MD07G1194400.v1.1

ACT domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
27384631 .. 27388076
3446 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1194400.v1.1.491

Sequence Viewer

Length: 1266 bp
ATGGGCATTCCCTGCGACGATGTCGTCGTGATCCAGCCGGGGAAGACCCCCGACGAGCCCTCCGTCCTCACCCTCAACTGCCCCGACAAGGCCGGCCTCGGCTGCGACCTCTGCAGAATCATCCTCCAGTTCGGCCTTTCTATTACGAAAGCAGATTTCTCGACGGATGGAAGGTGGTGCTATATAGTGTTGTGGGTCGTCCCCCACCACCAATCCCTGAAGGTCGATTGGGAGAGCTTGAAGGATCGGCTCTCCTCTGCGTGCCCGTCGTCGTGCTTCTTCTCGTTTTACGTCAATCAAATCTCCGACGTCCCCACGCCCTCTCCGGTCTATCTGTTGAAGTTTTGGTGCCACAACCAGAGAGGCTCACTCCACGATGTTACCAAAGTGCTATGTGAGCTTGAAATTGTGATTCAGAGAGTGAAAGTGATGCCGACCCCGGATGGCAGAGTTTTGGACCTCTTCTTCATCACAGATTGCTTGGAGTTGTTACACACAAAACAGAGGAGAGACGACATATGTGAGCATCTGATGGCTGCTTTGGGAGAGTATTGCATCACCTGTGAGCTTAAGTTGCCTGGGCCTGAGTATGAAAGTCTGCAGGGGAATTCTTCCCTTCCACCAGCCCTTGCTGACGAATTGTTTAGCTATCAGCTGAAGGATGAGGAAGCTTATCCAAAAGCGCTCACCCGAAATATGAGAACGGTGAAAAAGACCAGTATTACAGTGGATAATTCATTGAGCCCTGTTCATACGGTACTGCAAATACAGTGTGTTGACCGGAAGGCCCTCTTTTATGACATTATGAGGACTTCCAAGGACTGCAATATTCAGGTTGCCTATGGTAGATTCTCGTCACCTGTGAAAGGCTTCCGGAATTTGGACCTATTTATTCAGCAGACAAATGGAAAAAAGATTGTTGATCCTGAAGTTCAGGTTGCATTGTGTGCTCGTTTAAAGGAAGAGATGGTTCACCCACTGCGAGTGATCGTTGCCAACAGGGGCCCGGAAACCGAACTCTTAGTTGCTAATCCAGTTGAGTTATCTGGAAAGGGGAGGCCCCTCGTATTCTATGATGTTACTCTAGCACTGAAGCAATTGGGAGCATCTATTTTTGCGGCTGAAATTGTAAGGCATTCAACTTCAGTTTGCCAGTGGGAAATCTACCGATTTCTTTTGGATGATAGTCTTGAATTTCCGTTGGCAAGCAAACAAAATAGAAGTAATATTGTAGAGAGAGTTAGAAGAACCCTCATGGGCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

422

Amino Acids

47.6

Weight (kDa)

6.33

Isoelectric Point (pI)

