Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003975

Physical Location & Seq

Genomic Coordinates Reverse (-)

14788335 .. 14794853

Gene Structure 6519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G008740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGGAACCTGCACCTCAAAACCACCAAAGCCAAACCCCTACGCCTCCAGAGACCCAAATGACCCATCTCACCCTTCCCAAACCCCCAAATCCATAACCCCCCACCACAATTCCAAAGACGACGCCGTTTCCGCCGCCAGACAGTCCCAGTCACAGTCCCAGTCGCCGTTCTTCCCCTTCTACAGCCCCAGCCCGGCCCATTACCTCAAGAAGTCCCCGGCGACGACCCGGAGCAAGAGCGCTGCCTCCACGCCCAGCCGGTTTTTCCGGCGACCCTTCCCGCCGCCGTCGCCGGCGAAGCACATTAAGGCCGTGCTGGCGCGGCGGCTGGGGAAAAAGGCGACGGCTTCGGTGGCGATACCGGAGGACGGTGAAGATGAGGATGGGGTTGATCTGGACAAGAGGTTTGGATTCTCCAAGGAGTTAACTAGTAGACTGGAGGTTGGGGATGAAGTGGGCCGAGGGCATTTTGGGTATACTTGCTCTGCTGTGTTCAAAAAGGGTGAGTTTAAGGGCCAGCAGGTAGCTGTTAAAGTCATCCCTAAAGCAAAGATGACAACTGCTATTGCAATTGAGGATGTGAGGAGGGAGGTCAAAATATTACGTGCCTTGACCGGACATACAAATCTAGTTCACTTCTATGATGCATTTGAAGACAGTGACAATGTCTACATAGTAATGGAGTTATGTGAAGGTGGGGAGCTTTTGGATAGAATACTTTCAAGGGGTGGAAAATACTCAGAGGATGATGCAAAGACTGTCATGGTTCAAATACTGAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGTGATCTTAAGCCAGAGAACTTTTTGTATACTGCTAAGGATGAGAGTTCGCCATTGAAAGCCATTGACTTTGGCCTATCAGATTTTGCCAAACCAGATGAGAGGCTTAATGATATTGTCGGAAGTGCATACTACGTGGCTCCTGAGGTTCTACATAGATCTTATAGTACAGAGGCTGATGTATGGAGTATAGGTGTAATAGCATATATTCTTTTATGTGGTAGTCGGCCATTTTGGGCTCGGACAGAGTCTGGAATTTTTCGGGCGGTCTTGAAAGCTGATCCCAGTTTTGATGAAGCACCTTGGCCTTCGTTATCTGTTGAAGCGAAGGACTTTGTCAAACGCTTATTAAATAAGGACCCTCGGAAGCGAATGACAGCTGCTCAAGCATTAAGTCATCCTTGGATGAGGAATTATAATGATGTAAAAGTGCCTCTTGATATTTTAATATTTAGACTCATGAAGATGTATATGCGATCGTCATCCCTTCGAAAGGCTGCTTTAAGGGCACTGTCTAAGACATTGACTGTGGAAGAACTCTATTATCTGAAGGAGCAGTTTGCACTATTAGTACCAAACAAGAATGGCACTATCACTCTTGACAATATTAGAATGGCCCTGATGAAAAATGCTACAGACGCAATGAAGGAGTCTCGCATTCCTGATCTTATTGCATCGCTAAATGCACTTCAATACAGAAGAATGGATTTTGAGGAGTTCTGTGCAGCTGCACTAAGTGTACATCAGCTTGAGGCACTTGATCGTTGGGAACAACACGCTCGATGTGCATATGAACTTTTTGAGAAGGATGGAAACAGGGCTATTGTCATTGAAGAACTTGCTTCAGAACTTGGGCTTGGTCCCTCCATTCCATTACATGTGGTTCTCCATGACTGGATTAGGCACACTGATGGGAAACTAAGCTTCCTTGGATTTGTAAAATTGTTGCACGGTGTGTCCAGCCGGACGTTTGTGAAGCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0004713 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018108 GO:0018193 GO:0018209 GO:0018212 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

599

Amino Acids

67.15

Weight (kDa)

8.93

