Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0003975

Physical Location & Seq

Genomic Coordinates Forward (+)

13473295 .. 13480740

Gene Structure 7446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1089900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGGAGTCTGCACTTCGAAACCTCCAAAGCAGAACCCATATTCCCCAAGGGACGTAAATGACCCAAATCACCCTTCCCAAACCCCCAAATCCCTCCCATCCCACACTCCTCACCACCAGAGAGACGACGTCGCTTCACGCCAGTCCCAGTCCCAGTCCCCCTTCTACTCCTTCTACAGTCCCAGCCCTGCCCATTACCTCAAGAAGTCGTCCCCGTCGCGGAGCAAGAGCGCCACTTCCACCCCCAGCCGGTTTTTCCGCCGACCCTTTCCGCCTCCGTCGCCGGCGAAGCACATTAAGGCCGTGCTCGCCCGGCGGCTGGGCAAAAAGGCATCGGCTTCAGTGGCGATACCGGAGGACGGAGAGGAGGAGGATGGGGTTGAGCTGGACAAGAGGTTTGGGTTCTCCAAGGAGGTAACGAGTCGATTGGAGGTTGGGGACGAACTGGGTCGAGGGCATTTTGGATATACTTGCTCTGCTAGGTACAAAAAGGGGGAGTTTAAGGGTCAGCAGGTCGCTGTGAAGGTCATCCCTAAAACAAAGATGACAACCGCTATTGCAATCGAGGATGTGAGAAGGGAGGTCAAGATATTGCGAGCCTTGAGTGGACATAGCAATCTAGTTAAGTTCTATGATGCATTTGAAGACAGTGATAATGTCTACCTAGTAATGGAGTTGTGTGAAGGTGGAGAGCTTTTAGATAGAATACTTTCAAGGGGCGGGAAATACTCAGAAGATGATGCGAAGACTGTCATGGTGCAAATACTGAATGTTGTCGCATTTTGTCATCTCCAGGGTGTGGTACACAGGGATCTTAAGCCAGAGAACTTTTTGTATACCGCCAAAGATGAGAATTCCCAGTTGAAAGCCATTGACTTTGGCTTGTCAGATTTTGCCAGACCAGACCAGAGGCTTAATGATATTGTTGGAAGTGCATACTATGTCGCACCCGAAGTTCTGCATAGATCTTATAGTACAGAGGCTGATGTATGGAGTATTGGTGTAATAGCATATATTCTCTTATGTGGTAGCCGTCCATTTTGGTCCCGGACTGAGTCTGGAATTTTTCGGTCGGTCTTGAAAGCTGATCCAAGTTTTGATGAAGCACCTTGGCCCACTTTATCTCTTGAAGCAAAGGACTTTGTCAAACGCTTACTGAACAAGGACCCTCGGAAACGAATGACAGCAGCTCAGGCTTTAAGTCATCCTTGGATCCGGAATTATAGTGACATAAAAGTGCCACTTGATATTTTAGTATTTAGACTCATGAAGGCTTATATGCGATCATCATCCCTTCGGAAGGCTGCTTTAAGGGCCTTGTCTAAGACATTGACTATTGATGAACTATTTTATCTGAAGGAGCAGTTTGCTCTATTGGAGCCAAACAAAAATGGAACTATAACTCTTGACAATATTAGAATGGTCCTCACGAAAAATGCTACAGACGCAATGAAGGAGTCCCGCATTCCTGATCTCATTTCATCGCTAAATGCACTTCAATACAGAAGAATGGATTTTGATGAGTTCTGTGCAGCTGCATTAAGTGTTCATCAGCTCGAGGCACTTGATCGTTGGGAACAACATGCTCGATGTGCATATGAACTTTTCGAGAAGGATGGAAACAGGGCAATTGTCATTGAAGAACTTGCTTCGGAACTTGGGCTTGGTCCTTCCATCCCACTTCATGTGGTTCTCCATGACTGGATTAGGCACACTGATGGGAAGCTAAGCTTCCTTGGGTTTGTGAAATTGTTGCATGGTGTGTCCAGCCGGGCGTTTGTAAAAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0004713 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018108 GO:0018193 GO:0018209 GO:0018212 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

