Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002439

Physical Location & Seq

Genomic Coordinates Forward (+)

15723181 .. 15726353

Gene Structure 3173 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1182600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1152 bp

ATGTCGTCGCCAGTTCCAGACAATGTCTTCGTCTCCCAACTCTCCCGATTCGTCCTCTCCTGGGACGGCGCCGTTCTGGGCGTCTCCCTAGCTTGCGCCGCCGTGCACTCCGTCCTCAATTTCACCTCCACCTCCTCATCCCTAAGCAAGCTCCGTGATGCCCCCGCCGTCAAAGTCTCCGATCTCCGCTCAATCCTCCCCCTCGATCAATCCGACAAGCTCGTCGTTGTACGCGGCACCGTCGAAGCCAAGTCCGCCGTCGACGGCACGTGGACGGGCCTCCAGTCCGGCGTACTCGTCTCTAAAGAAACAAATCACAGAGCCGTCATCGTTGACAGTACCAAAACGTGTATAGTTCAGGAGTGGAAGGGCTTAATCGGATGGTCGTCTGATTTGAGAGCGATAATTTGGAGGTATTGGAGAGAGCACGAATCGAATTTGGTCAGAAAGGTTCCTTTCGTTCTTGTTGATGGTGATCAATGGCCGATTCGGGATATTGTGGTTGTGAATGTGGAAGGATCAAGGCATCCTTTACCTCTTACGATAGCTTATCATCATTTGCAACCTGTACATGCTTCTCCCTATTCTTTCTTGGAAGCACTTTTTGGCACTAACTACCCTGTTGCTTTCCTCAATGTTGAGAAGATTCTTCCGGTGGGAAAGGAGATTAGTGCTGTAGGTCTCTGCAGTTTGAGAAATGGAGTCCCGGAAATCAAGTCCTGCAAGGATCTTCCCTATTTTCTCTCTGAGATGTCTAAGGACGAGATGGTTGCAGATCTTGCATCACGTGCAAGAATGCTGTTCTGGGTTGGGATTGTTCTTGGTTCAATGTCAATTGGAGTCCTTGGCTATGCTGTTGTGAGGAATTGGAATAGATGGAAAGTGGAGAGGCAACAACGGCAGTTACAGCAATCAAGCCGGGATGCTGACAGCAATGCGGAAGCTCAAATTGAAGACGAGGATGCAGGAGATGTTCCAGAGGGGCAGTTTTGTGTCATATGTCTGACGAGGAGAAGGCGGTCAGCATTCATTCCTTGCGGGCATCGAGTTTGTTGCCACCCCTGCAGCATATCAATCGAACGGGACATAGCACCGAAGTGTCCTGTTTGTCGGCAGGAGATCCGCACTTCACTGCGAATATATGATTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0001558 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005777 GO:0006464 GO:0006807 GO:0006919 GO:0006996 GO:0007005 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009893 GO:0009941 GO:0009966 GO:0009967 GO:0009987 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0016020 GO:0016021 GO:0016043 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019867 GO:0023051 GO:0023056 GO:0030162 GO:0030308 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031323 GO:0031325 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032268 GO:0032270 GO:0032446 GO:0032592 GO:0036211 GO:0040008 GO:0042579 GO:0042802 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043085 GO:0043122 GO:0043123 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043280 GO:0043281 GO:0043412 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045862 GO:0045926 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051646 GO:0052547 GO:0052548 GO:0060255 GO:0065007 GO:0065009 GO:0070647 GO:0071704 GO:0071840 GO:0080090 GO:0098573 GO:0098588 GO:0098805 GO:0140096 GO:1901564 GO:1902531 GO:1902533 GO:2000116 GO:2001056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GIDE zf-C3HC4_3

Protein Analysis

384

Amino Acids

42.61

Weight (kDa)

7.96

Isoelectric Point (pI)

