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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46550 AT2G46550 AT2G46550 |
| fragaria_vesca | FvH4_7g16870 FvH4_7g31981 |
| malus_domestica | MD01G1083700.v1.1 MD01G1222700.v1.1 MD07G1152400.v1.1 MD07G1293300.v1.1 |
| prunus_persica | Prupe.2G190700_v2.0.a1 Prupe.2G190700_v2.0.a1 Prupe.2G190700_v2.0.a1 Prupe.2G313100_v2.0.a1 Prupe.2G313100_v2.0.a1 Prupe.2G313100_v2.0.a1 |
| pyrus_communis | pycom01g23210 pycom07g15050 |
| rosa_chinensis | RchiOBHm_Chr1g0360101 RchiOBHm_Chr1g0381491 |
| rosa_laevigata | RLG00000026228 RLG00000027833 |
| rosa_multiflora | Rmu_co8234723.1_g000001 Rmu_co8261609.1_g000001 Rmu_co8290353.1_g000001 Rmu_sc0003688.1_g000008 Rmu_sc0006872.1_g000027 Rmu_sc0040454.1_g000001 Rmu_ssc0000368.1_g000040 |
| rosa_roxburghii | Rroxscaffold_4G00278620 |
| rosa_rugosa | Rorug01G0275000 Rorug01G0275100 Rorug01G0428900 |
| rosa_samantha | Rh1AG288900 Rh1BG254400 Rh1BG409400 Rh1CG271900 Rh1CG423900 Rh1DG283500 Rh1DG440700 |
| rosa_wichuraiana | Rw1G025620 Rw1G039470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 112 |
| Acc65I | GGTACC | 1 cut(s) | 261 |
| AccB1I | GGYRCC | 2 cut(s) | 261, 1211 |
| AccI | GTMKAC | 1 cut(s) | 214 |
| AciI | CCGC | 4 cut(s) | 5, 399, 610, 1192 |
| AcoI | YGGCCR | 1 cut(s) | 1236 |
| AcsI | RAATTY | 1 cut(s) | 380 |
| AfaI | GTAC | 1 cut(s) | 263 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 173, 257, 581, 821, 836, 1178, 1245 |
| AgsI | TTSAA | 1 cut(s) | 482 |
| AjnI | CCWGG | 2 cut(s) | 1244, 1314 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 740, 772 |
| AluBI | AGCT | 9 cut(s) | 41, 77, 89, 255, 326, 932, 937, 1001, 1030 |
| AluI | AGCT | 9 cut(s) | 41, 77, 89, 255, 326, 932, 937, 1001, 1030 |
| Alw21I | GWGCWC | 2 cut(s) | 79, 1020 |
| Alw26I | GTCTC | 4 cut(s) | 400, 706, 879, 1298 |
| AoxI | GGCC | 4 cut(s) | 134, 155, 780, 1236 |
| ApeKI | GCWGC | 5 cut(s) | 8, 93, 238, 989, 1084 |
| ApoI | RAATTY | 1 cut(s) | 380 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 477 |
| Asp718I | GGTACC | 1 cut(s) | 261 |
| AspLEI | GCGC | 1 cut(s) | 449 |
| AspS9I | GGNCC | 4 cut(s) | 134, 155, 361, 781 |
| AsuC2I | CCSGG | 1 cut(s) | 1151 |
| AsuHPI | GGTGA | 1 cut(s) | 929 |
| AvaII | GGWCC | 1 cut(s) | 361 |
| BaeGI | GKGCMC | 1 cut(s) | 867 |
| BanI | GGYRCC | 2 cut(s) | 261, 1211 |
