAAGGAGAATGTACTGATGCTGATGGTCACAAGAACAGCAAAGTCCAAAAGCAAGATGTAAACGCCCAATATGGTAAGGACATGAAGGAACTTGTTCAGTACAAGGATGTGAGAGAAAAATATGAAATTATGGGAATGGATACCATTGATTACCCCTTTTCCAAACAACCCGAGGAATTTTGTTGTGACTATCCTTGGATTGGAGGGGGGAGGGCTGAACCATGGTGGCGGACGACTGATAGAGATGAATTGGCCTCCTTGGTTGCGCAGAAGTCACTTAACCATGTTGAGAACTGTGATCTTCCCCCACCTCAGAAAATGTATCATAAGAGACATCCGTATGCTGATATTGGATGTTCTGACCACAATGTAATATTGGGGACATCTTTAGATGGGAAGGCCCAAACTGGTGGTCTTTCCGATTTGACCAGTCATGCACGGTGCTATTCTGATCCTGGAATAACACATGAAAGAAAGGGAAATGCAGCTGAAGAAGGGCACTCTGACAAATCATTCTGGGATGTCACAGAGACACAACAACTTTCTGAGGGAGAACCTACCAAAGCTCAGCTTATGGAAGCGCTCTGCCATTCTCAAACACGTGCAAGGGAAGCCGAGATGGCAGCAAAGCAAGCTTATGCTGAGAAGGAGCACATTTTTAAGCTCTTCTTCAGACAAGCCTCTCAACTCTTTGCCTATAAGCAGTGGTTCCAATTGCTGCAGCTGGAAACCATTTGCATCCAGATTAAGAACAACGACCAGCCAGGCTCCGCTGTTGTCCCAGTGGTCCTTCCATGGATGCCATTCAAAGGTAGGAAACCGCGGAGGAACTGGCGTAAGGGTCCCAAGGGTAAAAGAGGCAGGCGGGCAGAACCCAGGCACGACATTACCAAGTATGCTGTTGCTTTTGCATTAGGATTCAGTCTTGTTGGTGCTGGCTTGCTCCTGGGATGGACTGTGGGGTGGATGTTACCCCATTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

452

Amino Acids

50.84

Weight (kDa)

8.36

Isoelectric Point (pI)

46.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 639
Acc36I ACCTGC 1 cut(s) 112
Acc65I GGTACC 1 cut(s) 261
AccB1I GGYRCC 1 cut(s) 261
AccI GTMKAC 1 cut(s) 214
AccII CGCG 1 cut(s) 1195
AciI CCGC 6 cut(s) 364, 601, 1143, 1193, 1195, 1237
AclWI GGATC 1 cut(s) 818
AcsI RAATTY 1 cut(s) 548
AcuI CTGAAG 2 cut(s) 882, 1027
AcvI CACGTG 1 cut(s) 974
AfaI GTAC 3 cut(s) 263, 385, 473
AfeI AGCGCT 1 cut(s) 954
AfiI CCNNNNNNNGG 4 cut(s) 173, 257, 572, 1181
AflIII ACRYGT 1 cut(s) 971
AgsI TTSAA 3 cut(s) 59, 111, 1180
AjnI CCWGG 4 cut(s) 826, 1135, 1247, 1317
Alw21I GWGCWC 2 cut(s) 79, 1026
Alw26I GTCTC 2 cut(s) 697, 896
AlwI GGATC 1 cut(s) 818
AlwNI CAGNNNCTG 1 cut(s) 137
Ama87I CYCGRG 1 cut(s) 542
Aor51HI AGCGCT 1 cut(s) 954
AoxI GGCC 6 cut(s) 21, 134, 155, 303, 624, 771
ApoI RAATTY 1 cut(s) 548
ArsI GACNNNNNNTTYG 2 cut(s) 769, 801
Asp700I GAANNNNTTC 1 cut(s) 465
Asp718I GGTACC 1 cut(s) 261
AspLEI GCGC 2 cut(s) 640, 955
AspS9I GGNCC 7 cut(s) 21, 134, 155, 361, 772, 1159, 1214
AvaI CYCGRG 1 cut(s) 542
AvaII GGWCC 3 cut(s) 361, 1159, 1214
BaeGI GKGCMC 1 cut(s) 873
BanI GGYRCC 1 cut(s) 261
BanII GRGCYC 1 cut(s) 79
BbrPI CACGTG 1 cut(s) 974
Bbv12I GWGCWC 2 cut(s) 79, 1026