54.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIDE	PF12483	134 - 282	3.8e-35	E3 Ubiquitin ligase
zf-C3HC4_3	PF13920	328 - 376	7.6e-13	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54150 AT1G54150
fragaria_vesca	FvH4_6g34790
malus_domestica	MD02G1089500.v1.1 MD09G1182600.v1.1 MD09G1182700.v1.1 MD09G1182800.v1.1
prunus_persica	Prupe.3G040200_v2.0.a1
pyrus_communis	pycom02g07150 pycom09g09990 pycom09g10000 pycom09g10010 pycom09g10020 pycom10g20170 pycom10g20200
rosa_chinensis	RchiOBHm_Chr2g0145651
rosa_laevigata	RLG00000012894 RLG00000012896 RLG00000020156
rosa_multiflora	Rmu_co8485045.1_g000001 Rmu_sc0000227.1_g000002 Rmu_sc0003046.1_g000004 Rmu_sc0006544.1_g000002 Rmu_sc0009650.1_g000008 Rmu_sc0024073.1_g000001 Rmu_sc0027050.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434660 Rroxscaffold_2G00100580 Rroxscaffold_7G00191020
rosa_rugosa	Rorug02G0392400
rosa_samantha	Rh2AG197700 Rh2AG446800 Rh2BG416100 Rh2BG458500 Rh2CG433500 Rh2DG205400 Rh2DG468100 Rh4AG042900 Rh4CG045900 Rh6AG435700
rosa_wichuraiana	Rw2G036490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	221
AccB1I	GGYRCC	2 cut(s)	68, 236
AccBSI	CCGCTC	1 cut(s)	189
AccI	GTMKAC	1 cut(s)	261
AccII	CGCG	1 cut(s)	234
AciI	CCGC	9 cut(s)	99, 165, 187, 234, 255, 938, 1018, 1038, 1123
AclWI	GGATC	3 cut(s)	526, 735, 1114
AcoI	YGGCCR	1 cut(s)	482
AcsI	RAATTY	1 cut(s)	436
AcvI	CACGTG	2 cut(s)	270, 788
AcyI	GRCGYC	2 cut(s)	69, 81
AfaI	GTAC	4 cut(s)	231, 294, 340, 570
AfiI	CCNNNNNNNGG	1 cut(s)	61
AflIII	ACRYGT	1 cut(s)	347
AgsI	TTSAA	2 cut(s)	828, 953
AjnI	CCWGG	1 cut(s)	59
AjuI	GAANNNNNNNTTGG	2 cut(s)	588, 620
AleI	CACNNNNGTG	1 cut(s)	1096
AluBI	AGCT	5 cut(s)	92, 151, 220, 548, 944
AluI	AGCT	5 cut(s)	92, 151, 220, 548, 944
Alw21I	GWGCWC	2 cut(s)	108, 429
Alw26I	GTCTC	5 cut(s)	37, 88, 181, 304, 686
Alw44I	GTGCAC	1 cut(s)	104
AlwI	GGATC	3 cut(s)	526, 735, 1114
AoxI	GGCC	2 cut(s)	277, 482
ApaLI	GTGCAC	1 cut(s)	104
ApeKI	GCWGC	1 cut(s)	1065
ApoI	RAATTY	1 cut(s)	436
ArsI	GACNNNNNNTTYG	2 cut(s)	11, 43
AspLEI	GCGC	2 cut(s)	71, 98
AspS9I	GGNCC	1 cut(s)	277
AsuC2I	CCSGG	2 cut(s)	707, 920
AsuHPI	GGTGA	2 cut(s)	115, 485
BaeGI	GKGCMC	1 cut(s)	108
BanI	GGYRCC	2 cut(s)	68, 236
BbrPI	CACGTG	2 cut(s)	270, 788
BbsI	GAAGAC	2 cut(s)	19, 960
Bbv12I	GWGCWC	2 cut(s)	108, 429
BbvI	GCAGC	1 cut(s)	1077
