Rh2BG207800
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
19292017 .. 19297404
5388 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG207800.1

Sequence Viewer

Length: 1074 bp
ATGGCCATAAGGCCCTGCTTGGAATTCACCGTCTCCAACCACCACAAGCTCCTCTCTCGATTCCTCAACCGCCCTTCTTCCTCCTCCTTTCTCCCTCTTCCGGCCTCTCACTCCAAGCCGCTCTTCCCGCTCCTCCGCCGCATCGCTTCGTCGGCGACTCCGGTCACGCGCCCAAACCCTCACCGCCCTCAGCGGCCGCTCTACCCGCCCACCGAAACCCTGGCGCAGAAGATCTGTAAATCGATTCGCCGCCCCGGCGCCGCCTCCAAGGCCCGGATATACTCCGATGTCAACGTCATCCGCCCCAAGGAGTACTGGGACTACGAAGCCCTCACCGTCCAATGGGGAGAGCAGGACGATTACGAGGTGGTGAGGAAGGTTGGGAGAGGAAAATACAGTGAGGTGTTTGAGGGGGTTCACTGTACGGATAACGAGAAATGTATCATCAAGATTCTCAAGCCTGTTAAAAAGAAGAAGATTAAGAGGGAGATTAAAATATTGCAAAATCTTTGTGGAGGCCCGAATATTGTGAAGTTGCTTGATATCGTCAGAGACCAGCAATCAAAGACGCCAAGTCTTATTTTTGAATATGTGAATAATACAGATTTTAAAGTTCTGTATCCAACACTTTCAGACTATGACATACGATACTATATCTATGAACTTCTCAAGGCTTTGGATTATTGCCACTCGCAAGGTATTATGCATCGAGATGTGAAACCCCATAATGTTATGATCGATCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGCCTTGCAGAGTTCTACCATCCTGAGAAAGAATATAATGTTCGGGTTGCTTCAAGGTATTTCAAAGGTCCTGAGCTTCTTGTCGATTTACAAGATTATGACTATTCTTTGGACTTGTGGAGTCTCGGTTGTATGTTTGCTGGAATGATATTTCGTAAGGAGCCATTCTTCTATGGACATGATAACTACGATCAGCTAGTGAAAATAGCAAAGGTACTTGGAACTGATGAATTAAATGCTTATCTACACAAGTATCGCATAGAGTTGGATCCACATCTTGGTGCTCTTGTGGGGAGGTAG

Protein Analysis

357

Amino Acids

41.67

Weight (kDa)