BccI CCATC 5 cut(s) 225, 389, 758, 985, 1317
BceAI ACGGC 1 cut(s) 8
BciT130I CCWGG 4 cut(s) 828, 1137, 1249, 1319
BciVI GTATCC 1 cut(s) 505
BcoDI GTCTC 2 cut(s) 697, 896
BfaI CTAG 2 cut(s) 252, 354
BfmI CTRYAG 2 cut(s) 144, 1091
BfoI RGCGCY 1 cut(s) 956
BfuAI ACCTGC 1 cut(s) 112
BfuI GTATCC 1 cut(s) 505
BglI GCCNNNNNGGC 1 cut(s) 992
BlpI GCTNAGC 1 cut(s) 939
Bme1390I CCNGG 4 cut(s) 828, 1137, 1249, 1319
Bme18I GGWCC 3 cut(s) 361, 1159, 1214
BmeT110I CYCGRG 1 cut(s) 542
BmgT120I GGNCC 7 cut(s) 21, 134, 155, 361, 772, 1159, 1214
BmiI GGNNCC 5 cut(s) 263, 1082, 1141, 1215, 1216
BmrFI CCNGG 4 cut(s) 828, 1137, 1249, 1319
BmrI ACTGGG 1 cut(s) 1148
BmsI GCATC 6 cut(s) 55, 118, 214, 379, 1119, 1161
BmuI ACTGGG 1 cut(s) 1148
Bpu1102I GCTNAGC 1 cut(s) 939
BsaAI YACGTR 1 cut(s) 974
BsaJI CCNNGG 9 cut(s) 543, 566, 593, 630, 1166, 1193, 1218, 1247, 1318
Bsc4I CCNNNNNNNGG 4 cut(s) 173, 257, 572, 1181
Bse1I ACTGG 6 cut(s) 97, 210, 784, 801, 1154, 1208
BseBI CCWGG 4 cut(s) 828, 1137, 1249, 1319
BseDI CCNNGG 9 cut(s) 543, 566, 593, 630, 1166, 1193, 1218, 1247, 1318
BseGI GGATG 9 cut(s) 163, 484, 706, 731, 898, 1110, 1176, 1328, 1344
BseLI CCNNNNNNNGG 4 cut(s) 173, 257, 572, 1181
BseMII CTCAG 5 cut(s) 311, 698, 909, 953, 1005
BseNI ACTGG 6 cut(s) 97, 210, 784, 801, 1154, 1208
BseSI GKGCMC 1 cut(s) 873
BseYI CCCAGC 1 cut(s) 326
Bsh1236I CGCG 1 cut(s) 1195
BshFI GGCC 6 cut(s) 23, 136, 157, 305, 626, 773
BshNI GGYRCC 1 cut(s) 261
BsiHKAI GWGCWC 2 cut(s) 79, 1026
BsiHKCI CYCGRG 1 cut(s) 542
BslFI GGGAC 3 cut(s) 766, 1136, 1200
BslI CCNNNNNNNGG 4 cut(s) 173, 257, 572, 1181
BsmAI GTCTC 2 cut(s) 697, 896
BsmFI GGGAC 3 cut(s) 766, 1136, 1200
BsnI GGCC 6 cut(s) 23, 136, 157, 305, 626, 773
BsoBI CYCGRG 1 cut(s) 542
Bsp1286I GDGCHC 3 cut(s) 79, 873, 1026
Bsp143I GATC 3 cut(s) 160, 670, 823
Bsp1720I GCTNAGC 1 cut(s) 939
Bsp19I CCATGG 2 cut(s) 593, 1166
BspACI CCGC 6 cut(s) 364, 601, 1143, 1193, 1195, 1237
BspANI GGCC 6 cut(s) 23, 136, 157, 305, 626, 773
BspCNI CTCAG 5 cut(s) 312, 697, 910, 952, 1006
BspFNI CGCG 1 cut(s) 1195
BspLI GGNNCC 5 cut(s) 263, 1082, 1141, 1215, 1216
BspMAI CTGCAG 2 cut(s) 148, 1095
BspMI ACCTGC 1 cut(s) 112
BspPI GGATC 1 cut(s) 818
BspQI GCTCTTC 1 cut(s) 1043
BspT107I GGYRCC 1 cut(s) 261
BsrI ACTGG 6 cut(s) 97, 210, 784, 801, 1154, 1208
