Rroxscaffold_6G00412260

UDP-glycosyltransferase 72E1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
34884766 .. 34885071
306 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_6G00412260.1

Sequence Viewer

Length: 225 bp
ATGTCTGGGGTGGCGGGAACGAAATACTGCTATCTTTCGTGGCCAGGAGGATCTGAAAACTTCCAATCAGAGTTGGCTTATGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTGGCGAGACCTCCCAGAGTCGATGGTGCTTCGGGAAGCTTCTTCAAAGCTGGTGTTGATGGTGCCCTTACGGCGTCGTATCTGCCGGATGGGTTTTCAGAGCGGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

74

Amino Acids

7.92

Weight (kDa)

6.11

Isoelectric Point (pI)

29.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 176
AccBSI CCGCTC 1 cut(s) 217
AciI CCGC 2 cut(s) 14, 217
AclWI GGATC 1 cut(s) 58
AcoI YGGCCR 1 cut(s) 41
AcyI GRCGYC 1 cut(s) 188
AfiI CCNNNNNNNGG 1 cut(s) 115
AgsI TTSAA 1 cut(s) 160
AjnI CCWGG 1 cut(s) 43
AluBI AGCT 3 cut(s) 91, 153, 164
AluI AGCT 3 cut(s) 91, 153, 164
Alw26I GTCTC 1 cut(s) 115
AlwI GGATC 1 cut(s) 58
AoxI GGCC 1 cut(s) 41
BaeGI GKGCMC 1 cut(s) 181
BalI TGGCCA 1 cut(s) 43
BanI GGYRCC 1 cut(s) 176
BccI CCATC 3 cut(s) 131, 167, 197
BceAI ACGGC 1 cut(s) 201
BciT130I CCWGG 1 cut(s) 45
BcoDI GTCTC 1 cut(s) 115
BglI GCCNNNNNGGC 1 cut(s) 185
Bme1390I CCNGG 1 cut(s) 45
BmiI GGNNCC 1 cut(s) 178
BmrFI CCNGG 1 cut(s) 45
BsaHI GRCGYC 1 cut(s) 188
BsaI GGTCTC 1 cut(s) 115
Bsc4I CCNNNNNNNGG 1 cut(s) 115
BseBI CCWGG 1 cut(s) 45
BseGI GGATG 1 cut(s) 208
BseLI CCNNNNNNNGG 1 cut(s) 115
BseMII CTCAG 1 cut(s) 83
BseSI GKGCMC 1 cut(s) 181
BshFI GGCC 1 cut(s) 43
BshNI GGYRCC 1 cut(s) 176
BsiSI CCGG 1 cut(s) 200
BslI CCNNNNNNNGG 1 cut(s) 115
BsmAI GTCTC 1 cut(s) 115
BsnI GGCC 1 cut(s) 43
Bso31I GGTCTC 1 cut(s) 115
Bsp1286I GDGCHC 1 cut(s) 181
Bsp143I GATC 1 cut(s) 50
BspACI CCGC 2 cut(s) 14, 217
BspANI GGCC 1 cut(s) 43
BspCNI CTCAG 1 cut(s) 84
BspLI GGNNCC 1 cut(s) 178
BspPI GGATC 1 cut(s) 58
BspT107I GGYRCC 1 cut(s) 176
BspTNI GGTCTC 1 cut(s) 115
BsrBI CCGCTC 1 cut(s) 217
BssMI GATC 1 cut(s) 50
BssNI GRCGYC 1 cut(s) 188
Bst2UI CCWGG 1 cut(s) 45
BstACI GRCGYC 1 cut(s) 188
BstDEI CTNAG 1 cut(s) 92
BstF5I GGATG 1 cut(s) 208
BstKTI GATC 1 cut(s) 53
