Rh5CG247100

UDP-glycosyltransferase 72E1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0002706
Physical Location & Seq
Forward (+)
26015680 .. 26017851
2172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG247100.1

Sequence Viewer

Length: 291 bp
ATGACTGGTATATGGATCTCTCCTTCCTTTCCTACTGCGAGATCTGAAAACTTCCAATCAGAATTGGCTCGTGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTGGCGAGACCTCCCAGAGCCGATGGTGCTTCTGGAAGATTCTTCGAAGCTGGTGTTGATGGTGCCCTTACGGCGTCGTATCTATCGGATGGGTTTTCGGAGAGGACACGAGGGGCAGGGCTGGTGACGGCGATGTGTACGGCCGACTTTGCCCTATTTTACTTGTGTGTGGGTGATGATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
UDPGT

Protein Analysis

96

Amino Acids

10.35

Weight (kDa)

4.84

Isoelectric Point (pI)

33.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 167
AclWI GGATC 1 cut(s) 23
AcoI YGGCCR 1 cut(s) 246
AcyI GRCGYC 1 cut(s) 179
AfaI GTAC 1 cut(s) 244
AfiI CCNNNNNNNGG 1 cut(s) 106
AluBI AGCT 2 cut(s) 82, 155
AluI AGCT 2 cut(s) 82, 155
Alw26I GTCTC 1 cut(s) 106
AlwI GGATC 1 cut(s) 23
AoxI GGCC 1 cut(s) 246
AsuHPI GGTGA 2 cut(s) 241, 290
AsuII TTCGAA 1 cut(s) 150
BaeGI GKGCMC 1 cut(s) 172
BanI GGYRCC 1 cut(s) 167
BauI CACGAG 2 cut(s) 69, 213
BccI CCATC 3 cut(s) 122, 158, 188
BceAI ACGGC 3 cut(s) 192, 249, 261
BcoDI GTCTC 1 cut(s) 106
BglI GCCNNNNNGGC 1 cut(s) 176
BglII AGATCT 1 cut(s) 41
BmiI GGNNCC 1 cut(s) 169
Bpu14I TTCGAA 1 cut(s) 150
BsaHI GRCGYC 1 cut(s) 179
BsaI GGTCTC 1 cut(s) 106
Bsc4I CCNNNNNNNGG 1 cut(s) 106
Bse1I ACTGG 1 cut(s) 10
BseGI GGATG 1 cut(s) 199
BseLI CCNNNNNNNGG 1 cut(s) 106
BseMII CTCAG 1 cut(s) 74
BseNI ACTGG 1 cut(s) 10
BseSI GKGCMC 1 cut(s) 172
BseX3I CGGCCG 1 cut(s) 246
Bsh1285I CGRYCG 1 cut(s) 249
BshFI GGCC 1 cut(s) 248
BshNI GGYRCC 1 cut(s) 167
BsiEI CGRYCG 1 cut(s) 249
BslI CCNNNNNNNGG 1 cut(s) 106
BsmAI GTCTC 1 cut(s) 106
BsnI GGCC 1 cut(s) 248
Bso31I GGTCTC 1 cut(s) 106
Bsp119I TTCGAA 1 cut(s) 150
Bsp1286I GDGCHC 1 cut(s) 172
Bsp143I GATC 2 cut(s) 15, 41
BspANI GGCC 1 cut(s) 248
BspCNI CTCAG 1 cut(s) 75
BspLI GGNNCC 1 cut(s) 169
BspPI GGATC 1 cut(s) 23
BspT104I TTCGAA 1 cut(s) 150
BspT107I GGYRCC 1 cut(s) 167
BspTNI GGTCTC 1 cut(s) 106
BsrI ACTGG 1 cut(s) 10
BssMI GATC 2 cut(s) 15, 41
BssNI GRCGYC 1 cut(s) 179
BssSI CACGAG 2 cut(s) 69, 213