BccI	CCATC	4 cut(s)	375, 464, 760, 870
BceAI	ACGGC	8 cut(s)	56, 82, 86, 152, 242, 280, 308, 914
BcgI	CGANNNNNNTGC	6 cut(s)	752, 786, 1035, 1057, 1069, 1091
BciT130I	CCWGG	1 cut(s)	61
BclI	TGATCA	1 cut(s)	475
BcnI	CCSGG	2 cut(s)	707, 920
BcoDI	GTCTC	3 cut(s)	40, 316, 722
BfaI	CTAG	1 cut(s)	89
BfmI	CTRYAG	3 cut(s)	675, 685, 1063
BfoI	RGCGCY	1 cut(s)	72
BglII	AGATCT	1 cut(s)	775
BisI	GCNGC	3 cut(s)	99, 235, 1066
BlsI	GCNGC	3 cut(s)	100, 236, 1067
Bme1390I	CCNGG	3 cut(s)	61, 707, 920
BmgT120I	GGNCC	1 cut(s)	277
BmiI	GGNNCC	3 cut(s)	70, 238, 453
BmrFI	CCNGG	3 cut(s)	61, 707, 920
BmsI	GCATC	6 cut(s)	148, 535, 791, 913, 952, 1051
BpiI	GAAGAC	2 cut(s)	19, 960
BpmI	CTGGAG	1 cut(s)	266
Bpu10I	CCTNAGC	1 cut(s)	143
BpuMI	CCSGG	2 cut(s)	707, 920
BsaAI	YACGTR	2 cut(s)	270, 788
BsaBI	GATNNNNATC	1 cut(s)	474
BsaHI	GRCGYC	2 cut(s)	69, 81
BsaI	GGTCTC	1 cut(s)	686
BsaJI	CCNNGG	2 cut(s)	60, 844
BsaWI	WCCGGW	1 cut(s)	652
Bsc4I	CCNNNNNNNGG	1 cut(s)	61
Bse1I	ACTGG	2 cut(s)	11, 283
Bse3DI	GCAATG	1 cut(s)	940
Bse8I	GATNNNNATC	1 cut(s)	474
BseBI	CCWGG	1 cut(s)	61
BseDI	CCNNGG	2 cut(s)	60, 844
BseGI	GGATG	5 cut(s)	137, 386, 526, 928, 967
BseJI	GATNNNNATC	1 cut(s)	474
BseLI	CCNNNNNNNGG	1 cut(s)	61
BseMI	GCAATG	1 cut(s)	940
BseMII	CTCAG	1 cut(s)	738
BseNI	ACTGG	2 cut(s)	11, 283
BseRI	GAGGAG	2 cut(s)	124, 1024
BseSI	GKGCMC	1 cut(s)	108
BseXI	GCAGC	1 cut(s)	1077
Bsh1236I	CGCG	1 cut(s)	234
BshFI	GGCC	2 cut(s)	279, 484
BshNI	GGYRCC	2 cut(s)	68, 236
BsiHKAI	GWGCWC	2 cut(s)	108, 429
BsiSI	CCGG	4 cut(s)	288, 653, 707, 919
BslFI	GGGAC	3 cut(s)	77, 689, 1097
BslI	CCNNNNNNNGG	1 cut(s)	61
BsmAI	GTCTC	5 cut(s)	37, 88, 181, 304, 686
BsmBI	CGTCTC	3 cut(s)	37, 88, 304
BsmFI	GGGAC	3 cut(s)	77, 689, 1097
BsmI	GAATGC	2 cut(s)	801, 1025
BsnI	GGCC	2 cut(s)	279, 484
Bso31I	GGTCTC	1 cut(s)	686
Bsp1286I	GDGCHC	2 cut(s)	108, 429
Bsp1407I	TGTACA	1 cut(s)	568
Bsp143I	GATC	7 cut(s)	181, 205, 475, 518, 727, 775, 1119
BspACI	CCGC	9 cut(s)	99, 165, 187, 234, 255, 938, 1018, 1038, 1123
BspANI	GGCC	2 cut(s)	279, 484
BspCNI	CTCAG	1 cut(s)	739
BspFNI	CGCG	1 cut(s)	234
BspLI	GGNNCC	3 cut(s)	70, 238, 453
BspMAI	CTGCAG	2 cut(s)	689, 1067
BspPI	GGATC	3 cut(s)	526, 735, 1114
BspT107I	GGYRCC	2 cut(s)	68, 236
BspTNI	GGTCTC	1 cut(s)	686
BsrBI	CCGCTC	1 cut(s)	189
BsrDI	GCAATG	1 cut(s)	940
