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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46550 AT2G46550 AT2G46550 |
| fragaria_vesca | FvH4_7g16870 FvH4_7g31981 |
| malus_domestica | MD01G1083700.v1.1 MD01G1222700.v1.1 MD07G1152400.v1.1 MD07G1293300.v1.1 |
| prunus_persica | Prupe.2G190700_v2.0.a1 Prupe.2G190700_v2.0.a1 Prupe.2G190700_v2.0.a1 Prupe.2G313100_v2.0.a1 Prupe.2G313100_v2.0.a1 Prupe.2G313100_v2.0.a1 |
| pyrus_communis | pycom01g23210 pycom07g15050 |
| rosa_chinensis | RchiOBHm_Chr1g0360101 RchiOBHm_Chr1g0381491 |
| rosa_laevigata | RLG00000026228 RLG00000027833 |
| rosa_multiflora | Rmu_co8234723.1_g000001 Rmu_co8261609.1_g000001 Rmu_co8290353.1_g000001 Rmu_sc0003688.1_g000008 Rmu_sc0006872.1_g000027 Rmu_sc0040454.1_g000001 Rmu_ssc0000368.1_g000040 |
| rosa_roxburghii | Rroxscaffold_4G00278620 |
| rosa_rugosa | Rorug01G0275000 Rorug01G0275100 Rorug01G0428900 |
| rosa_samantha | Rh1AG288900 Rh1BG254400 Rh1BG409400 Rh1CG271900 Rh1CG423900 Rh1DG283500 Rh1DG440700 |
| rosa_wichuraiana | Rw1G025620 Rw1G039470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 189 |
| Acc36I | ACCTGC | 2 cut(s) | 343, 665 |
| AccB1I | GGYRCC | 2 cut(s) | 208, 1334 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 637 |
| AccII | CGCG | 1 cut(s) | 1015 |
| AccIII | TCCGGA | 1 cut(s) | 317 |
| AclWI | GGATC | 2 cut(s) | 80, 497 |
| AcsI | RAATTY | 1 cut(s) | 263 |
| AcuI | CTGAAG | 2 cut(s) | 615, 849 |
| AdeI | CACNNNGTG | 1 cut(s) | 222 |
| AfaI | GTAC | 1 cut(s) | 922 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 248, 249, 466, 637, 1184, 1223, 1251, 1252 |
| AgsI | TTSAA | 7 cut(s) | 232, 305, 450, 580, 719, 1087, 1142 |
| AjiI | CACGTC | 1 cut(s) | 67 |
| AjnI | CCWGG | 2 cut(s) | 172, 234 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 73, 105, 231, 263 |
| AluBI | AGCT | 8 cut(s) | 280, 591, 858, 980, 985, 995, 1028, 1199 |
| AluI | AGCT | 8 cut(s) | 280, 591, 858, 980, 985, 995, 1028, 1199 |
| Alw21I | GWGCWC | 3 cut(s) | 136, 593, 1068 |
| Alw44I | GTGCAC | 1 cut(s) | 132 |
| AlwI | GGATC | 2 cut(s) | 80, 497 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 125, 494 |
| Ama87I | CYCGRG | 1 cut(s) | 529 |
| Aor13HI | TCCGGA | 1 cut(s) | 317 |
| AoxI | GGCC | 4 cut(s) | 251, 746, 772, 1242 |
| ApaI | GGGCCC | 1 cut(s) | 776 |
| ApaLI | GTGCAC | 1 cut(s) | 132 |