Bst2BI CACGAG 2 cut(s) 69, 213
BstACI GRCGYC 1 cut(s) 179
BstBI TTCGAA 1 cut(s) 150
BstDEI CTNAG 1 cut(s) 83
BstF5I GGATG 1 cut(s) 199
BstKTI GATC 2 cut(s) 18, 44
BstMAI GTCTC 1 cut(s) 106
BstMBI GATC 2 cut(s) 15, 41
BstMCI CGRYCG 1 cut(s) 249
BstMWI GCNNNNNNNGC 3 cut(s) 131, 176, 254
BstSLI GKGCMC 1 cut(s) 172
BstX2I RGATCY 2 cut(s) 15, 41
BstYI RGATCY 2 cut(s) 15, 41
BstZI CGGCCG 1 cut(s) 246
BsuRI GGCC 1 cut(s) 248
BtgZI GCGATG 1 cut(s) 251
BtsCI GGATG 1 cut(s) 199
CseI GACGC 1 cut(s) 168
Csp6I GTAC 1 cut(s) 243
CviJI RGCY 6 cut(s) 68, 82, 125, 155, 226, 248
CviKI_1 RGCY 6 cut(s) 68, 82, 125, 155, 226, 248
CviQI GTAC 1 cut(s) 243
DdeI CTNAG 1 cut(s) 83
DpnI GATC 2 cut(s) 17, 43
DpnII GATC 2 cut(s) 15, 41
EaeI YGGCCR 1 cut(s) 246
EagI CGGCCG 1 cut(s) 246
EclXI CGGCCG 1 cut(s) 246
Eco31I GGTCTC 1 cut(s) 106
Eco52I CGGCCG 1 cut(s) 246
FaiI YATR 2 cut(s) 11, 13
FokI GGATG 1 cut(s) 206
HaeIII GGCC 1 cut(s) 248
HgaI GACGC 1 cut(s) 168
Hin1I GRCGYC 1 cut(s) 179
HinfI GANTC 2 cut(s) 96, 144
HphI GGTGA 2 cut(s) 241, 290
Hpy166II GTNNAC 1 cut(s) 243
Hpy188I TCNGA 4 cut(s) 46, 61, 193, 205
Hpy188III TCNNGA 1 cut(s) 138
Hpy8I GTNNAC 1 cut(s) 243
Hpy99I CGWCG 1 cut(s) 184
HpyAV CCTTC 1 cut(s) 33
HpyF10VI GCNNNNNNNGC 3 cut(s) 131, 176, 254
HpyF3I CTNAG 1 cut(s) 83
Hsp92I GRCGYC 1 cut(s) 179
Kzo9I GATC 2 cut(s) 15, 41
LmnI GCTCC 1 cut(s) 79
LpnPI CCDG 6 cut(s) 88, 123, 133, 141, 207, 212
MaeIII GTNAC 1 cut(s) 229
MalI GATC 2 cut(s) 17, 43
MboI GATC 2 cut(s) 15, 41
MboII GAAGA 2 cut(s) 139, 153
MflI RGATCY 2 cut(s) 15, 41
MhlI GDGCHC 1 cut(s) 172
MluCI AATT 1 cut(s) 62
MmeI TCCRAC 1 cut(s) 57
MnlI CCTC 4 cut(s) 110, 126, 201, 209
MwoI GCNNNNNNNGC 3 cut(s) 131, 176, 254
NdeII GATC 2 cut(s) 15, 41
NlaIV GGNNCC 1 cut(s) 169
NmuCI GTSAC 1 cut(s) 229
NspV TTCGAA 1 cut(s) 150
PfeI GAWTC 2 cut(s) 96, 144
PspN4I GGNNCC 1 cut(s) 169
PsuI RGATCY 2 cut(s) 15, 41
RsaI GTAC 1 cut(s) 244
RsaNI GTAC 1 cut(s) 243
Sau3AI GATC 2 cut(s) 15, 41
SduI GDGCHC 1 cut(s) 172
SetI ASST 3 cut(s) 84, 118, 157
SfuI TTCGAA 1 cut(s) 150
Sse9I AATT 1 cut(s) 62
TaqI TCGA 1 cut(s) 150
TasI AATT 1 cut(s) 62
TfiI GAWTC 2 cut(s) 96, 144
TseFI GTSAC 1 cut(s) 229
Tsp45I GTSAC 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.