Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0003975

Physical Location & Seq

Genomic Coordinates Forward (+)

54908326 .. 54914155

Gene Structure 5830 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014571

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGGAACCTGCACCTCAAAACCACCAAAGCCAAACCCCTACTCCTCCAGAGACCCAAATGACCCATCTGACCCTTCCCAGACCCCCAAATCCCTACCCTCCATAACCCCCCACCACAATTCCAAAGACGACGCCGTTTCCGGCGCCAGACAGTCACAGTCCCAGTCCCAGTCGCCGTTCTTCCCGTTCTATAGCCCCAGCCCGGCCCATTACCTCAAGAAGTCTCCGGCGACGACCCGGAGCAAGAGCGCTGCCTCCACGCCCAGCCGGTTTTTCCGGCGACCCTTCCCGCCGCCGTCGCCGGCGAAGCACATTAAGGCCGTGCTGGCGCGGCGGCTGGGGAAGAAGGCGACGGCGTCGGTGGCGATACCGGAGGACGGTGAAGATGAGGATGGGGTTGATCTGGACAAGAGGTTTGGGTTCTCAAAGGAGTTAACCAGTAGATTGGAGGTTGGGGATGAAGTGGGCCGAGGGCATTTTGGGTATACTTGCTCTGCTGTGTTCAAAAAGGGTGAGTTTAAGGGCCAGCAGGTAGCTGTTAAAGTCATCCCTAAAGCAAAGATGACAACTGCTATTGCAATTGAGGATGTGAGAAGGGAGGTCAAAATATTACGTGCCTTGACTGGACATACAAACCTAGTTCAGTTCTATGATGCATTTGAAGACAGTGATAATGTCTACATAGTAATGGAGTTGTGTGAAGGTGGGGAGCTTTTGGATAGAATACTTTCAAGGGGTGGAAAATACTCAGAGGATGATGCAAAGACTGTCATGGTTCAAATACTGAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGTGATCTTAAGCCAGAGAACTTTTTGTATACTGCTAAGGATGAGAGTTCGCCATTGAAAGCCATTGACTTTGGCCTATCAGATTTTGCCAAACCAGATGAGAGGCTTAATGATATTGTTGGAAGTGCATACTATGTGGCTCCTGAGGTTCTACATAGATCTTATAGTACAGAGGCTGATGTATGGAGTATAGGTGTAATAGCATATATTCTTTTATGTGGTAGTCGGCCATTTTGGGCTCGGACAGAGTCTGGAATTTTTCGGGCGGTCTTGAAAGCTGATCCCAGTTTTGATGAAGCACCTTGGCCTTCATTATCTGTTGAAGCAAAGGACTTTGTCAAACGCTTATTAAATAAGGACCCTCGGAAGCGAATGACAGCTGCTCAAGCATTAAGTCATCCTTGGATGAGGCATTATAATGATGTAAAAGTGCCTCTTGATATTTTAATATTTAGACTCATGAAGATGTATATGCGATCGTCATCCCTTCGAAAGGCTGCTTTAAGGGCACTGTCTAAGACATTGACTGTGGAAGAACTCTTTTATCTGAAGGAGCAGTTTGCACTATTAGTACCAAACAAGAATGGCACTATCACTCTTGACAATATTAGAATGGCCGTAATGAAAAATGCTACAGACGCAATGAAGGAGTCTCGCATTCCTGATCTTATTGCATCGCTAAATGCACTTCAATACAGAAGAATGGATTTTGAGGAGTTCTGTGCAGCTGCACTAAGTGTACATCAGCTTGAGGCACTTGATCGTTGGGAACAACATGCTCGATGTGCATATGAACTTTTCGAGAAGGATGGAAACAGGGCCATTGTCATTGAAGAACTTGCTTCAGAACTTGGGCTTGGCCCCTCCATTCCATTACATGTGGTTCTCCATGACTGGATTAGGCACACTGATGGGAAACTAAGCTTCCTTGGATTTGTAAAATTGTTGCACGGTGTGTCCAGCCGGACGTTTGTGAAGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0004713 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018108 GO:0018193 GO:0018209 GO:0018212 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

603

Amino Acids

67.38

Weight (kDa)

8.86

Isoelectric Point (pI)