40.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ACR10_N PF24914 12 - 89 6.4e-40 ACT domain-containing protein ACR10, N-terminal
ACT_ACR9_3rd PF24931 240 - 337 4.5e-46 ACR9-like, ACT-like domain
ACT_ACR9_C PF24926 338 - 420 1.7e-36 ACT domain-containing protein ACR9, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 23
AatII GACGTC 1 cut(s) 312
AccB1I GGYRCC 1 cut(s) 348
AccIII TCCGGA 1 cut(s) 873
AciI CCGC 1 cut(s) 1118
AclWI GGATC 3 cut(s) 25, 252, 917
AcsI RAATTY 3 cut(s) 607, 877, 1193
AcuI CTGAAG 5 cut(s) 239, 677, 948, 1112, 1128
AcyI GRCGYC 1 cut(s) 309
AfaI GTAC 1 cut(s) 759
AfeI AGCGCT 1 cut(s) 684
AfiI CCNNNNNNNGG 3 cut(s) 88, 866, 880
AflII CTTAAG 1 cut(s) 569
AgsI TTSAA 5 cut(s) 241, 340, 404, 1140, 1193
AjnI CCWGG 1 cut(s) 577
AluBI AGCT 6 cut(s) 237, 400, 568, 648, 655, 671
AluI AGCT 6 cut(s) 237, 400, 568, 648, 655, 671
Alw21I GWGCWC 1 cut(s) 952
Alw26I GTCTC 1 cut(s) 504
AlwI GGATC 3 cut(s) 25, 252, 917
Aor13HI TCCGGA 1 cut(s) 873
Aor51HI AGCGCT 1 cut(s) 684
AoxI GGCC 7 cut(s) 90, 94, 133, 581, 786, 1003, 1058
ApaI GGGCCC 1 cut(s) 1007
ApeKI GCWGC 2 cut(s) 102, 536
ApoI RAATTY 3 cut(s) 607, 877, 1193
Asp700I GAANNNNTTC 1 cut(s) 869
AspLEI GCGC 1 cut(s) 685
AspS9I GGNCC 7 cut(s) 457, 581, 787, 883, 1003, 1004, 1059
AsuC2I CCSGG 3 cut(s) 39, 440, 1007
AsuHPI GGTGA 6 cut(s) 61, 550, 679, 718, 849, 965
AvaII GGWCC 2 cut(s) 457, 883
BaeGI GKGCMC 2 cut(s) 266, 1007
BanI GGYRCC 1 cut(s) 348
BanII GRGCYC 3 cut(s) 60, 746, 1007
BbsI GAAGAC 1 cut(s) 50
Bbv12I GWGCWC 1 cut(s) 952
BbvI GCAGC 2 cut(s) 89, 523
BccI CCATC 4 cut(s) 161, 437, 526, 961
BcgI CGANNNNNNTGC 2 cut(s) 141, 175
BciT130I CCWGG 1 cut(s) 579
BcnI CCSGG 3 cut(s) 39, 440, 1007
BcoDI GTCTC 1 cut(s) 504
BfaI CTAG 1 cut(s) 1085
BfmI CTRYAG 2 cut(s) 112, 599
BfoI RGCGCY 1 cut(s) 686
BfrI CTTAAG 1 cut(s) 569
BisI GCNGC 3 cut(s) 103, 537, 1119
BlsI GCNGC 3 cut(s) 104, 538, 1120
Bme1390I CCNGG 4 cut(s) 39, 440, 579, 1007
Bme18I GGWCC 2 cut(s) 457, 883
BmgT120I GGNCC 7 cut(s) 457, 581, 787, 883, 1003, 1004, 1059
BmiI GGNNCC 4 cut(s) 350, 1004, 1005, 1061
BmrFI CCNGG 4 cut(s) 39, 440, 579, 1007
BmsI GCATC 4 cut(s) 420, 535, 564, 1115
BpiI GAAGAC 1 cut(s) 50
BplI GAGNNNNNCTC 2 cut(s) 354, 386
BpmI CTGGAG 1 cut(s) 110
BpuMI CCSGG 3 cut(s) 39, 440, 1007
BsaHI GRCGYC 1 cut(s) 309
BsaJI CCNNGG 5 cut(s) 38, 97, 438, 578, 816
BsaWI WCCGGW 3 cut(s) 325, 780, 873
BsaXI ACNNNNNCTCC 4 cut(s) 44, 74, 307, 337
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 866, 880
Bse118I RCCGGY 1 cut(s) 92
Bse1I ACTGG 4 cut(s) 127, 717, 1034, 1153
BseAI TCCGGA 1 cut(s) 873
BseBI CCWGG 1 cut(s) 579
BseDI CCNNGG 5 cut(s) 38, 97, 438, 578, 816