BssECI CCNNGG 9 cut(s) 543, 566, 593, 630, 1166, 1193, 1218, 1247, 1318
BssMI GATC 3 cut(s) 160, 670, 823
BssT1I CCWWGG 5 cut(s) 566, 593, 630, 1166, 1218
Bst2UI CCWGG 4 cut(s) 828, 1137, 1249, 1319
Bst4CI ACNGT 4 cut(s) 288, 668, 813, 1330
Bst6I CTCTTC 1 cut(s) 1043
BstAPI GCANNNNNTGC 1 cut(s) 137
BstBAI YACGTR 1 cut(s) 974
BstC8I GCNNGC 7 cut(s) 91, 138, 1005, 1235, 1239, 1309, 1313
BstDEI CTNAG 6 cut(s) 117, 320, 684, 918, 939, 1014
BstDSI CCRYGG 3 cut(s) 593, 1166, 1193
BstF5I GGATG 9 cut(s) 163, 484, 706, 731, 898, 1110, 1176, 1328, 1344
BstFNI CGCG 1 cut(s) 1195
BstH2I RGCGCY 1 cut(s) 956
BstHHI GCGC 2 cut(s) 640, 955
BstKTI GATC 3 cut(s) 163, 673, 826
BstMAI GTCTC 2 cut(s) 697, 896
BstMBI GATC 3 cut(s) 160, 670, 823
BstNI CCWGG 4 cut(s) 828, 1137, 1249, 1319
BstSCI CCNGG 4 cut(s) 826, 1135, 1247, 1317
BstSFI CTRYAG 2 cut(s) 144, 1091
BstSLI GKGCMC 1 cut(s) 873
BstUI CGCG 1 cut(s) 1195
BstXI CCANNNNNNTGG 1 cut(s) 782
BsuI GTATCC 1 cut(s) 505
BsuRI GGCC 6 cut(s) 23, 136, 157, 305, 626, 773
BtgI CCRYGG 3 cut(s) 593, 1166, 1193
BtsCI GGATG 9 cut(s) 163, 484, 706, 731, 898, 1110, 1176, 1328, 1344
BtsI GCAGTG 1 cut(s) 1082
BtsIMutI CAGTG 3 cut(s) 317, 1082, 1161
BveI ACCTGC 1 cut(s) 112
Cac8I GCNNGC 7 cut(s) 91, 138, 1005, 1235, 1239, 1309, 1313
CaiI CAGNNNCTG 1 cut(s) 137
CfoI GCGC 2 cut(s) 640, 955
Cfr13I GGNCC 7 cut(s) 21, 134, 155, 361, 772, 1159, 1214
Cfr42I CCGCGG 1 cut(s) 1196
Csp6I GTAC 3 cut(s) 262, 384, 472
CviAII CATG 7 cut(s) 310, 454, 594, 656, 806, 839, 1167
CviQI GTAC 3 cut(s) 262, 384, 472
DdeI CTNAG 6 cut(s) 117, 320, 684, 918, 939, 1014
DpnI GATC 3 cut(s) 162, 672, 825
DpnII GATC 3 cut(s) 160, 670, 823
Eam1104I CTCTTC 1 cut(s) 1043
EarI CTCTTC 1 cut(s) 1043
EciI GGCGGA 2 cut(s) 353, 616
Ecl136II GAGCTC 1 cut(s) 77
Eco130I CCWWGG 5 cut(s) 566, 593, 630, 1166, 1218
Eco24I GRGCYC 1 cut(s) 79
Eco47I GGWCC 3 cut(s) 361, 1159, 1214
Eco47III AGCGCT 1 cut(s) 954
Eco53kI GAGCTC 1 cut(s) 77
Eco57I CTGAAG 2 cut(s) 882, 1027
Eco72I CACGTG 1 cut(s) 974
Eco88I CYCGRG 1 cut(s) 542
EcoICRI GAGCTC 1 cut(s) 77
EcoO109I RGGNCCY 2 cut(s) 134, 1214
EcoRII CCWGG 4 cut(s) 826, 1135, 1247, 1317
EcoT14I CCWWGG 5 cut(s) 566, 593, 630, 1166, 1218
EcoT38I GRGCYC 1 cut(s) 79
ErhI CCWWGG 5 cut(s) 566, 593, 630, 1166, 1218
