Prupe.4G039300_v2.0.a1

PAP-specific phosphatase HAL2-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
1838761 .. 1842691
3931 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G039300.1

Sequence Viewer

Length: 1389 bp
ATGCCTTTACATTCTTCGAGTATGGCTATAAAAGTCTCGCATAATTTGGGACTTGGAAAATGGAATGACAAGCACAACAACTTCATACCCAACCACGTAGGAAGCTTCTTTATCTTCTTACGCGGCAACAAAACCCACCACAACGCCATGTCAAGAGGCCACATTGGCTGCTGCCTATCCAGCTTCAACCAAACCCAGTCCTTCCCTGTCATGGAAGACCAGAAAAAACTCAGCTTTTCATCCCCAGAACCTGTGAACTACTCTCAAGAATTGGATGTGGCTGTCAGAACCGTGCAATTGGCATGCTCTCTCTGCCAGAGAGTTCAAAACAGTTTGATTTCTAAGACCAGCGATGGGGTTCAATCCAAAGATGACAATTCCCCTGTCACTGTTGCAGATTGGAGTGTCCAAGCAACTGTGAGCTGCATCCTGTCAGAGTCTTTTGGGAGCAGTAATGTGTCCATTGTTGCTGAAGAAGATATTCAAAATCTTTCCAAGGCTAAGGCAGGTGGAGTATTAGAAACTGTGGTGAAAACAGTAAATGAATGCCTAGCTGAAGCGCCTCGCTATGGACTTAAAGGTCCGAAAATGGCTCTTGGGACAACAGAGGTTCTTGAAGCCATCAATCGATGCAACTCCATTGGAGGGCCTGCTGGGAGATTTTGGGCACTCGACCCTGTTGATGGCACATTGGGTTTTGTGCGAGGTGATCAATATGCTATAGCTCTGGCATTAATAGAGGATGGAGAAGTAGTGCTTGGAGTTCTTGGCTGTCCTAATTACCCAATGAGGAAGGAATGGCTCAACTATCATCACCGGTATCATAGAATTATATCTAAGTTGACCCCATCAACATCAGAATCATGGGACAAGGGTTGTGTGATTTATGCTAGAAGAGGTAGTGGGGAGGCTTGGATGCAACCACTGCTCCATGTAAATAAGAACTTAGTGTGGCCAAACTCTGCAAGACCTGTCCGAGTGTCCTCCATTGATAATCCATCATTGGCAACCTTCTGTGAACCGGTTGAGAAGGCAAATTCAAGTCATTCCTTCACAGCAGGGCTAGCTCACAGTGTCGGGCTCAGGAAGCAGCCATTGCGAGTATACAGCATGGTGAAGTACGCGGCTATAGCTCGTGGGGATGCCGAGATTTTTATGAAGTTTGCAAGGGCTGGCTACAAGGAGAAGATTTGGGATCATGCAGCTGGTGTAGTTATCATACAAGAGGCTGGTGGTGTAGTTACAGATGCTGGAGGGTGTCCACTGGACTTTTCAAAGGGCATATACTTAGAAGGTCTTGATCGAGGTGTAATTGCTAGCGCTGGAGCCAACCTACATGACAAGATCATCAGGGCTGTTGATGCTAGCTGGGACTCATCTGCTCTGTAA

Protein Analysis

463

Amino Acids

50.17

Weight (kDa)

7.97

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 497
AasI GACNNNNNNGTC 1 cut(s) 579
Acc36I ACCTGC 1 cut(s) 497
AccI GTMKAC 1 cut(s) 1104
AccII CGCG 2 cut(s) 123, 1124
AciI CCGC 2 cut(s) 123, 1124
AclWI GGATC 1 cut(s) 1203
AcoI YGGCCR 1 cut(s) 953
AcsI RAATTY 1 cut(s) 1036
AcuI CTGAAG 2 cut(s) 492, 576
AfaI GTAC 1 cut(s) 1121
