MD02G1183300.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
16573481 .. 16586693
13213 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1183300.v1.1.491

Sequence Viewer

Length: 1275 bp
ATGGCCATAAGGCCCTCCTTGGAATTCACCGTCTCCCACCACCACAACCTTCTCTCTCTCTTCCTCGCTCGCGGCCACCCTCCGCCGTCTCCTCTCTCCTTCTCCTCCCACCACTTCCACCCTTCCCCGCCGCCTCTCGTCCGCTGCATCGCGTCCTCAGCAACTCCTCTCCCTCACCGCCATACGACCTTTCACCACCCCCCGAGGCCGCTTCATCCTTATCACGAAACCCTGGCGCAGAAGATCTGTAAATCGATTCGCCGCCCTGGCGCCGCCTCCAAGGCTAGGACTTACGCCGATGTCAACGTGATCCGACCCAAGGACTACTGGGACTACGAGTCCCTCACCGTCCAATGGGGGGAGCAGGATGATTATGAGGTGGTGAAGAAGGTTGGGAGAGGAAAGTACAGTGAAGTGTTTGAAGGGATTCACTGTACCGATAACGAAAAATGTATTATCAAGATTCTCAAACCTGTTAAAAAGAAGAAGATTAAGAGGGAGATAAAAATATTGCAGAATCTCTGTGGGGGGCCAAATATTGTGAAGTTGCTTGATATTGTCAGAGATCAGCAATCTAAGACCCCTAGTCTTATATTCGAATATGTGAATAATACAGATTTTAAAGTCCTTTATCCGACACTTTCAGACTTTGACATACGATATTACATCTATGAACTTCTCAAGGCTTTGGATTATTGCCACTCACAAGGTATTATACATCGAGATGTGAAGCCCCATAATGTTATGATTGATCATGAGCAGCGTAAGCTTCGCCTTATTGATTGGGGCCTTGCCGAGTTTTATCATCCTGAGAAGGAATATAATGTTCGGGTTGCTTCAAGGTATTTCAAAGGTCCTGAGCTTCTTGTTGATTTGCAAGATTATGATTATTCTTTAGATTTGTGGAGTCTCGGTTGTATGTTTGCTGGAATGATATTTCGTAAGGAGCCATTCTTCTATGGGCATGATAACTATGATCAGCTAGTCAAAATAGCAAAGGTACTTGGGACAGATGAATTAAAGGCTTATCTGCACAAGTACCGCATAGAATTAGACCCACACCTTGCAGCTCTAGTTGGGAGGCATAGCAGGAAACCATGGACAAAATTCATTAATGTTGATAATCAGCACTTAGCGGTTCCTGAGGCGCTTGACTTTGTAGACAAGTTGTTGCACTATGATCACCAGGAAAGACCAACTGCAAAAGAAGCAATGGCCCATCCTTACTTCTACCCGATCAGAAATGTAGAAAGCAGCAGAACTCGCACCCAGTAG

Protein Analysis

425

Amino Acids

49.58

Weight (kDa)

8.95

Isoelectric Point (pI)