9.18

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 121 - 330 1.8e-54 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 123 - 319 1.2e-19 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 257
AccB7I CCANNNNNTGG 1 cut(s) 1052
AccBSI CCGCTC 3 cut(s) 121, 130, 199
AccII CGCG 1 cut(s) 169
AclWI GGATC 2 cut(s) 1037, 1050
AcoI YGGCCR 2 cut(s) 3, 194
AcsI RAATTY 1 cut(s) 23
AcyI GRCGYC 2 cut(s) 258, 569
AfaI GTAC 3 cut(s) 314, 424, 990
AfiI CCNNNNNNNGG 5 cut(s) 100, 273, 307, 342, 1052
AgsI TTSAA 3 cut(s) 587, 828, 838
AhdI GACNNNNNGTC 1 cut(s) 573
AjnI CCWGG 1 cut(s) 219
AjuI GAANNNNNNNTTGG 2 cut(s) 107, 139
AluBI AGCT 4 cut(s) 49, 757, 850, 970
AluI AGCT 4 cut(s) 49, 757, 850, 970
Alw21I GWGCWC 1 cut(s) 1060
Alw26I GTCTC 3 cut(s) 37, 546, 902
AlwI GGATC 2 cut(s) 1037, 1050
AoxI GGCC 7 cut(s) 3, 11, 102, 194, 270, 517, 775
ApeKI GCWGC 1 cut(s) 748
ApoI RAATTY 1 cut(s) 23
AspLEI GCGC 3 cut(s) 171, 226, 260
AspS9I GGNCC 5 cut(s) 12, 271, 518, 775, 842
AsuC2I CCSGG 2 cut(s) 255, 274
AsuHPI GGTGA 4 cut(s) 19, 173, 325, 382
AvaII GGWCC 1 cut(s) 842
BaeI ACNNNNGTAYC 2 cut(s) 1010, 1043
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1042
BanI GGYRCC 1 cut(s) 257
Bbv12I GWGCWC 1 cut(s) 1060
BbvCI CCTCAGC 1 cut(s) 189
BbvI GCAGC 1 cut(s) 760
BccI CCATC 1 cut(s) 801
BciT130I CCWGG 1 cut(s) 221
BciVI GTATCC 1 cut(s) 630
BcnI CCSGG 2 cut(s) 255, 274
BcoDI GTCTC 3 cut(s) 37, 546, 902
BfaI CTAG 1 cut(s) 971
BfoI RGCGCY 1 cut(s) 261
BfuI GTATCC 1 cut(s) 630
BglI GCCNNNNNGGC 2 cut(s) 255, 269
BglII AGATCT 1 cut(s) 231
BisI GCNGC 7 cut(s) 119, 139, 194, 197, 250, 261, 749
BlsI GCNGC 7 cut(s) 120, 140, 195, 198, 251, 262, 750
BmcAI AGTACT 1 cut(s) 314
Bme1390I CCNGG 3 cut(s) 221, 255, 274
Bme18I GGWCC 1 cut(s) 842
BmeRI GACNNNNNGTC 1 cut(s) 573
BmgT120I GGNCC 5 cut(s) 12, 271, 518, 775, 842
BmiI GGNNCC 4 cut(s) 259, 776, 936, 1044
BmrFI CCNGG 3 cut(s) 221, 255, 274
BmrI ACTGGG 1 cut(s) 325
BmsI GCATC 2 cut(s) 150, 715
BmuI ACTGGG 1 cut(s) 325
BoxI GACNNNNGTC 1 cut(s) 161
Bpu10I CCTNAGC 2 cut(s) 189, 846
BpuEI CTTGAG 2 cut(s) 440, 653
BpuMI CCSGG 2 cut(s) 255, 274
Bsa29I ATCGAT 2 cut(s) 242, 738
BsaBI GATNNNNATC 1 cut(s) 1047
BsaHI GRCGYC 2 cut(s) 258, 569
BsaI GGTCTC 1 cut(s) 546
BsaJI CCNNGG 4 cut(s) 219, 253, 267, 306
BsaWI WCCGGW 1 cut(s) 160
BsaXI ACNNNNNCTCC 2 cut(s) 886, 916
Bsc4I CCNNNNNNNGG 5 cut(s) 100, 273, 307, 342, 1052
Bse1I ACTGG 1 cut(s) 320
Bse8I GATNNNNATC 1 cut(s) 1047
BseBI CCWGG 1 cut(s) 221
BseCI ATCGAT 2 cut(s) 242, 738
BseDI CCNNGG 4 cut(s) 219, 253, 267, 306
BseGI GGATG 2 cut(s) 297, 793
BseJI GATNNNNATC 1 cut(s) 1047
BseLI CCNNNNNNNGG 5 cut(s) 100, 273, 307, 342, 1052
BseMII CTCAG 3 cut(s) 203, 789, 837
BseNI ACTGG 1 cut(s) 320