597

Amino Acids

67.16

Weight (kDa)

9.06

Isoelectric Point (pI)

52.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	144 - 405	2.6e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	144 - 398	1.8e-34	Protein tyrosine and serine/threonine kinase
ABC1	PF03109	217 - 305	3.3e-06	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49580 AT3G19100
fragaria_vesca	FvH4_2g06730
malus_domestica	MD05G1075300.v1.1 MD10G1089900.v1.1
prunus_persica	Prupe.8G117200_v2.0.a1 Prupe.8G117200_v2.0.a1
pyrus_communis	pycom10g07340
rosa_chinensis	RchiOBHm_Chr6g0258891 RchiOBHm_Chr6g0258921
rosa_laevigata	RLG00000002771 RLG00000014571 RLG00000014574 RLG00000014576
rosa_multiflora	Rmu_co8233831.1_g000001 Rmu_sc0004347.1_g000001 Rmu_sc0004485.1_g000023 Rmu_sc0005290.1_g000002 Rmu_sc0009697.1_g000001
rosa_roxburghii	Rroxscaffold_7G00206150 Rroxscaffold_7G00206340
rosa_rugosa	Rorug05G0584400
rosa_samantha	Rh6AG100600 Rh6AG100700 Rh6BG091900 Rh6BG092300 Rh6BG092600 Rh6BG092700 Rh6CG089800 Rh6CG089900 Rh6DG084000 Rh6DG084100
rosa_wichuraiana	Rw6G008740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	132
Acc36I	ACCTGC	1 cut(s)	502
AccB7I	CCANNNNNTGG	1 cut(s)	799
AccI	GTMKAC	2 cut(s)	660, 836
AccII	CGCG	1 cut(s)	220
AccIII	TCCGGA	1 cut(s)	1215
AciI	CCGC	8 cut(s)	220, 259, 272, 316, 552, 720, 840, 1462
AclWI	GGATC	4 cut(s)	819, 1082, 1207, 1220
AcsI	RAATTY	2 cut(s)	853, 1062
AcuI	CTGAAG	2 cut(s)	324, 1376
AcyI	GRCGYC	1 cut(s)	129
AfaI	GTAC	3 cut(s)	485, 804, 976
AfiI	CCNNNNNNNGG	7 cut(s)	219, 249, 319, 359, 670, 799, 1300
AflII	CTTAAG	1 cut(s)	815
AgsI	TTSAA	7 cut(s)	644, 714, 865, 1081, 1130, 1499, 1640
AjnI	CCWGG	1 cut(s)	792
AjuI	GAANNNNNNNTTGG	4 cut(s)	58, 90, 1647, 1679
AloI	GAACNNNNNNTCC	2 cut(s)	26, 58
AluBI	AGCT	8 cut(s)	385, 694, 1085, 1190, 1535, 1555, 1726, 1731
AluI	AGCT	8 cut(s)	385, 694, 1085, 1190, 1535, 1555, 1726, 1731
Alw21I	GWGCWC	1 cut(s)	309
Alw26I	GTCTC	1 cut(s)	117
