Mitochondrial ubiquitin ligase activator of NFKB
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54150 AT1G54150 |
| fragaria_vesca | FvH4_6g34790 |
| malus_domestica | MD02G1089500.v1.1 MD09G1182600.v1.1 MD09G1182700.v1.1 MD09G1182800.v1.1 |
| prunus_persica | Prupe.3G040200_v2.0.a1 |
| pyrus_communis | pycom02g07150 pycom09g09990 pycom09g10000 pycom09g10010 pycom09g10020 pycom10g20170 pycom10g20200 |
| rosa_chinensis | RchiOBHm_Chr2g0145651 |
| rosa_laevigata | RLG00000012894 RLG00000012896 RLG00000020156 |
| rosa_multiflora | Rmu_co8485045.1_g000001 Rmu_sc0000227.1_g000002 Rmu_sc0003046.1_g000004 Rmu_sc0006544.1_g000002 Rmu_sc0009650.1_g000008 Rmu_sc0024073.1_g000001 Rmu_sc0027050.1_g000002 |
| rosa_roxburghii | Rroxscaffold_152G00434660 Rroxscaffold_2G00100580 Rroxscaffold_7G00191020 |
| rosa_rugosa | Rorug02G0392400 |
| rosa_samantha | Rh2AG197700 Rh2AG446800 Rh2BG416100 Rh2BG458500 Rh2CG433500 Rh2DG205400 Rh2DG468100 Rh4AG042900 Rh4CG045900 Rh6AG435700 |
| rosa_wichuraiana | Rw2G036490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 3 cut(s) | 551, 613, 653 |
| AccB1I | GGYRCC | 1 cut(s) | 566 |
| AccBSI | CCGCTC | 2 cut(s) | 135, 519 |
| AccI | GTMKAC | 1 cut(s) | 591 |
| AccII | CGCG | 1 cut(s) | 564 |
| AccIII | TCCGGA | 1 cut(s) | 1195 |
| AciI | CCGC | 9 cut(s) | 83, 135, 277, 427, 454, 457, 517, 564, 1342 |
| AclWI | GGATC | 2 cut(s) | 508, 1333 |
| AcoI | YGGCCR | 1 cut(s) | 710 |
| AcsI | RAATTY | 1 cut(s) | 246 |
| AcuI | CTGAAG | 2 cut(s) | 647, 1188 |
| AcyI | GRCGYC | 1 cut(s) | 409 |
| AdeI | CACNNNGTG | 1 cut(s) | 1355 |
| AfaI | GTAC | 5 cut(s) | 87, 224, 561, 624, 670 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 389 |
| AgsI | TTSAA | 5 cut(s) | 613, 823, 922, 1056, 1181 |
| AjnI | CCWGG | 2 cut(s) | 228, 387 |
| AleI | CACNNNNGTG | 1 cut(s) | 1315 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 929, 961 |
| AluBI | AGCT | 5 cut(s) | 7, 550, 776, 1077, 1172 |
| AluI | AGCT | 5 cut(s) | 7, 550, 776, 1077, 1172 |
| Alw26I | GTCTC | 3 cut(s) | 509, 634, 937 |
| AlwI | GGATC | 2 cut(s) | 508, 1333 |
| Aor13HI | TCCGGA | 1 cut(s) | 1195 |
| AoxI | GGCC | 3 cut(s) | 49, 487, 710 |
| ApeKI | GCWGC | 1 cut(s) | 1151 |
| ApoI | RAATTY | 1 cut(s) | 246 |
| AspLEI | GCGC | 3 cut(s) | 399, 426, 436 |
| AspS9I | GGNCC | 2 cut(s) | 49, 488 |
| AsuC2I | CCSGG | 1 cut(s) | 1148 |
| AsuHPI | GGTGA | 2 cut(s) | 443, 713 |
| BanI | GGYRCC | 1 cut(s) | 566 |
| BbsI | GAAGAC | 1 cut(s) | 1240 |
| BbvCI | CCTCAGC | 1 cut(s) | 464 |
| BbvI | GCAGC | 1 cut(s) | 1138 |
| BccI | CCATC | 5 cut(s) | 183, 363, 692, 762, 988 |