BseRI GAGGAG 3 cut(s) 41, 73, 122
BseX3I CGGCCG 1 cut(s) 194
BseXI GCAGC 1 cut(s) 760
Bsh1236I CGCG 1 cut(s) 169
Bsh1285I CGRYCG 1 cut(s) 197
BshFI GGCC 7 cut(s) 5, 13, 104, 196, 272, 519, 777
BshNI GGYRCC 1 cut(s) 257
BshVI ATCGAT 2 cut(s) 242, 738
BsiEI CGRYCG 1 cut(s) 197
BsiHKAI GWGCWC 1 cut(s) 1060
BsiSI CCGG 4 cut(s) 101, 161, 255, 274
BslFI GGGAC 1 cut(s) 332
BslI CCNNNNNNNGG 5 cut(s) 100, 273, 307, 342, 1052
BsmAI GTCTC 3 cut(s) 37, 546, 902
BsmBI CGTCTC 1 cut(s) 37
BsmFI GGGAC 1 cut(s) 332
BsnI GGCC 7 cut(s) 5, 13, 104, 196, 272, 519, 777
Bso31I GGTCTC 1 cut(s) 546
Bsp1286I GDGCHC 1 cut(s) 1060
Bsp143I GATC 5 cut(s) 231, 735, 739, 964, 1042
BspANI GGCC 7 cut(s) 5, 13, 104, 196, 272, 519, 777
BspCNI CTCAG 3 cut(s) 202, 790, 838
BspDI ATCGAT 2 cut(s) 242, 738
BspFNI CGCG 1 cut(s) 169
BspHI TCATGA 1 cut(s) 742
BspLI GGNNCC 4 cut(s) 259, 776, 936, 1044
BspPI GGATC 2 cut(s) 1037, 1050
BspQI GCTCTTC 1 cut(s) 128
BspT107I GGYRCC 1 cut(s) 257
BspTNI GGTCTC 1 cut(s) 546
BsrBI CCGCTC 3 cut(s) 121, 130, 199
BsrI ACTGG 1 cut(s) 320
BssECI CCNNGG 4 cut(s) 219, 253, 267, 306
BssMI GATC 5 cut(s) 231, 735, 739, 964, 1042
BssNI GRCGYC 2 cut(s) 258, 569
BssT1I CCWWGG 2 cut(s) 267, 306
Bst2UI CCWGG 1 cut(s) 221
Bst4CI ACNGT 4 cut(s) 31, 337, 398, 422
Bst6I CTCTTC 2 cut(s) 102, 128
BstACI GRCGYC 2 cut(s) 258, 569
BstDEI CTNAG 3 cut(s) 189, 798, 846
BstF5I GGATG 2 cut(s) 297, 793
BstFNI CGCG 1 cut(s) 169
BstH2I RGCGCY 1 cut(s) 261
BstHHI GCGC 3 cut(s) 171, 226, 260
BstKTI GATC 5 cut(s) 234, 738, 742, 967, 1045
BstMAI GTCTC 3 cut(s) 37, 546, 902
BstMBI GATC 5 cut(s) 231, 735, 739, 964, 1042
BstMCI CGRYCG 1 cut(s) 197
BstMWI GCNNNNNNNGC 6 cut(s) 127, 152, 205, 255, 269, 754
BstNI CCWGG 1 cut(s) 221
BstPAI GACNNNNGTC 1 cut(s) 161
BstSCI CCNGG 3 cut(s) 219, 253, 272
BstUI CGCG 1 cut(s) 169
BstV1I GCAGC 1 cut(s) 760
BstX2I RGATCY 2 cut(s) 231, 1042
BstYI RGATCY 2 cut(s) 231, 1042
BstZI CGGCCG 1 cut(s) 194
Bsu15I ATCGAT 2 cut(s) 242, 738
BsuI GTATCC 1 cut(s) 630
BsuRI GGCC 7 cut(s) 5, 13, 104, 196, 272, 519, 777
BsuTUI ATCGAT 2 cut(s) 242, 738
BtgZI GCGATG 1 cut(s) 127
BtsCI GGATG 2 cut(s) 297, 793
BtsIMutI CAGTG 2 cut(s) 403, 418
CciI TCATGA 1 cut(s) 742
CciNI GCGGCCGC 1 cut(s) 194
CfoI GCGC 3 cut(s) 171, 226, 260
Cfr13I GGNCC 5 cut(s) 12, 271, 518, 775, 842
ClaI ATCGAT 2 cut(s) 242, 738
CseI GACGC 1 cut(s) 577
Csp6I GTAC 3 cut(s) 313, 423, 989
CviAII CATG 2 cut(s) 743, 953
CviQI GTAC 3 cut(s) 313, 423, 989
DdeI CTNAG 3 cut(s) 189, 798, 846
DinI GGCGCC 1 cut(s) 259
DpnI GATC 5 cut(s) 233, 737, 741, 966, 1044
DpnII GATC 5 cut(s) 231, 735, 739, 964, 1042
DraI TTTAAA 1 cut(s) 610
DriI GACNNNNNGTC 1 cut(s) 573
EaeI YGGCCR 2 cut(s) 3, 194
EagI CGGCCG 1 cut(s) 194
Eam1104I CTCTTC 2 cut(s) 102, 128
