Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002439

Physical Location & Seq

Genomic Coordinates Reverse (-)

7115199 .. 7118545

Gene Structure 3347 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1089500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGCCATCGCCGCAGCAAGTTTTAATCTTCCTAGTCTCCAAACTCACCCTCTCCTTCGACAGCCCCATTTTGGGCGTTGCCCTAGGGTATGCCGCCGTGCGCACCTTGCTCAAATTGAGCTCCTACTCCTCGGTCCTACCCAAGGTCCGTATCGCTCCCTCCGTAAAAATTTCTGATCTCCGGTCAAGCCTCGCGTTTGATCAATCCGACCAGTCCACTGCAAAGCTCGCTGTCTTCCGTGGCACCGTTGAAGCCAAGTCTGCCTTGGACGACAGCAAATGGAATATCTTTAAAAAGTCTGATGTACTCGTCTCTCGAGGAACAATAGATAGAGCCGTCATTGTTTGGAGAACTCAAACGTGTGTATTTAACGAATGGATGGGCCTTTTCGGATGGTGGGATTTTCGAGCGTATTGGAGAGCACTTTGGAGAGCTTTGACAGATCCAGGATCAAGCTCCTTACAAATGGTTCCTTTCATTCTTGTTGAAGGCGGTGGTCGCGGAAAAAAACCGATTTCCGATTTTGTTGTTGTAAATGTGCATAGATCAAGGCAGCTGTTACCTCTCACTACAGTTTATCAACGCTTGCACCCTGTTATCGCTCCTCCTTCTCCCATTTCATTCTTCGAGGCACTTTATGGCCGTGACGAGTGCCAAGGTGGAGTGCTCGAGGAAGAGGAGATTCTTCGTTTGGGAAAGGAAATTAGTGCTATTGGTCTCTACAGTTTCAAAAACGGAGTGCTGGAAGTCAAGTCCTGCAATGATCTTCCCTATTTTCTCTCTGGGATGTCTAAGGAACAGATGGTTGTAGATCTTGCATTACGTACAAAAAAATTGTTCCGGAGTGGTATTGTTCTTGGTTCAATGTCAATTGGCCTCCTTGGCTATTCTGCTGTCAGGATTTGGAATAGATGGAAAGCGTGGAAGCAACAAAGGCAGCTACAGCAATCAATCCGTGCTTCTGAGAACAAAGCTGAAACTCAAGTTCAAGAAGTGGATGCAGAGGATGATGTTCCAAGGCATCAGCTGTGTGCCGTCTGTCTTACGAGTAGAAGGCAGAACGCATTCCTTCCTTGTGGGCATCTGCTTTGTTGCCAACCATGTAGTGTACTGATGAAAAATCACGTTTCACCGAAGTGCCCTCTTTGTCGGAAGGAAATTCTAGTTTTGGTACGAATATATGAATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0001558 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005777 GO:0006464 GO:0006807 GO:0006919 GO:0006996 GO:0007005 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009893 GO:0009941 GO:0009966 GO:0009967 GO:0009987 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0016020 GO:0016021 GO:0016043 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019867 GO:0023051 GO:0023056 GO:0030162 GO:0030308 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031323 GO:0031325 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032268 GO:0032270 GO:0032446 GO:0032592 GO:0036211 GO:0040008 GO:0042579 GO:0042802 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043085 GO:0043122 GO:0043123 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043280 GO:0043281 GO:0043412 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045862 GO:0045926 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051646 GO:0052547 GO:0052548 GO:0060255 GO:0065007 GO:0065009 GO:0070647 GO:0071704 GO:0071840 GO:0080090 GO:0098573 GO:0098588 GO:0098805 GO:0140096 GO:1901564 GO:1902531 GO:1902533 GO:2000116 GO:2001056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GIDE zf-C3HC4_3

Protein Analysis

397

Amino Acids

44.5

Weight (kDa)

9.38

Isoelectric Point (pI)