Isoelectric Point (pI)

51.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	147 - 408	3e-72	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	147 - 401	9.1e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49580 AT3G19100
fragaria_vesca	FvH4_2g06730
malus_domestica	MD05G1075300.v1.1 MD10G1089900.v1.1
prunus_persica	Prupe.8G117200_v2.0.a1 Prupe.8G117200_v2.0.a1
pyrus_communis	pycom10g07340
rosa_chinensis	RchiOBHm_Chr6g0258891 RchiOBHm_Chr6g0258921
rosa_laevigata	RLG00000002771 RLG00000014571 RLG00000014574 RLG00000014576
rosa_multiflora	Rmu_co8233831.1_g000001 Rmu_sc0004347.1_g000001 Rmu_sc0004485.1_g000023 Rmu_sc0005290.1_g000002 Rmu_sc0009697.1_g000001
rosa_roxburghii	Rroxscaffold_7G00206150 Rroxscaffold_7G00206340
rosa_rugosa	Rorug05G0584400
rosa_samantha	Rh6AG100600 Rh6AG100700 Rh6BG091900 Rh6BG092300 Rh6BG092600 Rh6BG092700 Rh6CG089800 Rh6CG089900 Rh6DG084000 Rh6DG084100
rosa_wichuraiana	Rw6G008740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1233
Acc36I	ACCTGC	2 cut(s)	17, 511
AccI	GTMKAC	4 cut(s)	433, 476, 669, 845
AccII	CGCG	1 cut(s)	322
AciI	CCGC	7 cut(s)	132, 135, 281, 284, 322, 325, 1082
AclWI	GGATC	1 cut(s)	1091
AcoI	YGGCCR	1 cut(s)	1043
AcsI	RAATTY	1 cut(s)	1071
AcuI	CTGAAG	3 cut(s)	785, 1385, 1644
AcyI	GRCGYC	1 cut(s)	123
AdeI	CACNNNGTG	2 cut(s)	1553, 1771
AfaI	GTAC	3 cut(s)	985, 1389, 1557
AfeI	AGCGCT	1 cut(s)	241
AfiI	CCNNNNNNNGG	3 cut(s)	193, 368, 1309
AflII	CTTAAG	1 cut(s)	824
AflIII	ACRYGT	1 cut(s)	1693
AgsI	TTSAA	9 cut(s)	496, 653, 723, 770, 874, 1090, 1139, 1508, 1649
AhlI	ACTAGT	1 cut(s)	428
AjuI	GAANNNNNNNTTGG	2 cut(s)	1656, 1688
AluBI	AGCT	7 cut(s)	527, 703, 1094, 1196, 1544, 1564, 1740
AluI	AGCT	7 cut(s)	527, 703, 1094, 1196, 1544, 1564, 1740
Alw21I	GWGCWC	1 cut(s)	816
Alw26I	GTCTC	2 cut(s)	45, 1473
Alw44I	GTGCAC	1 cut(s)	812
AlwI	GGATC	1 cut(s)	1091
AlwNI	CAGNNNCTG	2 cut(s)	992, 1067
Aor51HI	AGCGCT	1 cut(s)	241
AoxI	GGCC	8 cut(s)	195, 309, 457, 514, 889, 1043, 1121, 1431
ApaLI	GTGCAC	1 cut(s)	812
ApeKI	GCWGC	5 cut(s)	242, 1196, 1313, 1541, 1544
ApoI	RAATTY	1 cut(s)	1071
ArsI	GACNNNNNNTTYG	2 cut(s)	389, 421
Asp700I	GAANNNNTTC	1 cut(s)	718
AspLEI	GCGC	2 cut(s)	242, 322
AspS9I	GGNCC	6 cut(s)	196, 457, 514, 1174, 1432, 1676
AsuC2I	CCSGG	3 cut(s)	194, 218, 229
AsuHPI	GGTGA	3 cut(s)	62, 383, 515
AsuII	TTCGAA	1 cut(s)	1306
AvaII	GGWCC	2 cut(s)	1174, 1676
