Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0002929

Physical Location & Seq

Genomic Coordinates Forward (+)

30565058 .. 30569489

Gene Structure 4432 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1221700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1146 bp

ATGGAGGGCGGGAGATACGGTGAGGAGCTGGATGTGGCGGTGAGAGTGGTTCACATGGCGTGTGCTCTGTGTCAGAGGCTGCAGGAGGGGTTGGTGTCAGGTGGCAGTGGCCTCGTTAAGTCCAAGGACGATGATTCTCCTGTGACTGTCGCAGATTGGAGTGTGCAAGCAACCGTTAGCTGGATACTGTCTGAGTTCTTTGGGAGTCAAAATGTATCCGTTATTGCTGAAGAAGATGTACAAACGCTCTCTCAGGCTGACTCAGCGGGTTTGCTGGAAGCTGTTGTAAACACTGTTAATGAGTGCTTAGCTGGAGCACCCAAGTATGGTCTTAAAAGTCCACCAAAATCCCTCAACACTGCTCAAGTTCTTGAGGCTATCAGCCGATGCAACTCAGAGGGAGGCCCCAAAGGTAGACATTGGGTACTTGATCCTATTGACGGAACATTAGGGTTTGTGCGTGGGGATCAATATGCTGTAGCTTTAGCATTGATTGAGGATGGGAAGGTTGTTATTGGAGTACTTGGGTGCCCTAATTACCCAATGAAGAAGGAATTGCTCAGTTATCATTATCAGTACCATGAAAACATGTCAAGGTTGTCTCCACCTTCTGACGATATGTGGGAAAGAGGTTGTGTGATGTATGCGAGGAGAGGCAGTGGTGAGGCATGGATGCAGCCACCAATCCGTGGGGATAAGAAGTTTGTGTGGCCGAATTCTGCAAGACTTGTTCGGGTTTCTTCCATCGATGACCCCTCACTGGCCACTAGTTGTGAACCTGTCGAGAAAGCAAATTCAGACCACTCCTTCACAGCAGGACTTGCTCACAGCGTAGGGCTTAGAAATCAACCCCTCCGTGTCTATAGCATGGTGAAATATGCAGCCATAGCTCGAGGAGATGCTGAGCTATTCATGAAGTTTGCAAGGACTGGATACAAGGAGAAGATATGGGATCACGCTGCTGGTGTTGTCATTGTAGAAGAGGCCGGAGGTGTCGTAACTGATGCTGGAGGGCGTCCCCTGGACTTTTCAAAAGGACCTTACTTAGAAGGACTTGACAGGGGCATAGTTGTTTGTTCTGGGGCAACACTGCATGAGAAAATCATTGATGCCGTGTATGCCAGCTGGAACTCTTCTAATTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008252 GO:0008441 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 ko01130 map00920 map01100 map01120 map01130

Pfam Domains

Protein Families

Inositol_P

Protein Analysis

382

Amino Acids

41.2

Weight (kDa)

5.37

Isoelectric Point (pI)