54.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIDE	PF12483	143 - 294	3.9e-23	E3 Ubiquitin ligase
zf-C3HC4_3	PF13920	341 - 387	1.8e-10	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54150 AT1G54150
fragaria_vesca	FvH4_6g34790
malus_domestica	MD02G1089500.v1.1 MD09G1182600.v1.1 MD09G1182700.v1.1 MD09G1182800.v1.1
prunus_persica	Prupe.3G040200_v2.0.a1
pyrus_communis	pycom02g07150 pycom09g09990 pycom09g10000 pycom09g10010 pycom09g10020 pycom10g20170 pycom10g20200
rosa_chinensis	RchiOBHm_Chr2g0145651
rosa_laevigata	RLG00000012894 RLG00000012896 RLG00000020156
rosa_multiflora	Rmu_co8485045.1_g000001 Rmu_sc0000227.1_g000002 Rmu_sc0003046.1_g000004 Rmu_sc0006544.1_g000002 Rmu_sc0009650.1_g000008 Rmu_sc0024073.1_g000001 Rmu_sc0027050.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434660 Rroxscaffold_2G00100580 Rroxscaffold_7G00191020
rosa_rugosa	Rorug02G0392400
rosa_samantha	Rh2AG197700 Rh2AG446800 Rh2BG416100 Rh2BG458500 Rh2CG433500 Rh2DG205400 Rh2DG468100 Rh4AG042900 Rh4CG045900 Rh6AG435700
rosa_wichuraiana	Rw2G036490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	101
AccB1I	GGYRCC	1 cut(s)	242
AccII	CGCG	2 cut(s)	194, 501
AccIII	TCCGGA	1 cut(s)	840
AciI	CCGC	4 cut(s)	11, 93, 492, 501
AclWI	GGATC	2 cut(s)	437, 457
AcoI	YGGCCR	1 cut(s)	640
AcsI	RAATTY	2 cut(s)	168, 1158
AfaI	GTAC	4 cut(s)	306, 826, 1110, 1173
AfiI	CCNNNNNNNGG	3 cut(s)	70, 71, 142
AflIII	ACRYGT	1 cut(s)	359
AgsI	TTSAA	5 cut(s)	251, 488, 730, 864, 989
AjnI	CCWGG	1 cut(s)	445
AleI	CACNNNNGTG	1 cut(s)	1135
AluBI	AGCT	8 cut(s)	120, 226, 434, 456, 556, 940, 974, 1027
AluI	AGCT	8 cut(s)	120, 226, 434, 456, 556, 940, 974, 1027
Alw21I	GWGCWC	3 cut(s)	122, 424, 669
Alw26I	GTCTC	3 cut(s)	40, 316, 722
AlwI	GGATC	2 cut(s)	437, 457
Ama87I	CYCGRG	2 cut(s)	315, 668
Aor13HI	TCCGGA	1 cut(s)	840
AoxI	GGCC	3 cut(s)	382, 640, 874
ApeKI	GCWGC	3 cut(s)	13, 553, 937
ApoI	RAATTY	2 cut(s)	168, 1158
Asp700I	GAANNNNTTC	1 cut(s)	1064
AspA2I	CCTAGG	1 cut(s)	82
AspLEI	GCGC	1 cut(s)	102
AspS9I	GGNCC	3 cut(s)	133, 145, 382
AsuHPI	GGTGA	2 cut(s)	37, 1122
AvaI	CYCGRG	2 cut(s)	315, 668
AvaII	GGWCC	2 cut(s)	133, 145
AvrII	CCTAGG	1 cut(s)	82
BaeGI	GKGCMC	1 cut(s)	1142
BanI	GGYRCC	1 cut(s)	242
BanII	GRGCYC	1 cut(s)	122
BbsI	GAAGAC	1 cut(s)	226
Bbv12I	GWGCWC	3 cut(s)	122, 424, 669
