Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00652

Orthogroup ID

OG0001230

Physical Location & Seq

Genomic Coordinates Reverse (-)

13841 .. 18201

Gene Structure 4361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G014560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGCCAGACTTCAATCGGTTTCATGCATGAAGTTTCCAGATATTGTCTTCTTTAAACTCAAAGAAATGAACGTTATTCCATCACCTTCTAGACAAAGCCGGTATAGTTTACATTTTGATTTGCAGTCGAATGGGAAGGCACCACAGTGGAAGAAGCTGAATTCGAAAGAGGTTGGGATTAGTAGTTCTATGATTGACAAGCCGACCCGAAAGGTTTTGAATGTGCTAGAGCGAAAGGGTATATACCTTGTAGGAGGTTGTGTAAGGGATCTTATCTTAAAACGCACGCCAAAGGACTTTGACATTTTAACTTCAGCTGAATTGAGAGAGGTGACGAGAACATTTTCTTGGTGCCAAGTAGTTGGAAGGCGGTTTCCTATATCTCATGTGCACATTGGTGATACGGTAGTGGAGGTTTCCAGTTTTAGCATCAGTGCACGAAGCTTTGGTAGGAACTCAAGTAGTGATTTTAAAAAACCTGTACGCTGTGATGACAAGGATTTTATGCGTTGGAGCAATTGTTTGAAGCGTGACTTTACAATTAACGGGTTGATGTTTGATCCTTATGCAAGGATAGTGTATGACTACTTGGGAGGAATAGAAGATCTTAGAAAAGCTAAAGTCCAAACTGTTGTACCAGCAAGTACTTCATTTCGAGAGGATTGTGCTCGCATTCTACGTGCCATAAGAATTGCTGCTCGTTTAGGATTCCGTATTTCAAAGGAAACAGCTAATTCTATTAAAAATTTATCCTACTCAATTCTTAGGCTTGATAAGGGAAGGATCCTCATGGAAATGAATTATTTGATGGCGTATGGTTCTGCTGAAGCTTCCCTTCGATTATTATGGAAATTTGGACTTCTGGAACTACTTCTACCCATCCAGGTATACAAAAGGTCTAACATGCTTTTGTCCCTTTTTTCTAACTTGGATAAACTTCTTGCACCGGACAAGCCGTGCCACAGTAGCTTATGGATTGCAATCTTAGCATTGCATAAAGCACTCTCCGAACAACCTCGAGATGCGTTGGTGGTTGCTGCATTTACCCTTGCTGTTCACAATGGTGGAGATATGTCAGAAGCAGTGGACATAGCCAGGACTATCACTAAACCACATGACGGTAGCTTTCATGAATTATTAGAACCGAAGAGTTTGGACTCTGAAGCATGTAATAAAGAGGTTAAGGATCTTGAGGCATCTTTTAGGCTGGCACTCGATCATATGACTGATCAGCAAATTGTTTCAGAGGCCATGGCAGCATACCCACAAGCACCGTTTTCTGATCTGGTATTTATACCATGGGGATTATCTTTGAGGGTCTCCCAGATTTTCAACTGCGTAAAAGTGGGTGGGAAGCTGGGATTTGTGGCAAAGCAAGGCAGCAAGATTGACTACGAGTCATTAGCTCAGGGCAGCCTGCCAGAGGTTCGGCATATTTTTGCAAGAGTCGTGTTTGATACCGTCTATCCTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

491

Amino Acids

55.37

Weight (kDa)