53.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	150 - 411	2.1e-72	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	150 - 404	5.2e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49580 AT3G19100
fragaria_vesca	FvH4_2g06730
malus_domestica	MD05G1075300.v1.1 MD10G1089900.v1.1
prunus_persica	Prupe.8G117200_v2.0.a1 Prupe.8G117200_v2.0.a1
pyrus_communis	pycom10g07340
rosa_chinensis	RchiOBHm_Chr6g0258891 RchiOBHm_Chr6g0258921
rosa_laevigata	RLG00000002771 RLG00000014571 RLG00000014574 RLG00000014576
rosa_multiflora	Rmu_co8233831.1_g000001 Rmu_sc0004347.1_g000001 Rmu_sc0004485.1_g000023 Rmu_sc0005290.1_g000002 Rmu_sc0009697.1_g000001
rosa_roxburghii	Rroxscaffold_7G00206150 Rroxscaffold_7G00206340
rosa_rugosa	Rorug05G0584400
rosa_samantha	Rh6AG100600 Rh6AG100700 Rh6BG091900 Rh6BG092300 Rh6BG092600 Rh6BG092700 Rh6CG089800 Rh6CG089900 Rh6DG084000 Rh6DG084100
rosa_wichuraiana	Rw6G008740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1242
Acc36I	ACCTGC	2 cut(s)	17, 520
AccB1I	GGYRCC	1 cut(s)	143
AccI	GTMKAC	3 cut(s)	485, 678, 854
AccII	CGCG	1 cut(s)	331
AciI	CCGC	5 cut(s)	290, 293, 331, 334, 1091
AclWI	GGATC	1 cut(s)	1100
AcoI	YGGCCR	2 cut(s)	1052, 1440
AcsI	RAATTY	1 cut(s)	1080
AcuI	CTGAAG	3 cut(s)	794, 1394, 1653
AcyI	GRCGYC	3 cut(s)	132, 144, 356
AdeI	CACNNNGTG	2 cut(s)	1562, 1780
AfaI	GTAC	3 cut(s)	994, 1398, 1566
AfeI	AGCGCT	1 cut(s)	250
AfiI	CCNNNNNNNGG	3 cut(s)	202, 377, 1318
AflII	CTTAAG	1 cut(s)	833
AflIII	ACRYGT	1 cut(s)	1702
AgsI	TTSAA	9 cut(s)	505, 662, 732, 779, 883, 1099, 1148, 1517, 1658
AjuI	GAANNNNNNNTTGG	2 cut(s)	1665, 1697
AluBI	AGCT	7 cut(s)	536, 712, 1103, 1205, 1553, 1573, 1749
AluI	AGCT	7 cut(s)	536, 712, 1103, 1205, 1553, 1573, 1749
Alw21I	GWGCWC	1 cut(s)	825
Alw26I	GTCTC	3 cut(s)	45, 228, 1482
Alw44I	GTGCAC	1 cut(s)	821
AlwI	GGATC	1 cut(s)	1100
AlwNI	CAGNNNCTG	2 cut(s)	1001, 1076
Aor51HI	AGCGCT	1 cut(s)	250
ApaLI	GTGCAC	1 cut(s)	821
ApeKI	GCWGC	5 cut(s)	251, 1205, 1322, 1550, 1553
ApoI	RAATTY	1 cut(s)	1080
ArsI	GACNNNNNNTTYG	2 cut(s)	398, 430
Asp700I	GAANNNNTTC	1 cut(s)	727
AspLEI	GCGC	3 cut(s)	146, 251, 331
AspS9I	GGNCC	6 cut(s)	205, 466, 523, 1183, 1644, 1685
AsuC2I	CCSGG	2 cut(s)	203, 238
AsuHPI	GGTGA	2 cut(s)	392, 524
AsuII	TTCGAA	1 cut(s)	1315
AvaII	GGWCC	1 cut(s)	1183
AxyI	CCTNAGG	1 cut(s)	969
BaeGI	GKGCMC	2 cut(s)	825, 1336
BanI	GGYRCC	1 cut(s)	143
BanII	GRGCYC	1 cut(s)	1066
BbsI	GAAGAC	1 cut(s)	669