BbvI	GCAGC	3 cut(s)	25, 565, 949
BccI	CCATC	5 cut(s)	13, 373, 387, 796, 906
BceAI	ACGGC	4 cut(s)	80, 320, 627, 1019
BciT130I	CCWGG	1 cut(s)	447
BclI	TGATCA	1 cut(s)	199
BcoDI	GTCTC	3 cut(s)	40, 316, 722
BfaI	CTAG	3 cut(s)	32, 83, 1163
BfmI	CTRYAG	3 cut(s)	570, 721, 941
BglI	GCCNNNNNGGC	1 cut(s)	882
BglII	AGATCT	1 cut(s)	811
BisI	GCNGC	5 cut(s)	11, 14, 93, 554, 938
BlnI	CCTAGG	1 cut(s)	82
BlsI	GCNGC	5 cut(s)	12, 15, 94, 555, 939
Bme1390I	CCNGG	1 cut(s)	447
Bme18I	GGWCC	2 cut(s)	133, 145
BmeT110I	CYCGRG	2 cut(s)	315, 668
BmgT120I	GGNCC	3 cut(s)	133, 145, 382
BmiI	GGNNCC	2 cut(s)	244, 471
BmrFI	CCNGG	1 cut(s)	447
BmsI	GCATC	3 cut(s)	988, 1030, 1090
BpiI	GAAGAC	1 cut(s)	226
BpuEI	CTTGAG	1 cut(s)	966
BsaAI	YACGTR	1 cut(s)	824
BsaI	GGTCTC	1 cut(s)	722
BsaJI	CCNNGG	8 cut(s)	82, 129, 141, 238, 264, 655, 880, 1016
BsaWI	WCCGGW	2 cut(s)	180, 840
Bsc4I	CCNNNNNNNGG	3 cut(s)	70, 71, 142
Bse1I	ACTGG	1 cut(s)	211
Bse3DI	GCAATG	1 cut(s)	766
BseAI	TCCGGA	1 cut(s)	840
BseBI	CCWGG	1 cut(s)	447
BseDI	CCNNGG	8 cut(s)	82, 129, 141, 238, 264, 655, 880, 1016
BseGI	GGATG	5 cut(s)	384, 398, 792, 1003, 1012
BseLI	CCNNNNNNNGG	3 cut(s)	70, 71, 142
BseMI	GCAATG	1 cut(s)	766
BseMII	CTCAG	1 cut(s)	954
BseNI	ACTGG	1 cut(s)	211
BseRI	GAGGAG	3 cut(s)	118, 594, 692
BseSI	GKGCMC	1 cut(s)	1142
BseXI	GCAGC	3 cut(s)	25, 565, 949
Bsh1236I	CGCG	2 cut(s)	194, 501
BshFI	GGCC	3 cut(s)	384, 642, 876
BshNI	GGYRCC	1 cut(s)	242
BsiHKAI	GWGCWC	3 cut(s)	122, 424, 669
BsiHKCI	CYCGRG	2 cut(s)	315, 668
BsiSI	CCGG	2 cut(s)	181, 841
BslI	CCNNNNNNNGG	3 cut(s)	70, 71, 142
BsmAI	GTCTC	3 cut(s)	40, 316, 722
BsmBI	CGTCTC	1 cut(s)	316
BsmI	GAATGC	1 cut(s)	1064
BsnI	GGCC	3 cut(s)	384, 642, 876
Bso31I	GGTCTC	1 cut(s)	722
BsoBI	CYCGRG	2 cut(s)	315, 668
Bsp1286I	GDGCHC	4 cut(s)	122, 424, 669, 1142
Bsp13I	TCCGGA	1 cut(s)	840
Bsp143I	GATC	7 cut(s)	175, 199, 442, 449, 545, 763, 811
BspACI	CCGC	4 cut(s)	11, 93, 492, 501
BspANI	GGCC	3 cut(s)	384, 642, 876
BspCNI	CTCAG	1 cut(s)	955
BspEI	TCCGGA	1 cut(s)	840
BspFNI	CGCG	2 cut(s)	194, 501
BspLI	GGNNCC	2 cut(s)	244, 471
BspPI	GGATC	2 cut(s)	437, 457
BspT107I	GGYRCC	1 cut(s)	242
BspTNI	GGTCTC	1 cut(s)	722
BsrDI	GCAATG	1 cut(s)	766
BsrI	ACTGG	1 cut(s)	211
BssECI	CCNNGG	8 cut(s)	82, 129, 141, 238, 264, 655, 880, 1016
