26S proteasome non-atpase regulatory subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| VWA_2 | PF13519 | 79 - 188 | 2.8e-32 | von Willebrand factor type A domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 773 |
| AarI | CACCTGC | 1 cut(s) | 836 |
| Acc36I | ACCTGC | 3 cut(s) | 734, 836, 1150 |
| AccIII | TCCGGA | 1 cut(s) | 352 |
| AciI | CCGC | 4 cut(s) | 98, 268, 330, 824 |
| AclWI | GGATC | 5 cut(s) | 872, 884, 885, 897, 1328 |
| AcsI | RAATTY | 1 cut(s) | 62 |
| AcuI | CTGAAG | 2 cut(s) | 1080, 1323 |
| AfaI | GTAC | 3 cut(s) | 72, 738, 768 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 25, 1050, 1198 |
| AgsI | TTSAA | 4 cut(s) | 62, 299, 921, 1214 |
| AjnI | CCWGG | 4 cut(s) | 91, 477, 885, 1315 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 742, 774, 1321, 1353 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 378, 410 |
| Alw21I | GWGCWC | 2 cut(s) | 228, 757 |
| Alw26I | GTCTC | 1 cut(s) | 859 |
| AlwI | GGATC | 5 cut(s) | 872, 884, 885, 897, 1328 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 833, 1382 |
| Ama87I | CYCGRG | 1 cut(s) | 227 |
| Aor13HI | TCCGGA | 1 cut(s) | 352 |
| AoxI | GGCC | 5 cut(s) | 16, 21, 306, 936, 1116 |
| ApoI | RAATTY | 1 cut(s) | 62 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1271, 1303 |
| AspS9I | GGNCC | 6 cut(s) | 16, 21, 95, 746, 936, 1117 |
| AsuC2I | CCSGG | 1 cut(s) | 20 |
| AsuHPI | GGTGA | 4 cut(s) | 367, 479, 665, 1244 |
| AvaI | CYCGRG | 1 cut(s) | 227 |
| AvaII | GGWCC | 2 cut(s) | 95, 746 |
| BamHI | GGATCC | 2 cut(s) | 877, 889 |
| BbsI | GAAGAC | 2 cut(s) | 1287, 1404 |
| Bbv12I | GWGCWC | 2 cut(s) | 228, 757 |
| BbvCI | CCTCAGC | 1 cut(s) | 969 |
| BccI | CCATC | 4 cut(s) | 791, 791, 1126, 1307 |
| BceAI | ACGGC | 1 cut(s) | 289 |
| BciT130I | CCWGG | 4 cut(s) | 93, 479, 887, 1317 |
| BclI | TGATCA | 1 cut(s) | 1384 |
| BcnI | CCSGG | 1 cut(s) | 20 |
| BcoDI | GTCTC | 1 cut(s) | 859 |
| BfaI | CTAG | 2 cut(s) | 683, 1205 |
| BfmI | CTRYAG | 1 cut(s) | 843 |
| BfuAI | ACCTGC | 3 cut(s) | 734, 836, 1150 |
| Bme1390I | CCNGG | 5 cut(s) | 20, 93, 479, 887, 1317 |
| Bme18I | GGWCC | 2 cut(s) | 95, 746 |
| BmeT110I | CYCGRG | 1 cut(s) | 227 |
| BmgT120I | GGNCC | 6 cut(s) | 16, 21, 95, 746, 936, 1117 |
| BmiI | GGNNCC | 2 cut(s) | 879, 891 |
| BmrFI | CCNGG | 5 cut(s) | 20, 93, 479, 887, 1317 |
| BmrI | ACTGGG | 1 cut(s) | 801 |
| BmsI | GCATC | 5 cut(s) | 255, 301, 526, 964, 1012 |
| BmuI | ACTGGG | 1 cut(s) | 801 |
| BoxI | GACNNNNGTC | 1 cut(s) | 720 |
| BpiI | GAAGAC | 2 cut(s) | 1287, 1404 |