9.36

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	81 - 208	2.4e-22	Poly A polymerase head domain
PolyA_pol_RNAbd	PF12627	236 - 295	1.3e-14	Probable RNA and SrmB- binding site of polymerase A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001230)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28090 AT1G28090 AT1G28090 AT1G28090 AT1G28090 AT3G48830 AT5G23690
fragaria_vesca	FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09150 FvH4_5g09270
malus_domestica	MD06G1133100.v1.1 MD14G1149300.v1.1 MD14G1149500.v1.1
prunus_persica	Prupe.5G144000_v2.0.a1 Prupe.5G144300_v2.0.a1
pyrus_communis	pycom06g12450 pycom14g12410
rosa_chinensis	RchiOBHm_Chr3g0469071 RchiOBHm_Chr7g0189011
rosa_laevigata	RLG00000004641 RLG00000024375 RLG00000024379 RLG00000024383 RLG00000024385
rosa_multiflora	Rmu_sc0000302.1_g000052 Rmu_sc0000326.1_g000001 Rmu_sc0007139.1_g000009 Rmu_sc0016080.1_g000004
rosa_roxburghii	Rroxscaffold_3G00265860
rosa_rugosa	Rorug03G0099300 Rorug06G0495400 Rorug06G0495500
rosa_samantha	Rh3AG148200 Rh3AG148500 Rh3BG171000 Rh3BG171100 Rh3BG171500 Rh7AG100100 Rh7BG102400 Rh7CG104000 Rh7DG102100
rosa_wichuraiana	Rw0G010940 Rw0G014560 Rw0G014590 Rw7G008650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	139, 351
AccI	GTMKAC	1 cut(s)	888
AciI	CCGC	1 cut(s)	370
AclI	AACGTT	1 cut(s)	72
AclWI	GGATC	5 cut(s)	276, 554, 778, 791, 1194
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	160, 745, 851
AcuI	CTGAAG	3 cut(s)	297, 846, 1182
AfaI	GTAC	3 cut(s)	483, 636, 646
AfiI	CCNNNNNNNGG	2 cut(s)	1118, 1423
AgsI	TTSAA	5 cut(s)	14, 220, 526, 720, 1333
AhdI	GACNNNNNGTC	1 cut(s)	1396
AjnI	CCWGG	2 cut(s)	882, 1094
AjuI	GAANNNNNNNTTGG	2 cut(s)	331, 363
AleI	CACNNNNGTG	3 cut(s)	145, 396, 1062
AloI	GAACNNNNNNTCC	2 cut(s)	169, 201
Alw21I	GWGCWC	3 cut(s)	393, 439, 670
Alw26I	GTCTC	1 cut(s)	1324
Alw44I	GTGCAC	2 cut(s)	389, 435
AlwI	GGATC	5 cut(s)	276, 554, 778, 791, 1194
Ama87I	CYCGRG	1 cut(s)	1017
AoxI	GGCC	2 cut(s)	3, 1248
ApaLI	GTGCAC	2 cut(s)	389, 435
ApeKI	GCWGC	5 cut(s)	695, 1037, 1256, 1380, 1413
ApoI	RAATTY	3 cut(s)	160, 745, 851
Asp700I	GAANNNNTTC	2 cut(s)	343, 870
AsuHPI	GGTGA	3 cut(s)	75, 343, 410
AsuII	TTCGAA	1 cut(s)	164
AvaI	CYCGRG	1 cut(s)	1017
BaeGI	GKGCMC	2 cut(s)	393, 439
BaeI	ACNNNNGTAYC	4 cut(s)	393, 426, 618, 651
