Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0001230

Physical Location & Seq

Genomic Coordinates Reverse (-)

27692689 .. 27696188

Gene Structure 3500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1133100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGTGATTTCGAGCTTCGGAATCGCCTGCCGACCCCATTTCTGCCTACGTGCTCCTCCGTTTCACTGCATCAGCAAGGTGCAAGTGAACTTGGTCGCGGCAATGGAGGCGCTTGATGAGCCGGAGGGTCTGTTTAAGAACAATAAAAGCAGTAATTCTGCCAATGGAAGAAAAGATGCTAAGGCGCCGGCATGGAAGAAGTTGAATTCCACAGAGCTTGGGATTACTACTTCAATGATCGACAAGCCTACTCGAAAGGTTCTCAATGGGCTAAAGCGAAAGGGCTATGAGGTGTATCTTGTAGGAGGTTGTGTAAGGGATCTTATATTAAACCGGACGCCAAAGGACTTTGACATAATAACTTCAGCTGAACTGAAGGAGGTGACAAGAACATTTTCTTGGTGTGAAATAGTTGGCAAGCGGTTTCCCATATGTCATGTGCACATTTGTGATACAGTTATTGAGGTCTCAAGTTTTAGCATCTCCGCACGTAAGTCTGGCAGAAACATAAGTCGTGATTTCAGGAAACCAAATCACTGTGACGACATTGATTATATGCGTTGGATGAATTGTTCGCAGCGTGACTTTACAATTAACGGGTTGATGTTTGATCCTTATGCCAGGATAGTGTACGACTACATGGGAGGCATTGAAGATATTAGAAAAGCTAAAGTCCAAACCGTGATACCTGCAAGTACTTCTTTTCAAGAGGATTGTGCTCGCATTCTACGTGCAATAAGAATTGCTGCCCGATTAGGATTTCGTATTTCCAAGGAAACAGCTCATTCTGTTAAAAGTTTATCTTATTCAATACTTAGGCTTGATAAGGGAAGGCTCCTCATGGAAATGAACTACATGTTAGCGTATGGTTCTGCCGAAGCTTCTTTAAGGTTGTTATGGAAATTTGGACTTTTAGAACTGCTTCTTCCTATCCAGGCAGCATATTTTGTTCGCCATGGTTTTCGAAGACGCGACAAAAGGACCAACCTGCTTTTGTCCCTTTTTTCTAACTTGGATAAACTTCTTTCGCCTGACAAGCCATGCCACAGTAGCTTATGGGTTGCGATCTTAGCATTCCACAATGCACTATCCGAACAACCTCGGGATCCGTTGGTGGTTGCTGCACTTAGCCTTGCAATTCACAATGGTGGAGATATGTTAGAAGCAGTAAGCATAGCCAAGAGAGTCACTAAAGTACACGATGTTAGCTTTCACGAGTTATTAGAAAATCAGAATTTGAATCCTCGAGCATTGAGAGATGAAGTTGTGAATCTCGTAACATCTCTTAAGCGTGCCCTCAATAATATGACTGATGAGCAAATAGTCTCTCAGGCAATGGCAGCGTACCCACAAGCGCCATATTCGGATCTGGTGCTTATCCCGTGGGGATTATCTTTGAGGGTCTGCCGGATTTTTAGCTGCATAACGTCAGGCGCAGAGAGGGGATTCATCCCGAAGCAGGGCAGCAAGATTGATTATGAGTCATTAGCTCAGGGAGCCCTGCCGGAAGTTCGGCATATTTTCGCAAGAGTTGTGTTCGATACCATATATCCTCTTAGTCTAAATCGTGATAATGCTCAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

529

Amino Acids

59.53

Weight (kDa)

9.34

Isoelectric Point (pI)

38.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	98 - 225	2.8e-22	Poly A polymerase head domain