38.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 125 - 410 1.7e-63 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 127 - 324 4e-20 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 269
AccI GTMKAC 1 cut(s) 1161
AccII CGCG 2 cut(s) 72, 152
AclWI GGATC 1 cut(s) 304
AcoI YGGCCR 2 cut(s) 3, 73
AcsI RAATTY 2 cut(s) 23, 1106
AcyI GRCGYC 1 cut(s) 270
AfaI GTAC 4 cut(s) 407, 436, 1002, 1040
AfiI CCNNNNNNNGG 4 cut(s) 285, 319, 354, 358
AgsI TTSAA 3 cut(s) 422, 840, 850
AhdI GACNNNNNGTC 2 cut(s) 337, 585
AjnI CCWGG 3 cut(s) 231, 265, 1185
AluBI AGCT 4 cut(s) 769, 862, 982, 1070
AluI AGCT 4 cut(s) 769, 862, 982, 1070
Alw26I GTCTC 3 cut(s) 37, 93, 914
AlwI GGATC 1 cut(s) 304
Ama87I CYCGRG 1 cut(s) 202
AoxI GGCC 7 cut(s) 3, 11, 73, 206, 530, 787, 1215
ApeKI GCWGC 4 cut(s) 144, 760, 1067, 1254
ApoI RAATTY 2 cut(s) 23, 1106
AseI ATTAAT 1 cut(s) 1113
Asp700I GAANNNNTTC 1 cut(s) 426
AspLEI GCGC 3 cut(s) 238, 272, 1150
AspS9I GGNCC 5 cut(s) 12, 530, 787, 854, 1216
AsuHPI GGTGA 6 cut(s) 19, 167, 185, 337, 394, 1175
AsuII TTCGAA 1 cut(s) 597
AvaI CYCGRG 1 cut(s) 202
AvaII GGWCC 1 cut(s) 854
AxyI CCTNAGG 1 cut(s) 1143
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 269
BbvCI CCTCAGC 1 cut(s) 157
BbvI GCAGC 4 cut(s) 131, 772, 1079, 1266
BccI CCATC 1 cut(s) 1227
BceAI ACGGC 1 cut(s) 70
BciT130I CCWGG 3 cut(s) 233, 267, 1187
BclI TGATCA 3 cut(s) 751, 976, 1180
BcoDI GTCTC 3 cut(s) 37, 93, 914
BfaI CTAG 4 cut(s) 285, 585, 983, 1073
BfoI RGCGCY 2 cut(s) 273, 1151
BglI GCCNNNNNGGC 2 cut(s) 267, 281
BglII AGATCT 1 cut(s) 243
BisI GCNGC 9 cut(s) 73, 131, 145, 209, 262, 273, 761, 1068, 1255
BlsI GCNGC 9 cut(s) 74, 132, 146, 210, 263, 274, 762, 1069, 1256
Bme1390I CCNGG 3 cut(s) 233, 267, 1187
Bme18I GGWCC 1 cut(s) 854
BmeRI GACNNNNNGTC 2 cut(s) 337, 585
BmeT110I CYCGRG 1 cut(s) 202
BmgT120I GGNCC 5 cut(s) 12, 530, 787, 854, 1216
BmiI GGNNCC 5 cut(s) 271, 531, 788, 948, 1140
BmrFI CCNGG 3 cut(s) 233, 267, 1187
BmrI ACTGGG 2 cut(s) 337, 1264
BmsI GCATC 1 cut(s) 156
BmuI ACTGGG 2 cut(s) 337, 1264
Bpu10I CCTNAGC 2 cut(s) 157, 858
Bpu14I TTCGAA 1 cut(s) 597
BpuEI CTTGAG 1 cut(s) 665
Bsa29I ATCGAT 1 cut(s) 254
BsaHI GRCGYC 1 cut(s) 270
BsaJI CCNNGG 7 cut(s) 18, 203, 231, 265, 279, 318, 1097
BsaXI ACNNNNNCTCC 2 cut(s) 898, 928
Bsc4I CCNNNNNNNGG 4 cut(s) 285, 319, 354, 358
Bse1I ACTGG 2 cut(s) 332, 1270
Bse21I CCTNAGG 1 cut(s) 1143
Bse3DI GCAATG 1 cut(s) 1218
BseBI CCWGG 3 cut(s) 233, 267, 1187
BseCI ATCGAT 1 cut(s) 254
BseDI CCNNGG 7 cut(s) 18, 203, 231, 265, 279, 318, 1097
BseGI GGATG 4 cut(s) 214, 373, 805, 1219
BseLI CCNNNNNNNGG 4 cut(s) 285, 319, 354, 358
BseMI GCAATG 1 cut(s) 1218
BseMII CTCAG 4 cut(s) 171, 801, 849, 1134
BseNI ACTGG 2 cut(s) 332, 1270
BseRI GAGGAG 3 cut(s) 81, 94, 156