| BceAI | ACGGC | 5 cut(s) | 410, 414, 480, 610, 638 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 4, 38, 1254, 1276, 1288, 1310 |
| BciT130I | CCWGG | 2 cut(s) | 230, 389 |
| BclI | TGATCA | 2 cut(s) | 535, 703 |
| BcnI | CCSGG | 1 cut(s) | 1148 |
| BcoDI | GTCTC | 3 cut(s) | 509, 634, 937 |
| BfaI | CTAG | 2 cut(s) | 179, 984 |
| BfmI | CTRYAG | 1 cut(s) | 1282 |
| BfoI | RGCGCY | 1 cut(s) | 400 |
| BglII | AGATCT | 1 cut(s) | 1003 |
| BisI | GCNGC | 4 cut(s) | 427, 457, 565, 1152 |
| BlsI | GCNGC | 4 cut(s) | 428, 458, 566, 1153 |
| BmcAI | AGTACT | 1 cut(s) | 670 |
| Bme1390I | CCNGG | 3 cut(s) | 230, 389, 1148 |
| BmgT120I | GGNCC | 2 cut(s) | 49, 488 |
| BmiI | GGNNCC | 3 cut(s) | 490, 568, 681 |
| BmrFI | CCNGG | 3 cut(s) | 230, 389, 1148 |
| BmsI | GCATC | 2 cut(s) | 1019, 1270 |
| BpiI | GAAGAC | 1 cut(s) | 1240 |
| Bpu10I | CCTNAGC | 2 cut(s) | 464, 1073 |
| BpuEI | CTTGAG | 1 cut(s) | 94 |
| BpuMI | CCSGG | 1 cut(s) | 1148 |
| Bsa29I | ATCGAT | 2 cut(s) | 512, 745 |
| BsaBI | GATNNNNATC | 1 cut(s) | 702 |
| BsaHI | GRCGYC | 1 cut(s) | 409 |
| BsaJI | CCNNGG | 1 cut(s) | 388 |
| BsaWI | WCCGGW | 2 cut(s) | 880, 1195 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 389 |
| Bse8I | GATNNNNATC | 1 cut(s) | 702 |
| BseAI | TCCGGA | 1 cut(s) | 1195 |
| BseBI | CCWGG | 2 cut(s) | 230, 389 |
| BseCI | ATCGAT | 2 cut(s) | 512, 745 |
| BseDI | CCNNGG | 1 cut(s) | 388 |
| BseGI | GGATG | 4 cut(s) | 657, 754, 994, 1195 |
| BseJI | GATNNNNATC | 1 cut(s) | 702 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 389 |
| BseMII | CTCAG | 2 cut(s) | 478, 966 |
| BseRI | GAGGAG | 2 cut(s) | 452, 1243 |
| BseXI | GCAGC | 1 cut(s) | 1138 |
| BseYI | CCCAGC | 1 cut(s) | 491 |
| Bsh1236I | CGCG | 1 cut(s) | 564 |
| Bsh1285I | CGRYCG | 1 cut(s) | 512 |
| BshFI | GGCC | 3 cut(s) | 51, 489, 712 |
| BshNI | GGYRCC | 1 cut(s) | 566 |
| BshVI | ATCGAT | 2 cut(s) | 512, 745 |
| BsiEI | CGRYCG | 1 cut(s) | 512 |
| BsiSI | CCGG | 4 cut(s) | 618, 881, 1147, 1196 |
| BslFI | GGGAC | 5 cut(s) | 168, 405, 568, 1215, 1316 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 389 |
| BsmAI | GTCTC | 3 cut(s) | 509, 634, 937 |
| BsmBI | CGTCTC | 1 cut(s) | 634 |
| BsmFI | GGGAC | 5 cut(s) | 168, 405, 568, 1215, 1316 |
| BsmI | GAATGC | 2 cut(s) | 1029, 1244 |
| BsnI | GGCC | 3 cut(s) | 51, 489, 712 |
| Bsp13I | TCCGGA | 1 cut(s) | 1195 |
| Bsp1407I | TGTACA | 1 cut(s) | 222 |
| BspACI | CCGC | 9 cut(s) | 83, 135, 277, 427, 454, 457, 517, 564, 1342 |
| BspANI | GGCC | 3 cut(s) | 51, 489, 712 |
| BspCNI | CTCAG | 2 cut(s) | 477, 967 |
| BspDI | ATCGAT | 2 cut(s) | 512, 745 |
| BspEI | TCCGGA | 1 cut(s) | 1195 |