PolyA_pol_RNAbd	PF12627	253 - 314	3.2e-14	Probable RNA and SrmB- binding site of polymerase A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001230)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28090 AT1G28090 AT1G28090 AT1G28090 AT1G28090 AT3G48830 AT5G23690
fragaria_vesca	FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09270
malus_domestica	MD06G1133100.v1.1 MD14G1149300.v1.1 MD14G1149500.v1.1
prunus_persica	Prupe.5G144000_v2.0.a1 Prupe.5G144300_v2.0.a1
pyrus_communis	pycom06g12450 pycom14g12410
rosa_chinensis	RchiOBHm_Chr3g0469071 RchiOBHm_Chr7g0189011
rosa_laevigata	RLG00000004641 RLG00000024375 RLG00000024379 RLG00000024383 RLG00000024385
rosa_multiflora	Rmu_sc0000302.1_g000052 Rmu_sc0000326.1_g000001 Rmu_sc0007139.1_g000009 Rmu_sc0016080.1_g000004
rosa_roxburghii	Rroxscaffold_3G00265860
rosa_rugosa	Rorug03G0099300 Rorug06G0495400 Rorug06G0495500
rosa_samantha	Rh3AG148200 Rh3AG148500 Rh3BG171000 Rh3BG171100 Rh3BG171500 Rh7AG100100 Rh7BG102400 Rh7CG104000 Rh7DG102100
rosa_wichuraiana	Rw0G010940 Rw0G014560 Rw0G014590 Rw7G008650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	697, 996
AccB1I	GGYRCC	1 cut(s)	184
AccII	CGCG	2 cut(s)	98, 972
AciI	CCGC	3 cut(s)	98, 421, 486
AclWI	GGATC	5 cut(s)	327, 605, 1100, 1113, 1374
AcsI	RAATTY	3 cut(s)	205, 902, 1234
AcuI	CTGAAG	2 cut(s)	348, 395
AcyI	GRCGYC	2 cut(s)	185, 338
AfaI	GTAC	4 cut(s)	632, 697, 1197, 1346
AfiI	CCNNNNNNNGG	2 cut(s)	1459, 1460
AflII	CTTAAG	1 cut(s)	1286
AflIII	ACRYGT	1 cut(s)	855
AgsI	TTSAA	6 cut(s)	205, 234, 653, 707, 810, 1240
AjnI	CCWGG	2 cut(s)	620, 933
AjuI	GAANNNNNNNTTGG	2 cut(s)	382, 414
AleI	CACNNNNGTG	2 cut(s)	447, 1146
AloI	GAACNNNNNNTCC	2 cut(s)	556, 588
Alw21I	GWGCWC	3 cut(s)	55, 444, 721
Alw26I	GTCTC	2 cut(s)	472, 1330
Alw44I	GTGCAC	1 cut(s)	440
AlwI	GGATC	5 cut(s)	327, 605, 1100, 1113, 1374
Ama87I	CYCGRG	2 cut(s)	1101, 1245
ApaLI	GTGCAC	1 cut(s)	440
ApeKI	GCWGC	7 cut(s)	577, 746, 938, 1121, 1340, 1419, 1464
ApoI	RAATTY	3 cut(s)	205, 902, 1234
Asp700I	GAANNNNTTC	2 cut(s)	394, 921
AspLEI	GCGC	4 cut(s)	112, 187, 1357, 1436
AspS9I	GGNCC	1 cut(s)	981
AsuHPI	GGTGA	2 cut(s)	16, 394
AsuII	TTCGAA	1 cut(s)	964