BseXI GCAGC 4 cut(s) 131, 772, 1079, 1266
BsgI GTGCAG 1 cut(s) 1016
Bsh1236I CGCG 2 cut(s) 72, 152
BshFI GGCC 7 cut(s) 5, 13, 75, 208, 532, 789, 1217
BshNI GGYRCC 1 cut(s) 269
BshVI ATCGAT 1 cut(s) 254
BsiHKCI CYCGRG 1 cut(s) 202
BslFI GGGAC 3 cut(s) 325, 344, 1021
BslI CCNNNNNNNGG 4 cut(s) 285, 319, 354, 358
BsmAI GTCTC 3 cut(s) 37, 93, 914
BsmBI CGTCTC 2 cut(s) 37, 93
BsmFI GGGAC 3 cut(s) 325, 344, 1021
BsnI GGCC 7 cut(s) 5, 13, 75, 208, 532, 789, 1217
BsoBI CYCGRG 1 cut(s) 202
Bsp119I TTCGAA 1 cut(s) 597
Bsp143I GATC 7 cut(s) 243, 309, 565, 751, 976, 1180, 1236
Bsp19I CCATGG 1 cut(s) 1097
BspANI GGCC 7 cut(s) 5, 13, 75, 208, 532, 789, 1217
BspCNI CTCAG 4 cut(s) 170, 802, 850, 1135
BspDI ATCGAT 1 cut(s) 254
BspFNI CGCG 2 cut(s) 72, 152
BspHI TCATGA 1 cut(s) 754
BspLI GGNNCC 5 cut(s) 271, 531, 788, 948, 1140
BspPI GGATC 1 cut(s) 304
BspT104I TTCGAA 1 cut(s) 597
BspT107I GGYRCC 1 cut(s) 269
BsrDI GCAATG 1 cut(s) 1218
BsrI ACTGG 2 cut(s) 332, 1270
BssECI CCNNGG 7 cut(s) 18, 203, 231, 265, 279, 318, 1097
BssMI GATC 7 cut(s) 243, 309, 565, 751, 976, 1180, 1236
BssNI GRCGYC 1 cut(s) 270
BssT1I CCWWGG 4 cut(s) 18, 279, 318, 1097
Bst2UI CCWGG 3 cut(s) 233, 267, 1187
Bst4CI ACNGT 4 cut(s) 31, 349, 410, 434
Bst6I CTCTTC 1 cut(s) 65
BstACI GRCGYC 1 cut(s) 270
BstBI TTCGAA 1 cut(s) 597
BstC8I GCNNGC 1 cut(s) 70
BstDEI CTNAG 6 cut(s) 157, 576, 810, 858, 1132, 1143
BstDSI CCRYGG 1 cut(s) 1097
BstF5I GGATG 4 cut(s) 214, 373, 805, 1219
BstFNI CGCG 2 cut(s) 72, 152
BstH2I RGCGCY 2 cut(s) 273, 1151
BstHHI GCGC 3 cut(s) 238, 272, 1150
BstKTI GATC 7 cut(s) 246, 312, 568, 754, 979, 1183, 1239
BstMAI GTCTC 3 cut(s) 37, 93, 914
BstMBI GATC 7 cut(s) 243, 309, 565, 751, 976, 1180, 1236
BstMWI GCNNNNNNNGC 6 cut(s) 158, 267, 281, 766, 1208, 1263
BstNI CCWGG 3 cut(s) 233, 267, 1187
BstSCI CCNGG 3 cut(s) 231, 265, 1185
BstUI CGCG 2 cut(s) 72, 152
BstV1I GCAGC 4 cut(s) 131, 772, 1079, 1266
BstX2I RGATCY 1 cut(s) 243
BstYI RGATCY 1 cut(s) 243
Bsu15I ATCGAT 1 cut(s) 254
Bsu36I CCTNAGG 1 cut(s) 1143
BsuRI GGCC 7 cut(s) 5, 13, 75, 208, 532, 789, 1217
BsuTUI ATCGAT 1 cut(s) 254
BtgI CCRYGG 1 cut(s) 1097
BtgZI GCGATG 1 cut(s) 133
BtsCI GGATG 4 cut(s) 214, 373, 805, 1219
BtsIMutI CAGTG 2 cut(s) 415, 430
Cac8I GCNNGC 1 cut(s) 70
CciI TCATGA 1 cut(s) 754
CfoI GCGC 3 cut(s) 238, 272, 1150
Cfr13I GGNCC 5 cut(s) 12, 530, 787, 854, 1216
ClaI ATCGAT 1 cut(s) 254
CseI GACGC 1 cut(s) 141
Csp6I GTAC 4 cut(s) 406, 435, 1001, 1039
CviAII CATG 3 cut(s) 755, 965, 1098
CviQI GTAC 4 cut(s) 406, 435, 1001, 1039
DdeI CTNAG 6 cut(s) 157, 576, 810, 858, 1132, 1143
DinI GGCGCC 1 cut(s) 271
DpnI GATC 7 cut(s) 245, 311, 567, 753, 978, 1182, 1238
DpnII GATC 7 cut(s) 243, 309, 565, 751, 976, 1180, 1236