| BanII | GRGCYC | 1 cut(s) | 79 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 404, 436 |
| BauI | CACGAG | 1 cut(s) | 966 |
| BbsI | GAAGAC | 2 cut(s) | 99, 419 |
| Bbv12I | GWGCWC | 2 cut(s) | 79, 1020 |
| BbvI | GCAGC | 5 cut(s) | 20, 80, 225, 1001, 1071 |
| BccI | CCATC | 4 cut(s) | 225, 511, 1228, 1314 |
| BciT130I | CCWGG | 2 cut(s) | 1246, 1316 |
| BciVI | GTATCC | 1 cut(s) | 514 |
| BcnI | CCSGG | 1 cut(s) | 1151 |
| BcoDI | GTCTC | 4 cut(s) | 400, 706, 879, 1298 |
| BfaI | CTAG | 5 cut(s) | 117, 210, 252, 354, 1351 |
| BfmI | CTRYAG | 1 cut(s) | 144 |
| BfoI | RGCGCY | 1 cut(s) | 450 |
| BfuAI | ACCTGC | 1 cut(s) | 112 |
| BfuI | GTATCC | 1 cut(s) | 514 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 986 |
| BisI | GCNGC | 6 cut(s) | 6, 9, 94, 239, 990, 1085 |
| BlpI | GCTNAGC | 1 cut(s) | 933 |
| BlsI | GCNGC | 6 cut(s) | 7, 10, 95, 240, 991, 1086 |
| Bme1390I | CCNGG | 3 cut(s) | 1151, 1246, 1316 |
| Bme18I | GGWCC | 1 cut(s) | 361 |
| BmgT120I | GGNCC | 4 cut(s) | 134, 155, 361, 781 |
| BmiI | GGNNCC | 4 cut(s) | 263, 474, 1076, 1213 |
| BmrFI | CCNGG | 3 cut(s) | 1151, 1246, 1316 |
| BmrI | ACTGGG | 1 cut(s) | 530 |
| BmsI | GCATC | 5 cut(s) | 55, 118, 379, 763, 1158 |
| BmuI | ACTGGG | 1 cut(s) | 530 |
| BpiI | GAAGAC | 2 cut(s) | 99, 419 |
| BpmI | CTGGAG | 2 cut(s) | 876, 1091 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 933 |
| BpuMI | CCSGG | 1 cut(s) | 1151 |
| BsaI | GGTCTC | 1 cut(s) | 1298 |
| BsaJI | CCNNGG | 8 cut(s) | 552, 575, 602, 639, 1163, 1215, 1244, 1315 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 173, 257, 581, 821, 836, 1178, 1245 |
| Bse1I | ACTGG | 6 cut(s) | 178, 536, 792, 801, 1095, 1205 |
| Bse3DI | GCAATG | 1 cut(s) | 1254 |
| BseBI | CCWGG | 2 cut(s) | 1246, 1316 |
| BseDI | CCNNGG | 8 cut(s) | 552, 575, 602, 639, 1163, 1215, 1244, 1315 |
| BseGI | GGATG | 9 cut(s) | 70, 163, 522, 715, 740, 1173, 1239, 1325, 1341 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 173, 257, 581, 821, 836, 1178, 1245 |
| BseMI | GCAATG | 1 cut(s) | 1254 |
| BseMII | CTCAG | 4 cut(s) | 311, 662, 903, 947 |
| BseNI | ACTGG | 6 cut(s) | 178, 536, 792, 801, 1095, 1205 |
| BseSI | GKGCMC | 1 cut(s) | 867 |
| BseXI | GCAGC | 5 cut(s) | 20, 80, 225, 1001, 1071 |
| BseYI | CCCAGC | 2 cut(s) | 131, 326 |
| BsgI | GTGCAG | 1 cut(s) | 801 |