BssMI	GATC	7 cut(s)	175, 199, 442, 449, 545, 763, 811
BssT1I	CCWWGG	6 cut(s)	82, 141, 264, 655, 880, 1016
Bst2UI	CCWGG	1 cut(s)	447
Bst4CI	ACNGT	3 cut(s)	247, 574, 725
Bst6I	CTCTTC	1 cut(s)	669
BstBAI	YACGTR	1 cut(s)	824
BstC8I	GCNNGC	2 cut(s)	228, 587
BstDEI	CTNAG	3 cut(s)	792, 963, 1188
BstDSI	CCRYGG	1 cut(s)	238
BstENI	CCTNNNNNAGG	1 cut(s)	140
BstF5I	GGATG	5 cut(s)	384, 398, 792, 1003, 1012
BstFNI	CGCG	2 cut(s)	194, 501
BstHHI	GCGC	1 cut(s)	102
BstKTI	GATC	7 cut(s)	178, 202, 445, 452, 548, 766, 814
BstMAI	GTCTC	3 cut(s)	40, 316, 722
BstMBI	GATC	7 cut(s)	175, 199, 442, 449, 545, 763, 811
BstMWI	GCNNNNNNNGC	8 cut(s)	10, 106, 227, 260, 498, 882, 934, 943
BstNI	CCWGG	1 cut(s)	447
BstSCI	CCNGG	1 cut(s)	445
BstSFI	CTRYAG	3 cut(s)	570, 721, 941
BstSLI	GKGCMC	1 cut(s)	1142
BstSNI	TACGTA	1 cut(s)	824
BstUI	CGCG	2 cut(s)	194, 501
BstV1I	GCAGC	3 cut(s)	25, 565, 949
BstV2I	GAAGAC	1 cut(s)	226
BstX2I	RGATCY	2 cut(s)	442, 811
BstYI	RGATCY	2 cut(s)	442, 811
BsuRI	GGCC	3 cut(s)	384, 642, 876
BtgI	CCRYGG	1 cut(s)	238
BtsCI	GGATG	5 cut(s)	384, 398, 792, 1003, 1012
BtsI	GCAGTG	1 cut(s)	216
BtsIMutI	CAGTG	1 cut(s)	216
Cac8I	GCNNGC	2 cut(s)	228, 587
CfoI	GCGC	1 cut(s)	102
Cfr13I	GGNCC	3 cut(s)	133, 145, 382
Csp6I	GTAC	4 cut(s)	305, 825, 1109, 1172
CviAII	CATG	1 cut(s)	1101
CviQI	GTAC	4 cut(s)	305, 825, 1109, 1172
DdeI	CTNAG	3 cut(s)	792, 963, 1188
DpnI	GATC	7 cut(s)	177, 201, 444, 451, 547, 765, 813
DpnII	GATC	7 cut(s)	175, 199, 442, 449, 545, 763, 811
DraI	TTTAAA	1 cut(s)	292
EaeI	YGGCCR	1 cut(s)	640
Eam1104I	CTCTTC	1 cut(s)	669
EarI	CTCTTC	1 cut(s)	669
Ecl136II	GAGCTC	1 cut(s)	120
Eco105I	TACGTA	1 cut(s)	824
Eco130I	CCWWGG	6 cut(s)	82, 141, 264, 655, 880, 1016
Eco24I	GRGCYC	1 cut(s)	122
Eco31I	GGTCTC	1 cut(s)	722
Eco47I	GGWCC	2 cut(s)	133, 145
Eco53kI	GAGCTC	1 cut(s)	120
Eco88I	CYCGRG	2 cut(s)	315, 668
EcoICRI	GAGCTC	1 cut(s)	120
EcoNI	CCTNNNNNAGG	1 cut(s)	140
EcoRII	CCWGG	1 cut(s)	445
EcoT14I	CCWWGG	6 cut(s)	82, 141, 264, 655, 880, 1016
EcoT38I	GRGCYC	1 cut(s)	122
ErhI	CCWWGG	6 cut(s)	82, 141, 264, 655, 880, 1016
Esp3I	CGTCTC	1 cut(s)	316
FaeI	CATG	1 cut(s)	1104
FaiI	YATR	6 cut(s)	90, 543, 639, 1102, 1180, 1182
FalI	AAGNNNNNCTT	2 cut(s)	248, 280
FatI	CATG	1 cut(s)	1100
FbaI	TGATCA	1 cut(s)	199
Fnu4HI	GCNGC	5 cut(s)	11, 14, 93, 554, 938
