Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001230

Physical Location & Seq

Genomic Coordinates Reverse (-)

35340358 .. 35343474

Gene Structure 3117 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024383

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGCGATTTCAAGTTTGGGGTTTGCTTGCCGACCCAATTTCAACCTCCGCACTCCCACCTTTCAATGCATTGGCAAGGTTCAATTGAACTTGGTTGCGGCCATGGAGGCGATTGCTGAGCAAGAGGGTCGTTCTAAGTACAACAAGACCAATGATTCGGCCAGAGATGGGAAGGCACCACAGTGGAAGAAGCAGAATTCGAAAGAGGTTGGGATTAGTAGTTCTATGATTGACAAGCCGACCCGAAAGGTTTTGAATGTGCTAAAGCGAAAGGGTATATACCTTGTAGGAGGTTGTGTAAGGGATCTTATCTTAAAACGCACGCCAAAGGACTTTGACATTTTAACTTCAGCTGAATTGAGAGAGGTGACGAGAACATTTTCTTGGTGCCTAGTAGTTGGAAGGCGGTTTCCTATATCTCATGTGCACATTGGTGATACGGTAGTGGAGGTTTCCAGTTTTAGCATCAGTGCACGAAGCTTTGGTAGGAACTCAAGTAGTGATTTTAAAAAACCTGTACGCTGTGATGACAAGAATTTTATGCGTTGGAGCAATTGTTTGAAGCGTGACTTTACAATTAACGGGTTGATGTTTGATCCTTATGCAAGGATAGTGTATGACTACTTGGGAGGAATAGAAGATCTTAGAAAAGCTCAAGTCCAAACTGTTGTACCAGCAAGTACTTCATTTCTAGAGGATTGTGCTCGCATTCTACGTGCCATAAGAATTGCTGCTCGTTTAGGATTCCGTATTTCAAAGGAAACAGCTAATTCTATTAAAAATTTATCCTACTCAATTCTTAGGCTTGATAAGGGAAGGATCCTCATGGAAATGAATTATATGATGGTGTATGGTTCTGCTGAAGCTTCCCTTCGATTATTATGGAAATTTGGACTTCTGGAACTACTTCTACCCATCCAGTCCCTTTTTTCTAACTTGGATAAACTTCTTGCACCTGACAAGCCGTGCCACAGTAGCTTATGGATTGCAATCTTAGCATTGCACAAATCACTCTCCAAACAACCTCGAGATGCGTTGGTGGTTGCTGCATTTACCCTTGCTGTTCACAATGGTGGAGATATGTCAGAAGCAGTGGACATAGCCAGGACATTCACTAAACCACATGACGGTAGCTTTCATGAATTATTAGAACTGAAGAGTTTGGACTCTGAAGCATATAATAAAGAGGTTAAGGATCTTGAGGCATCTTTTAGGCTGGCACTCGATCATATGACTGATCAGCAAATTGTCTCAGAGGCCATGGCAGCGTACCCACAAGCACCGTTTTCTGATCTGGTATTTATACCATGGGGATTATCTTTGAGGGTCTCCCAGATTTTCAACTGCGTAAAAGTGGGTGGGAAGCTGGGATTTGTGGCAAAGCAAGGCAGCAAGATTGACTATGAGTCATTAGCTCAGGGCAGCCTGCCAGGGGTTCGGCATATTTTTGCAAGAGTCGTGTTTGATACCATCTATCCTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

495

Amino Acids

55.34

Weight (kDa)

9.41

Isoelectric Point (pI)