| BshFI | GGCC | 4 cut(s) | 136, 157, 782, 1238 |
| BshNI | GGYRCC | 2 cut(s) | 261, 1211 |
| BsiHKAI | GWGCWC | 2 cut(s) | 79, 1020 |
| BsiSI | CCGG | 1 cut(s) | 1151 |
| BslFI | GGGAC | 2 cut(s) | 775, 1170 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 173, 257, 581, 821, 836, 1178, 1245 |
| BsmAI | GTCTC | 4 cut(s) | 400, 706, 879, 1298 |
| BsmFI | GGGAC | 2 cut(s) | 775, 1170 |
| BsnI | GGCC | 4 cut(s) | 136, 157, 782, 1238 |
| Bso31I | GGTCTC | 1 cut(s) | 1298 |
| Bsp1286I | GDGCHC | 3 cut(s) | 79, 867, 1020 |
| Bsp143I | GATC | 1 cut(s) | 160 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 933 |
| Bsp19I | CCATGG | 2 cut(s) | 602, 1163 |
| BspACI | CCGC | 4 cut(s) | 5, 399, 610, 1192 |
| BspANI | GGCC | 4 cut(s) | 136, 157, 782, 1238 |
| BspCNI | CTCAG | 4 cut(s) | 312, 661, 904, 946 |
| BspLI | GGNNCC | 4 cut(s) | 263, 474, 1076, 1213 |
| BspMI | ACCTGC | 1 cut(s) | 112 |
| BspQI | GCTCTTC | 1 cut(s) | 1037 |
| BspT107I | GGYRCC | 2 cut(s) | 261, 1211 |
| BspTNI | GGTCTC | 1 cut(s) | 1298 |
| BsrDI | GCAATG | 1 cut(s) | 1254 |
| BsrI | ACTGG | 6 cut(s) | 178, 536, 792, 801, 1095, 1205 |
| BssECI | CCNNGG | 8 cut(s) | 552, 575, 602, 639, 1163, 1215, 1244, 1315 |
| BssMI | GATC | 1 cut(s) | 160 |
| BssSI | CACGAG | 1 cut(s) | 966 |
| BssT1I | CCWWGG | 6 cut(s) | 552, 575, 602, 639, 1163, 1215 |
| Bst2BI | CACGAG | 1 cut(s) | 966 |
| Bst2UI | CCWGG | 2 cut(s) | 1246, 1316 |
| Bst4CI | ACNGT | 4 cut(s) | 145, 288, 1144, 1327 |
| Bst6I | CTCTTC | 2 cut(s) | 483, 1037 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1265 |
| BstC8I | GCNNGC | 5 cut(s) | 91, 138, 999, 1173, 1306 |
| BstDEI | CTNAG | 4 cut(s) | 320, 648, 912, 933 |
| BstDSI | CCRYGG | 2 cut(s) | 602, 1163 |
| BstF5I | GGATG | 9 cut(s) | 70, 163, 522, 715, 740, 1173, 1239, 1325, 1341 |
| BstH2I | RGCGCY | 1 cut(s) | 450 |
| BstHHI | GCGC | 1 cut(s) | 449 |
| BstKTI | GATC | 1 cut(s) | 163 |
| BstMAI | GTCTC | 4 cut(s) | 400, 706, 879, 1298 |
| BstMBI | GATC | 1 cut(s) | 160 |
| BstNI | CCWGG | 2 cut(s) | 1246, 1316 |
| BstNSI | RCATGY | 1 cut(s) | 469 |
| BstSCI | CCNGG | 3 cut(s) | 1149, 1244, 1314 |
| BstSFI | CTRYAG | 1 cut(s) | 144 |
| BstSLI | GKGCMC | 1 cut(s) | 867 |
| BstV1I | GCAGC | 5 cut(s) | 20, 80, 225, 1001, 1071 |
| BstV2I | GAAGAC | 2 cut(s) | 99, 419 |
| BsuI | GTATCC | 1 cut(s) | 514 |
