pycom11g21080

PAP-specific phosphatase HAL2-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
24171058 .. 24174101
3044 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g21080.1

Sequence Viewer

Length: 1146 bp
ATGGAGGGCGAGAAATACGGGGAGGAGCTGGATGTGGCGGTGAGAGTGGTTCACATGGCGTGTGCTCTGTGTCAGAGGCTGCAGGAGGGTTTGGTGTCAGGTGGCAGTAGCCTCGTTAAGTCCAAGGACGATGATTCTCCTGTGACTGTCGCAGATTGGAGTGTGCAAGCAACCATTAGCTGGATGCTGTCTGAATTCTTTGGAAGTCAGAATGTATCCATTATTGCTGAAGAAGATGTACAAACTCTCTCTCAGGCTGACTCAGCAGGTTTGCTGGAAGCTGTTGTGAACACTGTTAATGAATGCTTAGCTGGAGCCCCCAAGTATGGTCTTAAAAGTCCACCAAAATCCCTCAACACCTCTCAAGTTCTTGAGGCTATCAGCCGATGCAACTCAGCGGGAGGCCCCAAAGGAAAACATTGGGTACTTGATCCTGTTGACGGAACACTAGGGTTTGTGCGTGGTGATCAATACGCTGTAGCTTTAGCATTGATTGAGGATGGAAAAGTTGTTATTGGAGTACTTGGGTGCCCTAATTACCCAATGAATAAAGAATTGCTCAGTTATCATTATCAGTACCATGAAGTCATGTCAAAGTTGTCTCCCCCTTCTGAGGATATGTGGGAAAGAGGTTGTGTGATGTATGCAAGGAGAGGCAGTGGTAATGCATGGATGCAGCCACCAATCCGTGGGGATAAGAAGTTTGTGTGGCCAAATTCTGCAAGACTTATTCGGGTTTCTTCCATCGATGACCCCGCGCTGGCTACTTGTTGTGAACCTGTCGAGAGAGCAAATTCAGACCACTCCTTCACAGCAGGACTTGCTCACAGCGTAGGGCTTAGAAATCAGCCCCTGCGTGTCTATAGCATGGTGAAATATGCAGCCATAGCTCGAGGAGATGCCGAGCTATTCATGAAGTTTGCAAGGACTGGATACAAGGAGAAGATATGGGATCACGCTGCTGGTCTTGTCATTGTAGAAGAGGCCGGAGGTGTCATAACTGATGCTGGAGGGCGTCCCCTGGACTTCTCAAAGGGACCGTACTTAGAAGGACTTGACAGGGGCATAGTTGTTTGTTCTGGGGCCACACTACATGAGAAAATCATTGATGCCGTGTATGCCAGCTGGGACTCTTCTAATTTATGA

Protein Analysis

382

Amino Acids

41.25

Weight (kDa)