Eam1105I GACNNNNNGTC 1 cut(s) 573
EarI CTCTTC 2 cut(s) 102, 128
EciI GGCGGA 2 cut(s) 125, 290
EclXI CGGCCG 1 cut(s) 194
Eco130I CCWWGG 2 cut(s) 267, 306
Eco31I GGTCTC 1 cut(s) 546
Eco32I GATATC 1 cut(s) 544
Eco47I GGWCC 1 cut(s) 842
Eco52I CGGCCG 1 cut(s) 194
EcoO109I RGGNCCY 3 cut(s) 12, 775, 842
EcoRI GAATTC 1 cut(s) 23
EcoRII CCWGG 1 cut(s) 219
EcoRV GATATC 1 cut(s) 544
EcoT14I CCWWGG 2 cut(s) 267, 306
EcoT22I ATGCAT 1 cut(s) 708
EgeI GGCGCC 1 cut(s) 259
EheI GGCGCC 1 cut(s) 259
ErhI CCWWGG 2 cut(s) 267, 306
Esp3I CGTCTC 1 cut(s) 37
FaeI CATG 2 cut(s) 746, 956
FalI AAGNNNNNCTT 2 cut(s) 107, 139
FaqI GGGAC 1 cut(s) 332
FatI CATG 2 cut(s) 742, 952
FauI CCCGC 2 cut(s) 135, 213
Fnu4HI GCNGC 7 cut(s) 119, 139, 194, 197, 250, 261, 749
FokI GGATG 2 cut(s) 284, 780
Fsp4HI GCNGC 7 cut(s) 119, 139, 194, 197, 250, 261, 749
FspBI CTAG 1 cut(s) 971
GlaI GCGC 3 cut(s) 170, 225, 259
GluI GCNGC 7 cut(s) 119, 139, 194, 197, 250, 261, 749
HaeII RGCGCY 1 cut(s) 261
HaeIII GGCC 7 cut(s) 5, 13, 104, 196, 272, 519, 777
HapII CCGG 4 cut(s) 101, 161, 255, 274
HgaI GACGC 1 cut(s) 577
HhaI GCGC 3 cut(s) 171, 226, 260
Hin1I GRCGYC 2 cut(s) 258, 569
Hin1II CATG 2 cut(s) 746, 956
Hin6I GCGC 3 cut(s) 169, 224, 258
HinP1I GCGC 3 cut(s) 169, 224, 258
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HindIII AAGCTT 1 cut(s) 755
HinfI GANTC 5 cut(s) 60, 157, 244, 451, 895
HpaII CCGG 4 cut(s) 101, 161, 255, 274
HphI GGTGA 4 cut(s) 19, 173, 325, 382
Hpy166II GTNNAC 2 cut(s) 292, 418
Hpy188I TCNGA 3 cut(s) 286, 551, 634
Hpy188III TCNNGA 6 cut(s) 57, 448, 710, 743, 797, 845
Hpy8I GTNNAC 2 cut(s) 292, 418
Hpy99I CGWCG 1 cut(s) 154
HpyAV CCTTC 2 cut(s) 84, 370
HpyCH4III ACNGT 4 cut(s) 31, 337, 398, 422
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 3 cut(s) 502, 706, 782
HpyF10VI GCNNNNNNNGC 6 cut(s) 127, 152, 205, 255, 269, 754
HpyF3I CTNAG 3 cut(s) 189, 798, 846
HpySE526I ACGT 1 cut(s) 294
Hsp92I GRCGYC 2 cut(s) 258, 569
Hsp92II CATG 2 cut(s) 746, 956
HspAI GCGC 3 cut(s) 169, 224, 258
KasI GGCGCC 1 cut(s) 257
Kzo9I GATC 5 cut(s) 231, 735, 739, 964, 1042
LguI GCTCTTC 1 cut(s) 128
LmnI GCTCC 3 cut(s) 54, 135, 934
Lsp1109I GCAGC 1 cut(s) 760
LweI GCATC 2 cut(s) 150, 715
MaeI CTAG 1 cut(s) 971
MaeII ACGT 1 cut(s) 294
MaeIII GTNAC 1 cut(s) 163
MalI GATC 5 cut(s) 233, 737, 741, 966, 1044
MbiI CCGCTC 3 cut(s) 121, 130, 199
MboI GATC 5 cut(s) 231, 735, 739, 964, 1042
MboII GAAGA 7 cut(s) 69, 89, 115, 241, 484, 487, 934
MflI RGATCY 2 cut(s) 231, 1042
MhlI GDGCHC 1 cut(s) 1060
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 2 cut(s) 23, 1004
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 258
MlyI GAGTC 2 cut(s) 151, 904
MmeI TCCRAC 3 cut(s) 60, 647, 1020