39.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	93 - 220	2.2e-22	Poly A polymerase head domain
PolyA_pol_RNAbd	PF12627	248 - 307	1.7e-14	Probable RNA and SrmB- binding site of polymerase A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001230)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28090 AT1G28090 AT1G28090 AT1G28090 AT1G28090 AT3G48830 AT5G23690
fragaria_vesca	FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09270
malus_domestica	MD06G1133100.v1.1 MD14G1149300.v1.1 MD14G1149500.v1.1
prunus_persica	Prupe.5G144000_v2.0.a1 Prupe.5G144300_v2.0.a1
pyrus_communis	pycom06g12450 pycom14g12410
rosa_chinensis	RchiOBHm_Chr3g0469071 RchiOBHm_Chr7g0189011
rosa_laevigata	RLG00000004641 RLG00000024375 RLG00000024379 RLG00000024383 RLG00000024385
rosa_multiflora	Rmu_sc0000302.1_g000052 Rmu_sc0000326.1_g000001 Rmu_sc0007139.1_g000009 Rmu_sc0016080.1_g000004
rosa_roxburghii	Rroxscaffold_3G00265860
rosa_rugosa	Rorug03G0099300 Rorug06G0495400 Rorug06G0495500
rosa_samantha	Rh3AG148200 Rh3AG148500 Rh3BG171000 Rh3BG171100 Rh3BG171500 Rh7AG100100 Rh7BG102400 Rh7CG104000 Rh7DG102100
rosa_wichuraiana	Rw0G010940 Rw0G014560 Rw0G014590 Rw7G008650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	175, 387
AciI	CCGC	3 cut(s)	49, 98, 406
AclWI	GGATC	5 cut(s)	312, 590, 814, 827, 1203
AcoI	YGGCCR	2 cut(s)	99, 159
AcsI	RAATTY	4 cut(s)	196, 535, 781, 887
AcuI	CTGAAG	4 cut(s)	333, 882, 1175, 1191
AfaI	GTAC	5 cut(s)	140, 519, 672, 682, 1271
AfiI	CCNNNNNNNGG	3 cut(s)	168, 1127, 1432
AgsI	TTSAA	9 cut(s)	12, 43, 65, 83, 88, 256, 562, 756, 1342
AhdI	GACNNNNNGTC	1 cut(s)	1405
AjnI	CCWGG	2 cut(s)	1103, 1429
AjuI	GAANNNNNNNTTGG	2 cut(s)	367, 399
AleI	CACNNNNGTG	3 cut(s)	181, 432, 1071
AloI	GAACNNNNNNTCC	2 cut(s)	205, 237
AluBI	AGCT	9 cut(s)	353, 480, 653, 767, 866, 978, 1134, 1366, 1415
AluI	AGCT	9 cut(s)	353, 480, 653, 767, 866, 978, 1134, 1366, 1415
Alw21I	GWGCWC	3 cut(s)	429, 475, 706
Alw26I	GTCTC	2 cut(s)	1255, 1333
Alw44I	GTGCAC	2 cut(s)	425, 471
AlwI	GGATC	5 cut(s)	312, 590, 814, 827, 1203
Ama87I	CYCGRG	1 cut(s)	1026
AoxI	GGCC	3 cut(s)	99, 159, 1257
ApaLI	GTGCAC	2 cut(s)	425, 471
ApeKI	GCWGC	5 cut(s)	731, 1046, 1265, 1389, 1422
ApoI	RAATTY	4 cut(s)	196, 535, 781, 887
ArsI	GACNNNNNNTTYG	2 cut(s)	139, 171
Asp700I	GAANNNNTTC	2 cut(s)	379, 906
AsuHPI	GGTGA	2 cut(s)	379, 446
AsuII	TTCGAA	1 cut(s)	200
