Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0002929

Physical Location & Seq

Genomic Coordinates Reverse (-)

45044845 .. 45047983

Gene Structure 3139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1323300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGGCTATAAAAATCTCACACAATTTGGGACTTGAAATATGGAATAACAATAACTTCATACGCAGCAACAAAACGCACCTCAACTTTTCAGGGAAACTTGGCTGCTGCTTGTCCAAGTTCGGGAAAACCCGATCCTTCTCTGTAATGGAGGACCTGAAAAGTTCGAGTCTTTTGGCCCCAGAGCCTGTGAAAAATTACTCCCAGGAATTGGATGTGGCTGTCAGAGCTGTGCAGTTGGCTTGCTCTCTCTGCCAGAGGGTTCAGAACAGTTTGATTTCGAAGAACGGCGATGGGGTCCAATCCAAAGACGACAATTCCCCTGTCACCGTTGCGGATTGGAGCGTCCAAGCAACTGTGAGCTGGATACTGTCAGAGTCTTTTGGGAGCAGCAACGTGTCCATTATTGCGGAAGAAGATATTCAAAATTTGTACAAAGCAAAGGCAGGTGGAGTACTAAAAGAAGTAGTGAAAACTGTAAACGAATGTCTAGCTGAAGCGCCTCGTTTTGGACTTAAAAGTCCGAAAATGGCCCTTGGGACTACAGAGGTTCTTGAAGCCATCAGTCGGTGCAACTCACTTGGAGGCCCTGCTGGGAGATTTTGGACACTTGACCCCGTTGATGGCACGTTGGGTTTTGTACGCGGGGACCAATATGCAATAGCTCTGGCTTTAATAGAGGACGGAGAAGTTGTGCTTGGGGTTCTTGGCTGTCCTAATTACCCAATGAGAAAGGAATGGCTCAATTATCATCACCGGTATCATAGGATTATATCTAAATTGACACCACCAACGTCAGAATCTTGGGACAAAGGCTGTGTGATTTATGCTAGAAGAGGCAGCGGCGAGGCTTGGATGCAACCGCTGCTCCATGTAAACAAGAATTTAGTGTGGCCAAACTCTGCAAAACCTGTCCGAGTGTCCACCATAGATAATCCATCACTGGCAACATTTTGTGAACCTGTTGAGAAGGCAAATTCGAGTCATTCCTTCACAGCAGGGCTAGCTCACAGCGTCGGGCTTAGGAAGCAGCCACTGCGAGTATACAGCATGGTGAAGTACGCAGCCATAGCTCGTGGGGATGCCGAGATTTTTATGAAGTTTTCAAGGGCTGGCTACAAGGAGAAGATTTGGGATCACGCAGCCGGTGTTGTTATCATACAAGAGGCTGGCGGGGTGGTTACAGATGCCGGAGGGCGTCCACTGGACTTTTCAAAGGGCATACACTTGGAAGGTCTTGATCGAGGCGTAGTTGCTAGTGCTGGAGCCAATCTACATGACAAGATCATCGAGGCCGTTGATGCTAGCTGGGACTCCTCCAGTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008252 GO:0008441 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 ko01130 map00920 map01100 map01120 map01130

Pfam Domains

Protein Families

Inositol_P

Protein Analysis

442

Amino Acids

47.97

Weight (kDa)

8.27

Isoelectric Point (pI)