FokI	GGATG	5 cut(s)	391, 405, 799, 1010, 1019
FriOI	GRGCYC	1 cut(s)	122
Fsp4HI	GCNGC	5 cut(s)	11, 14, 93, 554, 938
FspAI	RTGCGCAY	1 cut(s)	101
FspBI	CTAG	3 cut(s)	32, 83, 1163
FspI	TGCGCA	1 cut(s)	101
GlaI	GCGC	1 cut(s)	101
GluI	GCNGC	5 cut(s)	11, 14, 93, 554, 938
HaeIII	GGCC	3 cut(s)	384, 642, 876
HapII	CCGG	2 cut(s)	181, 841
HhaI	GCGC	1 cut(s)	102
Hin1II	CATG	1 cut(s)	1104
Hin6I	GCGC	1 cut(s)	100
HinP1I	GCGC	1 cut(s)	100
HinfI	GANTC	2 cut(s)	682, 1184
HpaII	CCGG	2 cut(s)	181, 841
HphI	GGTGA	2 cut(s)	37, 1122
Hpy166II	GTNNAC	2 cut(s)	216, 1109
Hpy188I	TCNGA	7 cut(s)	175, 208, 301, 392, 520, 964, 1152
Hpy188III	TCNNGA	4 cut(s)	315, 841, 898, 989
Hpy8I	GTNNAC	2 cut(s)	216, 1109
HpyAV	CCTTC	6 cut(s)	64, 482, 618, 1047, 1079, 1147
HpyCH4III	ACNGT	3 cut(s)	247, 574, 725
HpyCH4IV	ACGT	3 cut(s)	359, 823, 1125
HpyCH4V	TGCA	6 cut(s)	221, 541, 589, 759, 818, 1001
HpyF10VI	GCNNNNNNNGC	8 cut(s)	10, 106, 227, 260, 498, 882, 934, 943
HpyF3I	CTNAG	3 cut(s)	792, 963, 1188
HpySE526I	ACGT	3 cut(s)	359, 823, 1125
Hsp92II	CATG	1 cut(s)	1104
HspAI	GCGC	1 cut(s)	100
Kpn2I	TCCGGA	1 cut(s)	840
Ksp22I	TGATCA	1 cut(s)	199
Kzo9I	GATC	7 cut(s)	175, 199, 442, 449, 545, 763, 811
LmnI	GCTCC	4 cut(s)	125, 160, 461, 607
Lsp1109I	GCAGC	3 cut(s)	25, 565, 949
LweI	GCATC	3 cut(s)	988, 1030, 1090
MaeI	CTAG	3 cut(s)	32, 83, 1163
MaeII	ACGT	3 cut(s)	359, 823, 1125
MaeIII	GTNAC	2 cut(s)	558, 644
MalI	GATC	7 cut(s)	177, 201, 444, 451, 547, 765, 813
MboI	GATC	7 cut(s)	175, 199, 442, 449, 545, 763, 811
MboII	GAAGA	6 cut(s)	19, 226, 616, 677, 686, 758
MfeI	CAATTG	1 cut(s)	870
MflI	RGATCY	2 cut(s)	442, 811
MhlI	GDGCHC	4 cut(s)	122, 424, 669, 1142
MluCI	AATT	6 cut(s)	113, 168, 702, 833, 870, 1158
MmeI	TCCRAC	2 cut(s)	231, 1130
MroI	TCCGGA	1 cut(s)	840
MroXI	GAANNNNTTC	1 cut(s)	1064
MseI	TTAA	3 cut(s)	23, 291, 369
MslI	CAYNNNNRTG	1 cut(s)	1135
MspA1I	CMGCKG	2 cut(s)	556, 1027
MspI	CCGG	2 cut(s)	181, 841
MspR9I	CCNGG	1 cut(s)	447
MunI	CAATTG	1 cut(s)	870
Mva1269I	GAATGC	1 cut(s)	1064
MvaI	CCWGG	1 cut(s)	447
MvnI	CGCG	2 cut(s)	194, 501
MwoI	GCNNNNNNNGC	8 cut(s)	10, 106, 227, 260, 498, 882, 934, 943
NdeII	GATC	7 cut(s)	175, 199, 442, 449, 545, 763, 811
NlaIII	CATG	1 cut(s)	1104
NlaIV	GGNNCC	2 cut(s)	244, 471
NmuCI	GTSAC	1 cut(s)	644
NsbI	TGCGCA	1 cut(s)	101