| ApeKI | GCWGC | 5 cut(s) | 5, 8, 421, 1037, 1132 |
| ApoI | RAATTY | 1 cut(s) | 263 |
| AspLEI | GCGC | 2 cut(s) | 669, 1251 |
| AspS9I | GGNCC | 7 cut(s) | 251, 526, 747, 772, 773, 1212, 1243 |
| AsuC2I | CCSGG | 3 cut(s) | 530, 531, 1186 |
| AvaI | CYCGRG | 1 cut(s) | 529 |
| AvaII | GGWCC | 2 cut(s) | 526, 1212 |
| BaeGI | GKGCMC | 2 cut(s) | 136, 776 |
| BanI | GGYRCC | 2 cut(s) | 208, 1334 |
| BanII | GRGCYC | 3 cut(s) | 593, 776, 1191 |
| BbsI | GAAGAC | 2 cut(s) | 69, 606 |
| Bbv12I | GWGCWC | 3 cut(s) | 136, 593, 1068 |
| BbvCI | CCTCAGC | 1 cut(s) | 1029 |
| BbvI | GCAGC | 5 cut(s) | 17, 20, 433, 1049, 1119 |
| BccI | CCATC | 3 cut(s) | 805, 904, 1347 |
| BceAI | ACGGC | 1 cut(s) | 761 |
| BciT130I | CCWGG | 2 cut(s) | 174, 236 |
| BclI | TGATCA | 3 cut(s) | 160, 553, 805 |
| BcnI | CCSGG | 3 cut(s) | 530, 531, 1186 |
| BfmI | CTRYAG | 1 cut(s) | 672 |
| BfoI | RGCGCY | 1 cut(s) | 670 |
| BfuAI | ACCTGC | 2 cut(s) | 343, 665 |
| BglII | AGATCT | 1 cut(s) | 307 |
| BisI | GCNGC | 5 cut(s) | 6, 9, 422, 1038, 1133 |
| BlpI | GCTNAGC | 1 cut(s) | 981 |
| BlsI | GCNGC | 5 cut(s) | 7, 10, 423, 1039, 1134 |
| Bme1390I | CCNGG | 5 cut(s) | 174, 236, 530, 531, 1186 |
| Bme18I | GGWCC | 2 cut(s) | 526, 1212 |
| BmeT110I | CYCGRG | 1 cut(s) | 529 |
| BmgBI | CACGTC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 7 cut(s) | 251, 526, 747, 772, 773, 1212, 1243 |
| BmiI | GGNNCC | 9 cut(s) | 210, 240, 527, 528, 749, 774, 1124, 1214, 1336 |
| BmrFI | CCNGG | 5 cut(s) | 174, 236, 530, 531, 1186 |
| BmrI | ACTGGG | 2 cut(s) | 625, 1325 |
| BmsI | GCATC | 1 cut(s) | 1103 |
| BmuI | ACTGGG | 2 cut(s) | 625, 1325 |
| BpiI | GAAGAC | 2 cut(s) | 69, 606 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 61, 93 |
| BpmI | CTGGAG | 2 cut(s) | 132, 1139 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1029 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 981 |
| BpuEI | CTTGAG | 3 cut(s) | 311, 467, 607 |
| BpuMI | CCSGG | 3 cut(s) | 530, 531, 1186 |
| BsaAI | YACGTR | 1 cut(s) | 270 |
| BsaBI | GATNNNNATC | 1 cut(s) | 555 |
| BsaJI | CCNNGG | 8 cut(s) | 529, 530, 659, 696, 743, 1208, 1277, 1348 |
| BsaWI | WCCGGW | 1 cut(s) | 317 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 527, 557 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 248, 249, 466, 637, 1184, 1223, 1251, 1252 |
| Bse118I | RCCGGY | 2 cut(s) | 1331, 1337 |