38.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inositol_P	PF00459	104 - 435	4.3e-44	Inositol monophosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54390
fragaria_vesca	FvH4_3g04430 FvH4_3g04430 FvH4_3g04430 FvH4_3g04430 FvH4_3g04430 FvH4_3g20770 FvH4_3g20770
malus_domestica	MD03G1221700.v1.1 MD05G1323300.v1.1 MD10G1301100.v1.1 MD11G1239100.v1.1
prunus_persica	Prupe.4G039300_v2.0.a1 Prupe.4G187800_v2.0.a1
pyrus_communis	pycom03g17050 pycom05g29760 pycom10g25400 pycom11g21080
rosa_chinensis	RchiOBHm_Chr5g0006821 RchiOBHm_Chr5g0035001
rosa_laevigata	RLG00000031431 RLG00000033591
rosa_multiflora	Rmu_sc0001044.1_g000037
rosa_roxburghii	Rroxscaffold_1G00045390 Rroxscaffold_1G00069230
rosa_rugosa	Rorug04G0424700 Rorug05G0149400 Rorug05G0149500
rosa_samantha	Rh5AG052400 Rh5AG242500 Rh5BG051400 Rh5BG242100 Rh5CG060000 Rh5CG273500 Rh5DG050600 Rh5DG250600
rosa_wichuraiana	Rw5G005220 Rw5G022140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	434
AasI	GACNNNNNNGTC	1 cut(s)	516
Acc36I	ACCTGC	1 cut(s)	434
AccB7I	CCANNNNNTGG	1 cut(s)	208
AccI	GTMKAC	1 cut(s)	1041
AccII	CGCG	1 cut(s)	642
AciI	CCGC	6 cut(s)	332, 407, 642, 840, 860, 1170
AclWI	GGATC	2 cut(s)	126, 1140
AcoI	YGGCCR	1 cut(s)	890
AcsI	RAATTY	3 cut(s)	424, 880, 973
AcuI	CTGAAG	1 cut(s)	513
AcyI	GRCGYC	1 cut(s)	1195
AfaI	GTAC	4 cut(s)	431, 453, 639, 1058
AfiI	CCNNNNNNNGG	5 cut(s)	120, 208, 506, 564, 620
AflIII	ACRYGT	1 cut(s)	393
AgeI	ACCGGT	1 cut(s)	753
AgsI	TTSAA	5 cut(s)	35, 422, 554, 1104, 1212
AjnI	CCWGG	1 cut(s)	201
AjuI	GAANNNNNNNTTGG	2 cut(s)	678, 710
AluBI	AGCT	7 cut(s)	227, 360, 491, 662, 1004, 1070, 1305
AluI	AGCT	7 cut(s)	227, 360, 491, 662, 1004, 1070, 1305
AlwI	GGATC	2 cut(s)	126, 1140
AlwNI	CAGNNNCTG	2 cut(s)	185, 1033
AoxI	GGCC	5 cut(s)	174, 528, 583, 890, 1290
ApeKI	GCWGC	9 cut(s)	63, 102, 105, 387, 837, 862, 1027, 1061, 1139
ApoI	RAATTY	3 cut(s)	424, 880, 973
AsiGI	ACCGGT	1 cut(s)	753
Asp700I	GAANNNNTTC	1 cut(s)	417
AspLEI	GCGC	1 cut(s)	499
AspS9I	GGNCC	6 cut(s)	151, 175, 295, 529, 584, 646
AsuHPI	GGTGA	3 cut(s)	316, 743, 1063
AsuII	TTCGAA	1 cut(s)	278
AsuNHI	GCTAGC	2 cut(s)	1000, 1301
AvaII	GGWCC	3 cut(s)	151, 295, 646