AvaI	CYCGRG	2 cut(s)	1101, 1245
AvaII	GGWCC	1 cut(s)	981
BaeGI	GKGCMC	2 cut(s)	444, 1297
BamHI	GGATCC	1 cut(s)	1105
BanI	GGYRCC	1 cut(s)	184
BanII	GRGCYC	1 cut(s)	1501
BauI	CACGAG	1 cut(s)	1214
BbsI	GAAGAC	1 cut(s)	973
Bbv12I	GWGCWC	3 cut(s)	55, 444, 721
BbvI	GCAGC	7 cut(s)	589, 733, 950, 1108, 1352, 1406, 1476
BciT130I	CCWGG	2 cut(s)	622, 935
BcoDI	GTCTC	2 cut(s)	472, 1330
BfoI	RGCGCY	3 cut(s)	113, 188, 1358
BfrI	CTTAAG	1 cut(s)	1286
BfuAI	ACCTGC	2 cut(s)	697, 996
BisI	GCNGC	8 cut(s)	99, 578, 747, 939, 1122, 1341, 1420, 1465
BlsI	GCNGC	8 cut(s)	100, 579, 748, 940, 1123, 1342, 1421, 1466
BmcAI	AGTACT	1 cut(s)	697
Bme1390I	CCNGG	2 cut(s)	622, 935
Bme18I	GGWCC	1 cut(s)	981
BmeT110I	CYCGRG	2 cut(s)	1101, 1245
BmgT120I	GGNCC	1 cut(s)	981
BmiI	GGNNCC	4 cut(s)	186, 836, 1107, 1498
BmrFI	CCNGG	2 cut(s)	622, 935
BmsI	GCATC	3 cut(s)	78, 166, 489
BpiI	GAAGAC	1 cut(s)	973
Bpu10I	CCTNAGC	2 cut(s)	180, 1491
Bpu14I	TTCGAA	1 cut(s)	964
BpuEI	CTTGAG	1 cut(s)	454
BsaAI	YACGTR	3 cut(s)	50, 491, 731
BsaHI	GRCGYC	2 cut(s)	185, 338
BsaI	GGTCTC	1 cut(s)	472
BsaJI	CCNNGG	4 cut(s)	771, 955, 1100, 1382
BsaWI	WCCGGW	1 cut(s)	333
BsaXI	ACNNNNNCTCC	4 cut(s)	116, 146, 297, 327
Bsc4I	CCNNNNNNNGG	2 cut(s)	1459, 1460
Bse118I	RCCGGY	1 cut(s)	187
Bse3DI	GCAATG	2 cut(s)	108, 1341
BseBI	CCWGG	2 cut(s)	622, 935
BseDI	CCNNGG	4 cut(s)	771, 955, 1100, 1382
BseGI	GGATG	2 cut(s)	570, 1449
BseLI	CCNNNNNNNGG	2 cut(s)	1459, 1460
BseMI	GCAATG	2 cut(s)	108, 1341
BseMII	CTCAG	2 cut(s)	1343, 1505
BseRI	GAGGAG	2 cut(s)	45, 827
BseSI	GKGCMC	2 cut(s)	444, 1297
BseXI	GCAGC	7 cut(s)	589, 733, 950, 1108, 1352, 1406, 1476
BsgI	GTGCAG	1 cut(s)	1107
Bsh1236I	CGCG	2 cut(s)	98, 972
BshNI	GGYRCC	1 cut(s)	184
BsiHKAI	GWGCWC	3 cut(s)	55, 444, 721
BsiHKCI	CYCGRG	2 cut(s)	1101, 1245
BsiSI	CCGG	5 cut(s)	122, 188, 334, 1408, 1505
BslFI	GGGAC	1 cut(s)	982
BslI	CCNNNNNNNGG	2 cut(s)	1459, 1460
BsmAI	GTCTC	2 cut(s)	472, 1330
BsmFI	GGGAC	1 cut(s)	982
BsmI	GAATGC	2 cut(s)	723, 1073
Bso31I	GGTCTC	1 cut(s)	472
BsoBI	CYCGRG	2 cut(s)	1101, 1245
Bsp119I	TTCGAA	1 cut(s)	964
Bsp1286I	GDGCHC	5 cut(s)	55, 444, 721, 1297, 1501
Bsp143I	GATC	6 cut(s)	237, 319, 610, 1065, 1105, 1366