| Bpu10I | CCTNAGC | 3 cut(s) | 303, 894, 969 |
| BpuEI | CTTGAG | 2 cut(s) | 16, 497 |
| BpuMI | CCSGG | 1 cut(s) | 20 |
| BsaAI | YACGTR | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 4 cut(s) | 24, 219, 378, 1316 |
| BsaWI | WCCGGW | 1 cut(s) | 352 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 25, 1050, 1198 |
| Bse1I | ACTGG | 6 cut(s) | 60, 417, 720, 796, 1044, 1282 |
| Bse3DI | GCAATG | 1 cut(s) | 1131 |
| BseAI | TCCGGA | 1 cut(s) | 352 |
| BseBI | CCWGG | 4 cut(s) | 93, 479, 887, 1317 |
| BseDI | CCNNGG | 4 cut(s) | 24, 219, 378, 1316 |
| BseGI | GGATG | 6 cut(s) | 270, 802, 979, 1096, 1141, 1299 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 25, 1050, 1198 |
| BseMI | GCAATG | 1 cut(s) | 1131 |
| BseMII | CTCAG | 5 cut(s) | 317, 885, 960, 1056, 1170 |
| BseNI | ACTGG | 6 cut(s) | 60, 417, 720, 796, 1044, 1282 |
| BseRI | GAGGAG | 2 cut(s) | 124, 944 |
| BshFI | GGCC | 5 cut(s) | 18, 23, 308, 938, 1118 |
| BsiHKAI | GWGCWC | 2 cut(s) | 228, 757 |
| BsiHKCI | CYCGRG | 1 cut(s) | 227 |
| BsiSI | CCGG | 2 cut(s) | 19, 353 |
| BslFI | GGGAC | 1 cut(s) | 1066 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 25, 1050, 1198 |
| BsmAI | GTCTC | 1 cut(s) | 859 |
| BsmFI | GGGAC | 1 cut(s) | 1066 |
| BsmI | GAATGC | 2 cut(s) | 489, 1105 |
| BsnI | GGCC | 5 cut(s) | 18, 23, 308, 938, 1118 |
| BsoBI | CYCGRG | 1 cut(s) | 227 |
| Bsp1286I | GDGCHC | 2 cut(s) | 228, 757 |
| Bsp13I | TCCGGA | 1 cut(s) | 352 |
| Bsp143I | GATC | 9 cut(s) | 182, 196, 240, 324, 421, 877, 889, 1333, 1384 |
| Bsp19I | CCATGG | 2 cut(s) | 219, 378 |
| BspACI | CCGC | 4 cut(s) | 98, 268, 330, 824 |
| BspANI | GGCC | 5 cut(s) | 18, 23, 308, 938, 1118 |
| BspCNI | CTCAG | 5 cut(s) | 316, 886, 961, 1057, 1171 |
| BspEI | TCCGGA | 1 cut(s) | 352 |
| BspLI | GGNNCC | 2 cut(s) | 879, 891 |
| BspMAI | CTGCAG | 1 cut(s) | 847 |
| BspMI | ACCTGC | 3 cut(s) | 734, 836, 1150 |
| BspPI | GGATC | 5 cut(s) | 872, 884, 885, 897, 1328 |
| BspQI | GCTCTTC | 1 cut(s) | 1215 |
| BsrDI | GCAATG | 1 cut(s) | 1131 |
| BsrI | ACTGG | 6 cut(s) | 60, 417, 720, 796, 1044, 1282 |
| BssECI | CCNNGG | 4 cut(s) | 24, 219, 378, 1316 |
| BssMI | GATC | 9 cut(s) | 182, 196, 240, 324, 421, 877, 889, 1333, 1384 |
| BssT1I | CCWWGG | 2 cut(s) | 219, 378 |
| Bst2UI | CCWGG | 4 cut(s) | 93, 479, 887, 1317 |
| Bst4CI | ACNGT | 3 cut(s) | 75, 364, 626 |
| Bst6I | CTCTTC | 2 cut(s) | 921, 1215 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 695, 833 |
| BstBAI | YACGTR | 1 cut(s) | 41 |
| BstC8I | GCNNGC | 7 cut(s) | 442, 446, 487, 900, 979, 1041, 1356 |