AfeI AGCGCT 1 cut(s) 1321
AfiI CCNNNNNNNGG 5 cut(s) 211, 354, 569, 645, 683
AgeI ACCGGT 2 cut(s) 816, 1021
AgsI TTSAA 7 cut(s) 187, 326, 362, 485, 617, 1041, 1275
AjuI GAANNNNNNNTTGG 2 cut(s) 741, 773
Alw26I GTCTC 1 cut(s) 40
AlwI GGATC 1 cut(s) 1203
AlwNI CAGNNNCTG 2 cut(s) 251, 1250
Aor51HI AGCGCT 1 cut(s) 1321
AoxI GGCC 3 cut(s) 157, 647, 953
ApeKI GCWGC 5 cut(s) 168, 171, 423, 1090, 1202
ApoI RAATTY 1 cut(s) 1036
AseI ATTAAT 1 cut(s) 734
AsiGI ACCGGT 2 cut(s) 816, 1021
Asp700I GAANNNNTTC 1 cut(s) 480
AspLEI GCGC 2 cut(s) 562, 1322
AspS9I GGNCC 2 cut(s) 581, 647
AsuHPI GGTGA 4 cut(s) 541, 719, 806, 1126
AsuNHI GCTAGC 3 cut(s) 1063, 1316, 1364
AvaII GGWCC 1 cut(s) 581
BaeGI GKGCMC 1 cut(s) 670
BalI TGGCCA 1 cut(s) 955
BanII GRGCYC 1 cut(s) 1083
BauI CACGAG 1 cut(s) 1134
BbsI GAAGAC 1 cut(s) 222
BbvI GCAGC 5 cut(s) 155, 158, 410, 1102, 1214
BccI CCATC 6 cut(s) 347, 629, 677, 737, 856, 1006
BclI TGATCA 1 cut(s) 709
BcoDI GTCTC 1 cut(s) 40
BfaI CTAG 5 cut(s) 551, 891, 1064, 1317, 1365
BfmI CTRYAG 2 cut(s) 720, 1128
BfoI RGCGCY 2 cut(s) 563, 1323
BfuAI ACCTGC 1 cut(s) 497
BglI GCCNNNNNGGC 1 cut(s) 165
BisI GCNGC 7 cut(s) 124, 169, 172, 424, 1091, 1125, 1203
BlsI GCNGC 7 cut(s) 125, 170, 173, 425, 1092, 1126, 1204
Bme18I GGWCC 1 cut(s) 581
BmgT120I GGNCC 2 cut(s) 581, 647
BmiI GGNNCC 1 cut(s) 1327
BmrI ACTGGG 1 cut(s) 190
BmsI GCATC 6 cut(s) 435, 620, 906, 1132, 1237, 1351
BmtI GCTAGC 3 cut(s) 1067, 1320, 1368
BmuI ACTGGG 1 cut(s) 190
BpiI GAAGAC 1 cut(s) 222
BpmI CTGGAG 2 cut(s) 1272, 1344
Bpu10I CCTNAGC 2 cut(s) 501, 1082
BpuEI CTTGAG 1 cut(s) 249
Bsa29I ATCGAT 1 cut(s) 628
BsaAI YACGTR 1 cut(s) 97
BsaJI CCNNGG 1 cut(s) 495
BsaWI WCCGGW 2 cut(s) 816, 1021
BsaXI ACNNNNNCTCC 4 cut(s) 738, 768, 912, 942
Bsc4I CCNNNNNNNGG 5 cut(s) 211, 354, 569, 645, 683
Bse118I RCCGGY 2 cut(s) 816, 1021
Bse1I ACTGG 2 cut(s) 196, 1269
Bse3DI GCAATG 1 cut(s) 1094
BseCI ATCGAT 1 cut(s) 628
BseDI CCNNGG 1 cut(s) 495
BseGI GGATG 6 cut(s) 239, 280, 426, 748, 921, 1147
BseLI CCNNNNNNNGG 5 cut(s) 211, 354, 569, 645, 683