Bsp19I	CCATGG	1 cut(s)	955
BspACI	CCGC	3 cut(s)	98, 421, 486
BspCNI	CTCAG	2 cut(s)	1342, 1504
BspFNI	CGCG	2 cut(s)	98, 972
BspLI	GGNNCC	4 cut(s)	186, 836, 1107, 1498
BspMI	ACCTGC	2 cut(s)	697, 996
BspPI	GGATC	5 cut(s)	327, 605, 1100, 1113, 1374
BspT104I	TTCGAA	1 cut(s)	964
BspT107I	GGYRCC	1 cut(s)	184
BspTI	CTTAAG	1 cut(s)	1286
BspTNI	GGTCTC	1 cut(s)	472
BsrDI	GCAATG	2 cut(s)	108, 1341
BsrFI	RCCGGY	1 cut(s)	187
BssAI	RCCGGY	1 cut(s)	187
BssECI	CCNNGG	4 cut(s)	771, 955, 1100, 1382
BssMI	GATC	6 cut(s)	237, 319, 610, 1065, 1105, 1366
BssNI	GRCGYC	2 cut(s)	185, 338
BssSI	CACGAG	1 cut(s)	1214
BssT1I	CCWWGG	2 cut(s)	771, 955
Bst2BI	CACGAG	1 cut(s)	1214
Bst2UI	CCWGG	2 cut(s)	622, 935
Bst4CI	ACNGT	4 cut(s)	457, 539, 682, 1049
BstACI	GRCGYC	2 cut(s)	185, 338
BstAFI	CTTAAG	1 cut(s)	1286
BstBAI	YACGTR	3 cut(s)	50, 491, 731
BstBI	TTCGAA	1 cut(s)	964
BstC8I	GCNNGC	5 cut(s)	28, 189, 419, 721, 1293
BstDEI	CTNAG	7 cut(s)	180, 815, 1069, 1127, 1329, 1491, 1556
BstDSI	CCRYGG	2 cut(s)	955, 1382
BstF5I	GGATG	2 cut(s)	570, 1449
BstFNI	CGCG	2 cut(s)	98, 972
BstH2I	RGCGCY	3 cut(s)	113, 188, 1358
BstHHI	GCGC	4 cut(s)	112, 187, 1357, 1436
BstKTI	GATC	6 cut(s)	240, 322, 613, 1068, 1108, 1369
BstMAI	GTCTC	2 cut(s)	472, 1330
BstMBI	GATC	6 cut(s)	237, 319, 610, 1065, 1105, 1366
BstMWI	GCNNNNNNNGC	7 cut(s)	107, 118, 1036, 1050, 1070, 1340, 1496
BstNI	CCWGG	2 cut(s)	622, 935
BstNSI	RCATGY	1 cut(s)	859
BstSCI	CCNGG	2 cut(s)	620, 933
BstSLI	GKGCMC	2 cut(s)	444, 1297
BstUI	CGCG	2 cut(s)	98, 972
BstV1I	GCAGC	7 cut(s)	589, 733, 950, 1108, 1352, 1406, 1476
BstV2I	GAAGAC	1 cut(s)	973
BstX2I	RGATCY	3 cut(s)	319, 1105, 1366
BstYI	RGATCY	3 cut(s)	319, 1105, 1366
BtgI	CCRYGG	2 cut(s)	955, 1382
BtsCI	GGATG	2 cut(s)	570, 1449
BtsI	GCAGTG	1 cut(s)	64
BtsIMutI	CAGTG	2 cut(s)	64, 535
BveI	ACCTGC	2 cut(s)	697, 996
Cac8I	GCNNGC	5 cut(s)	28, 189, 419, 721, 1293
CfoI	GCGC	4 cut(s)	112, 187, 1357, 1436
Cfr10I	RCCGGY	1 cut(s)	187
Cfr13I	GGNCC	1 cut(s)	981
CseI	GACGC	2 cut(s)	346, 978
Csp6I	GTAC	4 cut(s)	631, 696, 1196, 1345
CspCI	CAANNNNNGTGG	2 cut(s)	199, 234
CviAII	CATG	8 cut(s)	192, 437, 640, 841, 856, 956, 1041, 1584