5.28

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inositol_P PF00459 44 - 373 1.7e-41 Inositol monophosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 257
AccB1I GGYRCC 1 cut(s) 528
AccB7I CCANNNNNTGG 2 cut(s) 180, 689
AccII CGCG 1 cut(s) 758
AciI CCGC 3 cut(s) 38, 398, 756
AclWI GGATC 2 cut(s) 425, 960
AcoI YGGCCR 1 cut(s) 710
AcsI RAATTY 3 cut(s) 194, 715, 793
AcuI CTGAAG 1 cut(s) 249
AcyI GRCGYC 1 cut(s) 1015
AfaI GTAC 5 cut(s) 240, 426, 522, 578, 1043
AfiI CCNNNNNNNGG 6 cut(s) 180, 326, 440, 613, 689, 760
AjnI CCWGG 1 cut(s) 1020
AluBI AGCT 8 cut(s) 28, 180, 281, 311, 482, 890, 907, 1125
AluI AGCT 8 cut(s) 28, 180, 281, 311, 482, 890, 907, 1125
Alw21I GWGCWC 1 cut(s) 67
Alw26I GTCTC 1 cut(s) 606
AlwI GGATC 2 cut(s) 425, 960
AlwNI CAGNNNCTG 2 cut(s) 79, 853
Ama87I CYCGRG 1 cut(s) 891
AoxI GGCC 4 cut(s) 403, 710, 984, 1083
ApeKI GCWGC 4 cut(s) 79, 676, 881, 959
ApoI RAATTY 3 cut(s) 194, 715, 793
AspLEI GCGC 1 cut(s) 760
AspS9I GGNCC 3 cut(s) 404, 1037, 1083
AsuHPI GGTGA 3 cut(s) 52, 476, 883
AvaI CYCGRG 1 cut(s) 891
AvaII GGWCC 1 cut(s) 1037
BaeGI GKGCMC 1 cut(s) 533
BalI TGGCCA 1 cut(s) 712
BanI GGYRCC 1 cut(s) 528
BanII GRGCYC 1 cut(s) 319
BarI GAAGNNNNNNTAC 2 cut(s) 222, 254
Bbv12I GWGCWC 1 cut(s) 67
BbvI GCAGC 4 cut(s) 66, 688, 893, 946
BccI CCATC 2 cut(s) 494, 752
BceAI ACGGC 1 cut(s) 1097
BcgI CGANNNNNNTGC 2 cut(s) 94, 128
BciT130I CCWGG 1 cut(s) 1022
BciVI GTATCC 2 cut(s) 226, 926
BclI TGATCA 1 cut(s) 466
BcoDI GTCTC 1 cut(s) 606
BfaI CTAG 1 cut(s) 449
BfmI CTRYAG 3 cut(s) 80, 477, 862
BfuAI ACCTGC 1 cut(s) 257
BfuI GTATCC 2 cut(s) 226, 926
BisI GCNGC 4 cut(s) 80, 677, 882, 960
BlpI GCTNAGC 1 cut(s) 307
BlsI GCNGC 4 cut(s) 81, 678, 883, 961
BmcAI AGTACT 1 cut(s) 522
Bme1390I CCNGG 1 cut(s) 1022
Bme18I GGWCC 1 cut(s) 1037
BmeT110I CYCGRG 1 cut(s) 891
BmgT120I GGNCC 3 cut(s) 404, 1037, 1083
BmiI GGNNCC 5 cut(s) 316, 406, 530, 1038, 1084
BmrFI CCNGG 1 cut(s) 1022
BmsI GCATC 6 cut(s) 174, 377, 663, 889, 994, 1099
BpmI CTGGAG 2 cut(s) 333, 1029
Bpu1102I GCTNAGC 1 cut(s) 307
BpuEI CTTGAG 2 cut(s) 348, 392
Bsa29I ATCGAT 1 cut(s) 747
BsaHI GRCGYC 1 cut(s) 1015
BsaJI CCNNGG 3 cut(s) 123, 688, 1020
BsaXI ACNNNNNCTCC 2 cut(s) 643, 673
Bsc4I CCNNNNNNNGG 6 cut(s) 180, 326, 440, 613, 689, 760
Bse1I ACTGG 1 cut(s) 934
BseBI CCWGG 1 cut(s) 1022
BseCI ATCGAT 1 cut(s) 747
BseDI CCNNGG 3 cut(s) 123, 688, 1020
BseGI GGATG 4 cut(s) 37, 189, 505, 678
BseLI CCNNNNNNNGG 6 cut(s) 180, 326, 440, 613, 689, 760
BseMII CTCAG 5 cut(s) 266, 276, 408, 574, 603
BseNI ACTGG 1 cut(s) 934