DraI TTTAAA 1 cut(s) 622
DriI GACNNNNNGTC 2 cut(s) 337, 585
EaeI YGGCCR 2 cut(s) 3, 73
Eam1104I CTCTTC 1 cut(s) 65
Eam1105I GACNNNNNGTC 2 cut(s) 337, 585
EarI CTCTTC 1 cut(s) 65
EciI GGCGGA 1 cut(s) 72
Eco130I CCWWGG 4 cut(s) 18, 279, 318, 1097
Eco47I GGWCC 1 cut(s) 854
Eco81I CCTNAGG 1 cut(s) 1143
Eco88I CYCGRG 1 cut(s) 202
EcoO109I RGGNCCY 3 cut(s) 12, 787, 854
EcoRI GAATTC 1 cut(s) 23
EcoRII CCWGG 3 cut(s) 231, 265, 1185
EcoT14I CCWWGG 4 cut(s) 18, 279, 318, 1097
EgeI GGCGCC 1 cut(s) 271
EheI GGCGCC 1 cut(s) 271
ErhI CCWWGG 4 cut(s) 18, 279, 318, 1097
Esp3I CGTCTC 2 cut(s) 37, 93
FaeI CATG 3 cut(s) 758, 968, 1101
FaqI GGGAC 3 cut(s) 325, 344, 1021
FatI CATG 3 cut(s) 754, 964, 1097
FauI CCCGC 1 cut(s) 135
FbaI TGATCA 3 cut(s) 751, 976, 1180
FblI GTMKAC 1 cut(s) 1161
Fnu4HI GCNGC 9 cut(s) 73, 131, 145, 209, 262, 273, 761, 1068, 1255
FokI GGATG 4 cut(s) 201, 380, 792, 1206
Fsp4HI GCNGC 9 cut(s) 73, 131, 145, 209, 262, 273, 761, 1068, 1255
FspBI CTAG 4 cut(s) 285, 585, 983, 1073
GlaI GCGC 3 cut(s) 237, 271, 1149
GluI GCNGC 9 cut(s) 73, 131, 145, 209, 262, 273, 761, 1068, 1255
HaeII RGCGCY 2 cut(s) 273, 1151
HaeIII GGCC 7 cut(s) 5, 13, 75, 208, 532, 789, 1217
HgaI GACGC 1 cut(s) 141
HhaI GCGC 3 cut(s) 238, 272, 1150
Hin1I GRCGYC 1 cut(s) 270
Hin1II CATG 3 cut(s) 758, 968, 1101
Hin6I GCGC 3 cut(s) 236, 270, 1148
HinP1I GCGC 3 cut(s) 236, 270, 1148
HincII GTYRAC 1 cut(s) 304
HindII GTYRAC 1 cut(s) 304
HindIII AAGCTT 1 cut(s) 767
HinfI GANTC 6 cut(s) 256, 338, 427, 463, 517, 907
HphI GGTGA 6 cut(s) 19, 167, 185, 337, 394, 1175
Hpy166II GTNNAC 2 cut(s) 304, 1162
Hpy188I TCNGA 5 cut(s) 314, 563, 636, 646, 1241
Hpy188III TCNNGA 7 cut(s) 224, 460, 722, 755, 809, 857, 1142
Hpy8I GTNNAC 2 cut(s) 304, 1162
HpyAV CCTTC 6 cut(s) 59, 109, 132, 382, 416, 808
HpyCH4III ACNGT 4 cut(s) 31, 349, 410, 434
HpyCH4IV ACGT 1 cut(s) 306
HpyCH4V TGCA 7 cut(s) 147, 514, 877, 1033, 1067, 1174, 1202
HpyF10VI GCNNNNNNNGC 6 cut(s) 158, 267, 281, 766, 1208, 1263
HpyF3I CTNAG 6 cut(s) 157, 576, 810, 858, 1132, 1143
HpySE526I ACGT 1 cut(s) 306
Hsp92I GRCGYC 1 cut(s) 270
Hsp92II CATG 3 cut(s) 758, 968, 1101
HspAI GCGC 3 cut(s) 236, 270, 1148
KasI GGCGCC 1 cut(s) 269
Ksp22I TGATCA 3 cut(s) 751, 976, 1180
Kzo9I GATC 7 cut(s) 243, 309, 565, 751, 976, 1180, 1236
LmnI GCTCC 2 cut(s) 361, 946
Lsp1109I GCAGC 4 cut(s) 131, 772, 1079, 1266
LweI GCATC 1 cut(s) 156
MaeI CTAG 4 cut(s) 285, 585, 983, 1073
MaeII ACGT 1 cut(s) 306
MalI GATC 7 cut(s) 245, 311, 567, 753, 978, 1182, 1238
MboI GATC 7 cut(s) 243, 309, 565, 751, 976, 1180, 1236
MboII GAAGA 6 cut(s) 52, 253, 397, 496, 499, 946
MflI RGATCY 1 cut(s) 243
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 23, 1016, 1049, 1106
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 270