| BsuRI | GGCC | 4 cut(s) | 136, 157, 782, 1238 |
| BtgI | CCRYGG | 2 cut(s) | 602, 1163 |
| BtsCI | GGATG | 9 cut(s) | 70, 163, 522, 715, 740, 1173, 1239, 1325, 1341 |
| BtsI | GCAGTG | 1 cut(s) | 1076 |
| BtsIMutI | CAGTG | 5 cut(s) | 171, 317, 384, 1076, 1140 |
| BveI | ACCTGC | 1 cut(s) | 112 |
| Cac8I | GCNNGC | 5 cut(s) | 91, 138, 999, 1173, 1306 |
| CfoI | GCGC | 1 cut(s) | 449 |
| Cfr13I | GGNCC | 4 cut(s) | 134, 155, 361, 781 |
| Csp6I | GTAC | 1 cut(s) | 262 |
| CviAII | CATG | 6 cut(s) | 181, 310, 466, 603, 821, 1164 |
| CviQI | GTAC | 1 cut(s) | 262 |
| DdeI | CTNAG | 4 cut(s) | 320, 648, 912, 933 |
| DpnI | GATC | 1 cut(s) | 162 |
| DpnII | GATC | 1 cut(s) | 160 |
| EaeI | YGGCCR | 1 cut(s) | 1236 |
| Eam1104I | CTCTTC | 2 cut(s) | 483, 1037 |
| EarI | CTCTTC | 2 cut(s) | 483, 1037 |
| EciI | GGCGGA | 1 cut(s) | 625 |
| Ecl136II | GAGCTC | 1 cut(s) | 77 |
| Eco130I | CCWWGG | 6 cut(s) | 552, 575, 602, 639, 1163, 1215 |
| Eco24I | GRGCYC | 1 cut(s) | 79 |
| Eco31I | GGTCTC | 1 cut(s) | 1298 |
| Eco47I | GGWCC | 1 cut(s) | 361 |
| Eco53kI | GAGCTC | 1 cut(s) | 77 |
| EcoICRI | GAGCTC | 1 cut(s) | 77 |
| EcoRI | GAATTC | 1 cut(s) | 380 |
| EcoRII | CCWGG | 2 cut(s) | 1244, 1314 |
| EcoT14I | CCWWGG | 6 cut(s) | 552, 575, 602, 639, 1163, 1215 |
| EcoT38I | GRGCYC | 1 cut(s) | 79 |
| ErhI | CCWWGG | 6 cut(s) | 552, 575, 602, 639, 1163, 1215 |
| FaeI | CATG | 6 cut(s) | 184, 313, 469, 606, 824, 1167 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1019, 1051 |
| FaqI | GGGAC | 2 cut(s) | 775, 1170 |
| FatI | CATG | 6 cut(s) | 180, 309, 465, 602, 820, 1163 |
| FauNDI | CATATG | 2 cut(s) | 666, 721 |
| FblI | GTMKAC | 1 cut(s) | 214 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 9, 94, 239, 990, 1085 |
| FokI | GGATG | 9 cut(s) | 77, 150, 529, 702, 747, 1180, 1246, 1332, 1348 |
| FriOI | GRGCYC | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 9, 94, 239, 990, 1085 |
| FspBI | CTAG | 5 cut(s) | 117, 210, 252, 354, 1351 |
| GlaI | GCGC | 1 cut(s) | 448 |
| GluI | GCNGC | 6 cut(s) | 6, 9, 94, 239, 990, 1085 |
| GsaI | CCCAGC | 2 cut(s) | 135, 330 |
| GsuI | CTGGAG | 2 cut(s) | 876, 1091 |
| HaeII | RGCGCY | 1 cut(s) | 450 |
| HaeIII | GGCC | 4 cut(s) | 136, 157, 782, 1238 |
| HapII | CCGG | 1 cut(s) | 1151 |
| HhaI | GCGC | 1 cut(s) | 449 |
