Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001230

Physical Location & Seq

Genomic Coordinates Reverse (-)

35366578 .. 35371125

Gene Structure 4548 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024385

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGCGATTTCAAGTTTAGGGTTTGCTTGCCGACCCAATTTCAACCTCCGCACTCCCACCTTTCAATGCATTGGCAAGGTTCAATTGAACTTGGTTGCGACCATGGAGGCGATTGATGAGCAAGAGGGTCGTTCTAAGGACAACAAGACCAATGATTCGGCCAGAGATGGGAAGGCACCACAGTGGAAGAAGCTGAATTCGAAAGAGGTTGGGATTAGTAGTTCTATGATTGACAAGGGGCCGACCCGAAAGGTTTTGAATGTGCTAAAGCGAAAGGGTATATACCTTGTACGAGGTTGTGTAAGGGATCTTATCTTAAAACGCACGCCAGAGGACTTTGACATTTTAACTTCAGCTGAATTGAGAGAGGTGACGAGAACATTTTCTTGGTGCCAAGTAGTTGGAAGGCGGTTTCCTATATCTCATGTGCACATTGGTGATACGGTAGTGGAGGTTTCCAGTTTTAGCATCAGTGCACGAAGCTTTGGTAGGAACTCAAGTAGTGATTTTAAAAAACCTGTACGCTGTGATGACAAGGATTTTATGCGTTGGAGCAATTGTTTGAAGCGTGACTTTACAATTAACGGGTTGATGTTTGATCCATATGCAAGGATAGTGTATGACTACTTGGGAGGAATAGAAGATCTTAGAAAAGCTCAAGTCCAAACTGTTGTACCAGCAAGTACTTCATTTCTAGAGGATTGTGCTCGCATTCTACGTGCCATAAGAATTGCTGCTCGTTTAGGATTCCGTATTTCAAAGGAAACAGCTAATTCTATTAAAAATTTATCCTACTCAATTCTTAGGCTTGATAAGGGAAGGATCCTCATGGAAATGAATTATATGATGGTGTATGGTTCTGCTGAAGCTTCCCTTCGATTATTATGGAAATTTGGACTTCTGGAACTACTTCTACCCATCCAGTCCCTTTTTTCTAACTTGGATAAACTTCTTGCACCTGACAAGCCGTGCCACAGTAGCTTATGGATTGCAATCTTAGCATTGCACAAATCACTCTCCAAACTACCTCGAGATGCGTTGGTGGTTGCTGCATTTACCCTTGCTGTTCACAATGGTGGAGATATGTCAGAAGCAGTGGACATAGCCAGGACTATCACTAAACCACATGACGGTAGCTTTCATGAATTATTAGAACTGAAGAGTTTGGACTCTGAAGCATATAATAAAGAGGTTAAGGATCTTGAGGCATCTTTTAGGCTGGCACTCGATCATATGACTGATCAGCAAATTGTCTCAGAGGCCATGGCAGCGTACCCACAAGCACCGTTTTCTGATCTGGTATTTATACCATGGGGATTATCTTTGAGGGTCTCCCAGATTTTCAACTGCGTAAAAGTGGGTGGGAAGCTGGGATTTGTGGCAAAGCAAGGCAGCAAGATTGACTACGAGTCATTAGCTCAGGGCAGCCTGCCAGAGGAAAATGCACTCACTTTTGAGAAAGTCTCCGACTCTCCATTTCTTCTACTACGTAACGGCTTCGTTAAACTTGAACAGCACCACAAATCGAAGCCGCAGAACTCAAATGTCGATGATGATCACATGGAGTTGGAAAGGTGTGCAGCACCAAAATTGTCAGATTCCTTTTCCATGGTGGAAGCAGCTAGCAGCTTTAGCAAAGCATGGAATTTCCTACGGACTCAACCTGCTCAAATTCTTACTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

562

Amino Acids

62.91

Weight (kDa)

8.9

Isoelectric Point (pI)