AlwI	GGATC	4 cut(s)	819, 1082, 1207, 1220
AlwNI	CAGNNNCTG	1 cut(s)	983
Ama87I	CYCGRG	1 cut(s)	1556
Aor13HI	TCCGGA	1 cut(s)	1215
AoxI	GGCC	3 cut(s)	300, 1112, 1314
ApeKI	GCWGC	4 cut(s)	1187, 1304, 1532, 1535
ApoI	RAATTY	2 cut(s)	853, 1062
ArsI	GACNNNNNNTTYG	2 cut(s)	380, 412
Asp700I	GAANNNNTTC	1 cut(s)	709
AspLEI	GCGC	1 cut(s)	233
AspS9I	GGNCC	6 cut(s)	1044, 1113, 1165, 1314, 1423, 1667
AsuC2I	CCSGG	3 cut(s)	313, 1048, 1772
AsuHPI	GGTGA	2 cut(s)	62, 104
AsuII	TTCGAA	1 cut(s)	17
AvaI	CYCGRG	1 cut(s)	1556
AvaII	GGWCC	4 cut(s)	1044, 1165, 1423, 1667
BamHI	GGATCC	1 cut(s)	1212
BbsI	GAAGAC	2 cut(s)	651, 752
Bbv12I	GWGCWC	1 cut(s)	309
BbvI	GCAGC	4 cut(s)	1199, 1291, 1522, 1544
BccI	CCATC	5 cut(s)	106, 368, 1610, 1682, 1712
BceAI	ACGGC	2 cut(s)	287, 1017
BciT130I	CCWGG	1 cut(s)	794
BcnI	CCSGG	3 cut(s)	313, 1048, 1772
BcoDI	GTCTC	1 cut(s)	117
BfaI	CTAG	3 cut(s)	480, 620, 665
BfmI	CTRYAG	2 cut(s)	175, 1440
BfoI	RGCGCY	1 cut(s)	234
BfrI	CTTAAG	1 cut(s)	815
BfuAI	ACCTGC	1 cut(s)	502
BglII	AGATCT	1 cut(s)	965
BisI	GCNGC	5 cut(s)	317, 1188, 1305, 1533, 1536
BlpI	GCTNAGC	1 cut(s)	1727
BlsI	GCNGC	5 cut(s)	318, 1189, 1306, 1534, 1537
Bme1390I	CCNGG	4 cut(s)	313, 794, 1048, 1772
Bme18I	GGWCC	4 cut(s)	1044, 1165, 1423, 1667
BmeT110I	CYCGRG	1 cut(s)	1556
BmgT120I	GGNCC	6 cut(s)	1044, 1113, 1165, 1314, 1423, 1667
BmiI	GGNNCC	4 cut(s)	1046, 1167, 1214, 1380
BmrFI	CCNGG	4 cut(s)	313, 794, 1048, 1772
BmrI	ACTGGG	4 cut(s)	142, 148, 455, 853
BmsI	GCATC	3 cut(s)	341, 625, 730
BmuI	ACTGGG	4 cut(s)	142, 148, 455, 853
BpiI	GAAGAC	2 cut(s)	651, 752
BpmI	CTGGAG	1 cut(s)	776
Bpu10I	CCTNAGC	1 cut(s)	1191
Bpu1102I	GCTNAGC	1 cut(s)	1727
Bpu14I	TTCGAA	1 cut(s)	17
BpuEI	CTTGAG	2 cut(s)	185, 622
BpuMI	CCSGG	3 cut(s)	313, 1048, 1772
BsaBI	GATNNNNATC	1 cut(s)	1288
BsaHI	GRCGYC	1 cut(s)	129
BsaJI	CCNNGG	7 cut(s)	47, 408, 793, 1109, 1169, 1208, 1735
BsaWI	WCCGGW	2 cut(s)	352, 1215
BsaXI	ACNNNNNCTCC	2 cut(s)	985, 1015
Bsc4I	CCNNNNNNNGG	7 cut(s)	219, 249, 319, 359, 670, 799, 1300
Bse118I	RCCGGY	2 cut(s)	249, 283
Bse1I	ACTGG	6 cut(s)	142, 148, 154, 450, 859, 1706
Bse3DI	GCAATG	1 cut(s)	1455
