Rroxscaffold_2G00122390

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
55462442 .. 55465950
3509 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_2G00122390.1

Sequence Viewer

Length: 195 bp
ATGAGTCTCAAGCTAGGTTGCATGATGAAAATGAAGGTCTCTTCAGAGTTTGGTATATTCACAGAGAAAGCATCTTTGGCTGCACCACCGCAGATATTTTGTAAGGAGCCATTCTTCAATGGACATGATAACTACGATCAGCTGGTGAAACTAGCAAAGGAGGCTTGCAACAACACTAGAGTAATTGGTACGTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

64

Amino Acids

7.13

Weight (kDa)

8.54

Isoelectric Point (pI)

49.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 89
AcuI CTGAAG 1 cut(s) 27
AfaI GTAC 1 cut(s) 190
AgsI TTSAA 1 cut(s) 118
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AluBI AGCT 2 cut(s) 13, 142
AluI AGCT 2 cut(s) 13, 142
Alw26I GTCTC 2 cut(s) 11, 43
ApeKI GCWGC 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 157
BbvI GCAGC 1 cut(s) 67
BcoDI GTCTC 2 cut(s) 11, 43
BfaI CTAG 3 cut(s) 14, 152, 177
BisI GCNGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 82
BmiI GGNNCC 1 cut(s) 108
BmsI GCATC 1 cut(s) 80
BsaAI YACGTR 1 cut(s) 192
BsaI GGTCTC 1 cut(s) 43
BseXI GCAGC 1 cut(s) 67
BsgI GTGCAG 1 cut(s) 66
BsmAI GTCTC 2 cut(s) 11, 43
Bso31I GGTCTC 1 cut(s) 43
Bsp143I GATC 1 cut(s) 136
BspACI CCGC 1 cut(s) 89
BspLI GGNNCC 1 cut(s) 108
BspTNI GGTCTC 1 cut(s) 43
BssMI GATC 1 cut(s) 136
Bst6I CTCTTC 1 cut(s) 46
BstBAI YACGTR 1 cut(s) 192
BstC8I GCNNGC 1 cut(s) 166
BstKTI GATC 1 cut(s) 139
BstMAI GTCTC 2 cut(s) 11, 43
BstMBI GATC 1 cut(s) 136
BstMWI GCNNNNNNNGC 2 cut(s) 77, 161
BstV1I GCAGC 1 cut(s) 67
Cac8I GCNNGC 1 cut(s) 166
Csp6I GTAC 1 cut(s) 189
CviAII CATG 2 cut(s) 22, 125
CviJI RGCY 5 cut(s) 13, 80, 109, 142, 164
CviKI_1 RGCY 5 cut(s) 13, 80, 109, 142, 164
CviQI GTAC 1 cut(s) 189
DpnI GATC 1 cut(s) 138
DpnII GATC 1 cut(s) 136
Eam1104I CTCTTC 1 cut(s) 46
EarI CTCTTC 1 cut(s) 46
Eco31I GGTCTC 1 cut(s) 43
Eco57I CTGAAG 1 cut(s) 27
FaeI CATG 2 cut(s) 25, 128
FaiI YATR 3 cut(s) 23, 56, 126
FatI CATG 2 cut(s) 21, 124
Fnu4HI GCNGC 1 cut(s) 81
Fsp4HI GCNGC 1 cut(s) 81
FspBI CTAG 3 cut(s) 14, 152, 177
GluI GCNGC 1 cut(s) 81
Hin1II CATG 2 cut(s) 25, 128
HinfI GANTC 1 cut(s) 4
HphI GGTGA 1 cut(s) 157
Hpy188I TCNGA 1 cut(s) 46
HpyAV CCTTC 1 cut(s) 28
HpyCH4IV ACGT 1 cut(s) 191
HpyCH4V TGCA 3 cut(s) 21, 83, 168
HpyF10VI GCNNNNNNNGC 2 cut(s) 77, 161
HpySE526I ACGT 1 cut(s) 191
Hsp92II CATG 2 cut(s) 25, 128
Kzo9I GATC 1 cut(s) 136
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 1 cut(s) 128
Lsp1109I GCAGC 1 cut(s) 67
LweI GCATC 1 cut(s) 80
MaeI CTAG 3 cut(s) 14, 152, 177
MaeII ACGT 1 cut(s) 191
MalI GATC 1 cut(s) 138
MboI GATC 1 cut(s) 136
MboII GAAGA 2 cut(s) 33, 106
MluCI AATT 1 cut(s) 183
MlyI GAGTC 1 cut(s) 13
MnlI CCTC 1 cut(s) 154
MspA1I CMGCKG 1 cut(s) 142
MwoI GCNNNNNNNGC 2 cut(s) 77, 161
NdeII GATC 1 cut(s) 136
NlaIII CATG 2 cut(s) 25, 128
NlaIV GGNNCC 1 cut(s) 108
PkrI GCNGC 1 cut(s) 82
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
Ppu21I YACGTR 1 cut(s) 192
PspN4I GGNNCC 1 cut(s) 108
PvuII CAGCTG 1 cut(s) 142
RsaI GTAC 1 cut(s) 190
RsaNI GTAC 1 cut(s) 189
SatI GCNGC 1 cut(s) 81
Sau3AI GATC 1 cut(s) 136
SchI GAGTC 1 cut(s) 13
SetI ASST 5 cut(s) 15, 19, 39, 144, 194
SfaNI GCATC 1 cut(s) 80
SgeI CNNG 8 cut(s) 22, 26, 34, 137, 155, 164, 177, 189
SmlI CTYRAG 1 cut(s) 8
SmoI CTYRAG 1 cut(s) 8
Sse9I AATT 1 cut(s) 183
SsiI CCGC 1 cut(s) 89
SspMI CTAG 3 cut(s) 14, 152, 177
TaiI ACGT 1 cut(s) 194
TasI AATT 1 cut(s) 183
TseI GCWGC 1 cut(s) 80
TspDTI ATGAA 2 cut(s) 41, 47
XspI CTAG 3 cut(s) 14, 152, 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.