BseRI GAGGAG 2 cut(s) 38, 909
BseSI GKGCMC 1 cut(s) 533
BseXI GCAGC 4 cut(s) 66, 688, 893, 946
BseYI CCCAGC 1 cut(s) 1125
Bsh1236I CGCG 1 cut(s) 758
BshFI GGCC 4 cut(s) 405, 712, 986, 1085
BshNI GGYRCC 1 cut(s) 528
BshVI ATCGAT 1 cut(s) 747
BsiHKAI GWGCWC 1 cut(s) 67
BsiHKCI CYCGRG 1 cut(s) 891
BsiSI CCGG 1 cut(s) 987
BslFI GGGAC 3 cut(s) 1002, 1050, 1142
BslI CCNNNNNNNGG 6 cut(s) 180, 326, 440, 613, 689, 760
BsmAI GTCTC 1 cut(s) 606
BsmFI GGGAC 3 cut(s) 1002, 1050, 1142
BsmI GAATGC 1 cut(s) 308
BsnI GGCC 4 cut(s) 405, 712, 986, 1085
BsoBI CYCGRG 1 cut(s) 891
Bsp1286I GDGCHC 3 cut(s) 67, 319, 533
Bsp1407I TGTACA 1 cut(s) 238
Bsp143I GATC 3 cut(s) 430, 466, 952
Bsp1720I GCTNAGC 1 cut(s) 307
BspACI CCGC 3 cut(s) 38, 398, 756
BspANI GGCC 4 cut(s) 405, 712, 986, 1085
BspCNI CTCAG 5 cut(s) 265, 275, 407, 573, 604
BspDI ATCGAT 1 cut(s) 747
BspFNI CGCG 1 cut(s) 758
BspHI TCATGA 1 cut(s) 912
BspLI GGNNCC 5 cut(s) 316, 406, 530, 1038, 1084
BspMAI CTGCAG 1 cut(s) 84
BspMI ACCTGC 1 cut(s) 257
BspPI GGATC 2 cut(s) 425, 960
BspT107I GGYRCC 1 cut(s) 528
BsrGI TGTACA 1 cut(s) 238
BsrI ACTGG 1 cut(s) 934
BssECI CCNNGG 3 cut(s) 123, 688, 1020
BssMI GATC 3 cut(s) 430, 466, 952
BssNI GRCGYC 1 cut(s) 1015
BssT1I CCWWGG 1 cut(s) 123
Bst2UI CCWGG 1 cut(s) 1022
Bst4CI ACNGT 3 cut(s) 148, 295, 1041
Bst6I CTCTTC 2 cut(s) 975, 1138
BstACI GRCGYC 1 cut(s) 1015
BstAPI GCANNNNNTGC 1 cut(s) 821
BstAUI TGTACA 1 cut(s) 238
BstC8I GCNNGC 3 cut(s) 168, 762, 1123
BstDEI CTNAG 8 cut(s) 252, 262, 307, 394, 560, 612, 839, 1045
BstDSI CCRYGG 1 cut(s) 688
BstF5I GGATG 4 cut(s) 37, 189, 505, 678
BstFNI CGCG 1 cut(s) 758
BstHHI GCGC 1 cut(s) 760
BstKTI GATC 3 cut(s) 433, 469, 955
BstMAI GTCTC 1 cut(s) 606
BstMBI GATC 3 cut(s) 430, 466, 952
BstMWI GCNNNNNNNGC 4 cut(s) 263, 821, 887, 1118
BstNI CCWGG 1 cut(s) 1022
BstSCI CCNGG 1 cut(s) 1020
BstSFI CTRYAG 3 cut(s) 80, 477, 862
BstSLI GKGCMC 1 cut(s) 533
BstUI CGCG 1 cut(s) 758
BstV1I GCAGC 4 cut(s) 66, 688, 893, 946
Bsu15I ATCGAT 1 cut(s) 747
BsuI GTATCC 2 cut(s) 226, 926
BsuRI GGCC 4 cut(s) 405, 712, 986, 1085
BsuTUI ATCGAT 1 cut(s) 747
BtgI CCRYGG 1 cut(s) 688
BtsCI GGATG 4 cut(s) 37, 189, 505, 678
BtsI GCAGTG 1 cut(s) 664
BtsIMutI CAGTG 2 cut(s) 291, 664
BveI ACCTGC 1 cut(s) 257
Cac8I GCNNGC 3 cut(s) 168, 762, 1123
CaiI CAGNNNCTG 2 cut(s) 79, 853
CciI TCATGA 1 cut(s) 912
CfoI GCGC 1 cut(s) 760
Cfr13I GGNCC 3 cut(s) 404, 1037, 1083
ClaI ATCGAT 1 cut(s) 747
CseI GACGC 1 cut(s) 1004
Csp6I GTAC 5 cut(s) 239, 425, 521, 577, 1042
CviAII CATG 7 cut(s) 55, 581, 589, 669, 868, 913, 1094