| BspFNI | CGCG | 1 cut(s) | 564 |
| BspLI | GGNNCC | 3 cut(s) | 490, 568, 681 |
| BspPI | GGATC | 2 cut(s) | 508, 1333 |
| BspT107I | GGYRCC | 1 cut(s) | 566 |
| BsrBI | CCGCTC | 2 cut(s) | 135, 519 |
| BsrGI | TGTACA | 1 cut(s) | 222 |
| BssECI | CCNNGG | 1 cut(s) | 388 |
| BssNI | GRCGYC | 1 cut(s) | 409 |
| Bst2UI | CCWGG | 2 cut(s) | 230, 389 |
| Bst4CI | ACNGT | 4 cut(s) | 30, 571, 679, 865 |
| Bst6I | CTCTTC | 1 cut(s) | 1179 |
| BstACI | GRCGYC | 1 cut(s) | 409 |
| BstAUI | TGTACA | 1 cut(s) | 222 |
| BstC8I | GCNNGC | 1 cut(s) | 422 |
| BstDEI | CTNAG | 5 cut(s) | 464, 471, 672, 975, 1073 |
| BstF5I | GGATG | 4 cut(s) | 657, 754, 994, 1195 |
| BstFNI | CGCG | 1 cut(s) | 564 |
| BstH2I | RGCGCY | 1 cut(s) | 400 |
| BstHHI | GCGC | 3 cut(s) | 399, 426, 436 |
| BstMAI | GTCTC | 3 cut(s) | 509, 634, 937 |
| BstMCI | CGRYCG | 1 cut(s) | 512 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 426, 465, 1126, 1135 |
| BstNI | CCWGG | 2 cut(s) | 230, 389 |
| BstSCI | CCNGG | 3 cut(s) | 228, 387, 1146 |
| BstSFI | CTRYAG | 1 cut(s) | 1282 |
| BstUI | CGCG | 1 cut(s) | 564 |
| BstV1I | GCAGC | 1 cut(s) | 1138 |
| BstV2I | GAAGAC | 1 cut(s) | 1240 |
| BstX2I | RGATCY | 2 cut(s) | 1003, 1338 |
| BstYI | RGATCY | 2 cut(s) | 1003, 1338 |
| Bsu15I | ATCGAT | 2 cut(s) | 512, 745 |
| BsuRI | GGCC | 3 cut(s) | 51, 489, 712 |
| BsuTUI | ATCGAT | 2 cut(s) | 512, 745 |
| BtsCI | GGATG | 4 cut(s) | 657, 754, 994, 1195 |
| BtsI | GCAGTG | 1 cut(s) | 1349 |
| BtsIMutI | CAGTG | 3 cut(s) | 26, 861, 1349 |
| Cac8I | GCNNGC | 1 cut(s) | 422 |
| CfoI | GCGC | 3 cut(s) | 399, 426, 436 |
| Cfr13I | GGNCC | 2 cut(s) | 49, 488 |
| ClaI | ATCGAT | 2 cut(s) | 512, 745 |
| CseI | GACGC | 1 cut(s) | 398 |
| CsiI | ACCWGGT | 1 cut(s) | 228 |
| Csp6I | GTAC | 5 cut(s) | 86, 223, 560, 623, 669 |
| CviAII | CATG | 2 cut(s) | 158, 600 |
| CviQI | GTAC | 5 cut(s) | 86, 223, 560, 623, 669 |
| DdeI | CTNAG | 5 cut(s) | 464, 471, 672, 975, 1073 |
| DraIII | CACNNNGTG | 1 cut(s) | 1355 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 551, 613, 653 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 551, 613, 653 |
| EaeI | YGGCCR | 1 cut(s) | 710 |
| Eam1104I | CTCTTC | 1 cut(s) | 1179 |
| EarI | CTCTTC | 1 cut(s) | 1179 |
| Eco57I | CTGAAG | 2 cut(s) | 647, 1188 |
| EcoO109I | RGGNCCY | 1 cut(s) | 488 |
| EcoRII | CCWGG | 2 cut(s) | 228, 387 |
| Esp3I | CGTCTC | 1 cut(s) | 634 |
| FaeI | CATG | 2 cut(s) | 161, 603 |
| FaqI | GGGAC | 5 cut(s) | 168, 405, 568, 1215, 1316 |
| FatI | CATG | 2 cut(s) | 157, 599 |
| FauNDI | CATATG | 1 cut(s) | 1217 |
| FbaI | TGATCA | 2 cut(s) | 535, 703 |