Bse8I	GATNNNNATC	1 cut(s)	1288
BseAI	TCCGGA	1 cut(s)	1215
BseBI	CCWGG	1 cut(s)	794
BseDI	CCNNGG	7 cut(s)	47, 408, 793, 1109, 1169, 1208, 1735
BseGI	GGATG	8 cut(s)	98, 379, 528, 574, 1204, 1289, 1621, 1674
BseJI	GATNNNNATC	1 cut(s)	1288
BseLI	CCNNNNNNNGG	7 cut(s)	219, 249, 319, 359, 670, 799, 1300
BseMI	GCAATG	1 cut(s)	1455
BseMII	CTCAG	3 cut(s)	744, 1044, 1205
BseNI	ACTGG	6 cut(s)	142, 148, 154, 450, 859, 1706
BseRI	GAGGAG	3 cut(s)	99, 380, 383
BseXI	GCAGC	4 cut(s)	1199, 1291, 1522, 1544
BseYI	CCCAGC	3 cut(s)	182, 245, 319
BsgI	GTGCAG	1 cut(s)	1551
Bsh1236I	CGCG	1 cut(s)	220
Bsh1285I	CGRYCG	1 cut(s)	1073
BshFI	GGCC	3 cut(s)	302, 1114, 1316
BsiEI	CGRYCG	1 cut(s)	1073
BsiHKAI	GWGCWC	1 cut(s)	309
BsiHKCI	CYCGRG	1 cut(s)	1556
BsiSI	CCGG	7 cut(s)	250, 284, 313, 353, 1048, 1216, 1771
BslFI	GGGAC	9 cut(s)	65, 130, 136, 142, 165, 196, 452, 1030, 1444
BslI	CCNNNNNNNGG	7 cut(s)	219, 249, 319, 359, 670, 799, 1300
BsmAI	GTCTC	1 cut(s)	117
BsmBI	CGTCTC	1 cut(s)	117
BsmFI	GGGAC	9 cut(s)	65, 130, 136, 142, 165, 196, 452, 1030, 1444
BsmI	GAATGC	1 cut(s)	1464
BsnI	GGCC	3 cut(s)	302, 1114, 1316
BsoBI	CYCGRG	1 cut(s)	1556
Bsp119I	TTCGAA	1 cut(s)	17
Bsp1286I	GDGCHC	1 cut(s)	309
Bsp13I	TCCGGA	1 cut(s)	1215
Bsp143I	GATC	7 cut(s)	811, 965, 1087, 1212, 1283, 1471, 1567
Bsp1720I	GCTNAGC	1 cut(s)	1727
BspACI	CCGC	8 cut(s)	220, 259, 272, 316, 552, 720, 840, 1462
BspANI	GGCC	3 cut(s)	302, 1114, 1316
BspCNI	CTCAG	3 cut(s)	743, 1045, 1204
BspEI	TCCGGA	1 cut(s)	1215
BspFNI	CGCG	1 cut(s)	220
BspHI	TCATGA	1 cut(s)	1266
BspLI	GGNNCC	4 cut(s)	1046, 1167, 1214, 1380
BspMI	ACCTGC	1 cut(s)	502
BspPI	GGATC	4 cut(s)	819, 1082, 1207, 1220
BspT104I	TTCGAA	1 cut(s)	17
BspTI	CTTAAG	1 cut(s)	815
BsrDI	GCAATG	1 cut(s)	1455
BsrFI	RCCGGY	2 cut(s)	249, 283
BsrI	ACTGG	6 cut(s)	142, 148, 154, 450, 859, 1706
BssAI	RCCGGY	2 cut(s)	249, 283
BssECI	CCNNGG	7 cut(s)	47, 408, 793, 1109, 1169, 1208, 1735
BssMI	GATC	7 cut(s)	811, 965, 1087, 1212, 1283, 1471, 1567
BssNAI	GTATAC	1 cut(s)	837
BssNI	GRCGYC	1 cut(s)	129
BssT1I	CCWWGG	5 cut(s)	47, 408, 1109, 1208, 1735
Bst1107I	GTATAC	1 cut(s)	837
Bst2UI	CCWGG	1 cut(s)	794