AvaI	CYCGRG	1 cut(s)	1026
BaeGI	GKGCMC	2 cut(s)	429, 475
BaeI	ACNNNNGTAYC	4 cut(s)	429, 462, 654, 687
BamHI	GGATCC	1 cut(s)	819
BanI	GGYRCC	2 cut(s)	175, 387
Bbv12I	GWGCWC	3 cut(s)	429, 475, 706
BbvI	GCAGC	5 cut(s)	718, 1033, 1277, 1401, 1434
BccI	CCATC	4 cut(s)	161, 838, 923, 1478
BceAI	ACGGC	1 cut(s)	949
BcgI	CGANNNNNNTGC	2 cut(s)	110, 144
BciT130I	CCWGG	2 cut(s)	1105, 1431
BclI	TGATCA	1 cut(s)	1237
BcoDI	GTCTC	2 cut(s)	1255, 1333
BfaI	CTAG	2 cut(s)	392, 692
BglI	GCCNNNNNGGC	1 cut(s)	107
BglII	AGATCT	1 cut(s)	640
BisI	GCNGC	6 cut(s)	99, 732, 1047, 1266, 1390, 1423
BlpI	GCTNAGC	1 cut(s)	117
BlsI	GCNGC	6 cut(s)	100, 733, 1048, 1267, 1391, 1424
BmcAI	AGTACT	1 cut(s)	682
Bme1390I	CCNGG	2 cut(s)	1105, 1431
BmeRI	GACNNNNNGTC	1 cut(s)	1405
BmeT110I	CYCGRG	1 cut(s)	1026
BmiI	GGNNCC	3 cut(s)	177, 389, 821
BmrFI	CCNGG	2 cut(s)	1105, 1431
BmsI	GCATC	3 cut(s)	474, 1021, 1214
Bpu10I	CCTNAGC	1 cut(s)	1416
Bpu1102I	GCTNAGC	1 cut(s)	117
Bpu14I	TTCGAA	1 cut(s)	200
BpuEI	CTTGAG	3 cut(s)	478, 639, 1220
BsaAI	YACGTR	1 cut(s)	716
BsaBI	GATNNNNATC	1 cut(s)	989
BsaI	GGTCTC	1 cut(s)	1333
BsaJI	CCNNGG	4 cut(s)	102, 1260, 1307, 1430
BsaXI	ACNNNNNCTCC	4 cut(s)	282, 312, 541, 571
Bsc4I	CCNNNNNNNGG	3 cut(s)	168, 1127, 1432
Bse1I	ACTGG	2 cut(s)	456, 919
Bse3DI	GCAATG	1 cut(s)	998
Bse8I	GATNNNNATC	1 cut(s)	989
BseBI	CCWGG	2 cut(s)	1105, 1431
BseDI	CCNNGG	4 cut(s)	102, 1260, 1307, 1430
BseGI	GGATG	1 cut(s)	915
BseJI	GATNNNNATC	1 cut(s)	989
BseLI	CCNNNNNNNGG	3 cut(s)	168, 1127, 1432
BseMI	GCAATG	1 cut(s)	998
BseMII	CTCAG	3 cut(s)	108, 1266, 1430
BseNI	ACTGG	2 cut(s)	456, 919
BseSI	GKGCMC	2 cut(s)	429, 475
BseXI	GCAGC	5 cut(s)	718, 1033, 1277, 1401, 1434
BseYI	CCCAGC	1 cut(s)	1366
BshFI	GGCC	3 cut(s)	101, 161, 1259
BshNI	GGYRCC	2 cut(s)	175, 387
BsiHKAI	GWGCWC	3 cut(s)	429, 475, 706
BsiHKCI	CYCGRG	1 cut(s)	1026
BslFI	GGGAC	1 cut(s)	907
BslI	CCNNNNNNNGG	3 cut(s)	168, 1127, 1432
BsmAI	GTCTC	2 cut(s)	1255, 1333
BsmFI	GGGAC	1 cut(s)	907
BsmI	GAATGC	1 cut(s)	708
BsnI	GGCC	3 cut(s)	101, 161, 1259
Bso31I	GGTCTC	1 cut(s)	1333
BsoBI	CYCGRG	1 cut(s)	1026
Bsp119I	TTCGAA	1 cut(s)	200
Bsp1286I	GDGCHC	3 cut(s)	429, 475, 706
Bsp143I	GATC	8 cut(s)	304, 595, 640, 819, 1195, 1225, 1237, 1291
Bsp1720I	GCTNAGC	1 cut(s)	117
Bsp19I	CCATGG	3 cut(s)	102, 1260, 1307
BspACI	CCGC	3 cut(s)	49, 98, 406
BspANI	GGCC	3 cut(s)	101, 161, 1259
BspCNI	CTCAG	3 cut(s)	109, 1265, 1429