BalI	TGGCCA	1 cut(s)	892
BauI	CACGAG	1 cut(s)	1071
BbvI	GCAGC	9 cut(s)	75, 89, 92, 399, 849, 849, 1039, 1073, 1151
BccI	CCATC	4 cut(s)	284, 566, 614, 943
BceAI	ACGGC	2 cut(s)	301, 1277
BciT130I	CCWGG	1 cut(s)	203
BciVI	GTATCC	1 cut(s)	357
BfaI	CTAG	5 cut(s)	488, 828, 1001, 1254, 1302
BfmI	CTRYAG	1 cut(s)	540
BfoI	RGCGCY	1 cut(s)	500
BfuAI	ACCTGC	1 cut(s)	434
BfuI	GTATCC	1 cut(s)	357
BmcAI	AGTACT	1 cut(s)	453
Bme1390I	CCNGG	1 cut(s)	203
Bme18I	GGWCC	3 cut(s)	151, 295, 646
BmgT120I	GGNCC	6 cut(s)	151, 175, 295, 529, 584, 646
BmiI	GGNNCC	4 cut(s)	177, 296, 647, 1264
BmrFI	CCNGG	1 cut(s)	203
BmsI	GCATC	4 cut(s)	843, 1069, 1174, 1288
BmtI	GCTAGC	2 cut(s)	1004, 1305
BpmI	CTGGAG	2 cut(s)	1281, 1300
Bpu10I	CCTNAGC	1 cut(s)	1019
Bpu14I	TTCGAA	1 cut(s)	278
BsaHI	GRCGYC	1 cut(s)	1195
BsaJI	CCNNGG	2 cut(s)	201, 532
BsaWI	WCCGGW	1 cut(s)	753
BsaXI	ACNNNNNCTCC	4 cut(s)	675, 705, 849, 879
Bsc4I	CCNNNNNNNGG	5 cut(s)	120, 208, 506, 564, 620
Bse118I	RCCGGY	2 cut(s)	753, 1142
Bse1I	ACTGG	3 cut(s)	945, 1206, 1317
BseBI	CCWGG	1 cut(s)	203
BseDI	CCNNGG	2 cut(s)	201, 532
BseGI	GGATG	3 cut(s)	217, 858, 1084
BseLI	CCNNNNNNNGG	5 cut(s)	120, 208, 506, 564, 620
BseNI	ACTGG	3 cut(s)	945, 1206, 1317
BseRI	GAGGAG	1 cut(s)	1303
BseXI	GCAGC	9 cut(s)	75, 89, 92, 399, 849, 849, 1039, 1073, 1151
BseYI	CCCAGC	2 cut(s)	590, 1305
BsgI	GTGCAG	1 cut(s)	251
Bsh1236I	CGCG	1 cut(s)	642
BshFI	GGCC	5 cut(s)	176, 530, 585, 892, 1292
BshTI	ACCGGT	1 cut(s)	753
BsiSI	CCGG	3 cut(s)	754, 1143, 1188
BslFI	GGGAC	5 cut(s)	42, 550, 659, 818, 1322
BslI	CCNNNNNNNGG	5 cut(s)	120, 208, 506, 564, 620
BsmFI	GGGAC	5 cut(s)	42, 550, 659, 818, 1322
BsnI	GGCC	5 cut(s)	176, 530, 585, 892, 1292
Bsp119I	TTCGAA	1 cut(s)	278
Bsp1407I	TGTACA	1 cut(s)	429
Bsp143I	GATC	4 cut(s)	131, 1132, 1237, 1281
BspACI	CCGC	6 cut(s)	332, 407, 642, 840, 860, 1170
BspANI	GGCC	5 cut(s)	176, 530, 585, 892, 1292
BspFNI	CGCG	1 cut(s)	642
BspLI	GGNNCC	4 cut(s)	177, 296, 647, 1264
BspMI	ACCTGC	1 cut(s)	434
BspOI	GCTAGC	2 cut(s)	1004, 1305
BspPI	GGATC	2 cut(s)	126, 1140
BspT104I	TTCGAA	1 cut(s)	278
BsrFI	RCCGGY	2 cut(s)	753, 1142
BsrGI	TGTACA	1 cut(s)	429
BsrI	ACTGG	3 cut(s)	945, 1206, 1317
BssAI	RCCGGY	2 cut(s)	753, 1142