| Bse1I | ACTGG | 4 cut(s) | 210, 499, 631, 1320 |
| Bse8I | GATNNNNATC | 1 cut(s) | 555 |
| BseAI | TCCGGA | 1 cut(s) | 317 |
| BseBI | CCWGG | 2 cut(s) | 174, 236 |
| BseDI | CCNNGG | 8 cut(s) | 529, 530, 659, 696, 743, 1208, 1277, 1348 |
| BseGI | GGATG | 2 cut(s) | 940, 1358 |
| BseJI | GATNNNNATC | 1 cut(s) | 555 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 248, 249, 466, 637, 1184, 1223, 1251, 1252 |
| BseMII | CTCAG | 5 cut(s) | 129, 636, 719, 972, 1020 |
| BseNI | ACTGG | 4 cut(s) | 210, 499, 631, 1320 |
| BseSI | GKGCMC | 2 cut(s) | 136, 776 |
| BseXI | GCAGC | 5 cut(s) | 17, 20, 433, 1049, 1119 |
| BseYI | CCCAGC | 1 cut(s) | 1245 |
| Bsh1236I | CGCG | 1 cut(s) | 1015 |
| BshFI | GGCC | 4 cut(s) | 253, 748, 774, 1244 |
| BshNI | GGYRCC | 2 cut(s) | 208, 1334 |
| BsiHKAI | GWGCWC | 3 cut(s) | 136, 593, 1068 |
| BsiHKCI | CYCGRG | 1 cut(s) | 529 |
| BsiSI | CCGG | 5 cut(s) | 318, 530, 1185, 1332, 1338 |
| BslFI | GGGAC | 2 cut(s) | 539, 1198 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 248, 249, 466, 637, 1184, 1223, 1251, 1252 |
| BsmFI | GGGAC | 2 cut(s) | 539, 1198 |
| BsmI | GAATGC | 2 cut(s) | 148, 477 |
| BsnI | GGCC | 4 cut(s) | 253, 748, 774, 1244 |
| BsoBI | CYCGRG | 1 cut(s) | 529 |
| Bsp120I | GGGCCC | 1 cut(s) | 772 |
| Bsp1286I | GDGCHC | 5 cut(s) | 136, 593, 776, 1068, 1191 |
| Bsp13I | TCCGGA | 1 cut(s) | 317 |
| Bsp143I | GATC | 8 cut(s) | 72, 160, 307, 502, 553, 736, 805, 967 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 981 |
| Bsp19I | CCATGG | 2 cut(s) | 659, 1208 |
| BspANI | GGCC | 4 cut(s) | 253, 748, 774, 1244 |
| BspCNI | CTCAG | 5 cut(s) | 130, 637, 718, 973, 1021 |
| BspEI | TCCGGA | 1 cut(s) | 317 |
| BspFNI | CGCG | 1 cut(s) | 1015 |
| BspHI | TCATGA | 1 cut(s) | 561 |
| BspLI | GGNNCC | 9 cut(s) | 210, 240, 527, 528, 749, 774, 1124, 1214, 1336 |
| BspMAI | CTGCAG | 1 cut(s) | 676 |
| BspMI | ACCTGC | 2 cut(s) | 343, 665 |
| BspPI | GGATC | 2 cut(s) | 80, 497 |
| BspT107I | GGYRCC | 2 cut(s) | 208, 1334 |
| BsrFI | RCCGGY | 2 cut(s) | 1331, 1337 |
| BsrI | ACTGG | 4 cut(s) | 210, 499, 631, 1320 |
| BssAI | RCCGGY | 2 cut(s) | 1331, 1337 |
| BssECI | CCNNGG | 8 cut(s) | 529, 530, 659, 696, 743, 1208, 1277, 1348 |
| BssMI | GATC | 8 cut(s) | 72, 160, 307, 502, 553, 736, 805, 967 |
| BssT1I | CCWWGG | 5 cut(s) | 659, 696, 1208, 1277, 1348 |