| BstDEI | CTNAG | 6 cut(s) | 303, 894, 911, 969, 1065, 1179 |
| BstDSI | CCRYGG | 2 cut(s) | 219, 378 |
| BstF5I | GGATG | 6 cut(s) | 270, 802, 979, 1096, 1141, 1299 |
| BstKTI | GATC | 9 cut(s) | 185, 199, 243, 327, 424, 880, 892, 1336, 1387 |
| BstMAI | GTCTC | 1 cut(s) | 859 |
| BstMBI | GATC | 9 cut(s) | 182, 196, 240, 324, 421, 877, 889, 1333, 1384 |
| BstNI | CCWGG | 4 cut(s) | 93, 479, 887, 1317 |
| BstNSI | RCATGY | 2 cut(s) | 444, 448 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 720 |
| BstSCI | CCNGG | 5 cut(s) | 18, 91, 477, 885, 1315 |
| BstSFI | CTRYAG | 1 cut(s) | 843 |
| BstV2I | GAAGAC | 2 cut(s) | 1287, 1404 |
| BstX2I | RGATCY | 2 cut(s) | 877, 889 |
| BstYI | RGATCY | 2 cut(s) | 877, 889 |
| BsuRI | GGCC | 5 cut(s) | 18, 23, 308, 938, 1118 |
| BtgI | CCRYGG | 2 cut(s) | 219, 378 |
| BtgZI | GCGATG | 1 cut(s) | 503 |
| BtsCI | GGATG | 6 cut(s) | 270, 802, 979, 1096, 1141, 1299 |
| BtsIMutI | CAGTG | 5 cut(s) | 53, 424, 631, 789, 1051 |
| BveI | ACCTGC | 3 cut(s) | 734, 836, 1150 |
| Cac8I | GCNNGC | 7 cut(s) | 442, 446, 487, 900, 979, 1041, 1356 |
| CaiI | CAGNNNCTG | 2 cut(s) | 833, 1382 |
| Cfr13I | GGNCC | 6 cut(s) | 16, 21, 95, 746, 936, 1117 |
| Csp6I | GTAC | 3 cut(s) | 71, 737, 767 |
| CviQI | GTAC | 3 cut(s) | 71, 737, 767 |
| DdeI | CTNAG | 6 cut(s) | 303, 894, 911, 969, 1065, 1179 |
| DpnI | GATC | 9 cut(s) | 184, 198, 242, 326, 423, 879, 891, 1335, 1386 |
| DpnII | GATC | 9 cut(s) | 182, 196, 240, 324, 421, 877, 889, 1333, 1384 |
| Eam1104I | CTCTTC | 2 cut(s) | 921, 1215 |
| EarI | CTCTTC | 2 cut(s) | 921, 1215 |
| Eco130I | CCWWGG | 2 cut(s) | 219, 378 |
| Eco32I | GATATC | 1 cut(s) | 640 |
| Eco47I | GGWCC | 2 cut(s) | 95, 746 |
| Eco57I | CTGAAG | 2 cut(s) | 1080, 1323 |
| Eco88I | CYCGRG | 1 cut(s) | 227 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1117 |
| EcoRI | GAATTC | 1 cut(s) | 62 |
| EcoRII | CCWGG | 4 cut(s) | 91, 477, 885, 1315 |
| EcoRV | GATATC | 1 cut(s) | 640 |
| EcoT14I | CCWWGG | 2 cut(s) | 219, 378 |
| EcoT22I | ATGCAT | 2 cut(s) | 446, 450 |
| ErhI | CCWWGG | 2 cut(s) | 219, 378 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 678, 710, 1338, 1370 |
| FaqI | GGGAC | 1 cut(s) | 1066 |
| FbaI | TGATCA | 1 cut(s) | 1384 |
| FokI | GGATG | 6 cut(s) | 277, 809, 986, 1103, 1148, 1286 |
| FspBI | CTAG | 2 cut(s) | 683, 1205 |
| HaeIII | GGCC | 5 cut(s) | 18, 23, 308, 938, 1118 |
| HapII | CCGG | 2 cut(s) | 19, 353 |
| HincII | GTYRAC | 1 cut(s) | 1324 |
| HindII | GTYRAC | 1 cut(s) | 1324 |
| HindIII | AAGCTT | 2 cut(s) | 34, 587 |
| HinfI | GANTC | 4 cut(s) | 29, 50, 433, 1241 |