| Hin1II | CATG | 6 cut(s) | 184, 313, 469, 606, 824, 1167 |
| Hin6I | GCGC | 1 cut(s) | 447 |
| HinP1I | GCGC | 1 cut(s) | 447 |
| HindIII | AAGCTT | 1 cut(s) | 999 |
| HinfI | GANTC | 2 cut(s) | 196, 833 |
| HpaII | CCGG | 1 cut(s) | 1151 |
| HphI | GGTGA | 1 cut(s) | 929 |
| Hpy166II | GTNNAC | 2 cut(s) | 215, 364 |
| Hpy188I | TCNGA | 6 cut(s) | 195, 651, 742, 871, 884, 913 |
| Hpy188III | TCNNGA | 5 cut(s) | 334, 830, 837, 855, 1108 |
| Hpy8I | GTNNAC | 2 cut(s) | 215, 364 |
| HpyAV | CCTTC | 9 cut(s) | 146, 210, 487, 692, 772, 834, 854, 979, 1224 |
| HpyCH4III | ACNGT | 4 cut(s) | 145, 288, 1144, 1327 |
| HpyCH4IV | ACGT | 2 cut(s) | 701, 1262 |
| HpyCH4V | TGCA | 9 cut(s) | 140, 241, 247, 296, 392, 469, 818, 1087, 1259 |
| HpyF3I | CTNAG | 4 cut(s) | 320, 648, 912, 933 |
| HpySE526I | ACGT | 2 cut(s) | 701, 1262 |
| Hsp92II | CATG | 6 cut(s) | 184, 313, 469, 606, 824, 1167 |
| HspAI | GCGC | 1 cut(s) | 447 |
| KpnI | GGTACC | 1 cut(s) | 265 |
| Kzo9I | GATC | 1 cut(s) | 160 |
| LguI | GCTCTTC | 1 cut(s) | 1037 |
| LmnI | GCTCC | 2 cut(s) | 82, 1015 |
| Lsp1109I | GCAGC | 5 cut(s) | 20, 80, 225, 1001, 1071 |
| LweI | GCATC | 5 cut(s) | 55, 118, 379, 763, 1158 |
| MaeI | CTAG | 5 cut(s) | 117, 210, 252, 354, 1351 |
| MaeII | ACGT | 2 cut(s) | 701, 1262 |
| MaeIII | GTNAC | 2 cut(s) | 566, 1338 |
| MalI | GATC | 1 cut(s) | 162 |
| MboI | GATC | 1 cut(s) | 160 |
| MboII | GAAGA | 5 cut(s) | 99, 424, 470, 1024, 1027 |
| MfeI | CAATTG | 1 cut(s) | 1079 |
| MhlI | GDGCHC | 3 cut(s) | 79, 867, 1020 |
| MluCI | AATT | 3 cut(s) | 380, 629, 1079 |
| MmeI | TCCRAC | 1 cut(s) | 894 |
| MroXI | GAANNNNTTC | 1 cut(s) | 477 |
| MseI | TTAA | 4 cut(s) | 290, 660, 1026, 1113 |
| MslI | CAYNNNNRTG | 1 cut(s) | 720 |
| MspA1I | CMGCKG | 1 cut(s) | 401 |
| MspI | CCGG | 1 cut(s) | 1151 |
| MspR9I | CCNGG | 3 cut(s) | 1151, 1246, 1316 |
| MunI | CAATTG | 1 cut(s) | 1079 |
| MvaI | CCWGG | 2 cut(s) | 1246, 1316 |
| NciI | CCSGG | 1 cut(s) | 1151 |
| NcoI | CCATGG | 2 cut(s) | 602, 1163 |
| NdeI | CATATG | 2 cut(s) | 666, 721 |
| NdeII | GATC | 1 cut(s) | 160 |
| NlaIII | CATG | 6 cut(s) | 184, 313, 469, 606, 824, 1167 |
| NlaIV | GGNNCC | 4 cut(s) | 263, 474, 1076, 1213 |
| NmeAIII | GCCGAG | 1 cut(s) | 1006 |
| NmuCI | GTSAC | 1 cut(s) | 566 |
| NspI | RCATGY | 1 cut(s) | 469 |
| PciSI | GCTCTTC | 1 cut(s) | 1037 |