BspHI	TCATGA	1 cut(s)	1138
BspLI	GGNNCC	3 cut(s)	177, 389, 821
BspPI	GGATC	5 cut(s)	312, 590, 814, 827, 1203
BspT104I	TTCGAA	1 cut(s)	200
BspT107I	GGYRCC	2 cut(s)	175, 387
BspTNI	GGTCTC	1 cut(s)	1333
BsrDI	GCAATG	1 cut(s)	998
BsrI	ACTGG	2 cut(s)	456, 919
BssECI	CCNNGG	4 cut(s)	102, 1260, 1307, 1430
BssMI	GATC	8 cut(s)	304, 595, 640, 819, 1195, 1225, 1237, 1291
BssT1I	CCWWGG	3 cut(s)	102, 1260, 1307
Bst2UI	CCWGG	2 cut(s)	1105, 1431
Bst4CI	ACNGT	6 cut(s)	183, 442, 667, 974, 1130, 1284
Bst6I	CTCTTC	1 cut(s)	1151
BstBAI	YACGTR	1 cut(s)	716
BstBI	TTCGAA	1 cut(s)	200
BstC8I	GCNNGC	5 cut(s)	28, 323, 706, 1218, 1427
BstDEI	CTNAG	7 cut(s)	117, 135, 644, 800, 994, 1252, 1416
BstDSI	CCRYGG	3 cut(s)	102, 1260, 1307
BstF5I	GGATG	1 cut(s)	915
BstKTI	GATC	8 cut(s)	307, 598, 643, 822, 1198, 1228, 1240, 1294
BstMAI	GTCTC	2 cut(s)	1255, 1333
BstMBI	GATC	8 cut(s)	304, 595, 640, 819, 1195, 1225, 1237, 1291
BstMWI	GCNNNNNNNGC	4 cut(s)	107, 975, 995, 1265
BstNI	CCWGG	2 cut(s)	1105, 1431
BstSCI	CCNGG	2 cut(s)	1103, 1429
BstSLI	GKGCMC	2 cut(s)	429, 475
BstV1I	GCAGC	5 cut(s)	718, 1033, 1277, 1401, 1434
BstX2I	RGATCY	4 cut(s)	304, 640, 819, 1195
BstYI	RGATCY	4 cut(s)	304, 640, 819, 1195
BsuRI	GGCC	3 cut(s)	101, 161, 1259
BtgI	CCRYGG	3 cut(s)	102, 1260, 1307
BtsCI	GGATG	1 cut(s)	915
BtsI	GCAGTG	1 cut(s)	1098
BtsIMutI	CAGTG	3 cut(s)	188, 475, 1098
Cac8I	GCNNGC	5 cut(s)	28, 323, 706, 1218, 1427
CciI	TCATGA	1 cut(s)	1138
Csp6I	GTAC	5 cut(s)	139, 518, 671, 681, 1270
CviAII	CATG	7 cut(s)	103, 422, 826, 1124, 1139, 1261, 1308
CviQI	GTAC	5 cut(s)	139, 518, 671, 681, 1270
DdeI	CTNAG	7 cut(s)	117, 135, 644, 800, 994, 1252, 1416
DpnI	GATC	8 cut(s)	306, 597, 642, 821, 1197, 1227, 1239, 1293
DpnII	GATC	8 cut(s)	304, 595, 640, 819, 1195, 1225, 1237, 1291
DraI	TTTAAA	1 cut(s)	508
DriI	GACNNNNNGTC	1 cut(s)	1405
EaeI	YGGCCR	2 cut(s)	99, 159
Eam1104I	CTCTTC	1 cut(s)	1151
Eam1105I	GACNNNNNGTC	1 cut(s)	1405
EarI	CTCTTC	1 cut(s)	1151
Eco130I	CCWWGG	3 cut(s)	102, 1260, 1307
Eco31I	GGTCTC	1 cut(s)	1333
Eco57I	CTGAAG	4 cut(s)	333, 882, 1175, 1191
Eco88I	CYCGRG	1 cut(s)	1026
EcoRI	GAATTC	1 cut(s)	196
EcoRII	CCWGG	2 cut(s)	1103, 1429
EcoT14I	CCWWGG	3 cut(s)	102, 1260, 1307
EcoT22I	ATGCAT	1 cut(s)	71
ErhI	CCWWGG	3 cut(s)	102, 1260, 1307
FaeI	CATG	7 cut(s)	106, 425, 829, 1127, 1142, 1264, 1311
FalI	AAGNNNNNCTT	4 cut(s)	554, 586, 855, 887