MlyI GAGTC 2 cut(s) 347, 916
MmeI TCCRAC 2 cut(s) 337, 659
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 426
MscI TGGCCA 1 cut(s) 5
MseI TTAA 5 cut(s) 477, 492, 621, 1019, 1113
MslI CAYNNNNRTG 1 cut(s) 723
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 144
MspR9I CCNGG 3 cut(s) 233, 267, 1187
MvaI CCWGG 3 cut(s) 233, 267, 1187
MvnI CGCG 2 cut(s) 72, 152
MwoI GCNNNNNNNGC 6 cut(s) 158, 267, 281, 766, 1208, 1263
NarI GGCGCC 1 cut(s) 270
NcoI CCATGG 1 cut(s) 1097
NdeII GATC 7 cut(s) 243, 309, 565, 751, 976, 1180, 1236
NlaIII CATG 3 cut(s) 758, 968, 1101
NlaIV GGNNCC 5 cut(s) 271, 531, 788, 948, 1140
NmeAIII GCCGAG 1 cut(s) 820
NspV TTCGAA 1 cut(s) 597
PagI TCATGA 1 cut(s) 754
PdmI GAANNNNTTC 1 cut(s) 426
PfeI GAWTC 4 cut(s) 256, 427, 463, 517
PkrI GCNGC 9 cut(s) 74, 132, 146, 210, 263, 274, 762, 1069, 1256
PleI GAGTC 2 cut(s) 346, 915
PluTI GGCGCC 1 cut(s) 273
PpsI GAGTC 2 cut(s) 346, 915
PpuMI RGGWCCY 1 cut(s) 854
PshBI ATTAAT 1 cut(s) 1113
Psp5II RGGWCCY 1 cut(s) 854
Psp6I CCWGG 3 cut(s) 231, 265, 1185
PspGI CCWGG 3 cut(s) 231, 265, 1185
PspN4I GGNNCC 5 cut(s) 271, 531, 788, 948, 1140
PspPI GGNCC 5 cut(s) 12, 530, 787, 854, 1216
PspPPI RGGWCCY 1 cut(s) 854
PsuI RGATCY 1 cut(s) 243
RsaI GTAC 4 cut(s) 407, 436, 1002, 1040
RsaNI GTAC 4 cut(s) 406, 435, 1001, 1039
RseI CAYNNNNRTG 1 cut(s) 723
SaqAI TTAA 5 cut(s) 477, 492, 621, 1019, 1113
SatI GCNGC 9 cut(s) 73, 131, 145, 209, 262, 273, 761, 1068, 1255
Sau3AI GATC 7 cut(s) 243, 309, 565, 751, 976, 1180, 1236
Sau96I GGNCC 5 cut(s) 12, 530, 787, 854, 1216
SchI GAGTC 2 cut(s) 347, 916
ScrFI CCNGG 3 cut(s) 233, 267, 1187
SfaNI GCATC 1 cut(s) 156
SfoI GGCGCC 1 cut(s) 271
SfuI TTCGAA 1 cut(s) 597
SinI GGWCC 1 cut(s) 854
SmiMI CAYNNNNRTG 1 cut(s) 723
SmlI CTYRAG 1 cut(s) 680
SmoI CTYRAG 1 cut(s) 680
Sse9I AATT 4 cut(s) 23, 1016, 1049, 1106
SspDI GGCGCC 1 cut(s) 269
SspI AATATT 2 cut(s) 510, 538
SspMI CTAG 4 cut(s) 285, 585, 983, 1073
StyD4I CCNGG 3 cut(s) 231, 265, 1185
StyI CCWWGG 4 cut(s) 18, 279, 318, 1097
TaaI ACNGT 4 cut(s) 31, 349, 410, 434
TaiI ACGT 1 cut(s) 309
TaqI TCGA 3 cut(s) 254, 597, 721
TasI AATT 4 cut(s) 23, 1016, 1049, 1106
TatI WGTACW 1 cut(s) 405
TauI GCSGC 5 cut(s) 75, 133, 211, 264, 275
TfiI GAWTC 4 cut(s) 256, 427, 463, 517
Tru1I TTAA 5 cut(s) 477, 492, 621, 1019, 1113
Tru9I TTAA 5 cut(s) 477, 492, 621, 1019, 1113
TscAI CASTG 2 cut(s) 415, 437
TseI GCWGC 4 cut(s) 144, 760, 1067, 1254
TspDTI ATGAA 4 cut(s) 203, 687, 1029, 1099
TspRI CASTG 2 cut(s) 415, 437
VpaK11BI GGWCC 1 cut(s) 854
VspI ATTAAT 1 cut(s) 1113
XapI RAATTY 2 cut(s) 23, 1106
XmiI GTMKAC 1 cut(s) 1161
XmnI GAANNNNTTC 1 cut(s) 426
XspI CTAG 4 cut(s) 285, 585, 983, 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.