| HpaII | CCGG | 2 cut(s) | 19, 353 |
| HphI | GGTGA | 4 cut(s) | 367, 479, 665, 1244 |
| Hpy166II | GTNNAC | 2 cut(s) | 706, 1324 |
| Hpy188I | TCNGA | 9 cut(s) | 259, 324, 676, 763, 1060, 1180, 1246, 1378, 1389 |
| Hpy188III | TCNNGA | 5 cut(s) | 194, 353, 893, 1163, 1226 |
| Hpy8I | GTNNAC | 2 cut(s) | 706, 1324 |
| Hpy99I | CGWCG | 2 cut(s) | 50, 292 |
| HpyAV | CCTTC | 5 cut(s) | 118, 600, 797, 1223, 1347 |
| HpyCH4III | ACNGT | 3 cut(s) | 75, 364, 626 |
| HpyCH4IV | ACGT | 1 cut(s) | 40 |
| HpyF3I | CTNAG | 6 cut(s) | 303, 894, 911, 969, 1065, 1179 |
| HpySE526I | ACGT | 1 cut(s) | 40 |
| Kpn2I | TCCGGA | 1 cut(s) | 352 |
| Ksp22I | TGATCA | 1 cut(s) | 1384 |
| Kzo9I | GATC | 9 cut(s) | 182, 196, 240, 324, 421, 877, 889, 1333, 1384 |
| LguI | GCTCTTC | 1 cut(s) | 1215 |
| LmnI | GCTCC | 3 cut(s) | 289, 332, 1036 |
| LweI | GCATC | 5 cut(s) | 255, 301, 526, 964, 1012 |
| MaeI | CTAG | 2 cut(s) | 683, 1205 |
| MaeII | ACGT | 1 cut(s) | 40 |
| MaeIII | GTNAC | 3 cut(s) | 51, 406, 722 |
| MalI | GATC | 9 cut(s) | 184, 198, 242, 326, 423, 879, 891, 1335, 1386 |
| MboI | GATC | 9 cut(s) | 182, 196, 240, 324, 421, 877, 889, 1333, 1384 |
| MfeI | CAATTG | 2 cut(s) | 503, 1214 |
| MflI | RGATCY | 2 cut(s) | 877, 889 |
| MhlI | GDGCHC | 2 cut(s) | 228, 757 |
| MluCI | AATT | 8 cut(s) | 62, 108, 253, 459, 503, 646, 1214, 1268 |
| MlyI | GAGTC | 2 cut(s) | 23, 59 |
| MmeI | TCCRAC | 1 cut(s) | 437 |
| Mph1103I | ATGCAT | 2 cut(s) | 446, 450 |
| MroI | TCCGGA | 1 cut(s) | 352 |
| MseI | TTAA | 3 cut(s) | 573, 614, 1344 |
| MslI | CAYNNNNRTG | 1 cut(s) | 494 |
| MspA1I | CMGCKG | 4 cut(s) | 824, 830, 953, 968 |
| MspI | CCGG | 2 cut(s) | 19, 353 |
| MspR9I | CCNGG | 5 cut(s) | 20, 93, 479, 887, 1317 |
| MunI | CAATTG | 2 cut(s) | 503, 1214 |
| Mva1269I | GAATGC | 2 cut(s) | 489, 1105 |
| MvaI | CCWGG | 4 cut(s) | 93, 479, 887, 1317 |
| NciI | CCSGG | 1 cut(s) | 20 |
| NcoI | CCATGG | 2 cut(s) | 219, 378 |
| NdeII | GATC | 9 cut(s) | 182, 196, 240, 324, 421, 877, 889, 1333, 1384 |
| NlaIV | GGNNCC | 2 cut(s) | 879, 891 |
| NmeAIII | GCCGAG | 1 cut(s) | 49 |
| NmuCI | GTSAC | 3 cut(s) | 51, 406, 722 |
| NsiI | ATGCAT | 2 cut(s) | 446, 450 |
| NspI | RCATGY | 2 cut(s) | 444, 448 |
| PaeI | GCATGC | 2 cut(s) | 444, 448 |
| PaeR7I | CTCGAG | 1 cut(s) | 227 |
| PaqCI | CACCTGC | 1 cut(s) | 836 |
| PciSI | GCTCTTC | 1 cut(s) | 1215 |
| PctI | GAATGC | 2 cut(s) | 489, 1105 |
| PfeI | GAWTC | 2 cut(s) | 433, 1241 |
| PleI | GAGTC | 2 cut(s) | 23, 58 |
| PpsI | GAGTC | 2 cut(s) | 23, 58 |
| Ppu21I | YACGTR | 1 cut(s) | 41 |