37.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inositol_P	PF00459	45 - 373	1e-44	Inositol monophosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54390
fragaria_vesca	FvH4_3g04430 FvH4_3g04430 FvH4_3g04430 FvH4_3g04430 FvH4_3g04430 FvH4_3g20770 FvH4_3g20770
malus_domestica	MD03G1221700.v1.1 MD05G1323300.v1.1 MD10G1301100.v1.1 MD11G1239100.v1.1
prunus_persica	Prupe.4G039300_v2.0.a1 Prupe.4G187800_v2.0.a1
pyrus_communis	pycom03g17050 pycom05g29760 pycom10g25400 pycom11g21080
rosa_chinensis	RchiOBHm_Chr5g0006821 RchiOBHm_Chr5g0035001
rosa_laevigata	RLG00000031431 RLG00000033591
rosa_multiflora	Rmu_sc0001044.1_g000037
rosa_roxburghii	Rroxscaffold_1G00045390 Rroxscaffold_1G00069230
rosa_rugosa	Rorug04G0424700 Rorug05G0149400 Rorug05G0149500
rosa_samantha	Rh5AG052400 Rh5AG242500 Rh5BG051400 Rh5BG242100 Rh5CG060000 Rh5CG273500 Rh5DG050600 Rh5DG250600
rosa_wichuraiana	Rw5G005220 Rw5G022140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	528
AccB7I	CCANNNNNTGG	1 cut(s)	689
AccI	GTMKAC	1 cut(s)	415
AciI	CCGC	3 cut(s)	9, 38, 266
AclWI	GGATC	3 cut(s)	425, 474, 960
AcoI	YGGCCR	2 cut(s)	710, 762
AcsI	RAATTY	2 cut(s)	715, 793
AcuI	CTGAAG	1 cut(s)	249
AcyI	GRCGYC	1 cut(s)	1015
AfaI	GTAC	4 cut(s)	240, 426, 522, 578
AfiI	CCNNNNNNNGG	5 cut(s)	180, 326, 440, 689, 760
AflIII	ACRYGT	1 cut(s)	588
AgsI	TTSAA	1 cut(s)	1032
AhlI	ACTAGT	1 cut(s)	767
AjnI	CCWGG	1 cut(s)	1020
AluBI	AGCT	8 cut(s)	28, 180, 281, 311, 482, 890, 907, 1125
AluI	AGCT	8 cut(s)	28, 180, 281, 311, 482, 890, 907, 1125
Alw21I	GWGCWC	2 cut(s)	67, 319
Alw26I	GTCTC	1 cut(s)	606
AlwI	GGATC	3 cut(s)	425, 474, 960
AlwNI	CAGNNNCTG	1 cut(s)	79
Ama87I	CYCGRG	1 cut(s)	891
AoxI	GGCC	5 cut(s)	109, 403, 710, 762, 984
ApeKI	GCWGC	4 cut(s)	79, 676, 881, 959
ApoI	RAATTY	2 cut(s)	715, 793
AspS9I	GGNCC	2 cut(s)	404, 1037
AsuHPI	GGTGA	4 cut(s)	32, 52, 674, 883
AvaI	CYCGRG	1 cut(s)	891
AvaII	GGWCC	1 cut(s)	1037
BaeGI	GKGCMC	1 cut(s)	533
BalI	TGGCCA	1 cut(s)	764
BanI	GGYRCC	1 cut(s)	528
BarI	GAAGNNNNNNTAC	2 cut(s)	222, 254
Bbv12I	GWGCWC	2 cut(s)	67, 319
BbvI	GCAGC	4 cut(s)	66, 688, 893, 946
BccI	CCATC	2 cut(s)	494, 752
BceAI	ACGGC	1 cut(s)	1097
BcgI	CGANNNNNNTGC	2 cut(s)	94, 128
BciT130I	CCWGG	1 cut(s)	1022
BciVI	GTATCC	3 cut(s)	177, 226, 926
BcoDI	GTCTC	1 cut(s)	606
BcuI	ACTAGT	1 cut(s)	767
BfaI	CTAG	1 cut(s)	768
BfmI	CTRYAG	3 cut(s)	80, 477, 862
BfuI	GTATCC	3 cut(s)	177, 226, 926
BisI	GCNGC	4 cut(s)	80, 677, 882, 960
BlpI	GCTNAGC	2 cut(s)	307, 903
BlsI	GCNGC	4 cut(s)	81, 678, 883, 961
BmcAI	AGTACT	1 cut(s)	522
Bme1390I	CCNGG	1 cut(s)	1022
Bme18I	GGWCC	1 cut(s)	1037
BmeT110I	CYCGRG	1 cut(s)	891