BssECI	CCNNGG	2 cut(s)	201, 532
BssMI	GATC	4 cut(s)	131, 1132, 1237, 1281
BssNAI	GTATAC	1 cut(s)	1042
BssNI	GRCGYC	1 cut(s)	1195
BssSI	CACGAG	1 cut(s)	1071
BssT1I	CCWWGG	1 cut(s)	532
Bst1107I	GTATAC	1 cut(s)	1042
Bst2BI	CACGAG	1 cut(s)	1071
Bst2UI	CCWGG	1 cut(s)	203
Bst4CI	ACNGT	5 cut(s)	269, 328, 355, 369, 475
Bst6I	CTCTTC	1 cut(s)	826
BstACI	GRCGYC	1 cut(s)	1195
BstAPI	GCANNNNNTGC	2 cut(s)	862, 1033
BstAUI	TGTACA	1 cut(s)	429
BstBI	TTCGAA	1 cut(s)	278
BstC8I	GCNNGC	5 cut(s)	241, 1002, 1111, 1168, 1303
BstDEI	CTNAG	1 cut(s)	1019
BstF5I	GGATG	3 cut(s)	217, 858, 1084
BstFNI	CGCG	1 cut(s)	642
BstH2I	RGCGCY	1 cut(s)	500
BstHHI	GCGC	1 cut(s)	499
BstKTI	GATC	4 cut(s)	134, 1135, 1240, 1284
BstMBI	GATC	4 cut(s)	131, 1132, 1237, 1281
BstMWI	GCNNNNNNNGC	8 cut(s)	224, 249, 862, 1001, 1024, 1033, 1067, 1298
BstNI	CCWGG	1 cut(s)	203
BstSCI	CCNGG	1 cut(s)	201
BstSFI	CTRYAG	1 cut(s)	540
BstUI	CGCG	1 cut(s)	642
BstV1I	GCAGC	9 cut(s)	75, 89, 92, 399, 849, 849, 1039, 1073, 1151
BstZ17I	GTATAC	1 cut(s)	1042
BsuI	GTATCC	1 cut(s)	357
BsuRI	GGCC	5 cut(s)	176, 530, 585, 892, 1292
BtgZI	GCGATG	1 cut(s)	303
BtsCI	GGATG	3 cut(s)	217, 858, 1084
BtsI	GCAGTG	1 cut(s)	1031
BtsIMutI	CAGTG	3 cut(s)	938, 1031, 1199
BveI	ACCTGC	1 cut(s)	434
Cac8I	GCNNGC	5 cut(s)	241, 1002, 1111, 1168, 1303
CaiI	CAGNNNCTG	2 cut(s)	185, 1033
CfoI	GCGC	1 cut(s)	499
Cfr10I	RCCGGY	2 cut(s)	753, 1142
Cfr13I	GGNCC	6 cut(s)	151, 175, 295, 529, 584, 646
CseI	GACGC	3 cut(s)	331, 1000, 1184
Csp6I	GTAC	4 cut(s)	430, 452, 638, 1057
CspAI	ACCGGT	1 cut(s)	753
CviAII	CATG	3 cut(s)	869, 1048, 1274
CviQI	GTAC	4 cut(s)	430, 452, 638, 1057
DdeI	CTNAG	1 cut(s)	1019
DpnI	GATC	4 cut(s)	133, 1134, 1239, 1283
DpnII	GATC	4 cut(s)	131, 1132, 1237, 1281
DrdI	GACNNNNNNGTC	1 cut(s)	516
DseDI	GACNNNNNNGTC	1 cut(s)	516
EaeI	YGGCCR	1 cut(s)	890
Eam1104I	CTCTTC	1 cut(s)	826
EarI	CTCTTC	1 cut(s)	826
Eco130I	CCWWGG	1 cut(s)	532
Eco47I	GGWCC	3 cut(s)	151, 295, 646
Eco57I	CTGAAG	1 cut(s)	513
EcoO109I	RGGNCCY	2 cut(s)	151, 584
EcoRII	CCWGG	1 cut(s)	201
EcoT14I	CCWWGG	1 cut(s)	532
ErhI	CCWWGG	1 cut(s)	532
FaeI	CATG	3 cut(s)	872, 1051, 1277
FalI	AAGNNNNNCTT	2 cut(s)	678, 710