BseMI GCAATG 1 cut(s) 1094
BseMII CTCAG 2 cut(s) 244, 1096
BseNI ACTGG 2 cut(s) 196, 1269
BseSI GKGCMC 1 cut(s) 670
BseXI GCAGC 5 cut(s) 155, 158, 410, 1102, 1214
BseYI CCCAGC 2 cut(s) 653, 1368
Bsh1236I CGCG 2 cut(s) 123, 1124
BshFI GGCC 3 cut(s) 159, 649, 955
BshTI ACCGGT 2 cut(s) 816, 1021
BshVI ATCGAT 1 cut(s) 628
BsiSI CCGG 2 cut(s) 817, 1022
BslFI GGGAC 4 cut(s) 63, 613, 881, 1385
BslI CCNNNNNNNGG 5 cut(s) 211, 354, 569, 645, 683
BsmAI GTCTC 1 cut(s) 40
BsmFI GGGAC 4 cut(s) 63, 613, 881, 1385
BsmI GAATGC 1 cut(s) 551
BsnI GGCC 3 cut(s) 159, 649, 955
Bsp1286I GDGCHC 2 cut(s) 670, 1083
Bsp143I GATC 4 cut(s) 709, 1195, 1300, 1344
BspACI CCGC 2 cut(s) 123, 1124
BspANI GGCC 3 cut(s) 159, 649, 955
BspCNI CTCAG 2 cut(s) 243, 1095
BspDI ATCGAT 1 cut(s) 628
BspFNI CGCG 2 cut(s) 123, 1124
BspLI GGNNCC 1 cut(s) 1327
BspMI ACCTGC 1 cut(s) 497
BspOI GCTAGC 3 cut(s) 1067, 1320, 1368
BspPI GGATC 1 cut(s) 1203
BsrDI GCAATG 1 cut(s) 1094
BsrFI RCCGGY 2 cut(s) 816, 1021
BsrI ACTGG 2 cut(s) 196, 1269
BssAI RCCGGY 2 cut(s) 816, 1021
BssECI CCNNGG 1 cut(s) 495
BssMI GATC 4 cut(s) 709, 1195, 1300, 1344
BssNAI GTATAC 1 cut(s) 1105
BssSI CACGAG 1 cut(s) 1134
BssT1I CCWWGG 1 cut(s) 495
Bst1107I GTATAC 1 cut(s) 1105
Bst2BI CACGAG 1 cut(s) 1134
Bst4CI ACNGT 7 cut(s) 292, 332, 391, 418, 526, 538, 1073
Bst6I CTCTTC 1 cut(s) 889
BstAPI GCANNNNNTGC 2 cut(s) 925, 1096
BstBAI YACGTR 1 cut(s) 97
BstC8I GCNNGC 6 cut(s) 304, 651, 1065, 1174, 1318, 1366
BstDEI CTNAG 7 cut(s) 230, 342, 501, 837, 946, 1082, 1288
BstF5I GGATG 6 cut(s) 239, 280, 426, 748, 921, 1147
BstFNI CGCG 2 cut(s) 123, 1124
BstH2I RGCGCY 2 cut(s) 563, 1323
BstHHI GCGC 2 cut(s) 562, 1322
BstKTI GATC 4 cut(s) 712, 1198, 1303, 1347
BstMAI GTCTC 1 cut(s) 40
BstMBI GATC 4 cut(s) 709, 1195, 1300, 1344
BstMWI GCNNNNNNNGC 9 cut(s) 165, 180, 312, 925, 1064, 1087, 1096, 1130, 1361
BstNSI RCATGY 1 cut(s) 306
BstSFI CTRYAG 2 cut(s) 720, 1128
BstSLI GKGCMC 1 cut(s) 670
BstUI CGCG 2 cut(s) 123, 1124
BstV1I GCAGC 5 cut(s) 155, 158, 410, 1102, 1214