BmgT120I	GGNCC	2 cut(s)	404, 1037
BmiI	GGNNCC	2 cut(s)	406, 530
BmrFI	CCNGG	1 cut(s)	1022
BmsI	GCATC	5 cut(s)	377, 663, 889, 994, 1099
BpmI	CTGGAG	2 cut(s)	333, 1029
Bpu1102I	GCTNAGC	2 cut(s)	307, 903
BpuEI	CTTGAG	2 cut(s)	348, 392
Bsa29I	ATCGAT	1 cut(s)	747
BsaHI	GRCGYC	1 cut(s)	1015
BsaJI	CCNNGG	3 cut(s)	123, 688, 1020
BsaXI	ACNNNNNCTCC	5 cut(s)	34, 643, 673, 981, 1011
Bsc4I	CCNNNNNNNGG	5 cut(s)	180, 326, 440, 689, 760
Bse1I	ACTGG	2 cut(s)	765, 934
BseBI	CCWGG	1 cut(s)	1022
BseCI	ATCGAT	1 cut(s)	747
BseDI	CCNNGG	3 cut(s)	123, 688, 1020
BseGI	GGATG	3 cut(s)	37, 505, 678
BseLI	CCNNNNNNNGG	5 cut(s)	180, 326, 440, 689, 760
BseMII	CTCAG	6 cut(s)	183, 266, 276, 408, 574, 894
BseNI	ACTGG	2 cut(s)	765, 934
BseRI	GAGGAG	3 cut(s)	38, 664, 909
BseSI	GKGCMC	1 cut(s)	533
BseXI	GCAGC	4 cut(s)	66, 688, 893, 946
BshFI	GGCC	5 cut(s)	111, 405, 712, 764, 986
BshNI	GGYRCC	1 cut(s)	528
BshVI	ATCGAT	1 cut(s)	747
BsiHKAI	GWGCWC	2 cut(s)	67, 319
BsiHKCI	CYCGRG	1 cut(s)	891
BsiSI	CCGG	1 cut(s)	987
BslFI	GGGAC	1 cut(s)	1002
BslI	CCNNNNNNNGG	5 cut(s)	180, 326, 440, 689, 760
BsmAI	GTCTC	1 cut(s)	606
BsmFI	GGGAC	1 cut(s)	1002
BsnI	GGCC	5 cut(s)	111, 405, 712, 764, 986
BsoBI	CYCGRG	1 cut(s)	891
Bsp1286I	GDGCHC	3 cut(s)	67, 319, 533
Bsp1407I	TGTACA	1 cut(s)	238
Bsp143I	GATC	3 cut(s)	430, 466, 952
Bsp1720I	GCTNAGC	2 cut(s)	307, 903
BspACI	CCGC	3 cut(s)	9, 38, 266
BspANI	GGCC	5 cut(s)	111, 405, 712, 764, 986
BspCNI	CTCAG	6 cut(s)	184, 265, 275, 407, 573, 895
BspDI	ATCGAT	1 cut(s)	747
BspHI	TCATGA	1 cut(s)	912
BspLI	GGNNCC	2 cut(s)	406, 530
BspMAI	CTGCAG	1 cut(s)	84
BspPI	GGATC	3 cut(s)	425, 474, 960
BspT107I	GGYRCC	1 cut(s)	528
BsrGI	TGTACA	1 cut(s)	238
BsrI	ACTGG	2 cut(s)	765, 934
BssECI	CCNNGG	3 cut(s)	123, 688, 1020
BssMI	GATC	3 cut(s)	430, 466, 952
BssNI	GRCGYC	1 cut(s)	1015
BssT1I	CCWWGG	1 cut(s)	123
Bst2UI	CCWGG	1 cut(s)	1022
Bst4CI	ACNGT	5 cut(s)	20, 148, 175, 189, 295
Bst6I	CTCTTC	2 cut(s)	975, 1138
BstACI	GRCGYC	1 cut(s)	1015
BstAPI	GCANNNNNTGC	1 cut(s)	821
BstAUI	TGTACA	1 cut(s)	238
BstC8I	GCNNGC	2 cut(s)	168, 1123
BstDEI	CTNAG	9 cut(s)	192, 252, 262, 307, 394, 560, 839, 903, 1045
BstDSI	CCRYGG	1 cut(s)	688
BstF5I	GGATG	3 cut(s)	37, 505, 678
BstKTI	GATC	3 cut(s)	433, 469, 955
BstMAI	GTCTC	1 cut(s)	606
BstMBI	GATC	3 cut(s)	430, 466, 952
BstMWI	GCNNNNNNNGC	4 cut(s)	263, 821, 887, 1118
BstNI	CCWGG	1 cut(s)	1022
BstNSI	RCATGY	1 cut(s)	592
BstSCI	CCNGG	1 cut(s)	1020
BstSFI	CTRYAG	3 cut(s)	80, 477, 862
BstSLI	GKGCMC	1 cut(s)	533
BstV1I	GCAGC	4 cut(s)	66, 688, 893, 946
Bsu15I	ATCGAT	1 cut(s)	747
BsuI	GTATCC	3 cut(s)	177, 226, 926
BsuRI	GGCC	5 cut(s)	111, 405, 712, 764, 986