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	783
BanI	GGYRCC	2 cut(s)	139, 351
BbsI	GAAGAC	1 cut(s)	40
Bbv12I	GWGCWC	3 cut(s)	393, 439, 670
BbvI	GCAGC	5 cut(s)	682, 1024, 1268, 1392, 1425
BccI	CCATC	3 cut(s)	88, 802, 887
BceAI	ACGGC	1 cut(s)	940
BciT130I	CCWGG	2 cut(s)	884, 1096
BclI	TGATCA	1 cut(s)	1228
BcoDI	GTCTC	1 cut(s)	1324
BfaI	CTAG	2 cut(s)	90, 227
BglII	AGATCT	1 cut(s)	604
BisI	GCNGC	5 cut(s)	696, 1038, 1257, 1381, 1414
BlsI	GCNGC	5 cut(s)	697, 1039, 1258, 1382, 1415
BmcAI	AGTACT	1 cut(s)	646
Bme1390I	CCNGG	2 cut(s)	884, 1096
BmeRI	GACNNNNNGTC	1 cut(s)	1396
BmeT110I	CYCGRG	1 cut(s)	1017
BmiI	GGNNCC	3 cut(s)	141, 353, 785
BmrFI	CCNGG	2 cut(s)	884, 1096
BmsI	GCATC	3 cut(s)	438, 1012, 1205
BpiI	GAAGAC	1 cut(s)	40
Bpu10I	CCTNAGC	1 cut(s)	1407
Bpu14I	TTCGAA	1 cut(s)	164
BpuEI	CTTGAG	2 cut(s)	442, 1211
BsaAI	YACGTR	1 cut(s)	680
BsaBI	GATNNNNATC	1 cut(s)	980
BsaI	GGTCTC	1 cut(s)	1324
BsaJI	CCNNGG	2 cut(s)	1251, 1298
BsaWI	WCCGGW	1 cut(s)	946
BsaXI	ACNNNNNCTCC	4 cut(s)	246, 276, 505, 535
Bsc4I	CCNNNNNNNGG	2 cut(s)	1118, 1423
Bse118I	RCCGGY	1 cut(s)	99
Bse1I	ACTGG	1 cut(s)	420
Bse3DI	GCAATG	1 cut(s)	989
Bse8I	GATNNNNATC	1 cut(s)	980
BseBI	CCWGG	2 cut(s)	884, 1096
BseDI	CCNNGG	2 cut(s)	1251, 1298
BseGI	GGATG	1 cut(s)	879
BseJI	GATNNNNATC	1 cut(s)	980
BseLI	CCNNNNNNNGG	2 cut(s)	1118, 1423
BseMI	GCAATG	1 cut(s)	989
BseMII	CTCAG	1 cut(s)	1421
BseNI	ACTGG	1 cut(s)	420
BseSI	GKGCMC	2 cut(s)	393, 439
BseXI	GCAGC	5 cut(s)	682, 1024, 1268, 1392, 1425
BseYI	CCCAGC	1 cut(s)	1357
BshFI	GGCC	2 cut(s)	5, 1250
BshNI	GGYRCC	2 cut(s)	139, 351
BsiHKAI	GWGCWC	3 cut(s)	393, 439, 670
BsiHKCI	CYCGRG	1 cut(s)	1017
BsiSI	CCGG	2 cut(s)	100, 947
BslFI	GGGAC	1 cut(s)	898
BslI	CCNNNNNNNGG	2 cut(s)	1118, 1423
BsmAI	GTCTC	1 cut(s)	1324
BsmFI	GGGAC	1 cut(s)	898
BsmI	GAATGC	1 cut(s)	672
BsnI	GGCC	2 cut(s)	5, 1250
Bso31I	GGTCTC	1 cut(s)	1324
BsoBI	CYCGRG	1 cut(s)	1017
Bsp119I	TTCGAA	1 cut(s)	164
Bsp1286I	GDGCHC	3 cut(s)	393, 439, 670
Bsp143I	GATC	8 cut(s)	268, 559, 604, 783, 1186, 1216, 1228, 1282
Bsp19I	CCATGG	2 cut(s)	1251, 1298
BspACI	CCGC	1 cut(s)	370
BspANI	GGCC	2 cut(s)	5, 1250
BspCNI	CTCAG	1 cut(s)	1420
BspHI	TCATGA	1 cut(s)	1129
BspLI	GGNNCC	3 cut(s)	141, 353, 785
BspPI	GGATC	5 cut(s)	276, 554, 778, 791, 1194
BspT104I	TTCGAA	1 cut(s)	164
BspT107I	GGYRCC	2 cut(s)	139, 351
BspTNI	GGTCTC	1 cut(s)	1324