CviQI GTAC 5 cut(s) 239, 425, 521, 577, 1042
DdeI CTNAG 8 cut(s) 252, 262, 307, 394, 560, 612, 839, 1045
DpnI GATC 3 cut(s) 432, 468, 954
DpnII GATC 3 cut(s) 430, 466, 952
EaeI YGGCCR 1 cut(s) 710
Eam1104I CTCTTC 2 cut(s) 975, 1138
EarI CTCTTC 2 cut(s) 975, 1138
Eco130I CCWWGG 1 cut(s) 123
Eco24I GRGCYC 1 cut(s) 319
Eco47I GGWCC 1 cut(s) 1037
Eco57I CTGAAG 1 cut(s) 249
Eco88I CYCGRG 1 cut(s) 891
EcoO109I RGGNCCY 1 cut(s) 404
EcoRI GAATTC 1 cut(s) 194
EcoRII CCWGG 1 cut(s) 1020
EcoT14I CCWWGG 1 cut(s) 123
EcoT22I ATGCAT 1 cut(s) 670
EcoT38I GRGCYC 1 cut(s) 319
ErhI CCWWGG 1 cut(s) 123
FaeI CATG 7 cut(s) 58, 584, 592, 672, 871, 916, 1097
FaqI GGGAC 3 cut(s) 1002, 1050, 1142
FatI CATG 7 cut(s) 54, 580, 588, 668, 867, 912, 1093
FauI CCCGC 2 cut(s) 391, 763
FbaI TGATCA 1 cut(s) 466
Fnu4HI GCNGC 4 cut(s) 80, 677, 882, 960
FokI GGATG 4 cut(s) 44, 196, 512, 685
FriOI GRGCYC 1 cut(s) 319
Fsp4HI GCNGC 4 cut(s) 80, 677, 882, 960
FspBI CTAG 1 cut(s) 449
GlaI GCGC 1 cut(s) 759
GluI GCNGC 4 cut(s) 80, 677, 882, 960
GsaI CCCAGC 1 cut(s) 1129
GsuI CTGGAG 2 cut(s) 333, 1029
HaeIII GGCC 4 cut(s) 405, 712, 986, 1085
HapII CCGG 1 cut(s) 987
HgaI GACGC 1 cut(s) 1004
HhaI GCGC 1 cut(s) 760
Hin1I GRCGYC 1 cut(s) 1015
Hin1II CATG 7 cut(s) 58, 584, 592, 672, 871, 916, 1097
Hin6I GCGC 1 cut(s) 758
HinP1I GCGC 1 cut(s) 758
HincII GTYRAC 1 cut(s) 439
HindII GTYRAC 1 cut(s) 439
HinfI GANTC 3 cut(s) 134, 260, 1130
HpaII CCGG 1 cut(s) 987
HphI GGTGA 3 cut(s) 52, 476, 883
Hpy166II GTNNAC 5 cut(s) 52, 289, 341, 439, 776
Hpy188I TCNGA 5 cut(s) 75, 193, 210, 613, 799
Hpy188III TCNNGA 3 cut(s) 371, 784, 913
Hpy8I GTNNAC 5 cut(s) 52, 289, 341, 439, 776
HpyAV CCTTC 3 cut(s) 618, 817, 1043
HpyCH4III ACNGT 3 cut(s) 148, 295, 1041
HpyCH4V TGCA 9 cut(s) 82, 166, 390, 647, 668, 676, 722, 881, 923
HpyF10VI GCNNNNNNNGC 4 cut(s) 263, 821, 887, 1118
HpyF3I CTNAG 8 cut(s) 252, 262, 307, 394, 560, 612, 839, 1045
Hsp92I GRCGYC 1 cut(s) 1015
Hsp92II CATG 7 cut(s) 58, 584, 592, 672, 871, 916, 1097
HspAI GCGC 1 cut(s) 758
Ksp22I TGATCA 1 cut(s) 466
Kzo9I GATC 3 cut(s) 430, 466, 952
LmnI GCTCC 2 cut(s) 25, 314
Lsp1109I GCAGC 4 cut(s) 66, 688, 893, 946
LweI GCATC 6 cut(s) 174, 377, 663, 889, 994, 1099
MaeI CTAG 1 cut(s) 449
MaeIII GTNAC 1 cut(s) 142
MalI GATC 3 cut(s) 432, 468, 954
MboI GATC 3 cut(s) 430, 466, 952
MboII GAAGA 6 cut(s) 242, 245, 732, 955, 992, 1125
MhlI GDGCHC 3 cut(s) 67, 319, 533
MlsI TGGCCA 1 cut(s) 712
MluCI AATT 6 cut(s) 194, 535, 554, 715, 793, 1138
MluNI TGGCCA 1 cut(s) 712
MlyI GAGTC 2 cut(s) 254, 1124