Bst4CI	ACNGT	3 cut(s)	179, 650, 751
BstACI	GRCGYC	1 cut(s)	129
BstAFI	CTTAAG	1 cut(s)	815
BstBI	TTCGAA	1 cut(s)	17
BstC8I	GCNNGC	3 cut(s)	285, 309, 597
BstDEI	CTNAG	5 cut(s)	730, 1053, 1191, 1323, 1727
BstENI	CCTNNNNNAGG	1 cut(s)	1298
BstF5I	GGATG	8 cut(s)	98, 379, 528, 574, 1204, 1289, 1621, 1674
BstFNI	CGCG	1 cut(s)	220
BstH2I	RGCGCY	1 cut(s)	234
BstHHI	GCGC	1 cut(s)	233
BstKTI	GATC	7 cut(s)	814, 968, 1090, 1215, 1286, 1474, 1570
BstMAI	GTCTC	1 cut(s)	117
BstMBI	GATC	7 cut(s)	811, 965, 1087, 1212, 1283, 1471, 1567
BstMCI	CGRYCG	1 cut(s)	1073
BstMWI	GCNNNNNNNGC	9 cut(s)	280, 289, 308, 313, 344, 1193, 1313, 1445, 1592
BstNI	CCWGG	1 cut(s)	794
BstNSI	RCATGY	1 cut(s)	1586
BstSCI	CCNGG	4 cut(s)	311, 792, 1046, 1770
BstSFI	CTRYAG	2 cut(s)	175, 1440
BstUI	CGCG	1 cut(s)	220
BstV1I	GCAGC	4 cut(s)	1199, 1291, 1522, 1544
BstV2I	GAAGAC	2 cut(s)	651, 752
BstX2I	RGATCY	3 cut(s)	811, 965, 1212
BstYI	RGATCY	3 cut(s)	811, 965, 1212
BstZ17I	GTATAC	1 cut(s)	837
BsuRI	GGCC	3 cut(s)	302, 1114, 1316
BtgZI	GCGATG	1 cut(s)	1467
BtsCI	GGATG	8 cut(s)	98, 379, 528, 574, 1204, 1289, 1621, 1674
BtsIMutI	CAGTG	3 cut(s)	348, 655, 1713
BveI	ACCTGC	1 cut(s)	502
Cac8I	GCNNGC	3 cut(s)	285, 309, 597
CaiI	CAGNNNCTG	1 cut(s)	983
CciI	TCATGA	1 cut(s)	1266
CfoI	GCGC	1 cut(s)	233
Cfr10I	RCCGGY	2 cut(s)	249, 283
Cfr13I	GGNCC	6 cut(s)	1044, 1113, 1165, 1314, 1423, 1667
CseI	GACGC	1 cut(s)	1454
Csp6I	GTAC	3 cut(s)	484, 803, 975
CviAII	CATG	6 cut(s)	754, 1267, 1583, 1685, 1697, 1757
CviQI	GTAC	3 cut(s)	484, 803, 975
DdeI	CTNAG	5 cut(s)	730, 1053, 1191, 1323, 1727
DpnI	GATC	7 cut(s)	813, 967, 1089, 1214, 1285, 1473, 1569
DpnII	GATC	7 cut(s)	811, 965, 1087, 1212, 1283, 1471, 1567
EciI	GGCGGA	2 cut(s)	248, 261
Eco130I	CCWWGG	5 cut(s)	47, 408, 1109, 1208, 1735
Eco47I	GGWCC	4 cut(s)	1044, 1165, 1423, 1667
Eco57I	CTGAAG	2 cut(s)	324, 1376
Eco88I	CYCGRG	1 cut(s)	1556
EcoNI	CCTNNNNNAGG	1 cut(s)	1298
EcoO109I	RGGNCCY	2 cut(s)	1165, 1314
EcoRI	GAATTC	1 cut(s)	853
EcoRII	CCWGG	1 cut(s)	792
EcoT14I	CCWWGG	5 cut(s)	47, 408, 1109, 1208, 1735
EcoT22I	ATGCAT	1 cut(s)	640
ErhI	CCWWGG	5 cut(s)	47, 408, 1109, 1208, 1735