| Bst2UI | CCWGG | 2 cut(s) | 174, 236 |
| Bst4CI | ACNGT | 5 cut(s) | 47, 403, 612, 893, 920 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 23 |
| BstBAI | YACGTR | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 4 cut(s) | 1017, 1047, 1201, 1229 |
| BstDEI | CTNAG | 7 cut(s) | 138, 219, 516, 645, 705, 981, 1029 |
| BstDSI | CCRYGG | 3 cut(s) | 659, 743, 1208 |
| BstF5I | GGATG | 2 cut(s) | 940, 1358 |
| BstFNI | CGCG | 1 cut(s) | 1015 |
| BstH2I | RGCGCY | 1 cut(s) | 670 |
| BstHHI | GCGC | 2 cut(s) | 669, 1251 |
| BstKTI | GATC | 8 cut(s) | 75, 163, 310, 505, 556, 739, 808, 970 |
| BstMBI | GATC | 8 cut(s) | 72, 160, 307, 502, 553, 736, 805, 967 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 14, 23, 1025, 1034, 1046, 1129 |
| BstNI | CCWGG | 2 cut(s) | 174, 236 |
| BstNSI | RCATGY | 1 cut(s) | 184 |
| BstSCI | CCNGG | 5 cut(s) | 172, 234, 528, 529, 1184 |
| BstSFI | CTRYAG | 1 cut(s) | 672 |
| BstSLI | GKGCMC | 2 cut(s) | 136, 776 |
| BstUI | CGCG | 1 cut(s) | 1015 |
| BstV1I | GCAGC | 5 cut(s) | 17, 20, 433, 1049, 1119 |
| BstV2I | GAAGAC | 2 cut(s) | 69, 606 |
| BstX2I | RGATCY | 1 cut(s) | 307 |
| BstYI | RGATCY | 1 cut(s) | 307 |
| BsuRI | GGCC | 4 cut(s) | 253, 748, 774, 1244 |
| BtgI | CCRYGG | 3 cut(s) | 659, 743, 1208 |
| BtrI | CACGTC | 1 cut(s) | 67 |
| BtsCI | GGATG | 2 cut(s) | 940, 1358 |
| BtsI | GCAGTG | 2 cut(s) | 38, 1124 |
| BtsIMutI | CAGTG | 5 cut(s) | 38, 365, 638, 1124, 1313 |
| BveI | ACCTGC | 2 cut(s) | 343, 665 |
| Cac8I | GCNNGC | 4 cut(s) | 1017, 1047, 1201, 1229 |
| CaiI | CAGNNNCTG | 2 cut(s) | 125, 494 |
| CciI | TCATGA | 1 cut(s) | 561 |
| CfoI | GCGC | 2 cut(s) | 669, 1251 |
| Cfr10I | RCCGGY | 2 cut(s) | 1331, 1337 |
| Cfr13I | GGNCC | 7 cut(s) | 251, 526, 747, 772, 773, 1212, 1243 |
| Cfr9I | CCCGGG | 1 cut(s) | 529 |
| CsiI | ACCWGGT | 1 cut(s) | 172 |
| Csp6I | GTAC | 1 cut(s) | 921 |
| CviAII | CATG | 9 cut(s) | 27, 181, 426, 562, 660, 849, 881, 1209, 1234 |
| CviQI | GTAC | 1 cut(s) | 921 |
| DdeI | CTNAG | 7 cut(s) | 138, 219, 516, 645, 705, 981, 1029 |
| DpnI | GATC | 8 cut(s) | 74, 162, 309, 504, 555, 738, 807, 969 |
| DpnII | GATC | 8 cut(s) | 72, 160, 307, 502, 553, 736, 805, 967 |
| DraIII | CACNNNGTG | 1 cut(s) | 222 |
| Ecl136II | GAGCTC | 1 cut(s) | 591 |
| Eco130I | CCWWGG | 5 cut(s) | 659, 696, 1208, 1277, 1348 |
| Eco24I | GRGCYC | 3 cut(s) | 593, 776, 1191 |