BstV2I GAAGAC 1 cut(s) 222
BstZ17I GTATAC 1 cut(s) 1105
Bsu15I ATCGAT 1 cut(s) 628
BsuRI GGCC 3 cut(s) 159, 649, 955
BsuTUI ATCGAT 1 cut(s) 628
BtgZI GCGATG 1 cut(s) 366
BtsCI GGATG 6 cut(s) 239, 280, 426, 748, 921, 1147
BtsI GCAGTG 1 cut(s) 923
BtsIMutI CAGTG 4 cut(s) 387, 923, 1078, 1262
BveI ACCTGC 1 cut(s) 497
Cac8I GCNNGC 6 cut(s) 304, 651, 1065, 1174, 1318, 1366
CaiI CAGNNNCTG 2 cut(s) 251, 1250
CfoI GCGC 2 cut(s) 562, 1322
Cfr10I RCCGGY 2 cut(s) 816, 1021
Cfr13I GGNCC 2 cut(s) 581, 647
ClaI ATCGAT 1 cut(s) 628
Csp6I GTAC 1 cut(s) 1120
CspAI ACCGGT 2 cut(s) 816, 1021
CviAII CATG 8 cut(s) 148, 211, 303, 864, 932, 1111, 1199, 1337
CviQI GTAC 1 cut(s) 1120
DdeI CTNAG 7 cut(s) 230, 342, 501, 837, 946, 1082, 1288
DpnI GATC 4 cut(s) 711, 1197, 1302, 1346
DpnII GATC 4 cut(s) 709, 1195, 1300, 1344
DrdI GACNNNNNNGTC 1 cut(s) 579
DseDI GACNNNNNNGTC 1 cut(s) 579
EaeI YGGCCR 1 cut(s) 953
Eam1104I CTCTTC 1 cut(s) 889
EarI CTCTTC 1 cut(s) 889
Eco130I CCWWGG 1 cut(s) 495
Eco24I GRGCYC 1 cut(s) 1083
Eco47I GGWCC 1 cut(s) 581
Eco47III AGCGCT 1 cut(s) 1321
Eco57I CTGAAG 2 cut(s) 492, 576
EcoO109I RGGNCCY 1 cut(s) 647
EcoT14I CCWWGG 1 cut(s) 495
EcoT38I GRGCYC 1 cut(s) 1083
ErhI CCWWGG 1 cut(s) 495
FaeI CATG 8 cut(s) 151, 214, 306, 867, 935, 1114, 1202, 1340
FalI AAGNNNNNCTT 2 cut(s) 741, 773
FaqI GGGAC 4 cut(s) 63, 613, 881, 1385
FatI CATG 8 cut(s) 147, 210, 302, 863, 931, 1110, 1198, 1336
FbaI TGATCA 1 cut(s) 709
FblI GTMKAC 1 cut(s) 1104
Fnu4HI GCNGC 7 cut(s) 124, 169, 172, 424, 1091, 1125, 1203
FokI GGATG 6 cut(s) 226, 287, 413, 755, 928, 1154
FriOI GRGCYC 1 cut(s) 1083
Fsp4HI GCNGC 7 cut(s) 124, 169, 172, 424, 1091, 1125, 1203
FspBI CTAG 5 cut(s) 551, 891, 1064, 1317, 1365
GlaI GCGC 2 cut(s) 561, 1321
GluI GCNGC 7 cut(s) 124, 169, 172, 424, 1091, 1125, 1203
GsaI CCCAGC 2 cut(s) 657, 1372
GsuI CTGGAG 2 cut(s) 1272, 1344
HaeII RGCGCY 2 cut(s) 563, 1323
HaeIII GGCC 3 cut(s) 159, 649, 955
HapII CCGG 2 cut(s) 817, 1022
HhaI GCGC 2 cut(s) 562, 1322
Hin1II CATG 8 cut(s) 151, 214, 306, 867, 935, 1114, 1202, 1340