Mox20I TGGCCA 1 cut(s) 712
Mph1103I ATGCAT 1 cut(s) 670
MscI TGGCCA 1 cut(s) 712
MseI TTAA 3 cut(s) 117, 297, 333
Msp20I TGGCCA 1 cut(s) 712
MspA1I CMGCKG 2 cut(s) 398, 1125
MspI CCGG 1 cut(s) 987
MspR9I CCNGG 1 cut(s) 1022
Mva1269I GAATGC 1 cut(s) 308
MvaI CCWGG 1 cut(s) 1022
MvnI CGCG 1 cut(s) 758
MwoI GCNNNNNNNGC 4 cut(s) 263, 821, 887, 1118
NdeII GATC 3 cut(s) 430, 466, 952
NlaIII CATG 7 cut(s) 58, 584, 592, 672, 871, 916, 1097
NlaIV GGNNCC 5 cut(s) 316, 406, 530, 1038, 1084
NmeAIII GCCGAG 1 cut(s) 928
NmuCI GTSAC 1 cut(s) 142
NsiI ATGCAT 1 cut(s) 670
PaeR7I CTCGAG 1 cut(s) 891
PagI TCATGA 1 cut(s) 912
PctI GAATGC 1 cut(s) 308
PfeI GAWTC 1 cut(s) 134
PflMI CCANNNNNTGG 2 cut(s) 180, 689
PkrI GCNGC 4 cut(s) 81, 678, 883, 961
PleI GAGTC 2 cut(s) 254, 1124
PpsI GAGTC 2 cut(s) 254, 1124
Psp6I CCWGG 1 cut(s) 1020
PspFI CCCAGC 1 cut(s) 1125
PspGI CCWGG 1 cut(s) 1020
PspN4I GGNNCC 5 cut(s) 316, 406, 530, 1038, 1084
PspPI GGNCC 3 cut(s) 404, 1037, 1083
PspXI VCTCGAGB 1 cut(s) 891
PstI CTGCAG 1 cut(s) 84
PstNI CAGNNNCTG 2 cut(s) 79, 853
PvuII CAGCTG 1 cut(s) 1125
RsaI GTAC 5 cut(s) 240, 426, 522, 578, 1043
RsaNI GTAC 5 cut(s) 239, 425, 521, 577, 1042
SaqAI TTAA 3 cut(s) 117, 297, 333
SatI GCNGC 4 cut(s) 80, 677, 882, 960
Sau3AI GATC 3 cut(s) 430, 466, 952
Sau96I GGNCC 3 cut(s) 404, 1037, 1083
ScaI AGTACT 1 cut(s) 522
SchI GAGTC 2 cut(s) 254, 1124
ScrFI CCNGG 1 cut(s) 1022
SduI GDGCHC 3 cut(s) 67, 319, 533
SfaNI GCATC 6 cut(s) 174, 377, 663, 889, 994, 1099
SfcI CTRYAG 3 cut(s) 80, 477, 862
Sfr274I CTCGAG 1 cut(s) 891
SinI GGWCC 1 cut(s) 1037
SlaI CTCGAG 1 cut(s) 891
SmlI CTYRAG 3 cut(s) 363, 371, 891
SmoI CTYRAG 3 cut(s) 363, 371, 891
Sse9I AATT 6 cut(s) 194, 535, 554, 715, 793, 1138
SsiI CCGC 3 cut(s) 38, 398, 756
SspMI CTAG 1 cut(s) 449
StyD4I CCNGG 1 cut(s) 1020
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 3 cut(s) 148, 295, 1041
TaqI TCGA 3 cut(s) 747, 783, 892
TasI AATT 6 cut(s) 194, 535, 554, 715, 793, 1138
TatI WGTACW 2 cut(s) 238, 520
TfiI GAWTC 1 cut(s) 134
Tru1I TTAA 3 cut(s) 117, 297, 333
Tru9I TTAA 3 cut(s) 117, 297, 333
TscAI CASTG 2 cut(s) 298, 664
TseFI GTSAC 1 cut(s) 142
TseI GCWGC 4 cut(s) 79, 676, 881, 959
Tsp45I GTSAC 1 cut(s) 142
TspDTI ATGAA 5 cut(s) 315, 560, 597, 901, 929
TspGWI ACGGA 2 cut(s) 456, 677
TspRI CASTG 2 cut(s) 298, 664
Van91I CCANNNNNTGG 2 cut(s) 180, 689
VpaK11BI GGWCC 1 cut(s) 1037
XapI RAATTY 3 cut(s) 194, 715, 793
XhoI CTCGAG 1 cut(s) 891
XspI CTAG 1 cut(s) 449
ZrmI AGTACT 1 cut(s) 522
Zsp2I ATGCAT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.