BsrGI	TGTACA	1 cut(s)	568
BsrI	ACTGG	2 cut(s)	11, 283
BssECI	CCNNGG	2 cut(s)	60, 844
BssMI	GATC	7 cut(s)	181, 205, 475, 518, 727, 775, 1119
BssNI	GRCGYC	2 cut(s)	69, 81
BssT1I	CCWWGG	1 cut(s)	844
Bst2UI	CCWGG	1 cut(s)	61
Bst4CI	ACNGT	2 cut(s)	241, 338
BstACI	GRCGYC	2 cut(s)	69, 81
BstAPI	GCANNNNNTGC	2 cut(s)	779, 788
BstAUI	TGTACA	1 cut(s)	568
BstBAI	YACGTR	2 cut(s)	270, 788
BstC8I	GCNNGC	3 cut(s)	94, 149, 1040
BstDEI	CTNAG	3 cut(s)	143, 747, 756
BstF5I	GGATG	5 cut(s)	137, 386, 526, 928, 967
BstFNI	CGCG	1 cut(s)	234
BstH2I	RGCGCY	1 cut(s)	72
BstHHI	GCGC	2 cut(s)	71, 98
BstKTI	GATC	7 cut(s)	184, 208, 478, 521, 730, 778, 1122
BstMAI	GTCTC	5 cut(s)	37, 88, 181, 304, 686
BstMBI	GATC	7 cut(s)	181, 205, 475, 518, 727, 775, 1119
BstMWI	GCNNNNNNNGC	7 cut(s)	98, 254, 779, 788, 898, 907, 1062
BstNI	CCWGG	1 cut(s)	61
BstNSI	RCATGY	1 cut(s)	575
BstSCI	CCNGG	3 cut(s)	59, 705, 918
BstSFI	CTRYAG	3 cut(s)	675, 685, 1063
BstSLI	GKGCMC	1 cut(s)	108
BstUI	CGCG	1 cut(s)	234
BstV1I	GCAGC	1 cut(s)	1077
BstV2I	GAAGAC	2 cut(s)	19, 960
BstX2I	RGATCY	3 cut(s)	727, 775, 1119
BstYI	RGATCY	3 cut(s)	727, 775, 1119
BsuRI	GGCC	2 cut(s)	279, 484
BtsCI	GGATG	5 cut(s)	137, 386, 526, 928, 967
BtsI	GCAGTG	1 cut(s)	1130
BtsIMutI	CAGTG	1 cut(s)	1130
Cac8I	GCNNGC	3 cut(s)	94, 149, 1040
CfoI	GCGC	2 cut(s)	71, 98
Cfr13I	GGNCC	1 cut(s)	277
CseI	GACGC	1 cut(s)	70
Csp6I	GTAC	4 cut(s)	230, 293, 339, 569
CviAII	CATG	1 cut(s)	572
CviQI	GTAC	4 cut(s)	230, 293, 339, 569
DdeI	CTNAG	3 cut(s)	143, 747, 756
DinI	GGCGCC	1 cut(s)	70
DpnI	GATC	7 cut(s)	183, 207, 477, 520, 729, 777, 1121
DpnII	GATC	7 cut(s)	181, 205, 475, 518, 727, 775, 1119
DrdI	GACNNNNNNGTC	1 cut(s)	221
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	1 cut(s)	482
EciI	GGCGGA	1 cut(s)	244
Eco130I	CCWWGG	1 cut(s)	844
Eco31I	GGTCTC	1 cut(s)	686
Eco72I	CACGTG	2 cut(s)	270, 788
EcoRII	CCWGG	1 cut(s)	59
EcoT14I	CCWWGG	1 cut(s)	844
EgeI	GGCGCC	1 cut(s)	70
EheI	GGCGCC	1 cut(s)	70
ErhI	CCWWGG	1 cut(s)	844
Esp3I	CGTCTC	3 cut(s)	37, 88, 304
FaeI	CATG	1 cut(s)	575
FaiI	YATR	9 cut(s)	353, 573, 852, 998, 1000, 1070, 1088, 1141, 1143
FalI	AAGNNNNNCTT	2 cut(s)	514, 546
FaqI	GGGAC	3 cut(s)	77, 689, 1097
FatI	CATG	1 cut(s)	571
FauI	CCCGC	2 cut(s)	172, 1031
FauNDI	CATATG	1 cut(s)	998
FbaI	TGATCA	1 cut(s)	475
FblI	GTMKAC	1 cut(s)	261