FaqI	GGGAC	1 cut(s)	907
FatI	CATG	7 cut(s)	102, 421, 825, 1123, 1138, 1260, 1307
FauNDI	CATATG	1 cut(s)	1230
FbaI	TGATCA	1 cut(s)	1237
Fnu4HI	GCNGC	6 cut(s)	99, 732, 1047, 1266, 1390, 1423
FokI	GGATG	1 cut(s)	902
Fsp4HI	GCNGC	6 cut(s)	99, 732, 1047, 1266, 1390, 1423
FspBI	CTAG	2 cut(s)	392, 692
GluI	GCNGC	6 cut(s)	99, 732, 1047, 1266, 1390, 1423
GsaI	CCCAGC	1 cut(s)	1370
HaeIII	GGCC	3 cut(s)	101, 161, 1259
Hin1II	CATG	7 cut(s)	106, 425, 829, 1127, 1142, 1264, 1311
HindIII	AAGCTT	2 cut(s)	478, 864
HinfI	GANTC	5 cut(s)	155, 744, 1166, 1406, 1455
HphI	GGTGA	2 cut(s)	379, 446
Hpy166II	GTNNAC	4 cut(s)	427, 473, 1066, 1096
Hpy188I	TCNGA	4 cut(s)	1087, 1171, 1255, 1291
Hpy188III	TCNNGA	5 cut(s)	692, 899, 1028, 1139, 1199
Hpy8I	GTNNAC	4 cut(s)	427, 473, 1066, 1096
HpyAV	CCTTC	4 cut(s)	166, 396, 810, 881
HpyCH4III	ACNGT	6 cut(s)	183, 442, 667, 974, 1130, 1284
HpyCH4IV	ACGT	1 cut(s)	715
HpyCH4V	TGCA	9 cut(s)	69, 427, 473, 605, 953, 989, 1003, 1049, 1451
HpyF10VI	GCNNNNNNNGC	4 cut(s)	107, 975, 995, 1265
HpyF3I	CTNAG	7 cut(s)	117, 135, 644, 800, 994, 1252, 1416
HpySE526I	ACGT	1 cut(s)	715
Hsp92II	CATG	7 cut(s)	106, 425, 829, 1127, 1142, 1264, 1311
Ksp22I	TGATCA	1 cut(s)	1237
Kzo9I	GATC	8 cut(s)	304, 595, 640, 819, 1195, 1225, 1237, 1291
LmnI	GCTCC	1 cut(s)	549
Lsp1109I	GCAGC	5 cut(s)	718, 1033, 1277, 1401, 1434
LweI	GCATC	3 cut(s)	474, 1021, 1214
MaeI	CTAG	2 cut(s)	392, 692
MaeII	ACGT	1 cut(s)	715
MaeIII	GTNAC	2 cut(s)	367, 566
MalI	GATC	8 cut(s)	306, 597, 642, 821, 1197, 1227, 1239, 1293
MboI	GATC	8 cut(s)	304, 595, 640, 819, 1195, 1225, 1237, 1291
MboII	GAAGA	3 cut(s)	199, 650, 1168
MfeI	CAATTG	2 cut(s)	83, 553
MflI	RGATCY	4 cut(s)	304, 640, 819, 1195
MhlI	GDGCHC	3 cut(s)	429, 475, 706
MlyI	GAGTC	3 cut(s)	1160, 1415, 1464
MmeI	TCCRAC	2 cut(s)	379, 527
Mph1103I	ATGCAT	1 cut(s)	71
MroXI	GAANNNNTTC	2 cut(s)	379, 906
MseI	TTAA	6 cut(s)	314, 344, 507, 579, 777, 1191
MslI	CAYNNNNRTG	4 cut(s)	181, 432, 830, 1071
MspA1I	CMGCKG	1 cut(s)	353
MspR9I	CCNGG	2 cut(s)	1105, 1431
MunI	CAATTG	2 cut(s)	83, 553
Mva1269I	GAATGC	1 cut(s)	708
MvaI	CCWGG	2 cut(s)	1105, 1431
MwoI	GCNNNNNNNGC	4 cut(s)	107, 975, 995, 1265
NcoI	CCATGG	3 cut(s)	102, 1260, 1307
NdeI	CATATG	1 cut(s)	1230
NdeII	GATC	8 cut(s)	304, 595, 640, 819, 1195, 1225, 1237, 1291
NlaIII	CATG	7 cut(s)	106, 425, 829, 1127, 1142, 1264, 1311
NlaIV	GGNNCC	3 cut(s)	177, 389, 821