FaeI CATG 7 cut(s) 313, 457, 597, 659, 809, 842, 1170
FalI AAGNNNNNCTT 4 cut(s) 927, 959, 1025, 1057
FaqI GGGAC 3 cut(s) 766, 1136, 1200
FatI CATG 7 cut(s) 309, 453, 593, 655, 805, 838, 1166
FauI CCCGC 1 cut(s) 1230
FauNDI CATATG 1 cut(s) 280
FblI GTMKAC 1 cut(s) 214
FokI GGATG 9 cut(s) 150, 491, 693, 738, 905, 1097, 1183, 1335, 1351
FriOI GRGCYC 1 cut(s) 79
FspBI CTAG 2 cut(s) 252, 354
FspI TGCGCA 1 cut(s) 639
GlaI GCGC 2 cut(s) 639, 954
GsaI CCCAGC 1 cut(s) 330
HaeII RGCGCY 1 cut(s) 956
HaeIII GGCC 6 cut(s) 23, 136, 157, 305, 626, 773
HhaI GCGC 2 cut(s) 640, 955
Hin1II CATG 7 cut(s) 313, 457, 597, 659, 809, 842, 1170
Hin6I GCGC 2 cut(s) 638, 953
HinP1I GCGC 2 cut(s) 638, 953
HindIII AAGCTT 1 cut(s) 1005
HinfI GANTC 2 cut(s) 196, 1290
Hpy166II GTNNAC 2 cut(s) 215, 433
Hpy188I TCNGA 7 cut(s) 687, 733, 793, 823, 877, 919, 1046
Hpy188III TCNNGA 2 cut(s) 59, 1114
Hpy8I GTNNAC 2 cut(s) 215, 433
HpyAV CCTTC 7 cut(s) 146, 210, 451, 763, 860, 1012, 1172
HpyCH4III ACNGT 4 cut(s) 288, 668, 813, 1330
HpyCH4IV ACGT 1 cut(s) 973
HpyF3I CTNAG 6 cut(s) 117, 320, 684, 918, 939, 1014
HpySE526I ACGT 1 cut(s) 973
Hsp92II CATG 7 cut(s) 313, 457, 597, 659, 809, 842, 1170
HspAI GCGC 2 cut(s) 638, 953
KflI GGGWCCC 1 cut(s) 1214
KpnI GGTACC 1 cut(s) 265
KspI CCGCGG 1 cut(s) 1196
Kzo9I GATC 3 cut(s) 160, 670, 823
LguI GCTCTTC 1 cut(s) 1043
LmnI GCTCC 4 cut(s) 82, 1021, 1145, 1320
LweI GCATC 6 cut(s) 55, 118, 214, 379, 1119, 1161
MaeI CTAG 2 cut(s) 252, 354
MaeII ACGT 1 cut(s) 973
MaeIII GTNAC 5 cut(s) 398, 557, 645, 895, 1341
MalI GATC 3 cut(s) 162, 672, 825
MboI GATC 3 cut(s) 160, 670, 823
MboII GAAGA 6 cut(s) 74, 99, 665, 875, 1030, 1033
MfeI CAATTG 1 cut(s) 1085
MhlI GDGCHC 3 cut(s) 79, 873, 1026
MluCI AATT 5 cut(s) 83, 498, 548, 620, 1085
MmeI TCCRAC 1 cut(s) 279
MroXI GAANNNNTTC 1 cut(s) 465
MseI TTAA 5 cut(s) 189, 290, 651, 1032, 1119
MslI CAYNNNNRTG 1 cut(s) 711
MspA1I CMGCKG 4 cut(s) 860, 1096, 1145, 1195
MspR9I CCNGG 4 cut(s) 828, 1137, 1249, 1319
MunI CAATTG 1 cut(s) 1085
MvaI CCWGG 4 cut(s) 828, 1137, 1249, 1319
MvnI CGCG 1 cut(s) 1195
NcoI CCATGG 2 cut(s) 593, 1166
NdeI CATATG 1 cut(s) 280
NdeII GATC 3 cut(s) 160, 670, 823
NlaIII CATG 7 cut(s) 313, 457, 597, 659, 809, 842, 1170
NlaIV GGNNCC 5 cut(s) 263, 1082, 1141, 1215, 1216
NmeAIII GCCGAG 1 cut(s) 1012