BsrDI	GCAATG	1 cut(s)	989
BsrFI	RCCGGY	1 cut(s)	99
BsrI	ACTGG	1 cut(s)	420
BssAI	RCCGGY	1 cut(s)	99
BssECI	CCNNGG	2 cut(s)	1251, 1298
BssMI	GATC	8 cut(s)	268, 559, 604, 783, 1186, 1216, 1228, 1282
BssNAI	GTATAC	1 cut(s)	889
BssT1I	CCWWGG	2 cut(s)	1251, 1298
Bst1107I	GTATAC	1 cut(s)	889
Bst2UI	CCWGG	2 cut(s)	884, 1096
Bst4CI	ACNGT	7 cut(s)	147, 406, 631, 965, 1121, 1275, 1462
Bst6I	CTCTTC	1 cut(s)	1142
BstBAI	YACGTR	1 cut(s)	680
BstBI	TTCGAA	1 cut(s)	164
BstC8I	GCNNGC	4 cut(s)	287, 670, 1209, 1418
BstDEI	CTNAG	4 cut(s)	608, 764, 985, 1407
BstDSI	CCRYGG	2 cut(s)	1251, 1298
BstENI	CCTNNNNNAGG	1 cut(s)	1421
BstF5I	GGATG	1 cut(s)	879
BstKTI	GATC	8 cut(s)	271, 562, 607, 786, 1189, 1219, 1231, 1285
BstMAI	GTCTC	1 cut(s)	1324
BstMBI	GATC	8 cut(s)	268, 559, 604, 783, 1186, 1216, 1228, 1282
BstMWI	GCNNNNNNNGC	3 cut(s)	966, 986, 1256
BstNI	CCWGG	2 cut(s)	884, 1096
BstNSI	RCATGY	2 cut(s)	907, 1170
BstSCI	CCNGG	2 cut(s)	882, 1094
BstSLI	GKGCMC	2 cut(s)	393, 439
BstV1I	GCAGC	5 cut(s)	682, 1024, 1268, 1392, 1425
BstV2I	GAAGAC	1 cut(s)	40
BstX2I	RGATCY	4 cut(s)	268, 604, 783, 1186
BstXI	CCANNNNNNTGG	1 cut(s)	362
BstYI	RGATCY	4 cut(s)	268, 604, 783, 1186
BstZ17I	GTATAC	1 cut(s)	889
BsuRI	GGCC	2 cut(s)	5, 1250
BtgI	CCRYGG	2 cut(s)	1251, 1298
BtsCI	GGATG	1 cut(s)	879
BtsI	GCAGTG	1 cut(s)	1089
BtsIMutI	CAGTG	3 cut(s)	152, 439, 1089
Cac8I	GCNNGC	4 cut(s)	287, 670, 1209, 1418
CciI	TCATGA	1 cut(s)	1129
Cfr10I	RCCGGY	1 cut(s)	99
Csp6I	GTAC	3 cut(s)	482, 635, 645
CviQI	GTAC	3 cut(s)	482, 635, 645
DdeI	CTNAG	4 cut(s)	608, 764, 985, 1407
DpnI	GATC	8 cut(s)	270, 561, 606, 785, 1188, 1218, 1230, 1284
DpnII	GATC	8 cut(s)	268, 559, 604, 783, 1186, 1216, 1228, 1282
DraI	TTTAAA	2 cut(s)	55, 472
DriI	GACNNNNNGTC	1 cut(s)	1396
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1142
Eam1105I	GACNNNNNGTC	1 cut(s)	1396
EarI	CTCTTC	1 cut(s)	1142
Eco130I	CCWWGG	2 cut(s)	1251, 1298
Eco31I	GGTCTC	1 cut(s)	1324
Eco57I	CTGAAG	3 cut(s)	297, 846, 1182
Eco88I	CYCGRG	1 cut(s)	1017
EcoNI	CCTNNNNNAGG	1 cut(s)	1421
EcoRI	GAATTC	1 cut(s)	160
EcoRII	CCWGG	2 cut(s)	882, 1094
EcoT14I	CCWWGG	2 cut(s)	1251, 1298
EcoT22I	ATGCAT	1 cut(s)	29
ErhI	CCWWGG	2 cut(s)	1251, 1298
FalI	AAGNNNNNCTT	4 cut(s)	518, 550, 819, 851
FaqI	GGGAC	1 cut(s)	898
FauNDI	CATATG	1 cut(s)	1221
FbaI	TGATCA	1 cut(s)	1228
FblI	GTMKAC	1 cut(s)	888