Hin6I GCGC 2 cut(s) 560, 1320
HinP1I GCGC 2 cut(s) 560, 1320
HincII GTYRAC 1 cut(s) 843
HindII GTYRAC 1 cut(s) 843
HindIII AAGCTT 1 cut(s) 103
HinfI GANTC 3 cut(s) 437, 860, 1373
HpaII CCGG 2 cut(s) 817, 1022
HphI GGTGA 4 cut(s) 541, 719, 806, 1126
Hpy166II GTNNAC 5 cut(s) 256, 843, 1019, 1105, 1262
Hpy188I TCNGA 5 cut(s) 287, 436, 585, 859, 977
Hpy188III TCNNGA 5 cut(s) 153, 266, 614, 1084, 1298
Hpy8I GTNNAC 5 cut(s) 256, 843, 1019, 1105, 1262
HpyAV CCTTC 6 cut(s) 211, 787, 1021, 1024, 1060, 1286
HpyCH4III ACNGT 7 cut(s) 292, 332, 391, 418, 526, 538, 1073
HpyCH4IV ACGT 1 cut(s) 96
HpyCH4V TGCA 8 cut(s) 295, 395, 426, 633, 919, 965, 1166, 1202
HpyF10VI GCNNNNNNNGC 9 cut(s) 165, 180, 312, 925, 1064, 1087, 1096, 1130, 1361
HpyF3I CTNAG 7 cut(s) 230, 342, 501, 837, 946, 1082, 1288
HpySE526I ACGT 1 cut(s) 96
Hsp92II CATG 8 cut(s) 151, 214, 306, 867, 935, 1114, 1202, 1340
HspAI GCGC 2 cut(s) 560, 1320
Ksp22I TGATCA 1 cut(s) 709
Kzo9I GATC 4 cut(s) 709, 1195, 1300, 1344
LmnI GCTCC 3 cut(s) 447, 933, 1325
Lsp1109I GCAGC 5 cut(s) 155, 158, 410, 1102, 1214
LweI GCATC 6 cut(s) 435, 620, 906, 1132, 1237, 1351
MaeI CTAG 5 cut(s) 551, 891, 1064, 1317, 1365
MaeII ACGT 1 cut(s) 96
MaeIII GTNAC 2 cut(s) 385, 1240
MalI GATC 4 cut(s) 711, 1197, 1302, 1346
MboI GATC 4 cut(s) 709, 1195, 1300, 1344
MboII GAAGA 7 cut(s) 6, 106, 227, 485, 488, 906, 1198
MfeI CAATTG 1 cut(s) 296
MhlI GDGCHC 2 cut(s) 670, 1083
MlsI TGGCCA 1 cut(s) 955
MluCI AATT 8 cut(s) 43, 269, 296, 376, 778, 828, 1036, 1311
MluNI TGGCCA 1 cut(s) 955
MlyI GAGTC 2 cut(s) 446, 1367
Mox20I TGGCCA 1 cut(s) 955
MroXI GAANNNNTTC 1 cut(s) 480
MscI TGGCCA 1 cut(s) 955
MseI TTAA 2 cut(s) 576, 734
Msp20I TGGCCA 1 cut(s) 955
MspA1I CMGCKG 1 cut(s) 1205
MspI CCGG 2 cut(s) 817, 1022
MunI CAATTG 1 cut(s) 296
Mva1269I GAATGC 1 cut(s) 551
MvnI CGCG 2 cut(s) 123, 1124
MwoI GCNNNNNNNGC 9 cut(s) 165, 180, 312, 925, 1064, 1087, 1096, 1130, 1361
NdeII GATC 4 cut(s) 709, 1195, 1300, 1344
NheI GCTAGC 3 cut(s) 1063, 1316, 1364