| FblI | GTMKAC | 1 cut(s) | 591 |
| Fnu4HI | GCNGC | 4 cut(s) | 427, 457, 565, 1152 |
| FokI | GGATG | 4 cut(s) | 644, 741, 1001, 1202 |
| Fsp4HI | GCNGC | 4 cut(s) | 427, 457, 565, 1152 |
| FspBI | CTAG | 2 cut(s) | 179, 984 |
| GlaI | GCGC | 3 cut(s) | 398, 425, 435 |
| GluI | GCNGC | 4 cut(s) | 427, 457, 565, 1152 |
| GsaI | CCCAGC | 1 cut(s) | 495 |
| HaeII | RGCGCY | 1 cut(s) | 400 |
| HaeIII | GGCC | 3 cut(s) | 51, 489, 712 |
| HapII | CCGG | 4 cut(s) | 618, 881, 1147, 1196 |
| HgaI | GACGC | 1 cut(s) | 398 |
| HhaI | GCGC | 3 cut(s) | 399, 426, 436 |
| Hin1I | GRCGYC | 1 cut(s) | 409 |
| Hin1II | CATG | 2 cut(s) | 161, 603 |
| Hin6I | GCGC | 3 cut(s) | 397, 424, 434 |
| HinP1I | GCGC | 3 cut(s) | 397, 424, 434 |
| HincII | GTYRAC | 2 cut(s) | 592, 868 |
| HindII | GTYRAC | 2 cut(s) | 592, 868 |
| HindIII | AAGCTT | 1 cut(s) | 5 |
| HinfI | GANTC | 7 cut(s) | 114, 715, 874, 930, 1068, 1266, 1364 |
| HpaII | CCGG | 4 cut(s) | 618, 881, 1147, 1196 |
| HphI | GGTGA | 2 cut(s) | 443, 713 |
| Hpy166II | GTNNAC | 3 cut(s) | 61, 592, 868 |
| Hpy188I | TCNGA | 7 cut(s) | 312, 344, 509, 544, 666, 937, 976 |
| Hpy188III | TCNNGA | 6 cut(s) | 73, 153, 719, 820, 1033, 1196 |
| Hpy8I | GTNNAC | 3 cut(s) | 61, 592, 868 |
| Hpy99I | CGWCG | 6 cut(s) | 344, 414, 557, 575, 593, 596 |
| HpyAV | CCTTC | 4 cut(s) | 619, 671, 813, 817 |
| HpyCH4III | ACNGT | 4 cut(s) | 30, 571, 679, 865 |
| HpyCH4V | TGCA | 9 cut(s) | 217, 256, 267, 790, 915, 951, 1010, 1040, 1082 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 426, 465, 1126, 1135 |
| HpyF3I | CTNAG | 5 cut(s) | 464, 471, 672, 975, 1073 |
| Hsp92I | GRCGYC | 1 cut(s) | 409 |
| Hsp92II | CATG | 2 cut(s) | 161, 603 |
| HspAI | GCGC | 3 cut(s) | 397, 424, 434 |
| Kpn2I | TCCGGA | 1 cut(s) | 1195 |
| Ksp22I | TGATCA | 2 cut(s) | 535, 703 |
| LmnI | GCTCC | 1 cut(s) | 441 |
| Lsp1109I | GCAGC | 1 cut(s) | 1138 |
| LweI | GCATC | 2 cut(s) | 1019, 1270 |
| MabI | ACCWGGT | 1 cut(s) | 228 |
| MaeI | CTAG | 2 cut(s) | 179, 984 |
| MaeIII | GTNAC | 1 cut(s) | 1131 |
| MbiI | CCGCTC | 2 cut(s) | 135, 519 |
| MboII | GAAGA | 6 cut(s) | 173, 869, 950, 1193, 1196, 1245 |
| MflI | RGATCY | 2 cut(s) | 1003, 1338 |
| MluCI | AATT | 5 cut(s) | 42, 246, 270, 1093, 1176 |
| MlyI | GAGTC | 3 cut(s) | 939, 1077, 1275 |
| MmeI | TCCRAC | 3 cut(s) | 322, 979, 1045 |
| MroI | TCCGGA | 1 cut(s) | 1195 |
| MseI | TTAA | 3 cut(s) | 273, 294, 1369 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1022, 1315 |
| MspI | CCGG | 4 cut(s) | 618, 881, 1147, 1196 |
| MspR9I | CCNGG | 3 cut(s) | 230, 389, 1148 |
| Mva1269I | GAATGC | 2 cut(s) | 1029, 1244 |