BsuTUI	ATCGAT	1 cut(s)	747
BtgI	CCRYGG	1 cut(s)	688
BtsCI	GGATG	3 cut(s)	37, 505, 678
BtsI	GCAGTG	4 cut(s)	112, 357, 664, 1088
BtsIMutI	CAGTG	6 cut(s)	112, 291, 357, 664, 758, 1088
Cac8I	GCNNGC	2 cut(s)	168, 1123
CaiI	CAGNNNCTG	1 cut(s)	79
CciI	TCATGA	1 cut(s)	912
Cfr13I	GGNCC	2 cut(s)	404, 1037
ClaI	ATCGAT	1 cut(s)	747
CseI	GACGC	1 cut(s)	1004
Csp6I	GTAC	4 cut(s)	239, 425, 521, 577
CviAII	CATG	7 cut(s)	55, 581, 589, 669, 868, 913, 1094
CviQI	GTAC	4 cut(s)	239, 425, 521, 577
DdeI	CTNAG	9 cut(s)	192, 252, 262, 307, 394, 560, 839, 903, 1045
DpnI	GATC	3 cut(s)	432, 468, 954
DpnII	GATC	3 cut(s)	430, 466, 952
EaeI	YGGCCR	2 cut(s)	710, 762
Eam1104I	CTCTTC	2 cut(s)	975, 1138
EarI	CTCTTC	2 cut(s)	975, 1138
Eco130I	CCWWGG	1 cut(s)	123
Eco47I	GGWCC	1 cut(s)	1037
Eco57I	CTGAAG	1 cut(s)	249
Eco88I	CYCGRG	1 cut(s)	891
EcoO109I	RGGNCCY	2 cut(s)	404, 1037
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	1 cut(s)	1020
EcoT14I	CCWWGG	1 cut(s)	123
ErhI	CCWWGG	1 cut(s)	123
FaeI	CATG	7 cut(s)	58, 584, 592, 672, 871, 916, 1097
FaqI	GGGAC	1 cut(s)	1002
FatI	CATG	7 cut(s)	54, 580, 588, 668, 867, 912, 1093
FauI	CCCGC	2 cut(s)	2, 259
FblI	GTMKAC	1 cut(s)	415
Fnu4HI	GCNGC	4 cut(s)	80, 677, 882, 960
FokI	GGATG	3 cut(s)	44, 512, 685
Fsp4HI	GCNGC	4 cut(s)	80, 677, 882, 960
FspBI	CTAG	1 cut(s)	768
GluI	GCNGC	4 cut(s)	80, 677, 882, 960
GsuI	CTGGAG	2 cut(s)	333, 1029
HaeIII	GGCC	5 cut(s)	111, 405, 712, 764, 986
HapII	CCGG	1 cut(s)	987
HgaI	GACGC	1 cut(s)	1004
Hin1I	GRCGYC	1 cut(s)	1015
Hin1II	CATG	7 cut(s)	58, 584, 592, 672, 871, 916, 1097
HinfI	GANTC	3 cut(s)	134, 205, 260
HpaII	CCGG	1 cut(s)	987
HphI	GGTGA	4 cut(s)	32, 52, 674, 883
Hpy166II	GTNNAC	5 cut(s)	52, 289, 341, 416, 776
Hpy188I	TCNGA	5 cut(s)	75, 193, 397, 613, 799
Hpy188III	TCNNGA	3 cut(s)	371, 784, 913
Hpy8I	GTNNAC	5 cut(s)	52, 289, 341, 416, 776
HpyAV	CCTTC	5 cut(s)	499, 544, 618, 817, 1043
HpyCH4III	ACNGT	5 cut(s)	20, 148, 175, 189, 295
HpyCH4V	TGCA	8 cut(s)	82, 166, 390, 676, 722, 881, 923, 1093
HpyF10VI	GCNNNNNNNGC	4 cut(s)	263, 821, 887, 1118
HpyF3I	CTNAG	9 cut(s)	192, 252, 262, 307, 394, 560, 839, 903, 1045
Hsp92I	GRCGYC	1 cut(s)	1015
Hsp92II	CATG	7 cut(s)	58, 584, 592, 672, 871, 916, 1097
Kzo9I	GATC	3 cut(s)	430, 466, 952
LmnI	GCTCC	2 cut(s)	25, 314
Lsp1109I	GCAGC	4 cut(s)	66, 688, 893, 946
LweI	GCATC	5 cut(s)	377, 663, 889, 994, 1099
MaeI	CTAG	1 cut(s)	768
MaeIII	GTNAC	2 cut(s)	142, 997
MalI	GATC	3 cut(s)	432, 468, 954
MboI	GATC	3 cut(s)	430, 466, 952
MboII	GAAGA	7 cut(s)	242, 245, 559, 732, 955, 992, 1125
MhlI	GDGCHC	3 cut(s)	67, 319, 533
MlsI	TGGCCA	1 cut(s)	764
MluCI	AATT	5 cut(s)	535, 554, 715, 793, 1138