38.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	94 - 221	4.9e-20	Poly A polymerase head domain
PolyA_pol_RNAbd	PF12627	249 - 308	2.1e-14	Probable RNA and SrmB- binding site of polymerase A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001230)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28090 AT1G28090 AT1G28090 AT1G28090 AT1G28090 AT3G48830 AT5G23690
fragaria_vesca	FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09270
malus_domestica	MD06G1133100.v1.1 MD14G1149300.v1.1 MD14G1149500.v1.1
prunus_persica	Prupe.5G144000_v2.0.a1 Prupe.5G144300_v2.0.a1
pyrus_communis	pycom06g12450 pycom14g12410
rosa_chinensis	RchiOBHm_Chr3g0469071 RchiOBHm_Chr7g0189011
rosa_laevigata	RLG00000004641 RLG00000024375 RLG00000024379 RLG00000024383 RLG00000024385
rosa_multiflora	Rmu_sc0000302.1_g000052 Rmu_sc0000326.1_g000001 Rmu_sc0007139.1_g000009 Rmu_sc0016080.1_g000004
rosa_roxburghii	Rroxscaffold_3G00265860
rosa_rugosa	Rorug03G0099300 Rorug06G0495400 Rorug06G0495500
rosa_samantha	Rh3AG148200 Rh3AG148500 Rh3BG171000 Rh3BG171100 Rh3BG171500 Rh7AG100100 Rh7BG102400 Rh7CG104000 Rh7DG102100
rosa_wichuraiana	Rw0G010940 Rw0G014560 Rw0G014590 Rw7G008650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1672
AccB1I	GGYRCC	2 cut(s)	175, 390
AciI	CCGC	3 cut(s)	49, 409, 1532
AclWI	GGATC	5 cut(s)	315, 593, 817, 830, 1206
AcoI	YGGCCR	1 cut(s)	159
AcsI	RAATTY	5 cut(s)	196, 784, 890, 1645, 1671
AcuI	CTGAAG	4 cut(s)	336, 885, 1178, 1194
AfaI	GTAC	5 cut(s)	291, 522, 675, 685, 1274
AfiI	CCNNNNNNNGG	3 cut(s)	168, 1130, 1435
AhdI	GACNNNNNGTC	1 cut(s)	1408
AjnI	CCWGG	1 cut(s)	1106
AjuI	GAANNNNNNNTTGG	2 cut(s)	370, 402
AleI	CACNNNNGTG	3 cut(s)	181, 435, 1074
AloI	GAACNNNNNNTCC	2 cut(s)	205, 237
Alw21I	GWGCWC	3 cut(s)	432, 478, 709
Alw26I	GTCTC	3 cut(s)	1258, 1336, 1468
Alw44I	GTGCAC	2 cut(s)	428, 474
AlwI	GGATC	5 cut(s)	315, 593, 817, 830, 1206
Ama87I	CYCGRG	1 cut(s)	1029
AoxI	GGCC	3 cut(s)	159, 239, 1260
ApaLI	GTGCAC	2 cut(s)	428, 474
ApeKI	GCWGC	8 cut(s)	734, 1049, 1268, 1392, 1425, 1580, 1619, 1626
ApoI	RAATTY	5 cut(s)	196, 784, 890, 1645, 1671
ArsI	GACNNNNNNTTYG	2 cut(s)	139, 171
Asp700I	GAANNNNTTC	2 cut(s)	382, 909
AspS9I	GGNCC	1 cut(s)	239
AsuHPI	GGTGA	2 cut(s)	382, 449
AsuII	TTCGAA	1 cut(s)	200
AsuNHI	GCTAGC	1 cut(s)	1622
AvaI	CYCGRG	1 cut(s)	1029
BaeGI	GKGCMC	2 cut(s)	432, 478
BaeI	ACNNNNGTAYC	4 cut(s)	432, 465, 657, 690
BamHI	GGATCC	1 cut(s)	822
BanI	GGYRCC	2 cut(s)	175, 390
Bbv12I	GWGCWC	3 cut(s)	432, 478, 709