AxyI	CCTNAGG	1 cut(s)	960
BaeGI	GKGCMC	2 cut(s)	816, 1327
BanII	GRGCYC	1 cut(s)	1057
BbsI	GAAGAC	1 cut(s)	660
Bbv12I	GWGCWC	1 cut(s)	816
BbvI	GCAGC	5 cut(s)	229, 1183, 1300, 1531, 1553
BccI	CCATC	4 cut(s)	73, 377, 1619, 1721
BceAI	ACGGC	5 cut(s)	110, 151, 271, 296, 360
BcnI	CCSGG	3 cut(s)	194, 218, 229
BcoDI	GTCTC	2 cut(s)	45, 1473
BcuI	ACTAGT	1 cut(s)	428
BfaI	CTAG	2 cut(s)	429, 629
BfmI	CTRYAG	2 cut(s)	181, 1449
BfoI	RGCGCY	1 cut(s)	243
BfrI	CTTAAG	1 cut(s)	824
BfuAI	ACCTGC	2 cut(s)	17, 511
BglI	GCCNNNNNGGC	1 cut(s)	317
BglII	AGATCT	1 cut(s)	974
BisI	GCNGC	9 cut(s)	135, 243, 284, 323, 326, 1197, 1314, 1542, 1545
BlsI	GCNGC	9 cut(s)	136, 244, 285, 324, 327, 1198, 1315, 1543, 1546
Bme1390I	CCNGG	3 cut(s)	194, 218, 229
Bme18I	GGWCC	2 cut(s)	1174, 1676
BmgT120I	GGNCC	6 cut(s)	196, 457, 514, 1174, 1432, 1676
BmiI	GGNNCC	4 cut(s)	7, 957, 1176, 1678
BmrFI	CCNGG	3 cut(s)	194, 218, 229
BmrI	ACTGGG	3 cut(s)	142, 154, 1095
BmsI	GCATC	3 cut(s)	634, 739, 1499
BmuI	ACTGGG	3 cut(s)	142, 154, 1095
BpiI	GAAGAC	1 cut(s)	660
BpmI	CTGGAG	2 cut(s)	31, 458
Bpu10I	CCTNAGC	1 cut(s)	852
Bpu14I	TTCGAA	1 cut(s)	1306
BpuEI	CTTGAG	3 cut(s)	191, 1185, 1586
BpuMI	CCSGG	3 cut(s)	194, 218, 229
BsaAI	YACGTR	2 cut(s)	605, 952
BsaBI	GATNNNNATC	1 cut(s)	1297
BsaHI	GRCGYC	1 cut(s)	123
BsaI	GGTCTC	1 cut(s)	45
BsaJI	CCNNGG	7 cut(s)	216, 417, 460, 1118, 1178, 1217, 1744
BsaWI	WCCGGW	2 cut(s)	361, 614
BsaXI	ACNNNNNCTCC	2 cut(s)	994, 1024
Bsc4I	CCNNNNNNNGG	3 cut(s)	193, 368, 1309
Bse118I	RCCGGY	2 cut(s)	258, 292
Bse1I	ACTGG	5 cut(s)	148, 160, 441, 1101, 1715
Bse21I	CCTNAGG	1 cut(s)	960
Bse3DI	GCAATG	1 cut(s)	1464
Bse8I	GATNNNNATC	1 cut(s)	1297
BseDI	CCNNGG	7 cut(s)	216, 417, 460, 1118, 1178, 1217, 1744
BseJI	GATNNNNATC	1 cut(s)	1297
BseLI	CCNNNNNNNGG	3 cut(s)	193, 368, 1309
BseMI	GCAATG	1 cut(s)	1464
BseMII	CTCAG	2 cut(s)	753, 951
BseNI	ACTGG	5 cut(s)	148, 160, 441, 1101, 1715
BseRI	GAGGAG	2 cut(s)	598, 1544
BseSI	GKGCMC	2 cut(s)	816, 1327
BseXI	GCAGC	5 cut(s)	229, 1183, 1300, 1531, 1553
BseYI	CCCAGC	3 cut(s)	188, 254, 328
BsgI	GTGCAG	2 cut(s)	1530, 1560
Bsh1236I	CGCG	1 cut(s)	322
Bsh1285I	CGRYCG	1 cut(s)	1295
BshFI	GGCC	8 cut(s)	197, 311, 459, 516, 891, 1045, 1123, 1433
BsiEI	CGRYCG	1 cut(s)	1295
BsiHKAI	GWGCWC	1 cut(s)	816
BsiSI	CCGG	9 cut(s)	194, 218, 229, 259, 268, 293, 362, 615, 1780
BslFI	GGGAC	4 cut(s)	130, 142, 199, 1662