CviQI	GTAC	4 cut(s)	631, 696, 1196, 1345
DdeI	CTNAG	7 cut(s)	180, 815, 1069, 1127, 1329, 1491, 1556
DinI	GGCGCC	1 cut(s)	186
DpnI	GATC	6 cut(s)	239, 321, 612, 1067, 1107, 1368
DpnII	GATC	6 cut(s)	237, 319, 610, 1065, 1105, 1366
Eco130I	CCWWGG	2 cut(s)	771, 955
Eco24I	GRGCYC	1 cut(s)	1501
Eco31I	GGTCTC	1 cut(s)	472
Eco47I	GGWCC	1 cut(s)	981
Eco57I	CTGAAG	2 cut(s)	348, 395
Eco88I	CYCGRG	2 cut(s)	1101, 1245
EcoRI	GAATTC	1 cut(s)	205
EcoRII	CCWGG	2 cut(s)	620, 933
EcoT14I	CCWWGG	2 cut(s)	771, 955
EcoT38I	GRGCYC	1 cut(s)	1501
EgeI	GGCGCC	1 cut(s)	186
EheI	GGCGCC	1 cut(s)	186
ErhI	CCWWGG	2 cut(s)	771, 955
FaeI	CATG	8 cut(s)	195, 440, 643, 844, 859, 959, 1044, 1587
FalI	AAGNNNNNCTT	4 cut(s)	685, 717, 787, 819
FaqI	GGGAC	1 cut(s)	982
FatI	CATG	8 cut(s)	191, 436, 639, 840, 855, 955, 1040, 1583
FauNDI	CATATG	1 cut(s)	431
Fnu4HI	GCNGC	8 cut(s)	99, 578, 747, 939, 1122, 1341, 1420, 1465
FokI	GGATG	2 cut(s)	577, 1436
FriOI	GRGCYC	1 cut(s)	1501
Fsp4HI	GCNGC	8 cut(s)	99, 578, 747, 939, 1122, 1341, 1420, 1465
GlaI	GCGC	4 cut(s)	111, 186, 1356, 1435
GluI	GCNGC	8 cut(s)	99, 578, 747, 939, 1122, 1341, 1420, 1465
HaeII	RGCGCY	3 cut(s)	113, 188, 1358
HapII	CCGG	5 cut(s)	122, 188, 334, 1408, 1505
HgaI	GACGC	2 cut(s)	346, 978
HhaI	GCGC	4 cut(s)	112, 187, 1357, 1436
Hin1I	GRCGYC	2 cut(s)	185, 338
Hin1II	CATG	8 cut(s)	195, 440, 643, 844, 859, 959, 1044, 1587
Hin6I	GCGC	4 cut(s)	110, 185, 1355, 1434
HinP1I	GCGC	4 cut(s)	110, 185, 1355, 1434
HindIII	AAGCTT	1 cut(s)	879
HinfI	GANTC	6 cut(s)	21, 1185, 1240, 1270, 1446, 1481
HpaII	CCGG	5 cut(s)	122, 188, 334, 1408, 1505
HphI	GGTGA	2 cut(s)	16, 394
Hpy166II	GTNNAC	4 cut(s)	88, 442, 631, 1198
Hpy188I	TCNGA	4 cut(s)	20, 1093, 1233, 1366
Hpy188III	TCNNGA	7 cut(s)	515, 523, 707, 1103, 1214, 1453, 1568
Hpy8I	GTNNAC	4 cut(s)	88, 442, 631, 1198
HpyAV	CCTTC	2 cut(s)	370, 825
HpyCH4III	ACNGT	4 cut(s)	457, 539, 682, 1049
HpyCH4IV	ACGT	4 cut(s)	49, 490, 730, 1427
HpyCH4V	TGCA	9 cut(s)	69, 82, 442, 692, 734, 1085, 1124, 1136, 1422
HpyF10VI	GCNNNNNNNGC	7 cut(s)	107, 118, 1036, 1050, 1070, 1340, 1496
HpyF3I	CTNAG	7 cut(s)	180, 815, 1069, 1127, 1329, 1491, 1556