NmuCI GTSAC 4 cut(s) 398, 557, 645, 895
NsbI TGCGCA 1 cut(s) 639
PciSI GCTCTTC 1 cut(s) 1043
PdmI GAANNNNTTC 1 cut(s) 465
PfeI GAWTC 2 cut(s) 196, 1290
PfoI TCCNGGA 1 cut(s) 826
PmaCI CACGTG 1 cut(s) 974
PmlI CACGTG 1 cut(s) 974
Ppu21I YACGTR 1 cut(s) 974
PpuMI RGGWCCY 1 cut(s) 1214
Psp124BI GAGCTC 1 cut(s) 79
Psp5II RGGWCCY 1 cut(s) 1214
Psp6I CCWGG 4 cut(s) 826, 1135, 1247, 1317
PspCI CACGTG 1 cut(s) 974
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 4 cut(s) 826, 1135, 1247, 1317
PspN4I GGNNCC 5 cut(s) 263, 1082, 1141, 1215, 1216
PspPI GGNCC 7 cut(s) 21, 134, 155, 361, 772, 1159, 1214
PspPPI RGGWCCY 1 cut(s) 1214
PstI CTGCAG 2 cut(s) 148, 1095
PstNI CAGNNNCTG 1 cut(s) 137
PvuII CAGCTG 2 cut(s) 860, 1096
RsaI GTAC 3 cut(s) 263, 385, 473
RsaNI GTAC 3 cut(s) 262, 384, 472
RseI CAYNNNNRTG 1 cut(s) 711
SacI GAGCTC 1 cut(s) 79
SacII CCGCGG 1 cut(s) 1196
SapI GCTCTTC 1 cut(s) 1043
SaqAI TTAA 5 cut(s) 189, 290, 651, 1032, 1119
Sau3AI GATC 3 cut(s) 160, 670, 823
Sau96I GGNCC 7 cut(s) 21, 134, 155, 361, 772, 1159, 1214
ScrFI CCNGG 4 cut(s) 828, 1137, 1249, 1319
SduI GDGCHC 3 cut(s) 79, 873, 1026
SfaNI GCATC 6 cut(s) 55, 118, 214, 379, 1119, 1161
SfcI CTRYAG 2 cut(s) 144, 1091
Sfr303I CCGCGG 1 cut(s) 1196
SgrBI CCGCGG 1 cut(s) 1196
SinI GGWCC 3 cut(s) 361, 1159, 1214
SmiMI CAYNNNNRTG 1 cut(s) 711
Sse9I AATT 5 cut(s) 83, 498, 548, 620, 1085
SsiI CCGC 6 cut(s) 364, 601, 1143, 1193, 1195, 1237
SspI AATATT 1 cut(s) 747
SspMI CTAG 2 cut(s) 252, 354
SstI GAGCTC 1 cut(s) 79
StyD4I CCNGG 4 cut(s) 826, 1135, 1247, 1317
StyI CCWWGG 5 cut(s) 566, 593, 630, 1166, 1218
TaaI ACNGT 4 cut(s) 288, 668, 813, 1330
TaiI ACGT 1 cut(s) 976
TasI AATT 5 cut(s) 83, 498, 548, 620, 1085
TatI WGTACW 2 cut(s) 383, 471
TfiI GAWTC 2 cut(s) 196, 1290
Tru1I TTAA 5 cut(s) 189, 290, 651, 1032, 1119
Tru9I TTAA 5 cut(s) 189, 290, 651, 1032, 1119
TscAI CASTG 3 cut(s) 324, 1082, 1161
TseFI GTSAC 4 cut(s) 398, 557, 645, 895
Tsp45I GTSAC 4 cut(s) 398, 557, 645, 895
TspDTI ATGAA 6 cut(s) 192, 297, 470, 510, 633, 855
TspGWI ACGGA 1 cut(s) 699
TspRI CASTG 3 cut(s) 324, 1082, 1161
VpaK11BI GGWCC 3 cut(s) 361, 1159, 1214
XapI RAATTY 1 cut(s) 548
XmiI GTMKAC 1 cut(s) 214
XmnI GAANNNNTTC 1 cut(s) 465
XspI CTAG 2 cut(s) 252, 354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.