| Eco47I | GGWCC | 2 cut(s) | 526, 1212 |
| Eco53kI | GAGCTC | 1 cut(s) | 591 |
| Eco57I | CTGAAG | 2 cut(s) | 615, 849 |
| Eco88I | CYCGRG | 1 cut(s) | 529 |
| EcoICRI | GAGCTC | 1 cut(s) | 591 |
| EcoO109I | RGGNCCY | 3 cut(s) | 526, 772, 773 |
| EcoRI | GAATTC | 1 cut(s) | 263 |
| EcoRII | CCWGG | 2 cut(s) | 172, 234 |
| EcoT14I | CCWWGG | 5 cut(s) | 659, 696, 1208, 1277, 1348 |
| EcoT38I | GRGCYC | 3 cut(s) | 593, 776, 1191 |
| ErhI | CCWWGG | 5 cut(s) | 659, 696, 1208, 1277, 1348 |
| FaeI | CATG | 9 cut(s) | 30, 184, 429, 565, 663, 852, 884, 1212, 1237 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 73, 105, 847, 879 |
| FaqI | GGGAC | 2 cut(s) | 539, 1198 |
| FatI | CATG | 9 cut(s) | 26, 180, 425, 561, 659, 848, 880, 1208, 1233 |
| FbaI | TGATCA | 3 cut(s) | 160, 553, 805 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 9, 422, 1038, 1133 |
| FokI | GGATG | 2 cut(s) | 947, 1365 |
| FriOI | GRGCYC | 3 cut(s) | 593, 776, 1191 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 9, 422, 1038, 1133 |
| GlaI | GCGC | 2 cut(s) | 668, 1250 |
| GluI | GCNGC | 5 cut(s) | 6, 9, 422, 1038, 1133 |
| GsaI | CCCAGC | 1 cut(s) | 1249 |
| GsuI | CTGGAG | 2 cut(s) | 132, 1139 |
| HaeII | RGCGCY | 1 cut(s) | 670 |
| HaeIII | GGCC | 4 cut(s) | 253, 748, 774, 1244 |
| HapII | CCGG | 5 cut(s) | 318, 530, 1185, 1332, 1338 |
| HhaI | GCGC | 2 cut(s) | 669, 1251 |
| Hin1II | CATG | 9 cut(s) | 30, 184, 429, 565, 663, 852, 884, 1212, 1237 |
| Hin6I | GCGC | 2 cut(s) | 667, 1249 |
| HinP1I | GCGC | 2 cut(s) | 667, 1249 |
| HindIII | AAGCTT | 2 cut(s) | 856, 993 |
| HinfI | GANTC | 5 cut(s) | 122, 407, 572, 626, 884 |
| HpaII | CCGG | 5 cut(s) | 318, 530, 1185, 1332, 1338 |
| Hpy166II | GTNNAC | 1 cut(s) | 134 |
| Hpy188I | TCNGA | 7 cut(s) | 127, 202, 550, 595, 708, 810, 889 |
| Hpy188III | TCNNGA | 4 cut(s) | 149, 290, 318, 562 |
| Hpy8I | GTNNAC | 1 cut(s) | 134 |
| HpyAV | CCTTC | 5 cut(s) | 146, 763, 786, 1054, 1234 |
| HpyCH4III | ACNGT | 5 cut(s) | 47, 403, 612, 893, 920 |
| HpyCH4IV | ACGT | 2 cut(s) | 66, 269 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 14, 23, 1025, 1034, 1046, 1129 |
| HpyF3I | CTNAG | 7 cut(s) | 138, 219, 516, 645, 705, 981, 1029 |
| HpySE526I | ACGT | 2 cut(s) | 66, 269 |
| Hsp92II | CATG | 9 cut(s) | 30, 184, 429, 565, 663, 852, 884, 1212, 1237 |
| HspAI | GCGC | 2 cut(s) | 667, 1249 |