BslI	CCNNNNNNNGG	3 cut(s)	193, 368, 1309
BsmAI	GTCTC	2 cut(s)	45, 1473
BsmFI	GGGAC	4 cut(s)	130, 142, 199, 1662
BsmI	GAATGC	1 cut(s)	1473
BsnI	GGCC	8 cut(s)	197, 311, 459, 516, 891, 1045, 1123, 1433
Bso31I	GGTCTC	1 cut(s)	45
Bsp119I	TTCGAA	1 cut(s)	1306
Bsp1286I	GDGCHC	3 cut(s)	816, 1057, 1327
Bsp1407I	TGTACA	1 cut(s)	1555
Bsp143I	GATC	7 cut(s)	391, 820, 974, 1096, 1292, 1480, 1576
BspACI	CCGC	7 cut(s)	132, 135, 281, 284, 322, 325, 1082
BspANI	GGCC	8 cut(s)	197, 311, 459, 516, 891, 1045, 1123, 1433
BspCNI	CTCAG	2 cut(s)	752, 952
BspFNI	CGCG	1 cut(s)	322
BspHI	TCATGA	1 cut(s)	1275
BspLI	GGNNCC	4 cut(s)	7, 957, 1176, 1678
BspMI	ACCTGC	2 cut(s)	17, 511
BspPI	GGATC	1 cut(s)	1091
BspT104I	TTCGAA	1 cut(s)	1306
BspTI	CTTAAG	1 cut(s)	824
BspTNI	GGTCTC	1 cut(s)	45
BsrDI	GCAATG	1 cut(s)	1464
BsrFI	RCCGGY	2 cut(s)	258, 292
BsrGI	TGTACA	1 cut(s)	1555
BsrI	ACTGG	5 cut(s)	148, 160, 441, 1101, 1715
BssAI	RCCGGY	2 cut(s)	258, 292
BssECI	CCNNGG	7 cut(s)	216, 417, 460, 1118, 1178, 1217, 1744
BssMI	GATC	7 cut(s)	391, 820, 974, 1096, 1292, 1480, 1576
BssNAI	GTATAC	2 cut(s)	477, 846
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	4 cut(s)	417, 1118, 1217, 1744
Bst1107I	GTATAC	2 cut(s)	477, 846
Bst4CI	ACNGT	9 cut(s)	144, 156, 371, 659, 760, 818, 1329, 1345, 1769
BstACI	GRCGYC	1 cut(s)	123
BstAFI	CTTAAG	1 cut(s)	824
BstAUI	TGTACA	1 cut(s)	1555
BstBAI	YACGTR	2 cut(s)	605, 952
BstBI	TTCGAA	1 cut(s)	1306
BstC8I	GCNNGC	3 cut(s)	294, 318, 518
BstDEI	CTNAG	7 cut(s)	739, 852, 960, 1332, 1550, 1736, 1797
BstENI	CCTNNNNNAGG	1 cut(s)	1307
BstFNI	CGCG	1 cut(s)	322
BstH2I	RGCGCY	1 cut(s)	243
BstHHI	GCGC	2 cut(s)	242, 322
BstKTI	GATC	7 cut(s)	394, 823, 977, 1099, 1295, 1483, 1579
BstMAI	GTCTC	2 cut(s)	45, 1473
BstMBI	GATC	7 cut(s)	391, 820, 974, 1096, 1292, 1480, 1576
BstMCI	CGRYCG	1 cut(s)	1295
BstNSI	RCATGY	1 cut(s)	1697
BstSCI	CCNGG	3 cut(s)	192, 216, 227
BstSFI	CTRYAG	2 cut(s)	181, 1449
BstSLI	GKGCMC	2 cut(s)	816, 1327
BstUI	CGCG	1 cut(s)	322
BstV1I	GCAGC	5 cut(s)	229, 1183, 1300, 1531, 1553
BstV2I	GAAGAC	1 cut(s)	660
BstX2I	RGATCY	1 cut(s)	974
BstYI	RGATCY	1 cut(s)	974
BstZ17I	GTATAC	2 cut(s)	477, 846
Bsu36I	CCTNAGG	1 cut(s)	960
BsuRI	GGCC	8 cut(s)	197, 311, 459, 516, 891, 1045, 1123, 1433
BtgZI	GCGATG	1 cut(s)	1476
BtsIMutI	CAGTG	3 cut(s)	664, 1325, 1722
BveI	ACCTGC	2 cut(s)	17, 511
Cac8I	GCNNGC	3 cut(s)	294, 318, 518