BseGI GGATG 5 cut(s) 120, 172, 448, 667, 1186
BseLI CCNNNNNNNGG 3 cut(s) 88, 866, 880
BseMII CTCAG 1 cut(s) 576
BseNI ACTGG 4 cut(s) 127, 717, 1034, 1153
BseRI GAGGAG 2 cut(s) 244, 520
BseSI GKGCMC 2 cut(s) 266, 1007
BseXI GCAGC 2 cut(s) 89, 523
BshFI GGCC 7 cut(s) 92, 96, 135, 583, 788, 1005, 1060
BshNI GGYRCC 1 cut(s) 348
BsiHKAI GWGCWC 1 cut(s) 952
BsiSI CCGG 7 cut(s) 38, 93, 326, 440, 781, 874, 1007
BslFI GGGAC 2 cut(s) 185, 296
BslI CCNNNNNNNGG 3 cut(s) 88, 866, 880
BsmAI GTCTC 1 cut(s) 504
BsmBI CGTCTC 1 cut(s) 504
BsmFI GGGAC 2 cut(s) 185, 296
BsmI GAATGC 2 cut(s) 6, 1135
BsnI GGCC 7 cut(s) 92, 96, 135, 583, 788, 1005, 1060
Bsp120I GGGCCC 1 cut(s) 1003
Bsp1286I GDGCHC 5 cut(s) 60, 266, 746, 952, 1007
Bsp13I TCCGGA 1 cut(s) 873
Bsp143I GATC 4 cut(s) 30, 244, 922, 987
BspACI CCGC 1 cut(s) 1118
BspANI GGCC 7 cut(s) 92, 96, 135, 583, 788, 1005, 1060
BspCNI CTCAG 1 cut(s) 577
BspEI TCCGGA 1 cut(s) 873
BspLI GGNNCC 4 cut(s) 350, 1004, 1005, 1061
BspMAI CTGCAG 2 cut(s) 116, 603
BspPI GGATC 3 cut(s) 25, 252, 917
BspT107I GGYRCC 1 cut(s) 348
BspTI CTTAAG 1 cut(s) 569
BsrFI RCCGGY 1 cut(s) 92
BsrI ACTGG 4 cut(s) 127, 717, 1034, 1153
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 5 cut(s) 38, 97, 438, 578, 816
BssMI GATC 4 cut(s) 30, 244, 922, 987
BssNI GRCGYC 1 cut(s) 309
BssT1I CCWWGG 1 cut(s) 816
Bst2UI CCWGG 1 cut(s) 579
Bst4CI ACNGT 4 cut(s) 706, 727, 757, 771
Bst6I CTCTTC 2 cut(s) 467, 957
BstACI GRCGYC 1 cut(s) 309
BstAFI CTTAAG 1 cut(s) 569
BstAPI GCANNNNNTGC 2 cut(s) 12, 947
BstC8I GCNNGC 3 cut(s) 94, 262, 1207
BstDEI CTNAG 2 cut(s) 585, 1021
BstENI CCTNNNNNAGG 1 cut(s) 864
BstF5I GGATG 5 cut(s) 120, 172, 448, 667, 1186
BstH2I RGCGCY 1 cut(s) 686
BstHHI GCGC 1 cut(s) 685
BstKTI GATC 4 cut(s) 33, 247, 925, 990
BstMAI GTCTC 1 cut(s) 504
BstMBI GATC 4 cut(s) 30, 244, 922, 987
BstMWI GCNNNNNNNGC 6 cut(s) 12, 102, 111, 397, 574, 947
BstNI CCWGG 1 cut(s) 579
BstSCI CCNGG 4 cut(s) 37, 438, 577, 1005
BstSFI CTRYAG 2 cut(s) 112, 599
BstSLI GKGCMC 2 cut(s) 266, 1007
BstV1I GCAGC 2 cut(s) 89, 523
BstV2I GAAGAC 1 cut(s) 50
BsuRI GGCC 7 cut(s) 92, 96, 135, 583, 788, 1005, 1060
BtsCI GGATG 5 cut(s) 120, 172, 448, 667, 1186
BtsI GCAGTG 1 cut(s) 977
BtsIMutI CAGTG 5 cut(s) 732, 776, 977, 1088, 1160
Cac8I GCNNGC 3 cut(s) 94, 262, 1207
CfoI GCGC 1 cut(s) 685
Cfr10I RCCGGY 1 cut(s) 92
Cfr13I GGNCC 7 cut(s) 457, 581, 787, 883, 1003, 1004, 1059
Csp6I GTAC 1 cut(s) 758
CviAII CATG 1 cut(s) 1255
CviQI GTAC 1 cut(s) 758
DdeI CTNAG 2 cut(s) 585, 1021
DpnI GATC 4 cut(s) 32, 246, 924, 989
DpnII GATC 4 cut(s) 30, 244, 922, 987
DraI TTTAAA 1 cut(s) 957
DrdI GACNNNNNNGTC 1 cut(s) 23