Fnu4HI	GCNGC	5 cut(s)	696, 1038, 1257, 1381, 1414
FokI	GGATG	1 cut(s)	866
Fsp4HI	GCNGC	5 cut(s)	696, 1038, 1257, 1381, 1414
FspBI	CTAG	2 cut(s)	90, 227
GluI	GCNGC	5 cut(s)	696, 1038, 1257, 1381, 1414
GsaI	CCCAGC	1 cut(s)	1361
HaeIII	GGCC	2 cut(s)	5, 1250
HapII	CCGG	2 cut(s)	100, 947
HindIII	AAGCTT	2 cut(s)	442, 828
HinfI	GANTC	4 cut(s)	708, 1157, 1397, 1446
HpaII	CCGG	2 cut(s)	100, 947
HphI	GGTGA	3 cut(s)	75, 343, 410
Hpy166II	GTNNAC	6 cut(s)	110, 391, 437, 889, 1057, 1087
Hpy188I	TCNGA	5 cut(s)	1009, 1078, 1162, 1246, 1282
Hpy188III	TCNNGA	7 cut(s)	38, 90, 656, 863, 1019, 1130, 1190
Hpy8I	GTNNAC	6 cut(s)	110, 391, 437, 889, 1057, 1087
HpyAV	CCTTC	5 cut(s)	96, 130, 360, 774, 845
HpyCH4III	ACNGT	7 cut(s)	147, 406, 631, 965, 1121, 1275, 1462
HpyCH4IV	ACGT	2 cut(s)	72, 679
HpyF10VI	GCNNNNNNNGC	3 cut(s)	966, 986, 1256
HpyF3I	CTNAG	4 cut(s)	608, 764, 985, 1407
HpySE526I	ACGT	2 cut(s)	72, 679
Ksp22I	TGATCA	1 cut(s)	1228
Kzo9I	GATC	8 cut(s)	268, 559, 604, 783, 1186, 1216, 1228, 1282
LmnI	GCTCC	1 cut(s)	513
Lsp1109I	GCAGC	5 cut(s)	682, 1024, 1268, 1392, 1425
LweI	GCATC	3 cut(s)	438, 1012, 1205
MaeI	CTAG	2 cut(s)	90, 227
MaeII	ACGT	2 cut(s)	72, 679
MaeIII	GTNAC	2 cut(s)	331, 530
MalI	GATC	8 cut(s)	270, 561, 606, 785, 1188, 1218, 1230, 1284
MboI	GATC	8 cut(s)	268, 559, 604, 783, 1186, 1216, 1228, 1282
MboII	GAAGA	4 cut(s)	40, 163, 614, 1159
MfeI	CAATTG	1 cut(s)	517
MflI	RGATCY	4 cut(s)	268, 604, 783, 1186
MhlI	GDGCHC	3 cut(s)	393, 439, 670
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1151, 1406, 1455
MmeI	TCCRAC	2 cut(s)	343, 491
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	29
MroXI	GAANNNNTTC	2 cut(s)	343, 870
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	54, 278, 308, 471, 543, 741, 1182
MslI	CAYNNNNRTG	4 cut(s)	145, 396, 794, 1062
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	317
MspI	CCGG	2 cut(s)	100, 947
MspR9I	CCNGG	2 cut(s)	884, 1096
MunI	CAATTG	1 cut(s)	517
Mva1269I	GAATGC	1 cut(s)	672
MvaI	CCWGG	2 cut(s)	884, 1096
MwoI	GCNNNNNNNGC	3 cut(s)	966, 986, 1256
NcoI	CCATGG	2 cut(s)	1251, 1298
NdeI	CATATG	1 cut(s)	1221
NdeII	GATC	8 cut(s)	268, 559, 604, 783, 1186, 1216, 1228, 1282
NlaIV	GGNNCC	3 cut(s)	141, 353, 785
NmuCI	GTSAC	2 cut(s)	331, 530
NsiI	ATGCAT	1 cut(s)	29
NspI	RCATGY	2 cut(s)	907, 1170
NspV	TTCGAA	1 cut(s)	164