BbvI	GCAGC	8 cut(s)	721, 1036, 1280, 1404, 1437, 1592, 1631, 1638
BccI	CCATC	3 cut(s)	161, 841, 926
BceAI	ACGGC	2 cut(s)	952, 1510
BcgI	CGANNNNNNTGC	2 cut(s)	110, 144
BciT130I	CCWGG	1 cut(s)	1108
BclI	TGATCA	2 cut(s)	1240, 1555
BcoDI	GTCTC	3 cut(s)	1258, 1336, 1468
BfaI	CTAG	2 cut(s)	695, 1623
BfuAI	ACCTGC	1 cut(s)	1672
BglII	AGATCT	1 cut(s)	643
BisI	GCNGC	9 cut(s)	735, 1050, 1269, 1393, 1426, 1532, 1581, 1620, 1627
BlsI	GCNGC	9 cut(s)	736, 1051, 1270, 1394, 1427, 1533, 1582, 1621, 1628
BmcAI	AGTACT	1 cut(s)	685
Bme1390I	CCNGG	1 cut(s)	1108
BmeRI	GACNNNNNGTC	1 cut(s)	1408
BmeT110I	CYCGRG	1 cut(s)	1029
BmgT120I	GGNCC	1 cut(s)	239
BmiI	GGNNCC	4 cut(s)	177, 240, 392, 824
BmrFI	CCNGG	1 cut(s)	1108
BmsI	GCATC	3 cut(s)	477, 1024, 1217
BmtI	GCTAGC	1 cut(s)	1626
BplI	GAGNNNNNCTC	2 cut(s)	1448, 1480
Bpu10I	CCTNAGC	1 cut(s)	1419
Bpu14I	TTCGAA	1 cut(s)	200
BpuEI	CTTGAG	3 cut(s)	481, 642, 1223
BsaAI	YACGTR	2 cut(s)	719, 1490
BsaBI	GATNNNNATC	2 cut(s)	992, 1554
BsaI	GGTCTC	1 cut(s)	1336
BsaJI	CCNNGG	4 cut(s)	102, 1263, 1310, 1608
BsaXI	ACNNNNNCTCC	2 cut(s)	544, 574
Bsc4I	CCNNNNNNNGG	3 cut(s)	168, 1130, 1435
Bse1I	ACTGG	2 cut(s)	459, 922
Bse3DI	GCAATG	1 cut(s)	1001
Bse8I	GATNNNNATC	2 cut(s)	992, 1554
BseBI	CCWGG	1 cut(s)	1108
BseDI	CCNNGG	4 cut(s)	102, 1263, 1310, 1608
BseGI	GGATG	1 cut(s)	918
BseJI	GATNNNNATC	2 cut(s)	992, 1554
BseLI	CCNNNNNNNGG	3 cut(s)	168, 1130, 1435
BseMI	GCAATG	1 cut(s)	1001
BseMII	CTCAG	2 cut(s)	1269, 1433
BseNI	ACTGG	2 cut(s)	459, 922
BseSI	GKGCMC	2 cut(s)	432, 478
BseXI	GCAGC	8 cut(s)	721, 1036, 1280, 1404, 1437, 1592, 1631, 1638
BseYI	CCCAGC	1 cut(s)	1369
BsgI	GTGCAG	1 cut(s)	1599
BshFI	GGCC	3 cut(s)	161, 241, 1262
BshNI	GGYRCC	2 cut(s)	175, 390
BsiHKAI	GWGCWC	3 cut(s)	432, 478, 709
BsiHKCI	CYCGRG	1 cut(s)	1029
BslFI	GGGAC	1 cut(s)	910
BslI	CCNNNNNNNGG	3 cut(s)	168, 1130, 1435
BsmAI	GTCTC	3 cut(s)	1258, 1336, 1468
BsmFI	GGGAC	1 cut(s)	910
BsmI	GAATGC	1 cut(s)	711
BsnI	GGCC	3 cut(s)	161, 241, 1262
Bso31I	GGTCTC	1 cut(s)	1336
BsoBI	CYCGRG	1 cut(s)	1029
Bsp119I	TTCGAA	1 cut(s)	200
Bsp1286I	GDGCHC	3 cut(s)	432, 478, 709
Bsp143I	GATC	9 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294, 1555
Bsp19I	CCATGG	4 cut(s)	102, 1263, 1310, 1608
BspACI	CCGC	3 cut(s)	49, 409, 1532
BspANI	GGCC	3 cut(s)	161, 241, 1262
BspCNI	CTCAG	2 cut(s)	1268, 1432
BspHI	TCATGA	1 cut(s)	1141
BspLI	GGNNCC	4 cut(s)	177, 240, 392, 824
BspMI	ACCTGC	1 cut(s)	1672
BspOI	GCTAGC	1 cut(s)	1626