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 1 cut(s) 50
BstMWI GCNNNNNNNGC 1 cut(s) 185
BstNI CCWGG 1 cut(s) 45
BstSCI CCNGG 1 cut(s) 43
BstSLI GKGCMC 1 cut(s) 181
BstX2I RGATCY 1 cut(s) 50
BstYI RGATCY 1 cut(s) 50
BsuRI GGCC 1 cut(s) 43
BtsCI GGATG 1 cut(s) 208
CseI GACGC 1 cut(s) 177
CviAII CATG 1 cut(s) 222
CviJI RGCY 5 cut(s) 43, 77, 91, 153, 164
CviKI_1 RGCY 5 cut(s) 43, 77, 91, 153, 164
DdeI CTNAG 1 cut(s) 92
DpnI GATC 1 cut(s) 52
DpnII GATC 1 cut(s) 50
EaeI YGGCCR 1 cut(s) 41
Eco31I GGTCTC 1 cut(s) 115
EcoRII CCWGG 1 cut(s) 43
FaeI CATG 1 cut(s) 225
FaiI YATR 2 cut(s) 81, 223
FatI CATG 1 cut(s) 221
FauI CCCGC 1 cut(s) 7
FokI GGATG 1 cut(s) 215
HaeIII GGCC 1 cut(s) 43
HapII CCGG 1 cut(s) 200
HgaI GACGC 1 cut(s) 177
Hin1I GRCGYC 1 cut(s) 188
Hin1II CATG 1 cut(s) 225
HindIII AAGCTT 1 cut(s) 151
HinfI GANTC 2 cut(s) 105, 132
HpaII CCGG 1 cut(s) 200
Hpy188I TCNGA 3 cut(s) 55, 70, 214
Hpy188III TCNNGA 1 cut(s) 147
Hpy99I CGWCG 1 cut(s) 193
HpyF10VI GCNNNNNNNGC 1 cut(s) 185
HpyF3I CTNAG 1 cut(s) 92
Hsp92I GRCGYC 1 cut(s) 188
Hsp92II CATG 1 cut(s) 225
Kzo9I GATC 1 cut(s) 50
LmnI GCTCC 1 cut(s) 88
LpnPI CCDG 6 cut(s) 30, 57, 97, 142, 150, 213
MalI GATC 1 cut(s) 52
MbiI CCGCTC 1 cut(s) 217
MboI GATC 1 cut(s) 50
MboII GAAGA 1 cut(s) 148
MflI RGATCY 1 cut(s) 50
MhlI GDGCHC 1 cut(s) 181
MlsI TGGCCA 1 cut(s) 43
MluNI TGGCCA 1 cut(s) 43
MlyI GAGTC 1 cut(s) 141
MmeI TCCRAC 1 cut(s) 66
MnlI CCTC 3 cut(s) 41, 119, 135
Mox20I TGGCCA 1 cut(s) 43
MscI TGGCCA 1 cut(s) 43
Msp20I TGGCCA 1 cut(s) 43
MspI CCGG 1 cut(s) 200
MspR9I CCNGG 1 cut(s) 45
MvaI CCWGG 1 cut(s) 45
MwoI GCNNNNNNNGC 1 cut(s) 185
NdeII GATC 1 cut(s) 50
NlaIII CATG 1 cut(s) 225
NlaIV GGNNCC 1 cut(s) 178
PfeI GAWTC 1 cut(s) 105
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
Psp6I CCWGG 1 cut(s) 43
PspGI CCWGG 1 cut(s) 43
PspN4I GGNNCC 1 cut(s) 178
PsuI RGATCY 1 cut(s) 50
Sau3AI GATC 1 cut(s) 50
SchI GAGTC 1 cut(s) 141
ScrFI CCNGG 1 cut(s) 45
SduI GDGCHC 1 cut(s) 181
SetI ASST 4 cut(s) 93, 127, 155, 166
SsiI CCGC 2 cut(s) 14, 217
StyD4I CCNGG 1 cut(s) 43
TaqI TCGA 1 cut(s) 135
TfiI GAWTC 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.