DseDI GACNNNNNNGTC 1 cut(s) 23
Eam1104I CTCTTC 2 cut(s) 467, 957
EarI CTCTTC 2 cut(s) 467, 957
Eco130I CCWWGG 1 cut(s) 816
Eco24I GRGCYC 3 cut(s) 60, 746, 1007
Eco47I GGWCC 2 cut(s) 457, 883
Eco47III AGCGCT 1 cut(s) 684
Eco57I CTGAAG 5 cut(s) 239, 677, 948, 1112, 1128
EcoNI CCTNNNNNAGG 1 cut(s) 864
EcoO109I RGGNCCY 3 cut(s) 787, 1003, 1059
EcoRI GAATTC 1 cut(s) 607
EcoRII CCWGG 1 cut(s) 577
EcoT14I CCWWGG 1 cut(s) 816
EcoT38I GRGCYC 3 cut(s) 60, 746, 1007
ErhI CCWWGG 1 cut(s) 816
Esp3I CGTCTC 1 cut(s) 504
FaeI CATG 1 cut(s) 1258
FalI AAGNNNNNCTT 2 cut(s) 776, 808
FaqI GGGAC 2 cut(s) 185, 296
FatI CATG 1 cut(s) 1254
FauNDI CATATG 1 cut(s) 518
Fnu4HI GCNGC 3 cut(s) 103, 537, 1119
FokI GGATG 5 cut(s) 107, 179, 455, 674, 1193
FriOI GRGCYC 3 cut(s) 60, 746, 1007
FseI GGCCGGCC 1 cut(s) 96
Fsp4HI GCNGC 3 cut(s) 103, 537, 1119
FspBI CTAG 1 cut(s) 1085
GlaI GCGC 1 cut(s) 684
GluI GCNGC 3 cut(s) 103, 537, 1119
GsuI CTGGAG 1 cut(s) 110
HaeII RGCGCY 1 cut(s) 686
HaeIII GGCC 7 cut(s) 92, 96, 135, 583, 788, 1005, 1060
HapII CCGG 7 cut(s) 38, 93, 326, 440, 781, 874, 1007
HhaI GCGC 1 cut(s) 685
Hin1I GRCGYC 1 cut(s) 309
Hin1II CATG 1 cut(s) 1258
Hin6I GCGC 1 cut(s) 683
HinP1I GCGC 1 cut(s) 683
HincII GTYRAC 1 cut(s) 778
HindII GTYRAC 1 cut(s) 778
HindIII AAGCTT 1 cut(s) 669
HinfI GANTC 3 cut(s) 117, 412, 849
HpaII CCGG 7 cut(s) 38, 93, 326, 440, 781, 874, 1007
HphI GGTGA 6 cut(s) 61, 550, 679, 718, 849, 965
Hpy166II GTNNAC 2 cut(s) 778, 973
Hpy188I TCNGA 3 cut(s) 307, 417, 531
Hpy188III TCNNGA 6 cut(s) 28, 160, 874, 926, 1047, 1190
Hpy8I GTNNAC 2 cut(s) 778, 973
Hpy99I CGWCG 7 cut(s) 20, 29, 56, 166, 271, 274, 311
HpyAV CCTTC 6 cut(s) 165, 214, 235, 626, 652, 778
HpyCH4III ACNGT 4 cut(s) 706, 727, 757, 771
HpyCH4IV ACGT 2 cut(s) 291, 309
HpyCH4V TGCA 6 cut(s) 114, 555, 601, 763, 825, 941
HpyF10VI GCNNNNNNNGC 6 cut(s) 12, 102, 111, 397, 574, 947
HpyF3I CTNAG 2 cut(s) 585, 1021
HpySE526I ACGT 2 cut(s) 291, 309
Hsp92I GRCGYC 1 cut(s) 309
Hsp92II CATG 1 cut(s) 1258
HspAI GCGC 1 cut(s) 683
Kpn2I TCCGGA 1 cut(s) 873
KroI GCCGGC 1 cut(s) 92
KroNI GCCGGC 1 cut(s) 94
Kzo9I GATC 4 cut(s) 30, 244, 922, 987
LmnI GCTCC 1 cut(s) 1103
Lsp1109I GCAGC 2 cut(s) 89, 523
LweI GCATC 4 cut(s) 420, 535, 564, 1115
MaeI CTAG 1 cut(s) 1085
MaeII ACGT 2 cut(s) 291, 309
MaeIII GTNAC 4 cut(s) 379, 489, 855, 1078
MalI GATC 4 cut(s) 32, 246, 924, 989
MboI GATC 4 cut(s) 30, 244, 922, 987
MboII GAAGA 7 cut(s) 55, 271, 454, 457, 603, 974, 1257
MfeI CAATTG 1 cut(s) 1097
MhlI GDGCHC 5 cut(s) 60, 266, 746, 952, 1007
MluCI AATT 8 cut(s) 405, 607, 638, 733, 877, 1097, 1125, 1193
MmeI TCCRAC 1 cut(s) 330
MroI TCCGGA 1 cut(s) 873