| PdmI | GAANNNNTTC | 1 cut(s) | 477 |
| PfeI | GAWTC | 2 cut(s) | 196, 833 |
| PfoI | TCCNGGA | 1 cut(s) | 1149 |
| PkrI | GCNGC | 6 cut(s) | 7, 10, 95, 240, 991, 1086 |
| Psp124BI | GAGCTC | 1 cut(s) | 79 |
| Psp6I | CCWGG | 2 cut(s) | 1244, 1314 |
| PspFI | CCCAGC | 2 cut(s) | 131, 326 |
| PspGI | CCWGG | 2 cut(s) | 1244, 1314 |
| PspN4I | GGNNCC | 4 cut(s) | 263, 474, 1076, 1213 |
| PspPI | GGNCC | 4 cut(s) | 134, 155, 361, 781 |
| RsaI | GTAC | 1 cut(s) | 263 |
| RsaNI | GTAC | 1 cut(s) | 262 |
| RseI | CAYNNNNRTG | 1 cut(s) | 720 |
| SacI | GAGCTC | 1 cut(s) | 79 |
| SapI | GCTCTTC | 1 cut(s) | 1037 |
| SaqAI | TTAA | 4 cut(s) | 290, 660, 1026, 1113 |
| SatI | GCNGC | 6 cut(s) | 6, 9, 94, 239, 990, 1085 |
| Sau3AI | GATC | 1 cut(s) | 160 |
| Sau96I | GGNCC | 4 cut(s) | 134, 155, 361, 781 |
| ScrFI | CCNGG | 3 cut(s) | 1151, 1246, 1316 |
| SduI | GDGCHC | 3 cut(s) | 79, 867, 1020 |
| SfaNI | GCATC | 5 cut(s) | 55, 118, 379, 763, 1158 |
| SfcI | CTRYAG | 1 cut(s) | 144 |
| SinI | GGWCC | 1 cut(s) | 361 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 720 |
| Sse9I | AATT | 3 cut(s) | 380, 629, 1079 |
| SsiI | CCGC | 4 cut(s) | 5, 399, 610, 1192 |
| SspMI | CTAG | 5 cut(s) | 117, 210, 252, 354, 1351 |
| SstI | GAGCTC | 1 cut(s) | 79 |
| StyD4I | CCNGG | 3 cut(s) | 1149, 1244, 1314 |
| StyI | CCWWGG | 6 cut(s) | 552, 575, 602, 639, 1163, 1215 |
| TaaI | ACNGT | 4 cut(s) | 145, 288, 1144, 1327 |
| TaiI | ACGT | 2 cut(s) | 704, 1265 |
| TaqI | TCGA | 1 cut(s) | 110 |
| TaqII | GACCGA | 1 cut(s) | 1280 |
| TasI | AATT | 3 cut(s) | 380, 629, 1079 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TfiI | GAWTC | 2 cut(s) | 196, 833 |
| Tru1I | TTAA | 4 cut(s) | 290, 660, 1026, 1113 |
| Tru9I | TTAA | 4 cut(s) | 290, 660, 1026, 1113 |
| TscAI | CASTG | 5 cut(s) | 178, 324, 391, 1076, 1147 |
| TseFI | GTSAC | 1 cut(s) | 566 |
| TseI | GCWGC | 5 cut(s) | 8, 93, 238, 989, 1084 |
| Tsp45I | GTSAC | 1 cut(s) | 566 |
| TspDTI | ATGAA | 6 cut(s) | 169, 192, 425, 506, 519, 642 |
| TspGWI | ACGGA | 1 cut(s) | 908 |
| TspRI | CASTG | 5 cut(s) | 178, 324, 391, 1076, 1147 |
| VpaK11BI | GGWCC | 1 cut(s) | 361 |
| XapI | RAATTY | 1 cut(s) | 380 |
| XceI | RCATGY | 1 cut(s) | 469 |
| XmiI | GTMKAC | 1 cut(s) | 214 |
| XmnI | GAANNNNTTC | 1 cut(s) | 477 |
| XspI | CTAG | 5 cut(s) | 117, 210, 252, 354, 1351 |