| KflI | GGGWCCC | 1 cut(s) | 526 |
| Kpn2I | TCCGGA | 1 cut(s) | 317 |
| Ksp22I | TGATCA | 3 cut(s) | 160, 553, 805 |
| Kzo9I | GATC | 8 cut(s) | 72, 160, 307, 502, 553, 736, 805, 967 |
| LmnI | GCTCC | 6 cut(s) | 82, 151, 418, 1063, 1128, 1350 |
| Lsp1109I | GCAGC | 5 cut(s) | 17, 20, 433, 1049, 1119 |
| LweI | GCATC | 1 cut(s) | 1103 |
| MabI | ACCWGGT | 1 cut(s) | 172 |
| MaeII | ACGT | 2 cut(s) | 66, 269 |
| MaeIII | GTNAC | 4 cut(s) | 347, 439, 711, 869 |
| MalI | GATC | 8 cut(s) | 74, 162, 309, 504, 555, 738, 807, 969 |
| MboI | GATC | 8 cut(s) | 72, 160, 307, 502, 553, 736, 805, 967 |
| MboII | GAAGA | 9 cut(s) | 74, 81, 99, 317, 606, 608, 731, 974, 1249 |
| MfeI | CAATTG | 3 cut(s) | 509, 801, 1127 |
| MflI | RGATCY | 1 cut(s) | 307 |
| MhlI | GDGCHC | 5 cut(s) | 136, 593, 776, 1068, 1191 |
| MlyI | GAGTC | 1 cut(s) | 893 |
| MmeI | TCCRAC | 1 cut(s) | 969 |
| MnlI | CCTC | 7 cut(s) | 63, 264, 286, 516, 931, 1024, 1163 |
| MroI | TCCGGA | 1 cut(s) | 317 |
| MseI | TTAA | 3 cut(s) | 327, 756, 1384 |
| MslI | CAYNNNNRTG | 1 cut(s) | 31 |
| MspI | CCGG | 5 cut(s) | 318, 530, 1185, 1332, 1338 |
| MspR9I | CCNGG | 5 cut(s) | 174, 236, 530, 531, 1186 |
| MunI | CAATTG | 3 cut(s) | 509, 801, 1127 |
| Mva1269I | GAATGC | 2 cut(s) | 148, 477 |
| MvaI | CCWGG | 2 cut(s) | 174, 236 |
| MvnI | CGCG | 1 cut(s) | 1015 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 14, 23, 1025, 1034, 1046, 1129 |
| NciI | CCSGG | 3 cut(s) | 530, 531, 1186 |
| NcoI | CCATGG | 2 cut(s) | 659, 1208 |
| NdeII | GATC | 8 cut(s) | 72, 160, 307, 502, 553, 736, 805, 967 |
| NlaIII | CATG | 9 cut(s) | 30, 184, 429, 565, 663, 852, 884, 1212, 1237 |
| NlaIV | GGNNCC | 9 cut(s) | 210, 240, 527, 528, 749, 774, 1124, 1214, 1336 |
| NmuCI | GTSAC | 4 cut(s) | 347, 439, 711, 869 |
| NspI | RCATGY | 1 cut(s) | 184 |
| PagI | TCATGA | 1 cut(s) | 561 |
| PctI | GAATGC | 2 cut(s) | 148, 477 |
| PfeI | GAWTC | 4 cut(s) | 122, 407, 572, 626 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 637 |
| PkrI | GCNGC | 5 cut(s) | 7, 10, 423, 1039, 1134 |
| PleI | GAGTC | 1 cut(s) | 892 |
| PpsI | GAGTC | 1 cut(s) | 892 |
| Ppu21I | YACGTR | 1 cut(s) | 270 |
| PpuMI | RGGWCCY | 1 cut(s) | 526 |
| PsiI | TTATAA | 1 cut(s) | 189 |
| Psp124BI | GAGCTC | 1 cut(s) | 593 |
| Psp5II | RGGWCCY | 1 cut(s) | 526 |
| Psp6I | CCWGG | 2 cut(s) | 172, 234 |
| PspFI | CCCAGC | 1 cut(s) | 1245 |