Fnu4HI	GCNGC	3 cut(s)	99, 235, 1066
FokI	GGATG	5 cut(s)	124, 393, 513, 935, 974
Fsp4HI	GCNGC	3 cut(s)	99, 235, 1066
FspBI	CTAG	1 cut(s)	89
GlaI	GCGC	2 cut(s)	70, 97
GluI	GCNGC	3 cut(s)	99, 235, 1066
GsuI	CTGGAG	1 cut(s)	266
HaeII	RGCGCY	1 cut(s)	72
HaeIII	GGCC	2 cut(s)	279, 484
HapII	CCGG	4 cut(s)	288, 653, 707, 919
HgaI	GACGC	1 cut(s)	70
HhaI	GCGC	2 cut(s)	71, 98
Hin1I	GRCGYC	2 cut(s)	69, 81
Hin1II	CATG	1 cut(s)	575
Hin6I	GCGC	2 cut(s)	69, 96
HinP1I	GCGC	2 cut(s)	69, 96
HincII	GTYRAC	2 cut(s)	262, 334
HindII	GTYRAC	2 cut(s)	262, 334
HinfI	GANTC	7 cut(s)	48, 431, 487, 646, 702, 840, 1145
HpaII	CCGG	4 cut(s)	288, 653, 707, 919
HphI	GGTGA	2 cut(s)	115, 485
Hpy166II	GTNNAC	4 cut(s)	106, 262, 273, 334
Hpy188I	TCNGA	7 cut(s)	181, 214, 380, 391, 446, 748, 1005
Hpy188III	TCNNGA	5 cut(s)	17, 45, 359, 491, 977
Hpy8I	GTNNAC	4 cut(s)	106, 262, 273, 334
Hpy99I	CGWCG	5 cut(s)	10, 227, 245, 263, 266
HpyAV	CCTTC	3 cut(s)	361, 509, 1008
HpyCH4III	ACNGT	2 cut(s)	241, 338
HpyCH4IV	ACGT	3 cut(s)	269, 347, 787
HpyCH4V	TGCA	9 cut(s)	106, 562, 687, 723, 773, 782, 791, 965, 1065
HpyF10VI	GCNNNNNNNGC	7 cut(s)	98, 254, 779, 788, 898, 907, 1062
HpyF3I	CTNAG	3 cut(s)	143, 747, 756
HpySE526I	ACGT	3 cut(s)	269, 347, 787
Hsp92I	GRCGYC	2 cut(s)	69, 81
Hsp92II	CATG	1 cut(s)	575
HspAI	GCGC	2 cut(s)	69, 96
KasI	GGCGCC	1 cut(s)	68
Ksp22I	TGATCA	1 cut(s)	475
Kzo9I	GATC	7 cut(s)	181, 205, 475, 518, 727, 775, 1119
LmnI	GCTCC	1 cut(s)	156
Lsp1109I	GCAGC	1 cut(s)	1077
LweI	GCATC	6 cut(s)	148, 535, 791, 913, 952, 1051
MaeI	CTAG	1 cut(s)	89
MaeII	ACGT	3 cut(s)	269, 347, 787
MaeIII	GTNAC	1 cut(s)	903
MalI	GATC	7 cut(s)	183, 207, 477, 520, 729, 777, 1121
MbiI	CCGCTC	1 cut(s)	189
MboI	GATC	7 cut(s)	181, 205, 475, 518, 727, 775, 1119
MboII	GAAGA	5 cut(s)	19, 641, 655, 722, 965
MfeI	CAATTG	1 cut(s)	834
MflI	RGATCY	3 cut(s)	727, 775, 1119
MhlI	GDGCHC	2 cut(s)	108, 429
MluCI	AATT	6 cut(s)	118, 405, 436, 834, 865, 948
Mly113I	GGCGCC	1 cut(s)	69
MlyI	GAGTC	2 cut(s)	711, 849
MmeI	TCCRAC	1 cut(s)	237
MseI	TTAA	2 cut(s)	374, 1150
MslI	CAYNNNNRTG	1 cut(s)	1096
MspI	CCGG	4 cut(s)	288, 653, 707, 919
MspR9I	CCNGG	3 cut(s)	61, 707, 920
MunI	CAATTG	1 cut(s)	834
Mva1269I	GAATGC	2 cut(s)	801, 1025
MvaI	CCWGG	1 cut(s)	61
MvnI	CGCG	1 cut(s)	234
MwoI	GCNNNNNNNGC	7 cut(s)	98, 254, 779, 788, 898, 907, 1062