MluNI	TGGCCA	1 cut(s)	764
MlyI	GAGTC	2 cut(s)	214, 254
Mox20I	TGGCCA	1 cut(s)	764
MscI	TGGCCA	1 cut(s)	764
MseI	TTAA	3 cut(s)	117, 297, 333
Msp20I	TGGCCA	1 cut(s)	764
MspA1I	CMGCKG	2 cut(s)	266, 1125
MspI	CCGG	1 cut(s)	987
MspR9I	CCNGG	1 cut(s)	1022
MvaI	CCWGG	1 cut(s)	1022
MwoI	GCNNNNNNNGC	4 cut(s)	263, 821, 887, 1118
NdeII	GATC	3 cut(s)	430, 466, 952
NlaIII	CATG	7 cut(s)	58, 584, 592, 672, 871, 916, 1097
NlaIV	GGNNCC	2 cut(s)	406, 530
NmuCI	GTSAC	1 cut(s)	142
NspI	RCATGY	1 cut(s)	592
PaeR7I	CTCGAG	1 cut(s)	891
PagI	TCATGA	1 cut(s)	912
PciI	ACATGT	1 cut(s)	588
PfeI	GAWTC	1 cut(s)	134
PflMI	CCANNNNNTGG	1 cut(s)	689
PkrI	GCNGC	4 cut(s)	81, 678, 883, 961
PleI	GAGTC	2 cut(s)	213, 254
PpsI	GAGTC	2 cut(s)	213, 254
PpuMI	RGGWCCY	1 cut(s)	1037
PscI	ACATGT	1 cut(s)	588
Psp5II	RGGWCCY	1 cut(s)	1037
Psp6I	CCWGG	1 cut(s)	1020
PspGI	CCWGG	1 cut(s)	1020
PspN4I	GGNNCC	2 cut(s)	406, 530
PspPI	GGNCC	2 cut(s)	404, 1037
PspPPI	RGGWCCY	1 cut(s)	1037
PspXI	VCTCGAGB	1 cut(s)	891
PstI	CTGCAG	1 cut(s)	84
PstNI	CAGNNNCTG	1 cut(s)	79
PvuII	CAGCTG	1 cut(s)	1125
RsaI	GTAC	4 cut(s)	240, 426, 522, 578
RsaNI	GTAC	4 cut(s)	239, 425, 521, 577
SaqAI	TTAA	3 cut(s)	117, 297, 333
SatI	GCNGC	4 cut(s)	80, 677, 882, 960
Sau3AI	GATC	3 cut(s)	430, 466, 952
Sau96I	GGNCC	2 cut(s)	404, 1037
ScaI	AGTACT	1 cut(s)	522
SchI	GAGTC	2 cut(s)	214, 254
ScrFI	CCNGG	1 cut(s)	1022
SduI	GDGCHC	3 cut(s)	67, 319, 533
SfaNI	GCATC	5 cut(s)	377, 663, 889, 994, 1099
SfcI	CTRYAG	3 cut(s)	80, 477, 862
Sfr274I	CTCGAG	1 cut(s)	891
SinI	GGWCC	1 cut(s)	1037
SlaI	CTCGAG	1 cut(s)	891
SmlI	CTYRAG	3 cut(s)	363, 371, 891
SmoI	CTYRAG	3 cut(s)	363, 371, 891
SpeI	ACTAGT	1 cut(s)	767
Sse9I	AATT	5 cut(s)	535, 554, 715, 793, 1138
SsiI	CCGC	3 cut(s)	9, 38, 266
SspMI	CTAG	1 cut(s)	768
StyD4I	CCNGG	1 cut(s)	1020
StyI	CCWWGG	1 cut(s)	123
TaaI	ACNGT	5 cut(s)	20, 148, 175, 189, 295
TaqI	TCGA	3 cut(s)	747, 783, 892
TasI	AATT	5 cut(s)	535, 554, 715, 793, 1138
TatI	WGTACW	2 cut(s)	238, 520
TfiI	GAWTC	1 cut(s)	134
Tru1I	TTAA	3 cut(s)	117, 297, 333
Tru9I	TTAA	3 cut(s)	117, 297, 333
TscAI	CASTG	6 cut(s)	112, 298, 364, 664, 765, 1095
TseFI	GTSAC	1 cut(s)	142
TseI	GCWGC	4 cut(s)	79, 676, 881, 959
Tsp45I	GTSAC	1 cut(s)	142
TspDTI	ATGAA	4 cut(s)	560, 597, 901, 929
TspGWI	ACGGA	4 cut(s)	208, 456, 677, 845
TspRI	CASTG	6 cut(s)	112, 298, 364, 664, 765, 1095
Van91I	CCANNNNNTGG	1 cut(s)	689
VpaK11BI	GGWCC	1 cut(s)	1037
XapI	RAATTY	2 cut(s)	715, 793
XceI	RCATGY	1 cut(s)	592
XhoI	CTCGAG	1 cut(s)	891
XmiI	GTMKAC	1 cut(s)	415
XspI	CTAG	1 cut(s)	768
ZrmI	AGTACT	1 cut(s)	522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.