MroNI GCCGGC 1 cut(s) 92
MroXI GAANNNNTTC 1 cut(s) 869
MseI TTAA 2 cut(s) 570, 956
MspA1I CMGCKG 1 cut(s) 655
MspCI CTTAAG 1 cut(s) 569
MspI CCGG 7 cut(s) 38, 93, 326, 440, 781, 874, 1007
MspR9I CCNGG 4 cut(s) 39, 440, 579, 1007
MunI CAATTG 1 cut(s) 1097
Mva1269I GAATGC 2 cut(s) 6, 1135
MvaI CCWGG 1 cut(s) 579
MwoI GCNNNNNNNGC 6 cut(s) 12, 102, 111, 397, 574, 947
NaeI GCCGGC 1 cut(s) 94
NciI CCSGG 3 cut(s) 39, 440, 1007
NdeI CATATG 1 cut(s) 518
NdeII GATC 4 cut(s) 30, 244, 922, 987
NgoMIV GCCGGC 1 cut(s) 92
NlaIII CATG 1 cut(s) 1258
NlaIV GGNNCC 4 cut(s) 350, 1004, 1005, 1061
NmeAIII GCCGAG 1 cut(s) 78
NmuCI GTSAC 1 cut(s) 855
PcsI WCGNNNNNNNCGW 2 cut(s) 24, 60
PctI GAATGC 2 cut(s) 6, 1135
PdiI GCCGGC 1 cut(s) 94
PdmI GAANNNNTTC 1 cut(s) 869
PfeI GAWTC 3 cut(s) 117, 412, 849
PflFI GACNNNGTC 1 cut(s) 20
PkrI GCNGC 3 cut(s) 104, 538, 1120
Psp6I CCWGG 1 cut(s) 577
PspGI CCWGG 1 cut(s) 577
PspN4I GGNNCC 4 cut(s) 350, 1004, 1005, 1061
PspOMI GGGCCC 1 cut(s) 1003
PspPI GGNCC 7 cut(s) 457, 581, 787, 883, 1003, 1004, 1059
PstI CTGCAG 2 cut(s) 116, 603
PsyI GACNNNGTC 1 cut(s) 20
PvuII CAGCTG 1 cut(s) 655
RigI GGCCGGCC 1 cut(s) 96
RsaI GTAC 1 cut(s) 759
RsaNI GTAC 1 cut(s) 758
SaqAI TTAA 2 cut(s) 570, 956
SatI GCNGC 3 cut(s) 103, 537, 1119
Sau3AI GATC 4 cut(s) 30, 244, 922, 987
Sau96I GGNCC 7 cut(s) 457, 581, 787, 883, 1003, 1004, 1059
ScrFI CCNGG 4 cut(s) 39, 440, 579, 1007
SduI GDGCHC 5 cut(s) 60, 266, 746, 952, 1007
SfaNI GCATC 4 cut(s) 420, 535, 564, 1115
SfcI CTRYAG 2 cut(s) 112, 599
SinI GGWCC 2 cut(s) 457, 883
SmlI CTYRAG 1 cut(s) 569
SmoI CTYRAG 1 cut(s) 569
Sse9I AATT 8 cut(s) 405, 607, 638, 733, 877, 1097, 1125, 1193
SsiI CCGC 1 cut(s) 1118
SspI AATATT 2 cut(s) 829, 1228
SspMI CTAG 1 cut(s) 1085
StyD4I CCNGG 4 cut(s) 37, 438, 577, 1005
StyI CCWWGG 1 cut(s) 816
TaaI ACNGT 4 cut(s) 706, 727, 757, 771
TaiI ACGT 2 cut(s) 294, 312
TaqI TCGA 2 cut(s) 161, 225
TasI AATT 8 cut(s) 405, 607, 638, 733, 877, 1097, 1125, 1193
TauI GCSGC 1 cut(s) 1121
TfiI GAWTC 3 cut(s) 117, 412, 849
Tru1I TTAA 2 cut(s) 570, 956
Tru9I TTAA 2 cut(s) 570, 956
TscAI CASTG 5 cut(s) 732, 776, 984, 1095, 1160
TseFI GTSAC 1 cut(s) 855
TseI GCWGC 2 cut(s) 102, 536
Tsp45I GTSAC 1 cut(s) 855
TspDTI ATGAA 4 cut(s) 457, 606, 726, 740
TspGWI ACGGA 3 cut(s) 52, 179, 1188
TspRI CASTG 5 cut(s) 732, 776, 984, 1095, 1160
Tth111I GACNNNGTC 1 cut(s) 20
Vha464I CTTAAG 1 cut(s) 569
VpaK11BI GGWCC 2 cut(s) 457, 883
XagI CCTNNNNNAGG 1 cut(s) 864
XapI RAATTY 3 cut(s) 607, 877, 1193
XcmI CCANNNNNNNNNTGG 1 cut(s) 724
XmnI GAANNNNTTC 1 cut(s) 869
XspI CTAG 1 cut(s) 1085
ZraI GACGTC 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.