NlaIII CATG 8 cut(s) 151, 214, 306, 867, 935, 1114, 1202, 1340
NlaIV GGNNCC 1 cut(s) 1327
NmeAIII GCCGAG 1 cut(s) 1171
NmuCI GTSAC 1 cut(s) 385
NspI RCATGY 1 cut(s) 306
PaeI GCATGC 1 cut(s) 306
PaqCI CACCTGC 1 cut(s) 497
PctI GAATGC 1 cut(s) 551
PdmI GAANNNNTTC 1 cut(s) 480
PfeI GAWTC 1 cut(s) 860
PinAI ACCGGT 2 cut(s) 816, 1021
PkrI GCNGC 7 cut(s) 125, 170, 173, 425, 1092, 1126, 1204
PleI GAGTC 2 cut(s) 445, 1367
PpsI GAGTC 2 cut(s) 445, 1367
Ppu21I YACGTR 1 cut(s) 97
PshBI ATTAAT 1 cut(s) 734
PspFI CCCAGC 2 cut(s) 653, 1368
PspN4I GGNNCC 1 cut(s) 1327
PspPI GGNCC 2 cut(s) 581, 647
PstNI CAGNNNCTG 2 cut(s) 251, 1250
PvuII CAGCTG 1 cut(s) 1205
RsaI GTAC 1 cut(s) 1121
RsaNI GTAC 1 cut(s) 1120
SaqAI TTAA 2 cut(s) 576, 734
SatI GCNGC 7 cut(s) 124, 169, 172, 424, 1091, 1125, 1203
Sau3AI GATC 4 cut(s) 709, 1195, 1300, 1344
Sau96I GGNCC 2 cut(s) 581, 647
SchI GAGTC 2 cut(s) 446, 1367
SduI GDGCHC 2 cut(s) 670, 1083
SfaNI GCATC 6 cut(s) 435, 620, 906, 1132, 1237, 1351
SfcI CTRYAG 2 cut(s) 720, 1128
SinI GGWCC 1 cut(s) 581
SmlI CTYRAG 1 cut(s) 264
SmoI CTYRAG 1 cut(s) 264
SphI GCATGC 1 cut(s) 306
Sse9I AATT 8 cut(s) 43, 269, 296, 376, 778, 828, 1036, 1311
SsiI CCGC 2 cut(s) 123, 1124
SspMI CTAG 5 cut(s) 551, 891, 1064, 1317, 1365
StyI CCWWGG 1 cut(s) 495
TaaI ACNGT 7 cut(s) 292, 332, 391, 418, 526, 538, 1073
TaiI ACGT 1 cut(s) 99
TaqI TCGA 4 cut(s) 17, 628, 672, 1303
TasI AATT 8 cut(s) 43, 269, 296, 376, 778, 828, 1036, 1311
TauI GCSGC 2 cut(s) 126, 1127
TfiI GAWTC 1 cut(s) 860
Tru1I TTAA 2 cut(s) 576, 734
Tru9I TTAA 2 cut(s) 576, 734
TscAI CASTG 4 cut(s) 394, 930, 1078, 1269
TseFI GTSAC 1 cut(s) 385
TseI GCWGC 5 cut(s) 168, 171, 423, 1090, 1202
Tsp45I GTSAC 1 cut(s) 385
TspDTI ATGAA 4 cut(s) 73, 228, 558, 1172
TspRI CASTG 4 cut(s) 394, 930, 1078, 1269
VpaK11BI GGWCC 1 cut(s) 581
VspI ATTAAT 1 cut(s) 734
XapI RAATTY 1 cut(s) 1036
XceI RCATGY 1 cut(s) 306
XmiI GTMKAC 1 cut(s) 1104
XmnI GAANNNNTTC 1 cut(s) 480
XspI CTAG 5 cut(s) 551, 891, 1064, 1317, 1365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.