OliI	CACNNNNGTG	1 cut(s)	1135
PaeR7I	CTCGAG	2 cut(s)	315, 668
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PctI	GAATGC	1 cut(s)	1064
PdmI	GAANNNNTTC	1 cut(s)	1064
PfeI	GAWTC	2 cut(s)	682, 1184
PfoI	TCCNGGA	1 cut(s)	445
PkrI	GCNGC	5 cut(s)	12, 15, 94, 555, 939
Ppu21I	YACGTR	1 cut(s)	824
Psp124BI	GAGCTC	1 cut(s)	122
Psp6I	CCWGG	1 cut(s)	445
PspGI	CCWGG	1 cut(s)	445
PspN4I	GGNNCC	2 cut(s)	244, 471
PspPI	GGNCC	3 cut(s)	133, 145, 382
PspXI	VCTCGAGB	1 cut(s)	668
PsuI	RGATCY	2 cut(s)	442, 811
PvuII	CAGCTG	2 cut(s)	556, 1027
RsaI	GTAC	4 cut(s)	306, 826, 1110, 1173
RsaNI	GTAC	4 cut(s)	305, 825, 1109, 1172
RseI	CAYNNNNRTG	1 cut(s)	1135
SacI	GAGCTC	1 cut(s)	122
SaqAI	TTAA	3 cut(s)	23, 291, 369
SatI	GCNGC	5 cut(s)	11, 14, 93, 554, 938
Sau3AI	GATC	7 cut(s)	175, 199, 442, 449, 545, 763, 811
Sau96I	GGNCC	3 cut(s)	133, 145, 382
ScrFI	CCNGG	1 cut(s)	447
SduI	GDGCHC	4 cut(s)	122, 424, 669, 1142
SfaNI	GCATC	3 cut(s)	988, 1030, 1090
SfcI	CTRYAG	3 cut(s)	570, 721, 941
Sfr274I	CTCGAG	2 cut(s)	315, 668
SinI	GGWCC	2 cut(s)	133, 145
SlaI	CTCGAG	2 cut(s)	315, 668
SmiMI	CAYNNNNRTG	1 cut(s)	1135
SmlI	CTYRAG	3 cut(s)	315, 668, 981
SmoI	CTYRAG	3 cut(s)	315, 668, 981
SnaBI	TACGTA	1 cut(s)	824
Sse9I	AATT	6 cut(s)	113, 168, 702, 833, 870, 1158
SsiI	CCGC	4 cut(s)	11, 93, 492, 501
SspMI	CTAG	3 cut(s)	32, 83, 1163
SstI	GAGCTC	1 cut(s)	122
StyD4I	CCNGG	1 cut(s)	445
StyI	CCWWGG	6 cut(s)	82, 141, 264, 655, 880, 1016
TaaI	ACNGT	3 cut(s)	247, 574, 725
TaiI	ACGT	3 cut(s)	362, 826, 1128
TaqI	TCGA	5 cut(s)	57, 316, 406, 627, 669
TaqII	GACCGA	1 cut(s)	121
TasI	AATT	6 cut(s)	113, 168, 702, 833, 870, 1158
TatI	WGTACW	2 cut(s)	304, 1108
TauI	GCSGC	2 cut(s)	13, 95
TfiI	GAWTC	2 cut(s)	682, 1184
Tru1I	TTAA	3 cut(s)	23, 291, 369
Tru9I	TTAA	3 cut(s)	23, 291, 369
TscAI	CASTG	1 cut(s)	223
TseFI	GTSAC	1 cut(s)	644
TseI	GCWGC	3 cut(s)	13, 553, 937
Tsp45I	GTSAC	1 cut(s)	644
TspDTI	ATGAA	3 cut(s)	466, 609, 1130
TspGWI	ACGGA	5 cut(s)	137, 151, 227, 750, 944
TspRI	CASTG	1 cut(s)	223
VpaK11BI	GGWCC	2 cut(s)	133, 145
XagI	CCTNNNNNAGG	1 cut(s)	140
XapI	RAATTY	2 cut(s)	168, 1158
XcmI	CCANNNNNNNNNTGG	1 cut(s)	262
XhoI	CTCGAG	2 cut(s)	315, 668
XmaJI	CCTAGG	1 cut(s)	82
XmnI	GAANNNNTTC	1 cut(s)	1064
XspI	CTAG	3 cut(s)	32, 83, 1163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.