CaiI	CAGNNNCTG	2 cut(s)	992, 1067
CciI	TCATGA	1 cut(s)	1275
CfoI	GCGC	2 cut(s)	242, 322
Cfr10I	RCCGGY	2 cut(s)	258, 292
Cfr13I	GGNCC	6 cut(s)	196, 457, 514, 1174, 1432, 1676
CseI	GACGC	2 cut(s)	131, 1463
Csp6I	GTAC	3 cut(s)	984, 1388, 1556
CviAII	CATG	4 cut(s)	763, 1276, 1694, 1706
CviQI	GTAC	3 cut(s)	984, 1388, 1556
DdeI	CTNAG	7 cut(s)	739, 852, 960, 1332, 1550, 1736, 1797
DpnI	GATC	7 cut(s)	393, 822, 976, 1098, 1294, 1482, 1578
DpnII	GATC	7 cut(s)	391, 820, 974, 1096, 1292, 1480, 1576
DraIII	CACNNNGTG	2 cut(s)	1553, 1771
EaeI	YGGCCR	1 cut(s)	1043
EciI	GGCGGA	1 cut(s)	121
Eco130I	CCWWGG	4 cut(s)	417, 1118, 1217, 1744
Eco24I	GRGCYC	1 cut(s)	1057
Eco31I	GGTCTC	1 cut(s)	45
Eco47I	GGWCC	2 cut(s)	1174, 1676
Eco47III	AGCGCT	1 cut(s)	241
Eco57I	CTGAAG	3 cut(s)	785, 1385, 1644
Eco81I	CCTNAGG	1 cut(s)	960
EcoNI	CCTNNNNNAGG	1 cut(s)	1307
EcoO109I	RGGNCCY	1 cut(s)	1174
EcoT14I	CCWWGG	4 cut(s)	417, 1118, 1217, 1744
EcoT22I	ATGCAT	1 cut(s)	649
EcoT38I	GRGCYC	1 cut(s)	1057
ErhI	CCWWGG	4 cut(s)	417, 1118, 1217, 1744
FaeI	CATG	4 cut(s)	766, 1279, 1697, 1709
FalI	AAGNNNNNCTT	4 cut(s)	1201, 1233, 1236, 1268
FaqI	GGGAC	4 cut(s)	130, 142, 199, 1662
FatI	CATG	4 cut(s)	762, 1275, 1693, 1705
FauI	CCCGC	1 cut(s)	288
FauNDI	CATATG	1 cut(s)	1606
FblI	GTMKAC	4 cut(s)	433, 476, 669, 845
Fnu4HI	GCNGC	9 cut(s)	135, 243, 284, 323, 326, 1197, 1314, 1542, 1545
FriOI	GRGCYC	1 cut(s)	1057
Fsp4HI	GCNGC	9 cut(s)	135, 243, 284, 323, 326, 1197, 1314, 1542, 1545
FspBI	CTAG	2 cut(s)	429, 629
GlaI	GCGC	2 cut(s)	241, 321
GluI	GCNGC	9 cut(s)	135, 243, 284, 323, 326, 1197, 1314, 1542, 1545
GsaI	CCCAGC	3 cut(s)	192, 258, 332
GsuI	CTGGAG	2 cut(s)	31, 458
HaeII	RGCGCY	1 cut(s)	243
HaeIII	GGCC	8 cut(s)	197, 311, 459, 516, 891, 1045, 1123, 1433
HapII	CCGG	9 cut(s)	194, 218, 229, 259, 268, 293, 362, 615, 1780
HgaI	GACGC	2 cut(s)	131, 1463
HhaI	GCGC	2 cut(s)	242, 322
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	4 cut(s)	766, 1279, 1697, 1709
Hin6I	GCGC	2 cut(s)	240, 320
HinP1I	GCGC	2 cut(s)	240, 320
HincII	GTYRAC	1 cut(s)	426
HindII	GTYRAC	1 cut(s)	426
HindIII	AAGCTT	1 cut(s)	1738
HinfI	GANTC	4 cut(s)	411, 1064, 1272, 1466
HpaI	GTTAAC	1 cut(s)	426
HpaII	CCGG	9 cut(s)	194, 218, 229, 259, 268, 293, 362, 615, 1780
HphI	GGTGA	3 cut(s)	62, 383, 515
Hpy166II	GTNNAC	8 cut(s)	426, 434, 477, 634, 670, 814, 846, 1556