BspPI	GGATC	5 cut(s)	315, 593, 817, 830, 1206
BspT104I	TTCGAA	1 cut(s)	200
BspT107I	GGYRCC	2 cut(s)	175, 390
BspTNI	GGTCTC	1 cut(s)	1336
BsrDI	GCAATG	1 cut(s)	1001
BsrI	ACTGG	2 cut(s)	459, 922
BssECI	CCNNGG	4 cut(s)	102, 1263, 1310, 1608
BssMI	GATC	9 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294, 1555
BssT1I	CCWWGG	4 cut(s)	102, 1263, 1310, 1608
Bst2UI	CCWGG	1 cut(s)	1108
Bst4CI	ACNGT	6 cut(s)	183, 445, 670, 977, 1133, 1287
Bst6I	CTCTTC	1 cut(s)	1154
BstBAI	YACGTR	2 cut(s)	719, 1490
BstBI	TTCGAA	1 cut(s)	200
BstC8I	GCNNGC	6 cut(s)	28, 326, 709, 1221, 1430, 1624
BstDEI	CTNAG	6 cut(s)	135, 647, 803, 997, 1255, 1419
BstDSI	CCRYGG	4 cut(s)	102, 1263, 1310, 1608
BstENI	CCTNNNNNAGG	1 cut(s)	1433
BstF5I	GGATG	1 cut(s)	918
BstKTI	GATC	9 cut(s)	310, 601, 646, 825, 1201, 1231, 1243, 1297, 1558
BstMAI	GTCTC	3 cut(s)	1258, 1336, 1468
BstMBI	GATC	9 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294, 1555
BstMWI	GCNNNNNNNGC	4 cut(s)	978, 998, 1268, 1632
BstNI	CCWGG	1 cut(s)	1108
BstSCI	CCNGG	1 cut(s)	1106
BstSLI	GKGCMC	2 cut(s)	432, 478
BstSNI	TACGTA	1 cut(s)	1490
BstV1I	GCAGC	8 cut(s)	721, 1036, 1280, 1404, 1437, 1592, 1631, 1638
BstX2I	RGATCY	4 cut(s)	307, 643, 822, 1198
BstXI	CCANNNNNNTGG	1 cut(s)	401
BstYI	RGATCY	4 cut(s)	307, 643, 822, 1198
BsuRI	GGCC	3 cut(s)	161, 241, 1262
BtgI	CCRYGG	4 cut(s)	102, 1263, 1310, 1608
BtsCI	GGATG	1 cut(s)	918
BtsI	GCAGTG	1 cut(s)	1101
BtsIMutI	CAGTG	3 cut(s)	188, 478, 1101
BveI	ACCTGC	1 cut(s)	1672
Cac8I	GCNNGC	6 cut(s)	28, 326, 709, 1221, 1430, 1624
CciI	TCATGA	1 cut(s)	1141
Cfr13I	GGNCC	1 cut(s)	239
Csp6I	GTAC	5 cut(s)	290, 521, 674, 684, 1273
CviQI	GTAC	5 cut(s)	290, 521, 674, 684, 1273
DdeI	CTNAG	6 cut(s)	135, 647, 803, 997, 1255, 1419
DpnI	GATC	9 cut(s)	309, 600, 645, 824, 1200, 1230, 1242, 1296, 1557
DpnII	GATC	9 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294, 1555
DraI	TTTAAA	1 cut(s)	511
DriI	GACNNNNNGTC	1 cut(s)	1408
EaeI	YGGCCR	1 cut(s)	159
Eam1104I	CTCTTC	1 cut(s)	1154
Eam1105I	GACNNNNNGTC	1 cut(s)	1408
EarI	CTCTTC	1 cut(s)	1154
Eco105I	TACGTA	1 cut(s)	1490
Eco130I	CCWWGG	4 cut(s)	102, 1263, 1310, 1608
Eco31I	GGTCTC	1 cut(s)	1336
Eco57I	CTGAAG	4 cut(s)	336, 885, 1178, 1194
Eco88I	CYCGRG	1 cut(s)	1029
EcoNI	CCTNNNNNAGG	1 cut(s)	1433
EcoRI	GAATTC	1 cut(s)	196
EcoRII	CCWGG	1 cut(s)	1106
EcoT14I	CCWWGG	4 cut(s)	102, 1263, 1310, 1608
EcoT22I	ATGCAT	1 cut(s)	71
ErhI	CCWWGG	4 cut(s)	102, 1263, 1310, 1608
FalI	AAGNNNNNCTT	4 cut(s)	557, 589, 858, 890