| PspGI | CCWGG | 2 cut(s) | 172, 234 |
| PspN4I | GGNNCC | 9 cut(s) | 210, 240, 527, 528, 749, 774, 1124, 1214, 1336 |
| PspOMI | GGGCCC | 1 cut(s) | 772 |
| PspPI | GGNCC | 7 cut(s) | 251, 526, 747, 772, 773, 1212, 1243 |
| PspPPI | RGGWCCY | 1 cut(s) | 526 |
| PstI | CTGCAG | 1 cut(s) | 676 |
| PstNI | CAGNNNCTG | 2 cut(s) | 125, 494 |
| PsuI | RGATCY | 1 cut(s) | 307 |
| RsaI | GTAC | 1 cut(s) | 922 |
| RsaNI | GTAC | 1 cut(s) | 921 |
| RseI | CAYNNNNRTG | 1 cut(s) | 31 |
| SacI | GAGCTC | 1 cut(s) | 593 |
| SaqAI | TTAA | 3 cut(s) | 327, 756, 1384 |
| SatI | GCNGC | 5 cut(s) | 6, 9, 422, 1038, 1133 |
| Sau3AI | GATC | 8 cut(s) | 72, 160, 307, 502, 553, 736, 805, 967 |
| Sau96I | GGNCC | 7 cut(s) | 251, 526, 747, 772, 773, 1212, 1243 |
| SchI | GAGTC | 1 cut(s) | 893 |
| ScrFI | CCNGG | 5 cut(s) | 174, 236, 530, 531, 1186 |
| SduI | GDGCHC | 5 cut(s) | 136, 593, 776, 1068, 1191 |
| SexAI | ACCWGGT | 1 cut(s) | 172 |
| SfaNI | GCATC | 1 cut(s) | 1103 |
| SfcI | CTRYAG | 1 cut(s) | 672 |
| SinI | GGWCC | 2 cut(s) | 526, 1212 |
| SmaI | CCCGGG | 1 cut(s) | 531 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 31 |
| SmlI | CTYRAG | 3 cut(s) | 290, 482, 586 |
| SmoI | CTYRAG | 3 cut(s) | 290, 482, 586 |
| SstI | GAGCTC | 1 cut(s) | 593 |
| StyD4I | CCNGG | 5 cut(s) | 172, 234, 528, 529, 1184 |
| StyI | CCWWGG | 5 cut(s) | 659, 696, 1208, 1277, 1348 |
| TaaI | ACNGT | 5 cut(s) | 47, 403, 612, 893, 920 |
| TaiI | ACGT | 2 cut(s) | 69, 272 |
| TaqI | TCGA | 2 cut(s) | 786, 970 |
| TfiI | GAWTC | 4 cut(s) | 122, 407, 572, 626 |
| Tru1I | TTAA | 3 cut(s) | 327, 756, 1384 |
| Tru9I | TTAA | 3 cut(s) | 327, 756, 1384 |
| TscAI | CASTG | 5 cut(s) | 38, 365, 638, 1124, 1320 |
| TseFI | GTSAC | 4 cut(s) | 347, 439, 711, 869 |
| TseI | GCWGC | 5 cut(s) | 5, 8, 421, 1037, 1132 |
| Tsp45I | GTSAC | 4 cut(s) | 347, 439, 711, 869 |
| TspDTI | ATGAA | 6 cut(s) | 99, 288, 399, 578, 786, 1250 |
| TspGWI | ACGGA | 1 cut(s) | 87 |
| TspMI | CCCGGG | 1 cut(s) | 529 |
| TspRI | CASTG | 5 cut(s) | 38, 365, 638, 1124, 1320 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 637 |
| VneI | GTGCAC | 1 cut(s) | 132 |
| VpaK11BI | GGWCC | 2 cut(s) | 526, 1212 |
| XapI | RAATTY | 1 cut(s) | 263 |
| XceI | RCATGY | 1 cut(s) | 184 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1253 |
| XmaI | CCCGGG | 1 cut(s) | 529 |