FaqI	GGGAC	5 cut(s)	42, 550, 659, 818, 1322
FatI	CATG	3 cut(s)	868, 1047, 1273
FauI	CCCGC	2 cut(s)	635, 1163
FblI	GTMKAC	1 cut(s)	1041
FokI	GGATG	3 cut(s)	224, 865, 1091
FspBI	CTAG	5 cut(s)	488, 828, 1001, 1254, 1302
GlaI	GCGC	1 cut(s)	498
GsaI	CCCAGC	2 cut(s)	594, 1309
GsuI	CTGGAG	2 cut(s)	1281, 1300
HaeII	RGCGCY	1 cut(s)	500
HaeIII	GGCC	5 cut(s)	176, 530, 585, 892, 1292
HapII	CCGG	3 cut(s)	754, 1143, 1188
HgaI	GACGC	3 cut(s)	331, 1000, 1184
HhaI	GCGC	1 cut(s)	499
Hin1I	GRCGYC	1 cut(s)	1195
Hin1II	CATG	3 cut(s)	872, 1051, 1277
Hin6I	GCGC	1 cut(s)	497
HinP1I	GCGC	1 cut(s)	497
HinfI	GANTC	5 cut(s)	166, 374, 797, 979, 1310
HpaII	CCGG	3 cut(s)	754, 1143, 1188
HphI	GGTGA	3 cut(s)	316, 743, 1063
Hpy166II	GTNNAC	6 cut(s)	478, 874, 921, 956, 1042, 1199
Hpy188I	TCNGA	6 cut(s)	224, 264, 373, 522, 796, 914
Hpy188III	TCNNGA	3 cut(s)	121, 551, 1235
Hpy8I	GTNNAC	6 cut(s)	478, 874, 921, 956, 1042, 1199
Hpy99I	CGWCG	1 cut(s)	1016
HpyAV	CCTTC	4 cut(s)	145, 961, 997, 1223
HpyCH4III	ACNGT	5 cut(s)	269, 328, 355, 369, 475
HpyCH4IV	ACGT	3 cut(s)	393, 626, 791
HpyCH4V	TGCA	5 cut(s)	232, 570, 656, 856, 902
HpyF10VI	GCNNNNNNNGC	8 cut(s)	224, 249, 862, 1001, 1024, 1033, 1067, 1298
HpyF3I	CTNAG	1 cut(s)	1019
HpySE526I	ACGT	3 cut(s)	393, 626, 791
Hsp92I	GRCGYC	1 cut(s)	1195
Hsp92II	CATG	3 cut(s)	872, 1051, 1277
HspAI	GCGC	1 cut(s)	497
Kzo9I	GATC	4 cut(s)	131, 1132, 1237, 1281
LmnI	GCTCC	4 cut(s)	339, 384, 870, 1262
Lsp1109I	GCAGC	9 cut(s)	75, 89, 92, 399, 849, 849, 1039, 1073, 1151
LweI	GCATC	4 cut(s)	843, 1069, 1174, 1288
MaeI	CTAG	5 cut(s)	488, 828, 1001, 1254, 1302
MaeII	ACGT	3 cut(s)	393, 626, 791
MaeIII	GTNAC	2 cut(s)	322, 1177
MalI	GATC	4 cut(s)	133, 1134, 1239, 1283
MboI	GATC	4 cut(s)	131, 1132, 1237, 1281
MboII	GAAGA	5 cut(s)	292, 422, 425, 843, 1135
MlsI	TGGCCA	1 cut(s)	892
MluNI	TGGCCA	1 cut(s)	892
MlyI	GAGTC	4 cut(s)	175, 383, 988, 1304
Mox20I	TGGCCA	1 cut(s)	892
MroXI	GAANNNNTTC	1 cut(s)	417
MscI	TGGCCA	1 cut(s)	892
MseI	TTAA	2 cut(s)	513, 671
Msp20I	TGGCCA	1 cut(s)	892
MspA1I	CMGCKG	2 cut(s)	840, 862
MspI	CCGG	3 cut(s)	754, 1143, 1188
MspR9I	CCNGG	1 cut(s)	203
MvaI	CCWGG	1 cut(s)	203
MvnI	CGCG	1 cut(s)	642