FaqI	GGGAC	1 cut(s)	910
FauNDI	CATATG	2 cut(s)	604, 1233
FbaI	TGATCA	2 cut(s)	1240, 1555
Fnu4HI	GCNGC	9 cut(s)	735, 1050, 1269, 1393, 1426, 1532, 1581, 1620, 1627
FokI	GGATG	1 cut(s)	905
Fsp4HI	GCNGC	9 cut(s)	735, 1050, 1269, 1393, 1426, 1532, 1581, 1620, 1627
FspBI	CTAG	2 cut(s)	695, 1623
GluI	GCNGC	9 cut(s)	735, 1050, 1269, 1393, 1426, 1532, 1581, 1620, 1627
GsaI	CCCAGC	1 cut(s)	1373
HaeIII	GGCC	3 cut(s)	161, 241, 1262
HindIII	AAGCTT	2 cut(s)	481, 867
HinfI	GANTC	7 cut(s)	155, 747, 1169, 1409, 1469, 1598, 1657
HphI	GGTGA	2 cut(s)	382, 449
Hpy166II	GTNNAC	4 cut(s)	430, 476, 1069, 1099
Hpy188I	TCNGA	6 cut(s)	1090, 1174, 1258, 1294, 1468, 1597
Hpy188III	TCNNGA	5 cut(s)	695, 902, 1031, 1142, 1202
Hpy8I	GTNNAC	4 cut(s)	430, 476, 1069, 1099
HpyAV	CCTTC	4 cut(s)	166, 399, 813, 884
HpyCH4III	ACNGT	6 cut(s)	183, 445, 670, 977, 1133, 1287
HpyCH4IV	ACGT	2 cut(s)	718, 1489
HpyF10VI	GCNNNNNNNGC	4 cut(s)	978, 998, 1268, 1632
HpyF3I	CTNAG	6 cut(s)	135, 647, 803, 997, 1255, 1419
HpySE526I	ACGT	2 cut(s)	718, 1489
Ksp22I	TGATCA	2 cut(s)	1240, 1555
Kzo9I	GATC	9 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294, 1555
LmnI	GCTCC	1 cut(s)	552
Lsp1109I	GCAGC	8 cut(s)	721, 1036, 1280, 1404, 1437, 1592, 1631, 1638
LweI	GCATC	3 cut(s)	477, 1024, 1217
MaeI	CTAG	2 cut(s)	695, 1623
MaeII	ACGT	2 cut(s)	718, 1489
MaeIII	GTNAC	3 cut(s)	370, 569, 1490
MalI	GATC	9 cut(s)	309, 600, 645, 824, 1200, 1230, 1242, 1296, 1557
MboI	GATC	9 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294, 1555
MboII	GAAGA	4 cut(s)	199, 653, 1171, 1472
MfeI	CAATTG	2 cut(s)	83, 556
MflI	RGATCY	4 cut(s)	307, 643, 822, 1198
MhlI	GDGCHC	3 cut(s)	432, 478, 709
MlyI	GAGTC	4 cut(s)	1163, 1418, 1463, 1651
MmeI	TCCRAC	4 cut(s)	382, 530, 1491, 1548
Mph1103I	ATGCAT	1 cut(s)	71
MroXI	GAANNNNTTC	2 cut(s)	382, 909
MseI	TTAA	7 cut(s)	317, 347, 510, 582, 780, 1194, 1503
MslI	CAYNNNNRTG	4 cut(s)	181, 435, 833, 1074
MspA1I	CMGCKG	1 cut(s)	356
MspR9I	CCNGG	1 cut(s)	1108
MunI	CAATTG	2 cut(s)	83, 556
Mva1269I	GAATGC	1 cut(s)	711
MvaI	CCWGG	1 cut(s)	1108
MwoI	GCNNNNNNNGC	4 cut(s)	978, 998, 1268, 1632
NcoI	CCATGG	4 cut(s)	102, 1263, 1310, 1608
NdeI	CATATG	2 cut(s)	604, 1233
NdeII	GATC	9 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294, 1555
NheI	GCTAGC	1 cut(s)	1622
NlaIV	GGNNCC	4 cut(s)	177, 240, 392, 824
NmuCI	GTSAC	2 cut(s)	370, 569
NsiI	ATGCAT	1 cut(s)	71
NspV	TTCGAA	1 cut(s)	200
OliI	CACNNNNGTG	3 cut(s)	181, 435, 1074
PaeR7I	CTCGAG	1 cut(s)	1029