NmuCI	GTSAC	2 cut(s)	367, 566
NsiI	ATGCAT	1 cut(s)	71
NspV	TTCGAA	1 cut(s)	200
OliI	CACNNNNGTG	3 cut(s)	181, 432, 1071
PaeR7I	CTCGAG	1 cut(s)	1026
PagI	TCATGA	1 cut(s)	1138
PcsI	WCGNNNNNNNCGW	1 cut(s)	712
PctI	GAATGC	1 cut(s)	708
PdmI	GAANNNNTTC	2 cut(s)	379, 906
PfeI	GAWTC	2 cut(s)	155, 744
PkrI	GCNGC	6 cut(s)	100, 733, 1048, 1267, 1391, 1424
PleI	GAGTC	3 cut(s)	1160, 1414, 1463
PpsI	GAGTC	3 cut(s)	1160, 1414, 1463
Ppu21I	YACGTR	1 cut(s)	716
Psp6I	CCWGG	2 cut(s)	1103, 1429
PspFI	CCCAGC	1 cut(s)	1366
PspGI	CCWGG	2 cut(s)	1103, 1429
PspN4I	GGNNCC	3 cut(s)	177, 389, 821
PsrI	GAACNNNNNNTAC	2 cut(s)	894, 926
PsuI	RGATCY	4 cut(s)	304, 640, 819, 1195
PvuII	CAGCTG	1 cut(s)	353
RsaI	GTAC	5 cut(s)	140, 519, 672, 682, 1271
RsaNI	GTAC	5 cut(s)	139, 518, 671, 681, 1270
RseI	CAYNNNNRTG	4 cut(s)	181, 432, 830, 1071
SaqAI	TTAA	6 cut(s)	314, 344, 507, 579, 777, 1191
SatI	GCNGC	6 cut(s)	99, 732, 1047, 1266, 1390, 1423
Sau3AI	GATC	8 cut(s)	304, 595, 640, 819, 1195, 1225, 1237, 1291
ScaI	AGTACT	1 cut(s)	682
SchI	GAGTC	3 cut(s)	1160, 1415, 1464
ScrFI	CCNGG	2 cut(s)	1105, 1431
SduI	GDGCHC	3 cut(s)	429, 475, 706
SfaNI	GCATC	3 cut(s)	474, 1021, 1214
Sfr274I	CTCGAG	1 cut(s)	1026
SfuI	TTCGAA	1 cut(s)	200
SlaI	CTCGAG	1 cut(s)	1026
SmiMI	CAYNNNNRTG	4 cut(s)	181, 432, 830, 1071
SmlI	CTYRAG	4 cut(s)	493, 654, 1026, 1199
SmoI	CTYRAG	4 cut(s)	493, 654, 1026, 1199
SsiI	CCGC	3 cut(s)	49, 98, 406
SspMI	CTAG	2 cut(s)	392, 692
StyD4I	CCNGG	2 cut(s)	1103, 1429
StyI	CCWWGG	3 cut(s)	102, 1260, 1307
TaaI	ACNGT	6 cut(s)	183, 442, 667, 974, 1130, 1284
TaiI	ACGT	1 cut(s)	718
TaqI	TCGA	4 cut(s)	200, 874, 1027, 1224
TatI	WGTACW	2 cut(s)	138, 680
TauI	GCSGC	1 cut(s)	101
TfiI	GAWTC	2 cut(s)	155, 744
Tru1I	TTAA	6 cut(s)	314, 344, 507, 579, 777, 1191
Tru9I	TTAA	6 cut(s)	314, 344, 507, 579, 777, 1191
TscAI	CASTG	3 cut(s)	188, 475, 1098
TseFI	GTSAC	2 cut(s)	367, 566
TseI	GCWGC	5 cut(s)	731, 1046, 1265, 1389, 1422
Tsp45I	GTSAC	2 cut(s)	367, 566
TspDTI	ATGAA	4 cut(s)	675, 848, 1127, 1155
TspGWI	ACGGA	1 cut(s)	737
TspRI	CASTG	3 cut(s)	188, 475, 1098
VneI	GTGCAC	2 cut(s)	425, 471
XapI	RAATTY	4 cut(s)	196, 535, 781, 887
XbaI	TCTAGA	1 cut(s)	691
XhoI	CTCGAG	1 cut(s)	1026
XmnI	GAANNNNTTC	2 cut(s)	379, 906
XspI	CTAG	2 cut(s)	392, 692
ZrmI	AGTACT	1 cut(s)	682
Zsp2I	ATGCAT	1 cut(s)	71

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.