MwoI	GCNNNNNNNGC	8 cut(s)	224, 249, 862, 1001, 1024, 1033, 1067, 1298
NdeII	GATC	4 cut(s)	131, 1132, 1237, 1281
NheI	GCTAGC	2 cut(s)	1000, 1301
NlaIII	CATG	3 cut(s)	872, 1051, 1277
NlaIV	GGNNCC	4 cut(s)	177, 296, 647, 1264
NmeAIII	GCCGAG	1 cut(s)	1108
NmuCI	GTSAC	1 cut(s)	322
NspV	TTCGAA	1 cut(s)	278
PaqCI	CACCTGC	1 cut(s)	434
PdmI	GAANNNNTTC	1 cut(s)	417
PfeI	GAWTC	1 cut(s)	797
PflMI	CCANNNNNTGG	1 cut(s)	208
PinAI	ACCGGT	1 cut(s)	753
PleI	GAGTC	4 cut(s)	174, 382, 987, 1304
PpsI	GAGTC	4 cut(s)	174, 382, 987, 1304
PpuMI	RGGWCCY	1 cut(s)	151
Psp5II	RGGWCCY	1 cut(s)	151
Psp6I	CCWGG	1 cut(s)	201
PspFI	CCCAGC	2 cut(s)	590, 1305
PspGI	CCWGG	1 cut(s)	201
PspN4I	GGNNCC	4 cut(s)	177, 296, 647, 1264
PspPI	GGNCC	6 cut(s)	151, 175, 295, 529, 584, 646
PspPPI	RGGWCCY	1 cut(s)	151
PstNI	CAGNNNCTG	2 cut(s)	185, 1033
RsaI	GTAC	4 cut(s)	431, 453, 639, 1058
RsaNI	GTAC	4 cut(s)	430, 452, 638, 1057
SaqAI	TTAA	2 cut(s)	513, 671
Sau3AI	GATC	4 cut(s)	131, 1132, 1237, 1281
Sau96I	GGNCC	6 cut(s)	151, 175, 295, 529, 584, 646
ScaI	AGTACT	1 cut(s)	453
SchI	GAGTC	4 cut(s)	175, 383, 988, 1304
ScrFI	CCNGG	1 cut(s)	203
SfaNI	GCATC	4 cut(s)	843, 1069, 1174, 1288
SfcI	CTRYAG	1 cut(s)	540
SfuI	TTCGAA	1 cut(s)	278
SinI	GGWCC	3 cut(s)	151, 295, 646
SsiI	CCGC	6 cut(s)	332, 407, 642, 840, 860, 1170
SspMI	CTAG	5 cut(s)	488, 828, 1001, 1254, 1302
StyD4I	CCNGG	1 cut(s)	201
StyI	CCWWGG	1 cut(s)	532
TaaI	ACNGT	5 cut(s)	269, 328, 355, 369, 475
TaiI	ACGT	3 cut(s)	396, 629, 794
TaqI	TCGA	5 cut(s)	164, 278, 977, 1240, 1287
TatI	WGTACW	2 cut(s)	429, 451
TauI	GCSGC	1 cut(s)	843
TfiI	GAWTC	1 cut(s)	797
Tru1I	TTAA	2 cut(s)	513, 671
Tru9I	TTAA	2 cut(s)	513, 671
TscAI	CASTG	3 cut(s)	945, 1038, 1206
TseFI	GTSAC	1 cut(s)	322
TseI	GCWGC	9 cut(s)	63, 102, 105, 387, 837, 862, 1027, 1061, 1139
Tsp45I	GTSAC	1 cut(s)	322
TspDTI	ATGAA	2 cut(s)	46, 1109
TspGWI	ACGGA	1 cut(s)	696
TspRI	CASTG	3 cut(s)	945, 1038, 1206
Van91I	CCANNNNNTGG	1 cut(s)	208
VpaK11BI	GGWCC	3 cut(s)	151, 295, 646
XapI	RAATTY	3 cut(s)	424, 880, 973
XmiI	GTMKAC	1 cut(s)	1041
XmnI	GAANNNNTTC	1 cut(s)	417
XspI	CTAG	5 cut(s)	488, 828, 1001, 1254, 1302
ZrmI	AGTACT	1 cut(s)	453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.