OliI	CACNNNNGTG	3 cut(s)	145, 396, 1062
PaeR7I	CTCGAG	1 cut(s)	1017
PagI	TCATGA	1 cut(s)	1129
PcsI	WCGNNNNNNNCGW	1 cut(s)	676
PctI	GAATGC	1 cut(s)	672
PdmI	GAANNNNTTC	2 cut(s)	343, 870
PfeI	GAWTC	1 cut(s)	708
PkrI	GCNGC	5 cut(s)	697, 1039, 1258, 1382, 1415
PleI	GAGTC	3 cut(s)	1151, 1405, 1454
PpsI	GAGTC	3 cut(s)	1151, 1405, 1454
Ppu21I	YACGTR	1 cut(s)	680
Psp1406I	AACGTT	1 cut(s)	72
Psp6I	CCWGG	2 cut(s)	882, 1094
PspFI	CCCAGC	1 cut(s)	1357
PspGI	CCWGG	2 cut(s)	882, 1094
PspN4I	GGNNCC	3 cut(s)	141, 353, 785
PsrI	GAACNNNNNNTAC	2 cut(s)	858, 890
PsuI	RGATCY	4 cut(s)	268, 604, 783, 1186
PvuII	CAGCTG	1 cut(s)	317
RsaI	GTAC	3 cut(s)	483, 636, 646
RsaNI	GTAC	3 cut(s)	482, 635, 645
RseI	CAYNNNNRTG	4 cut(s)	145, 396, 794, 1062
SaqAI	TTAA	7 cut(s)	54, 278, 308, 471, 543, 741, 1182
SatI	GCNGC	5 cut(s)	696, 1038, 1257, 1381, 1414
Sau3AI	GATC	8 cut(s)	268, 559, 604, 783, 1186, 1216, 1228, 1282
ScaI	AGTACT	1 cut(s)	646
SchI	GAGTC	3 cut(s)	1151, 1406, 1455
ScrFI	CCNGG	2 cut(s)	884, 1096
SduI	GDGCHC	3 cut(s)	393, 439, 670
SfaNI	GCATC	3 cut(s)	438, 1012, 1205
Sfr274I	CTCGAG	1 cut(s)	1017
SfuI	TTCGAA	1 cut(s)	164
SlaI	CTCGAG	1 cut(s)	1017
SmiMI	CAYNNNNRTG	4 cut(s)	145, 396, 794, 1062
SmlI	CTYRAG	3 cut(s)	457, 1017, 1190
SmoI	CTYRAG	3 cut(s)	457, 1017, 1190
SsiI	CCGC	1 cut(s)	370
SspMI	CTAG	2 cut(s)	90, 227
StyD4I	CCNGG	2 cut(s)	882, 1094
StyI	CCWWGG	2 cut(s)	1251, 1298
TaaI	ACNGT	7 cut(s)	147, 406, 631, 965, 1121, 1275, 1462
TaiI	ACGT	2 cut(s)	75, 682
TaqI	TCGA	6 cut(s)	128, 164, 655, 838, 1018, 1215
TatI	WGTACW	1 cut(s)	644
TfiI	GAWTC	1 cut(s)	708
Tru1I	TTAA	7 cut(s)	54, 278, 308, 471, 543, 741, 1182
Tru9I	TTAA	7 cut(s)	54, 278, 308, 471, 543, 741, 1182
TscAI	CASTG	3 cut(s)	152, 439, 1089
TseFI	GTSAC	2 cut(s)	331, 530
TseI	GCWGC	5 cut(s)	695, 1037, 1256, 1380, 1413
Tsp45I	GTSAC	2 cut(s)	331, 530
TspDTI	ATGAA	7 cut(s)	12, 44, 83, 639, 812, 1118, 1146
TspGWI	ACGGA	1 cut(s)	701
TspRI	CASTG	3 cut(s)	152, 439, 1089
VneI	GTGCAC	2 cut(s)	389, 435
XagI	CCTNNNNNAGG	1 cut(s)	1421
XapI	RAATTY	3 cut(s)	160, 745, 851
XbaI	TCTAGA	1 cut(s)	89
XceI	RCATGY	2 cut(s)	907, 1170
XhoI	CTCGAG	1 cut(s)	1017
XmiI	GTMKAC	1 cut(s)	888
XmnI	GAANNNNTTC	2 cut(s)	343, 870
XspI	CTAG	2 cut(s)	90, 227
ZrmI	AGTACT	1 cut(s)	646
Zsp2I	ATGCAT	1 cut(s)	29

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.