HpySE526I	ACGT	4 cut(s)	49, 490, 730, 1427
Hsp92I	GRCGYC	2 cut(s)	185, 338
Hsp92II	CATG	8 cut(s)	195, 440, 643, 844, 859, 959, 1044, 1587
HspAI	GCGC	4 cut(s)	110, 185, 1355, 1434
KasI	GGCGCC	1 cut(s)	184
KroI	GCCGGC	1 cut(s)	187
KroNI	GCCGGC	1 cut(s)	189
Kzo9I	GATC	6 cut(s)	237, 319, 610, 1065, 1105, 1366
LmnI	GCTCC	3 cut(s)	58, 840, 1496
Lsp1109I	GCAGC	7 cut(s)	589, 733, 950, 1108, 1352, 1406, 1476
LweI	GCATC	3 cut(s)	78, 166, 489
MaeII	ACGT	4 cut(s)	49, 490, 730, 1427
MaeIII	GTNAC	5 cut(s)	382, 539, 581, 1186, 1276
MalI	GATC	6 cut(s)	239, 321, 612, 1067, 1107, 1368
MboI	GATC	6 cut(s)	237, 319, 610, 1065, 1105, 1366
MboII	GAAGA	5 cut(s)	180, 208, 665, 917, 978
MflI	RGATCY	3 cut(s)	319, 1105, 1366
MhlI	GDGCHC	5 cut(s)	55, 444, 721, 1297, 1501
MluCI	AATT	8 cut(s)	154, 205, 568, 591, 741, 902, 1137, 1234
Mly113I	GGCGCC	1 cut(s)	185
MlyI	GAGTC	2 cut(s)	1194, 1490
MmeI	TCCRAC	1 cut(s)	542
MroNI	GCCGGC	1 cut(s)	187
MroXI	GAANNNNTTC	2 cut(s)	394, 921
MseI	TTAA	6 cut(s)	135, 329, 594, 792, 887, 1287
MslI	CAYNNNNRTG	3 cut(s)	447, 845, 1146
MspA1I	CMGCKG	1 cut(s)	368
MspCI	CTTAAG	1 cut(s)	1286
MspI	CCGG	5 cut(s)	122, 188, 334, 1408, 1505
MspR9I	CCNGG	2 cut(s)	622, 935
Mva1269I	GAATGC	2 cut(s)	723, 1073
MvaI	CCWGG	2 cut(s)	622, 935
MvnI	CGCG	2 cut(s)	98, 972
MwoI	GCNNNNNNNGC	7 cut(s)	107, 118, 1036, 1050, 1070, 1340, 1496
NaeI	GCCGGC	1 cut(s)	189
NarI	GGCGCC	1 cut(s)	185
NcoI	CCATGG	1 cut(s)	955
NdeI	CATATG	1 cut(s)	431
NdeII	GATC	6 cut(s)	237, 319, 610, 1065, 1105, 1366
NgoMIV	GCCGGC	1 cut(s)	187
NlaIII	CATG	8 cut(s)	195, 440, 643, 844, 859, 959, 1044, 1587
NlaIV	GGNNCC	4 cut(s)	186, 836, 1107, 1498
NmuCI	GTSAC	4 cut(s)	382, 539, 581, 1186
NspI	RCATGY	1 cut(s)	859
NspV	TTCGAA	1 cut(s)	964
OliI	CACNNNNGTG	2 cut(s)	447, 1146
PaeR7I	CTCGAG	1 cut(s)	1245
PciI	ACATGT	1 cut(s)	855
PcsI	WCGNNNNNNNCGW	1 cut(s)	727
PctI	GAATGC	2 cut(s)	723, 1073
PdiI	GCCGGC	1 cut(s)	189
PdmI	GAANNNNTTC	2 cut(s)	394, 921
PfeI	GAWTC	4 cut(s)	21, 1240, 1270, 1446
PkrI	GCNGC	8 cut(s)	100, 579, 748, 940, 1123, 1342, 1421, 1466
PleI	GAGTC	2 cut(s)	1193, 1489
PluTI	GGCGCC	1 cut(s)	188
PpsI	GAGTC	2 cut(s)	1193, 1489