Esp3I	CGTCTC	1 cut(s)	117
FaeI	CATG	6 cut(s)	757, 1270, 1586, 1688, 1700, 1760
FalI	AAGNNNNNCTT	6 cut(s)	1192, 1224, 1227, 1259, 1715, 1747
FaqI	GGGAC	9 cut(s)	65, 130, 136, 142, 165, 196, 452, 1030, 1444
FatI	CATG	6 cut(s)	753, 1266, 1582, 1684, 1696, 1756
FauI	CCCGC	2 cut(s)	713, 1469
FauNDI	CATATG	1 cut(s)	1597
FblI	GTMKAC	2 cut(s)	660, 836
Fnu4HI	GCNGC	5 cut(s)	317, 1188, 1305, 1533, 1536
FokI	GGATG	8 cut(s)	85, 386, 515, 581, 1191, 1276, 1628, 1661
Fsp4HI	GCNGC	5 cut(s)	317, 1188, 1305, 1533, 1536
FspBI	CTAG	3 cut(s)	480, 620, 665
GlaI	GCGC	1 cut(s)	232
GluI	GCNGC	5 cut(s)	317, 1188, 1305, 1533, 1536
GsaI	CCCAGC	3 cut(s)	186, 249, 323
GsuI	CTGGAG	1 cut(s)	776
HaeII	RGCGCY	1 cut(s)	234
HaeIII	GGCC	3 cut(s)	302, 1114, 1316
HapII	CCGG	7 cut(s)	250, 284, 313, 353, 1048, 1216, 1771
HgaI	GACGC	1 cut(s)	1454
HhaI	GCGC	1 cut(s)	233
Hin1I	GRCGYC	1 cut(s)	129
Hin1II	CATG	6 cut(s)	757, 1270, 1586, 1688, 1700, 1760
Hin6I	GCGC	1 cut(s)	231
HinP1I	GCGC	1 cut(s)	231
HindIII	AAGCTT	1 cut(s)	1729
HinfI	GANTC	5 cut(s)	6, 421, 1055, 1263, 1457
HpaII	CCGG	7 cut(s)	250, 284, 313, 353, 1048, 1216, 1771
HphI	GGTGA	2 cut(s)	62, 104
Hpy166II	GTNNAC	4 cut(s)	608, 661, 805, 837
Hpy188I	TCNGA	6 cut(s)	733, 889, 1173, 1299, 1356, 1654
Hpy8I	GTNNAC	4 cut(s)	608, 661, 805, 837
Hpy99I	CGWCG	4 cut(s)	131, 134, 220, 283
HpyCH4III	ACNGT	3 cut(s)	179, 650, 751
HpyCH4IV	ACGT	2 cut(s)	54, 129
HpyF10VI	GCNNNNNNNGC	9 cut(s)	280, 289, 308, 313, 344, 1193, 1313, 1445, 1592
HpyF3I	CTNAG	5 cut(s)	730, 1053, 1191, 1323, 1727
HpySE526I	ACGT	2 cut(s)	54, 129
Hsp92I	GRCGYC	1 cut(s)	129
Hsp92II	CATG	6 cut(s)	757, 1270, 1586, 1688, 1700, 1760
HspAI	GCGC	1 cut(s)	231
Kpn2I	TCCGGA	1 cut(s)	1215
KroI	GCCGGC	1 cut(s)	283
KroNI	GCCGGC	1 cut(s)	285
Kzo9I	GATC	7 cut(s)	811, 965, 1087, 1212, 1283, 1471, 1567
LmnI	GCTCC	3 cut(s)	222, 1360, 1378
Lsp1109I	GCAGC	4 cut(s)	1199, 1291, 1522, 1544
LweI	GCATC	3 cut(s)	341, 625, 730
MaeI	CTAG	3 cut(s)	480, 620, 665
MaeII	ACGT	2 cut(s)	54, 129
MaeIII	GTNAC	2 cut(s)	415, 1226
MalI	GATC	7 cut(s)	813, 967, 1089, 1214, 1285, 1473, 1569