Hpy188I	TCNGA	7 cut(s)	742, 898, 938, 1059, 1182, 1365, 1663
Hpy8I	GTNNAC	8 cut(s)	426, 434, 477, 634, 670, 814, 846, 1556
Hpy99I	CGWCG	4 cut(s)	125, 226, 292, 346
HpyCH4III	ACNGT	9 cut(s)	144, 156, 371, 659, 760, 818, 1329, 1345, 1769
HpyCH4IV	ACGT	3 cut(s)	604, 951, 1784
HpyF3I	CTNAG	7 cut(s)	739, 852, 960, 1332, 1550, 1736, 1797
HpySE526I	ACGT	3 cut(s)	604, 951, 1784
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	4 cut(s)	766, 1279, 1697, 1709
HspAI	GCGC	2 cut(s)	240, 320
KroI	GCCGGC	1 cut(s)	292
KroNI	GCCGGC	1 cut(s)	294
KspAI	GTTAAC	1 cut(s)	426
Kzo9I	GATC	7 cut(s)	391, 820, 974, 1096, 1292, 1480, 1576
LmnI	GCTCC	4 cut(s)	231, 700, 961, 1369
Lsp1109I	GCAGC	5 cut(s)	229, 1183, 1300, 1531, 1553
LweI	GCATC	3 cut(s)	634, 739, 1499
MaeI	CTAG	2 cut(s)	429, 629
MaeII	ACGT	3 cut(s)	604, 951, 1784
MaeIII	GTNAC	2 cut(s)	150, 659
MalI	GATC	7 cut(s)	393, 822, 976, 1098, 1294, 1482, 1578
MboI	GATC	7 cut(s)	391, 820, 974, 1096, 1292, 1480, 1576
MboII	GAAGA	8 cut(s)	163, 386, 665, 791, 1291, 1361, 1527, 1661
MfeI	CAATTG	1 cut(s)	570
MflI	RGATCY	1 cut(s)	974
MhlI	GDGCHC	3 cut(s)	816, 1057, 1327
MluCI	AATT	5 cut(s)	109, 570, 1071, 1228, 1757
MlyI	GAGTC	3 cut(s)	1073, 1266, 1475
MmeI	TCCRAC	1 cut(s)	916
Mph1103I	ATGCAT	1 cut(s)	649
MreI	CGCCGGCG	1 cut(s)	292
MroNI	GCCGGC	1 cut(s)	292
MroXI	GAANNNNTTC	1 cut(s)	718
MslI	CAYNNNNRTG	4 cut(s)	639, 677, 1280, 1725
MspA1I	CMGCKG	2 cut(s)	1196, 1544
MspCI	CTTAAG	1 cut(s)	824
MspI	CCGG	9 cut(s)	194, 218, 229, 259, 268, 293, 362, 615, 1780
MspR9I	CCNGG	3 cut(s)	194, 218, 229
MunI	CAATTG	1 cut(s)	570
Mva1269I	GAATGC	1 cut(s)	1473
MvnI	CGCG	1 cut(s)	322
NaeI	GCCGGC	1 cut(s)	294
NciI	CCSGG	3 cut(s)	194, 218, 229
NdeI	CATATG	1 cut(s)	1606
NdeII	GATC	7 cut(s)	391, 820, 974, 1096, 1292, 1480, 1576
NgoMIV	GCCGGC	1 cut(s)	292
NlaIII	CATG	4 cut(s)	766, 1279, 1697, 1709
NlaIV	GGNNCC	4 cut(s)	7, 957, 1176, 1678
NmeAIII	GCCGAG	1 cut(s)	485
NmuCI	GTSAC	2 cut(s)	150, 659
NsiI	ATGCAT	1 cut(s)	649
NspI	RCATGY	1 cut(s)	1697
NspV	TTCGAA	1 cut(s)	1306
PagI	TCATGA	1 cut(s)	1275
PciI	ACATGT	1 cut(s)	1693
PctI	GAATGC	1 cut(s)	1473
PdiI	GCCGGC	1 cut(s)	294
PdmI	GAANNNNTTC	1 cut(s)	718
PfeI	GAWTC	1 cut(s)	411
PflFI	GACNNNGTC	3 cut(s)	665, 1063, 1151
PkrI	GCNGC	9 cut(s)	136, 244, 285, 324, 327, 1198, 1315, 1543, 1546
Ple19I	CGATCG	1 cut(s)	1295
PleI	GAGTC	3 cut(s)	1072, 1266, 1474
PpsI	GAGTC	3 cut(s)	1072, 1266, 1474