Ppu21I	YACGTR	3 cut(s)	50, 491, 731
PscI	ACATGT	1 cut(s)	855
Psp6I	CCWGG	2 cut(s)	620, 933
PspGI	CCWGG	2 cut(s)	620, 933
PspN4I	GGNNCC	4 cut(s)	186, 836, 1107, 1498
PspPI	GGNCC	1 cut(s)	981
PspXI	VCTCGAGB	1 cut(s)	1245
PsuI	RGATCY	3 cut(s)	319, 1105, 1366
PvuII	CAGCTG	1 cut(s)	368
RsaI	GTAC	4 cut(s)	632, 697, 1197, 1346
RsaNI	GTAC	4 cut(s)	631, 696, 1196, 1345
RseI	CAYNNNNRTG	3 cut(s)	447, 845, 1146
SaqAI	TTAA	6 cut(s)	135, 329, 594, 792, 887, 1287
SatI	GCNGC	8 cut(s)	99, 578, 747, 939, 1122, 1341, 1420, 1465
Sau3AI	GATC	6 cut(s)	237, 319, 610, 1065, 1105, 1366
Sau96I	GGNCC	1 cut(s)	981
ScaI	AGTACT	1 cut(s)	697
SchI	GAGTC	2 cut(s)	1194, 1490
ScrFI	CCNGG	2 cut(s)	622, 935
SduI	GDGCHC	5 cut(s)	55, 444, 721, 1297, 1501
SfaNI	GCATC	3 cut(s)	78, 166, 489
SfoI	GGCGCC	1 cut(s)	186
Sfr274I	CTCGAG	1 cut(s)	1245
SfuI	TTCGAA	1 cut(s)	964
SinI	GGWCC	1 cut(s)	981
SlaI	CTCGAG	1 cut(s)	1245
SmiMI	CAYNNNNRTG	3 cut(s)	447, 845, 1146
SmlI	CTYRAG	3 cut(s)	469, 1245, 1286
SmoI	CTYRAG	3 cut(s)	469, 1245, 1286
Sse9I	AATT	8 cut(s)	154, 205, 568, 591, 741, 902, 1137, 1234
SsiI	CCGC	3 cut(s)	98, 421, 486
SspDI	GGCGCC	1 cut(s)	184
StyD4I	CCNGG	2 cut(s)	620, 933
StyI	CCWWGG	2 cut(s)	771, 955
TaaI	ACNGT	4 cut(s)	457, 539, 682, 1049
TaiI	ACGT	4 cut(s)	52, 493, 733, 1430
TaqI	TCGA	6 cut(s)	11, 240, 253, 964, 1246, 1539
TasI	AATT	8 cut(s)	154, 205, 568, 591, 741, 902, 1137, 1234
TatI	WGTACW	2 cut(s)	695, 1195
TauI	GCSGC	1 cut(s)	101
TfiI	GAWTC	4 cut(s)	21, 1240, 1270, 1446
Tru1I	TTAA	6 cut(s)	135, 329, 594, 792, 887, 1287
Tru9I	TTAA	6 cut(s)	135, 329, 594, 792, 887, 1287
TscAI	CASTG	2 cut(s)	71, 542
TseFI	GTSAC	4 cut(s)	382, 539, 581, 1186
TseI	GCWGC	7 cut(s)	577, 746, 938, 1121, 1340, 1419, 1464
Tsp45I	GTSAC	4 cut(s)	382, 539, 581, 1186
TspDTI	ATGAA	4 cut(s)	581, 863, 1275, 1438
TspGWI	ACGGA	2 cut(s)	48, 1098
TspRI	CASTG	2 cut(s)	71, 542
Vha464I	CTTAAG	1 cut(s)	1286
VneI	GTGCAC	1 cut(s)	440
VpaK11BI	GGWCC	1 cut(s)	981
XapI	RAATTY	3 cut(s)	205, 902, 1234
XceI	RCATGY	1 cut(s)	859
XhoI	CTCGAG	1 cut(s)	1245
XmnI	GAANNNNTTC	2 cut(s)	394, 921
ZrmI	AGTACT	1 cut(s)	697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.