MboI	GATC	7 cut(s)	811, 965, 1087, 1212, 1283, 1471, 1567
MboII	GAAGA	5 cut(s)	656, 746, 757, 1518, 1652
MfeI	CAATTG	1 cut(s)	1629
MflI	RGATCY	3 cut(s)	811, 965, 1212
MhlI	GDGCHC	1 cut(s)	309
MluCI	AATT	5 cut(s)	853, 1062, 1219, 1629, 1748
MlyI	GAGTC	5 cut(s)	15, 430, 1064, 1257, 1466
MmeI	TCCRAC	1 cut(s)	907
Mph1103I	ATGCAT	1 cut(s)	640
MreI	CGCCGGCG	1 cut(s)	283
MroI	TCCGGA	1 cut(s)	1215
MroNI	GCCGGC	1 cut(s)	283
MroXI	GAANNNNTTC	1 cut(s)	709
MseI	TTAA	8 cut(s)	297, 501, 624, 816, 915, 1199, 1310, 1541
MslI	CAYNNNNRTG	2 cut(s)	1235, 1716
MspA1I	CMGCKG	1 cut(s)	1535
MspCI	CTTAAG	1 cut(s)	815
MspI	CCGG	7 cut(s)	250, 284, 313, 353, 1048, 1216, 1771
MspR9I	CCNGG	4 cut(s)	313, 794, 1048, 1772
MunI	CAATTG	1 cut(s)	1629
Mva1269I	GAATGC	1 cut(s)	1464
MvaI	CCWGG	1 cut(s)	794
MvnI	CGCG	1 cut(s)	220
MwoI	GCNNNNNNNGC	9 cut(s)	280, 289, 308, 313, 344, 1193, 1313, 1445, 1592
NaeI	GCCGGC	1 cut(s)	285
NciI	CCSGG	3 cut(s)	313, 1048, 1772
NdeI	CATATG	1 cut(s)	1597
NdeII	GATC	7 cut(s)	811, 965, 1087, 1212, 1283, 1471, 1567
NgoMIV	GCCGGC	1 cut(s)	283
NlaIII	CATG	6 cut(s)	757, 1270, 1586, 1688, 1700, 1760
NlaIV	GGNNCC	4 cut(s)	1046, 1167, 1214, 1380
NmuCI	GTSAC	1 cut(s)	1226
NsiI	ATGCAT	1 cut(s)	640
NspI	RCATGY	1 cut(s)	1586
NspV	TTCGAA	1 cut(s)	17
PaeR7I	CTCGAG	1 cut(s)	1556
PagI	TCATGA	1 cut(s)	1266
PctI	GAATGC	1 cut(s)	1464
PdiI	GCCGGC	1 cut(s)	285
PdmI	GAANNNNTTC	1 cut(s)	709
PflFI	GACNNNGTC	3 cut(s)	128, 1054, 1142
PflMI	CCANNNNNTGG	1 cut(s)	799
PfoI	TCCNGGA	1 cut(s)	1046
PkrI	GCNGC	5 cut(s)	318, 1189, 1306, 1534, 1537
PleI	GAGTC	5 cut(s)	14, 429, 1063, 1257, 1465
PpsI	GAGTC	5 cut(s)	14, 429, 1063, 1257, 1465
PpuMI	RGGWCCY	1 cut(s)	1165
Psp5II	RGGWCCY	1 cut(s)	1165
Psp6I	CCWGG	1 cut(s)	792
PspFI	CCCAGC	3 cut(s)	182, 245, 319
PspGI	CCWGG	1 cut(s)	792
PspN4I	GGNNCC	4 cut(s)	1046, 1167, 1214, 1380
PspPI	GGNCC	6 cut(s)	1044, 1113, 1165, 1314, 1423, 1667
PspPPI	RGGWCCY	1 cut(s)	1165
PspXI	VCTCGAGB	1 cut(s)	1556
PstNI	CAGNNNCTG	1 cut(s)	983
PsuI	RGATCY	3 cut(s)	811, 965, 1212
PsyI	GACNNNGTC	3 cut(s)	128, 1054, 1142
PvuII	CAGCTG	1 cut(s)	1535
RsaI	GTAC	3 cut(s)	485, 804, 976