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 708
MscI TGGCCA 1 cut(s) 5
MseI TTAA 5 cut(s) 465, 480, 492, 609, 1007
MslI CAYNNNNRTG 2 cut(s) 711, 1053
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 193
MspI CCGG 4 cut(s) 101, 161, 255, 274
MspR9I CCNGG 3 cut(s) 221, 255, 274
MvaI CCWGG 1 cut(s) 221
MvnI CGCG 1 cut(s) 169
MwoI GCNNNNNNNGC 6 cut(s) 127, 152, 205, 255, 269, 754
NarI GGCGCC 1 cut(s) 258
NciI CCSGG 2 cut(s) 255, 274
NdeII GATC 5 cut(s) 231, 735, 739, 964, 1042
NlaIII CATG 2 cut(s) 746, 956
NlaIV GGNNCC 4 cut(s) 259, 776, 936, 1044
NmuCI GTSAC 1 cut(s) 163
NotI GCGGCCGC 1 cut(s) 194
NsiI ATGCAT 1 cut(s) 708
PagI TCATGA 1 cut(s) 742
PciSI GCTCTTC 1 cut(s) 128
PfeI GAWTC 3 cut(s) 60, 244, 451
PflMI CCANNNNNTGG 1 cut(s) 1052
PkrI GCNGC 7 cut(s) 120, 140, 195, 198, 251, 262, 750
PleI GAGTC 2 cut(s) 151, 903
PluTI GGCGCC 1 cut(s) 261
PpsI GAGTC 2 cut(s) 151, 903
PpuMI RGGWCCY 1 cut(s) 842
PshAI GACNNNNGTC 1 cut(s) 161
Psp5II RGGWCCY 1 cut(s) 842
Psp6I CCWGG 1 cut(s) 219
PspGI CCWGG 1 cut(s) 219
PspN4I GGNNCC 4 cut(s) 259, 776, 936, 1044
PspPI GGNCC 5 cut(s) 12, 271, 518, 775, 842
PspPPI RGGWCCY 1 cut(s) 842
PsuI RGATCY 2 cut(s) 231, 1042
RsaI GTAC 3 cut(s) 314, 424, 990
RsaNI GTAC 3 cut(s) 313, 423, 989
RseI CAYNNNNRTG 2 cut(s) 711, 1053
SapI GCTCTTC 1 cut(s) 128
SaqAI TTAA 5 cut(s) 465, 480, 492, 609, 1007
SatI GCNGC 7 cut(s) 119, 139, 194, 197, 250, 261, 749
Sau3AI GATC 5 cut(s) 231, 735, 739, 964, 1042
Sau96I GGNCC 5 cut(s) 12, 271, 518, 775, 842
ScaI AGTACT 1 cut(s) 314
SchI GAGTC 2 cut(s) 151, 904
ScrFI CCNGG 3 cut(s) 221, 255, 274
SduI GDGCHC 1 cut(s) 1060
SfaNI GCATC 2 cut(s) 150, 715
SfoI GGCGCC 1 cut(s) 259
SinI GGWCC 1 cut(s) 842
SmiMI CAYNNNNRTG 2 cut(s) 711, 1053
SmlI CTYRAG 2 cut(s) 455, 668
SmoI CTYRAG 2 cut(s) 455, 668
Sse9I AATT 2 cut(s) 23, 1004
SspDI GGCGCC 1 cut(s) 257
SspI AATATT 2 cut(s) 498, 526
SspMI CTAG 1 cut(s) 971
StyD4I CCNGG 3 cut(s) 219, 253, 272
StyI CCWWGG 2 cut(s) 267, 306
TaaI ACNGT 4 cut(s) 31, 337, 398, 422
TaiI ACGT 1 cut(s) 297
TaqI TCGA 5 cut(s) 58, 242, 709, 738, 858
TasI AATT 2 cut(s) 23, 1004
TatI WGTACW 1 cut(s) 312
TauI GCSGC 6 cut(s) 121, 141, 196, 199, 252, 263
TfiI GAWTC 3 cut(s) 60, 244, 451
Tru1I TTAA 5 cut(s) 465, 480, 492, 609, 1007
Tru9I TTAA 5 cut(s) 465, 480, 492, 609, 1007
TscAI CASTG 2 cut(s) 403, 425
TseFI GTSAC 1 cut(s) 163
TseI GCWGC 1 cut(s) 748
Tsp45I GTSAC 1 cut(s) 163
TspDTI ATGAA 2 cut(s) 675, 1017
TspGWI ACGGA 1 cut(s) 440
TspRI CASTG 2 cut(s) 403, 425
Van91I CCANNNNNTGG 1 cut(s) 1052
VpaK11BI GGWCC 1 cut(s) 842
XapI RAATTY 1 cut(s) 23
XcmI CCANNNNNNNNNTGG 1 cut(s) 217
XspI CTAG 1 cut(s) 971
ZrmI AGTACT 1 cut(s) 314
Zsp2I ATGCAT 1 cut(s) 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.