| PshAI | GACNNNNGTC | 1 cut(s) | 720 |
| PsiI | TTATAA | 1 cut(s) | 773 |
| Psp6I | CCWGG | 4 cut(s) | 91, 477, 885, 1315 |
| PspGI | CCWGG | 4 cut(s) | 91, 477, 885, 1315 |
| PspN4I | GGNNCC | 2 cut(s) | 879, 891 |
| PspPI | GGNCC | 6 cut(s) | 16, 21, 95, 746, 936, 1117 |
| PspXI | VCTCGAGB | 1 cut(s) | 227 |
| PstI | CTGCAG | 1 cut(s) | 847 |
| PstNI | CAGNNNCTG | 2 cut(s) | 833, 1382 |
| PsuI | RGATCY | 2 cut(s) | 877, 889 |
| PvuII | CAGCTG | 3 cut(s) | 830, 953, 968 |
| RsaI | GTAC | 3 cut(s) | 72, 738, 768 |
| RsaNI | GTAC | 3 cut(s) | 71, 737, 767 |
| RseI | CAYNNNNRTG | 1 cut(s) | 494 |
| SapI | GCTCTTC | 1 cut(s) | 1215 |
| SaqAI | TTAA | 3 cut(s) | 573, 614, 1344 |
| Sau3AI | GATC | 9 cut(s) | 182, 196, 240, 324, 421, 877, 889, 1333, 1384 |
| Sau96I | GGNCC | 6 cut(s) | 16, 21, 95, 746, 936, 1117 |
| SchI | GAGTC | 2 cut(s) | 23, 59 |
| ScrFI | CCNGG | 5 cut(s) | 20, 93, 479, 887, 1317 |
| SduI | GDGCHC | 2 cut(s) | 228, 757 |
| SfaNI | GCATC | 5 cut(s) | 255, 301, 526, 964, 1012 |
| SfcI | CTRYAG | 1 cut(s) | 843 |
| Sfr274I | CTCGAG | 1 cut(s) | 227 |
| SinI | GGWCC | 2 cut(s) | 95, 746 |
| SlaI | CTCGAG | 1 cut(s) | 227 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 494 |
| SmlI | CTYRAG | 3 cut(s) | 31, 227, 512 |
| SmoI | CTYRAG | 3 cut(s) | 31, 227, 512 |
| SphI | GCATGC | 2 cut(s) | 444, 448 |
| Sse9I | AATT | 8 cut(s) | 62, 108, 253, 459, 503, 646, 1214, 1268 |
| SsiI | CCGC | 4 cut(s) | 98, 268, 330, 824 |
| SspMI | CTAG | 2 cut(s) | 683, 1205 |
| StyD4I | CCNGG | 5 cut(s) | 18, 91, 477, 885, 1315 |
| StyI | CCWWGG | 2 cut(s) | 219, 378 |
| TaaI | ACNGT | 3 cut(s) | 75, 364, 626 |
| TaiI | ACGT | 1 cut(s) | 43 |
| TaqI | TCGA | 7 cut(s) | 181, 195, 228, 290, 636, 1130, 1162 |
| TasI | AATT | 8 cut(s) | 62, 108, 253, 459, 503, 646, 1214, 1268 |
| TatI | WGTACW | 1 cut(s) | 766 |
| TauI | GCSGC | 1 cut(s) | 827 |
| TfiI | GAWTC | 2 cut(s) | 433, 1241 |
| Tru1I | TTAA | 3 cut(s) | 573, 614, 1344 |
| Tru9I | TTAA | 3 cut(s) | 573, 614, 1344 |
| TscAI | CASTG | 5 cut(s) | 60, 424, 631, 796, 1051 |
| TseFI | GTSAC | 3 cut(s) | 51, 406, 722 |
| Tsp45I | GTSAC | 3 cut(s) | 51, 406, 722 |
| TspDTI | ATGAA | 6 cut(s) | 488, 678, 722, 1002, 1075, 1152 |
| TspGWI | ACGGA | 3 cut(s) | 276, 1049, 1184 |
| TspRI | CASTG | 5 cut(s) | 60, 424, 631, 796, 1051 |
| VpaK11BI | GGWCC | 2 cut(s) | 95, 746 |
| XapI | RAATTY | 1 cut(s) | 62 |
| XceI | RCATGY | 2 cut(s) | 444, 448 |
| XhoI | CTCGAG | 1 cut(s) | 227 |
| XspI | CTAG | 2 cut(s) | 683, 1205 |
| Zsp2I | ATGCAT | 2 cut(s) | 446, 450 |