RsaNI	GTAC	3 cut(s)	484, 803, 975
RseI	CAYNNNNRTG	2 cut(s)	1235, 1716
SaqAI	TTAA	8 cut(s)	297, 501, 624, 816, 915, 1199, 1310, 1541
SatI	GCNGC	5 cut(s)	317, 1188, 1305, 1533, 1536
Sau3AI	GATC	7 cut(s)	811, 965, 1087, 1212, 1283, 1471, 1567
Sau96I	GGNCC	6 cut(s)	1044, 1113, 1165, 1314, 1423, 1667
SchI	GAGTC	5 cut(s)	15, 430, 1064, 1257, 1466
ScrFI	CCNGG	4 cut(s)	313, 794, 1048, 1772
SduI	GDGCHC	1 cut(s)	309
SfaNI	GCATC	3 cut(s)	341, 625, 730
SfcI	CTRYAG	2 cut(s)	175, 1440
Sfr274I	CTCGAG	1 cut(s)	1556
SfuI	TTCGAA	1 cut(s)	17
SgrAI	CRCCGGYG	1 cut(s)	283
SinI	GGWCC	4 cut(s)	1044, 1165, 1423, 1667
SlaI	CTCGAG	1 cut(s)	1556
SmiMI	CAYNNNNRTG	2 cut(s)	1235, 1716
SmlI	CTYRAG	4 cut(s)	200, 601, 815, 1556
SmoI	CTYRAG	4 cut(s)	200, 601, 815, 1556
Sse9I	AATT	5 cut(s)	853, 1062, 1219, 1629, 1748
SsiI	CCGC	8 cut(s)	220, 259, 272, 316, 552, 720, 840, 1462
SspI	AATATT	1 cut(s)	1414
SspMI	CTAG	3 cut(s)	480, 620, 665
StyD4I	CCNGG	4 cut(s)	311, 792, 1046, 1770
StyI	CCWWGG	5 cut(s)	47, 408, 1109, 1208, 1735
TaaI	ACNGT	3 cut(s)	179, 650, 751
TaiI	ACGT	2 cut(s)	57, 132
TaqI	TCGA	7 cut(s)	17, 424, 451, 564, 1557, 1588, 1608
TaqII	GACCGA	2 cut(s)	1059, 1063
TasI	AATT	5 cut(s)	853, 1062, 1219, 1629, 1748
TatI	WGTACW	1 cut(s)	974
TauI	GCSGC	1 cut(s)	319
Tru1I	TTAA	8 cut(s)	297, 501, 624, 816, 915, 1199, 1310, 1541
Tru9I	TTAA	8 cut(s)	297, 501, 624, 816, 915, 1199, 1310, 1541
TscAI	CASTG	3 cut(s)	348, 655, 1720
TseFI	GTSAC	1 cut(s)	1226
TseI	GCWGC	4 cut(s)	1187, 1304, 1532, 1535
Tsp45I	GTSAC	1 cut(s)	1226
TspDTI	ATGAA	8 cut(s)	1116, 1283, 1356, 1466, 1470, 1538, 1614, 1673
TspGWI	ACGGA	2 cut(s)	267, 375
TspRI	CASTG	3 cut(s)	348, 655, 1720
Tth111I	GACNNNGTC	3 cut(s)	128, 1054, 1142
Van91I	CCANNNNNTGG	1 cut(s)	799
Vha464I	CTTAAG	1 cut(s)	815
VpaK11BI	GGWCC	4 cut(s)	1044, 1165, 1423, 1667
XagI	CCTNNNNNAGG	1 cut(s)	1298
XapI	RAATTY	2 cut(s)	853, 1062
XceI	RCATGY	1 cut(s)	1586
XhoI	CTCGAG	1 cut(s)	1556
XmiI	GTMKAC	2 cut(s)	660, 836
XmnI	GAANNNNTTC	1 cut(s)	709
XspI	CTAG	3 cut(s)	480, 620, 665
ZraI	GACGTC	1 cut(s)	130
Zsp2I	ATGCAT	1 cut(s)	640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.