PagI	TCATGA	1 cut(s)	1141
PcsI	WCGNNNNNNNCGW	1 cut(s)	715
PctI	GAATGC	1 cut(s)	711
PdmI	GAANNNNTTC	2 cut(s)	382, 909
PfeI	GAWTC	3 cut(s)	155, 747, 1598
PkrI	GCNGC	9 cut(s)	736, 1051, 1270, 1394, 1427, 1533, 1582, 1621, 1628
PleI	GAGTC	4 cut(s)	1163, 1417, 1463, 1651
PpsI	GAGTC	4 cut(s)	1163, 1417, 1463, 1651
Ppu21I	YACGTR	2 cut(s)	719, 1490
Psp6I	CCWGG	1 cut(s)	1106
PspFI	CCCAGC	1 cut(s)	1369
PspGI	CCWGG	1 cut(s)	1106
PspN4I	GGNNCC	4 cut(s)	177, 240, 392, 824
PspPI	GGNCC	1 cut(s)	239
PsrI	GAACNNNNNNTAC	2 cut(s)	897, 929
PsuI	RGATCY	4 cut(s)	307, 643, 822, 1198
PvuII	CAGCTG	1 cut(s)	356
RsaI	GTAC	5 cut(s)	291, 522, 675, 685, 1274
RsaNI	GTAC	5 cut(s)	290, 521, 674, 684, 1273
RseI	CAYNNNNRTG	4 cut(s)	181, 435, 833, 1074
SaqAI	TTAA	7 cut(s)	317, 347, 510, 582, 780, 1194, 1503
SatI	GCNGC	9 cut(s)	735, 1050, 1269, 1393, 1426, 1532, 1581, 1620, 1627
Sau3AI	GATC	9 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294, 1555
Sau96I	GGNCC	1 cut(s)	239
ScaI	AGTACT	1 cut(s)	685
SchI	GAGTC	4 cut(s)	1163, 1418, 1463, 1651
ScrFI	CCNGG	1 cut(s)	1108
SduI	GDGCHC	3 cut(s)	432, 478, 709
SfaNI	GCATC	3 cut(s)	477, 1024, 1217
Sfr274I	CTCGAG	1 cut(s)	1029
SfuI	TTCGAA	1 cut(s)	200
SlaI	CTCGAG	1 cut(s)	1029
SmiMI	CAYNNNNRTG	4 cut(s)	181, 435, 833, 1074
SmlI	CTYRAG	4 cut(s)	496, 657, 1029, 1202
SmoI	CTYRAG	4 cut(s)	496, 657, 1029, 1202
SnaBI	TACGTA	1 cut(s)	1490
SsiI	CCGC	3 cut(s)	49, 409, 1532
SspMI	CTAG	2 cut(s)	695, 1623
StyD4I	CCNGG	1 cut(s)	1106
StyI	CCWWGG	4 cut(s)	102, 1263, 1310, 1608
TaaI	ACNGT	6 cut(s)	183, 445, 670, 977, 1133, 1287
TaiI	ACGT	2 cut(s)	721, 1492
TaqI	TCGA	6 cut(s)	200, 877, 1030, 1227, 1526, 1548
TatI	WGTACW	1 cut(s)	683
TauI	GCSGC	1 cut(s)	1534
TfiI	GAWTC	3 cut(s)	155, 747, 1598
Tru1I	TTAA	7 cut(s)	317, 347, 510, 582, 780, 1194, 1503
Tru9I	TTAA	7 cut(s)	317, 347, 510, 582, 780, 1194, 1503
TscAI	CASTG	3 cut(s)	188, 478, 1101
TseFI	GTSAC	2 cut(s)	370, 569
TseI	GCWGC	8 cut(s)	734, 1049, 1268, 1392, 1425, 1580, 1619, 1626
Tsp45I	GTSAC	2 cut(s)	370, 569
TspDTI	ATGAA	4 cut(s)	678, 851, 1130, 1158
TspGWI	ACGGA	2 cut(s)	740, 1669
TspRI	CASTG	3 cut(s)	188, 478, 1101
VneI	GTGCAC	2 cut(s)	428, 474
XagI	CCTNNNNNAGG	1 cut(s)	1433
XapI	RAATTY	5 cut(s)	196, 784, 890, 1645, 1671
XbaI	TCTAGA	1 cut(s)	694
XhoI	CTCGAG	1 cut(s)	1029
XmnI	GAANNNNTTC	2 cut(s)	382, 909
XspI	CTAG	2 cut(s)	695, 1623
ZrmI	AGTACT	1 cut(s)	685
Zsp2I	ATGCAT	1 cut(s)	71

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.