Ppu21I	YACGTR	2 cut(s)	605, 952
PpuMI	RGGWCCY	1 cut(s)	1174
PscI	ACATGT	1 cut(s)	1693
PsiI	TTATAA	1 cut(s)	1233
Psp5II	RGGWCCY	1 cut(s)	1174
PspFI	CCCAGC	3 cut(s)	188, 254, 328
PspN4I	GGNNCC	4 cut(s)	7, 957, 1176, 1678
PspPI	GGNCC	6 cut(s)	196, 457, 514, 1174, 1432, 1676
PspPPI	RGGWCCY	1 cut(s)	1174
PstNI	CAGNNNCTG	2 cut(s)	992, 1067
PsuI	RGATCY	1 cut(s)	974
PsyI	GACNNNGTC	3 cut(s)	665, 1063, 1151
PvuI	CGATCG	1 cut(s)	1295
PvuII	CAGCTG	2 cut(s)	1196, 1544
RsaI	GTAC	3 cut(s)	985, 1389, 1557
RsaNI	GTAC	3 cut(s)	984, 1388, 1556
RseI	CAYNNNNRTG	4 cut(s)	639, 677, 1280, 1725
SatI	GCNGC	9 cut(s)	135, 243, 284, 323, 326, 1197, 1314, 1542, 1545
Sau3AI	GATC	7 cut(s)	391, 820, 974, 1096, 1292, 1480, 1576
Sau96I	GGNCC	6 cut(s)	196, 457, 514, 1174, 1432, 1676
SchI	GAGTC	3 cut(s)	1073, 1266, 1475
ScrFI	CCNGG	3 cut(s)	194, 218, 229
SduI	GDGCHC	3 cut(s)	816, 1057, 1327
SfaNI	GCATC	3 cut(s)	634, 739, 1499
SfcI	CTRYAG	2 cut(s)	181, 1449
SfuI	TTCGAA	1 cut(s)	1306
SgrAI	CRCCGGYG	1 cut(s)	292
SinI	GGWCC	2 cut(s)	1174, 1676
SmiMI	CAYNNNNRTG	4 cut(s)	639, 677, 1280, 1725
SmlI	CTYRAG	4 cut(s)	206, 824, 1200, 1565
SmoI	CTYRAG	4 cut(s)	206, 824, 1200, 1565
SpeI	ACTAGT	1 cut(s)	428
Sse9I	AATT	5 cut(s)	109, 570, 1071, 1228, 1757
SsiI	CCGC	7 cut(s)	132, 135, 281, 284, 322, 325, 1082
SspI	AATATT	3 cut(s)	600, 1266, 1423
SspMI	CTAG	2 cut(s)	429, 629
StyD4I	CCNGG	3 cut(s)	192, 216, 227
StyI	CCWWGG	4 cut(s)	417, 1118, 1217, 1744
TaaI	ACNGT	9 cut(s)	144, 156, 371, 659, 760, 818, 1329, 1345, 1769
TaiI	ACGT	3 cut(s)	607, 954, 1787
TaqI	TCGA	2 cut(s)	1306, 1597
TasI	AATT	5 cut(s)	109, 570, 1071, 1228, 1757
TatI	WGTACW	2 cut(s)	983, 1555
TauI	GCSGC	4 cut(s)	137, 286, 325, 328
TfiI	GAWTC	1 cut(s)	411
TscAI	CASTG	3 cut(s)	664, 1332, 1729
TseFI	GTSAC	2 cut(s)	150, 659
TseI	GCWGC	5 cut(s)	242, 1196, 1313, 1541, 1544
Tsp45I	GTSAC	2 cut(s)	150, 659
TspDTI	ATGAA	6 cut(s)	465, 1125, 1292, 1454, 1475, 1623
TspRI	CASTG	3 cut(s)	664, 1332, 1729
Tth111I	GACNNNGTC	3 cut(s)	665, 1063, 1151
Vha464I	CTTAAG	1 cut(s)	824
VneI	GTGCAC	1 cut(s)	812
VpaK11BI	GGWCC	2 cut(s)	1174, 1676
XagI	CCTNNNNNAGG	1 cut(s)	1307
XapI	RAATTY	1 cut(s)	1071
XceI	RCATGY	1 cut(s)	1697
XmiI	GTMKAC	4 cut(s)	433, 476, 669, 845
XmnI	GAANNNNTTC	1 cut(s)	718
XspI	CTAG	2 cut(s)	429, 629
Zsp2I	ATGCAT	1 cut(s)	649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.