NarI	GGCGCC	1 cut(s)	69
NciI	CCSGG	2 cut(s)	707, 920
NdeI	CATATG	1 cut(s)	998
NdeII	GATC	7 cut(s)	181, 205, 475, 518, 727, 775, 1119
NlaIII	CATG	1 cut(s)	575
NlaIV	GGNNCC	3 cut(s)	70, 238, 453
NspI	RCATGY	1 cut(s)	575
OliI	CACNNNNGTG	1 cut(s)	1096
PcsI	WCGNNNNNNNCGW	1 cut(s)	210
PctI	GAATGC	2 cut(s)	801, 1025
PfeI	GAWTC	5 cut(s)	48, 431, 487, 646, 1145
PflFI	GACNNNGTC	1 cut(s)	23
PfoI	TCCNGGA	1 cut(s)	705
PkrI	GCNGC	3 cut(s)	100, 236, 1067
PleI	GAGTC	2 cut(s)	710, 848
PluTI	GGCGCC	1 cut(s)	72
PmaCI	CACGTG	2 cut(s)	270, 788
PmlI	CACGTG	2 cut(s)	270, 788
PpsI	GAGTC	2 cut(s)	710, 848
Ppu21I	YACGTR	2 cut(s)	270, 788
Psp6I	CCWGG	1 cut(s)	59
PspCI	CACGTG	2 cut(s)	270, 788
PspGI	CCWGG	1 cut(s)	59
PspN4I	GGNNCC	3 cut(s)	70, 238, 453
PspPI	GGNCC	1 cut(s)	277
PstI	CTGCAG	2 cut(s)	689, 1067
PsuI	RGATCY	3 cut(s)	727, 775, 1119
PsyI	GACNNNGTC	1 cut(s)	23
RsaI	GTAC	4 cut(s)	231, 294, 340, 570
RsaNI	GTAC	4 cut(s)	230, 293, 339, 569
RseI	CAYNNNNRTG	1 cut(s)	1096
SalI	GTCGAC	1 cut(s)	260
SaqAI	TTAA	2 cut(s)	374, 1150
SatI	GCNGC	3 cut(s)	99, 235, 1066
Sau3AI	GATC	7 cut(s)	181, 205, 475, 518, 727, 775, 1119
Sau96I	GGNCC	1 cut(s)	277
SchI	GAGTC	2 cut(s)	711, 849
ScrFI	CCNGG	3 cut(s)	61, 707, 920
SduI	GDGCHC	2 cut(s)	108, 429
SfaNI	GCATC	6 cut(s)	148, 535, 791, 913, 952, 1051
SfcI	CTRYAG	3 cut(s)	675, 685, 1063
SfoI	GGCGCC	1 cut(s)	70
SgrDI	CGTCGACG	1 cut(s)	260
SmiMI	CAYNNNNRTG	1 cut(s)	1096
Sse9I	AATT	6 cut(s)	118, 405, 436, 834, 865, 948
SsiI	CCGC	9 cut(s)	99, 165, 187, 234, 255, 938, 1018, 1038, 1123
SspDI	GGCGCC	1 cut(s)	68
SspMI	CTAG	1 cut(s)	89
StyD4I	CCNGG	3 cut(s)	59, 705, 918
StyI	CCWWGG	1 cut(s)	844
TaaI	ACNGT	2 cut(s)	241, 338
TaiI	ACGT	3 cut(s)	272, 350, 790
TaqI	TCGA	6 cut(s)	204, 243, 261, 434, 1045, 1077
TasI	AATT	6 cut(s)	118, 405, 436, 834, 865, 948
TatI	WGTACW	1 cut(s)	568
TauI	GCSGC	2 cut(s)	101, 237
TfiI	GAWTC	5 cut(s)	48, 431, 487, 646, 1145
Tru1I	TTAA	2 cut(s)	374, 1150
Tru9I	TTAA	2 cut(s)	374, 1150
TscAI	CASTG	1 cut(s)	1137
TseI	GCWGC	1 cut(s)	1065
TspDTI	ATGAA	1 cut(s)	1018
TspGWI	ACGGA	2 cut(s)	100, 143
TspRI	CASTG	1 cut(s)	1137
Tth111I	GACNNNGTC	1 cut(s)	23
VneI	GTGCAC	1 cut(s)	104
XapI	RAATTY	1 cut(s)	436
XceI	RCATGY	1 cut(s)	575
XmiI	GTMKAC	1 cut(s)	261
XspI	CTAG	1 cut(s)	89

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.