| MvaI | CCWGG | 2 cut(s) | 230, 389 |
| MvnI | CGCG | 1 cut(s) | 564 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 426, 465, 1126, 1135 |
| NciI | CCSGG | 1 cut(s) | 1148 |
| NdeI | CATATG | 1 cut(s) | 1217 |
| NlaIII | CATG | 2 cut(s) | 161, 603 |
| NlaIV | GGNNCC | 3 cut(s) | 490, 568, 681 |
| OliI | CACNNNNGTG | 1 cut(s) | 1315 |
| PctI | GAATGC | 2 cut(s) | 1029, 1244 |
| PfeI | GAWTC | 4 cut(s) | 114, 715, 874, 1364 |
| PkrI | GCNGC | 4 cut(s) | 428, 458, 566, 1153 |
| Ple19I | CGATCG | 1 cut(s) | 512 |
| PleI | GAGTC | 3 cut(s) | 938, 1076, 1274 |
| PpsI | GAGTC | 3 cut(s) | 938, 1076, 1274 |
| Psp6I | CCWGG | 2 cut(s) | 228, 387 |
| PspFI | CCCAGC | 1 cut(s) | 491 |
| PspGI | CCWGG | 2 cut(s) | 228, 387 |
| PspN4I | GGNNCC | 3 cut(s) | 490, 568, 681 |
| PspPI | GGNCC | 2 cut(s) | 49, 488 |
| PsuI | RGATCY | 2 cut(s) | 1003, 1338 |
| PvuI | CGATCG | 1 cut(s) | 512 |
| RsaI | GTAC | 5 cut(s) | 87, 224, 561, 624, 670 |
| RsaNI | GTAC | 5 cut(s) | 86, 223, 560, 623, 669 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1022, 1315 |
| SalI | GTCGAC | 1 cut(s) | 590 |
| SaqAI | TTAA | 3 cut(s) | 273, 294, 1369 |
| SatI | GCNGC | 4 cut(s) | 427, 457, 565, 1152 |
| Sau96I | GGNCC | 2 cut(s) | 49, 488 |
| ScaI | AGTACT | 1 cut(s) | 670 |
| SchI | GAGTC | 3 cut(s) | 939, 1077, 1275 |
| ScrFI | CCNGG | 3 cut(s) | 230, 389, 1148 |
| SexAI | ACCWGGT | 1 cut(s) | 228 |
| SfaNI | GCATC | 2 cut(s) | 1019, 1270 |
| SfcI | CTRYAG | 1 cut(s) | 1282 |
| SgrDI | CGTCGACG | 1 cut(s) | 590 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1022, 1315 |
| SmlI | CTYRAG | 1 cut(s) | 73 |
| SmoI | CTYRAG | 1 cut(s) | 73 |
| Sse9I | AATT | 5 cut(s) | 42, 246, 270, 1093, 1176 |
| SsiI | CCGC | 9 cut(s) | 83, 135, 277, 427, 454, 457, 517, 564, 1342 |
| SspMI | CTAG | 2 cut(s) | 179, 984 |
| StyD4I | CCNGG | 3 cut(s) | 228, 387, 1146 |
| TaaI | ACNGT | 4 cut(s) | 30, 571, 679, 865 |
| TaqI | TCGA | 7 cut(s) | 125, 512, 573, 591, 745, 1264, 1296 |
| TasI | AATT | 5 cut(s) | 42, 246, 270, 1093, 1176 |
| TatI | WGTACW | 2 cut(s) | 222, 668 |
| TauI | GCSGC | 3 cut(s) | 429, 459, 567 |
| TfiI | GAWTC | 4 cut(s) | 114, 715, 874, 1364 |
| Tru1I | TTAA | 3 cut(s) | 273, 294, 1369 |
| Tru9I | TTAA | 3 cut(s) | 273, 294, 1369 |
| TscAI | CASTG | 3 cut(s) | 33, 868, 1356 |
| TseI | GCWGC | 1 cut(s) | 1151 |
| TspDTI | ATGAA | 4 cut(s) | 17, 174, 804, 1237 |
| TspGWI | ACGGA | 2 cut(s) | 428, 471 |
| TspRI | CASTG | 3 cut(s) | 33, 868, 1356 |
| XapI | RAATTY | 1 cut(s) | 246 |
| XmiI | GTMKAC | 1 cut(s) | 591 |
| XspI | CTAG | 2 cut(s) | 179, 984 |
| ZrmI | AGTACT | 1 cut(s) | 670 |