Bbv12I	GWGCWC	1 cut(s)	825
BbvI	GCAGC	5 cut(s)	238, 1192, 1309, 1540, 1562
BccI	CCATC	4 cut(s)	73, 386, 1628, 1730
BceAI	ACGGC	6 cut(s)	119, 160, 280, 305, 369, 1427
BcnI	CCSGG	2 cut(s)	203, 238
BcoDI	GTCTC	3 cut(s)	45, 228, 1482
BfaI	CTAG	1 cut(s)	638
BfmI	CTRYAG	2 cut(s)	190, 1458
BfoI	RGCGCY	2 cut(s)	147, 252
BfrI	CTTAAG	1 cut(s)	833
BfuAI	ACCTGC	2 cut(s)	17, 520
BglI	GCCNNNNNGGC	1 cut(s)	326
BglII	AGATCT	1 cut(s)	983
BisI	GCNGC	8 cut(s)	252, 293, 332, 335, 1206, 1323, 1551, 1554
BlsI	GCNGC	8 cut(s)	253, 294, 333, 336, 1207, 1324, 1552, 1555
Bme1390I	CCNGG	2 cut(s)	203, 238
Bme18I	GGWCC	1 cut(s)	1183
BmgT120I	GGNCC	6 cut(s)	205, 466, 523, 1183, 1644, 1685
BmiI	GGNNCC	5 cut(s)	7, 145, 966, 1185, 1687
BmrFI	CCNGG	2 cut(s)	203, 238
BmrI	ACTGGG	3 cut(s)	157, 163, 1104
BmsI	GCATC	3 cut(s)	643, 748, 1508
BmuI	ACTGGG	3 cut(s)	157, 163, 1104
BpiI	GAAGAC	1 cut(s)	669
BpmI	CTGGAG	1 cut(s)	31
Bpu10I	CCTNAGC	1 cut(s)	861
Bpu14I	TTCGAA	1 cut(s)	1315
BpuEI	CTTGAG	3 cut(s)	200, 1194, 1595
BpuMI	CCSGG	2 cut(s)	203, 238
BsaAI	YACGTR	1 cut(s)	614
BsaBI	GATNNNNATC	1 cut(s)	1306
BsaHI	GRCGYC	3 cut(s)	132, 144, 356
BsaI	GGTCTC	1 cut(s)	45
BsaJI	CCNNGG	5 cut(s)	469, 1127, 1187, 1226, 1753
BsaWI	WCCGGW	1 cut(s)	370
BsaXI	ACNNNNNCTCC	4 cut(s)	26, 56, 1003, 1033
Bsc4I	CCNNNNNNNGG	3 cut(s)	202, 377, 1318
Bse118I	RCCGGY	2 cut(s)	267, 301
Bse1I	ACTGG	6 cut(s)	163, 169, 438, 628, 1110, 1724
Bse21I	CCTNAGG	1 cut(s)	969
Bse3DI	GCAATG	1 cut(s)	1473
Bse8I	GATNNNNATC	1 cut(s)	1306
BseDI	CCNNGG	5 cut(s)	469, 1127, 1187, 1226, 1753
BseJI	GATNNNNATC	1 cut(s)	1306
BseLI	CCNNNNNNNGG	3 cut(s)	202, 377, 1318
BseMI	GCAATG	1 cut(s)	1473
BseMII	CTCAG	2 cut(s)	762, 960
BseNI	ACTGG	6 cut(s)	163, 169, 438, 628, 1110, 1724
BseRI	GAGGAG	2 cut(s)	34, 1553
BseSI	GKGCMC	2 cut(s)	825, 1336
BseXI	GCAGC	5 cut(s)	238, 1192, 1309, 1540, 1562
BseYI	CCCAGC	3 cut(s)	197, 263, 337
BsgI	GTGCAG	2 cut(s)	1539, 1569
Bsh1236I	CGCG	1 cut(s)	331
Bsh1285I	CGRYCG	1 cut(s)	1304
BshNI	GGYRCC	1 cut(s)	143
BsiEI	CGRYCG	1 cut(s)	1304
BsiHKAI	GWGCWC	1 cut(s)	825
BsiSI	CCGG	9 cut(s)	141, 203, 227, 238, 268, 277, 302, 371, 1789
BslFI	GGGAC	2 cut(s)	145, 151
BslI	CCNNNNNNNGG	3 cut(s)	202, 377, 1318
BsmAI	GTCTC	3 cut(s)	45, 228, 1482
BsmFI	GGGAC	2 cut(s)	145, 151
BsmI	GAATGC	1 cut(s)	1482
Bso31I	GGTCTC	1 cut(s)	45
Bsp119I	TTCGAA	1 cut(s)	1315
Bsp1286I	GDGCHC	3 cut(s)	825, 1066, 1336
Bsp1407I	TGTACA	1 cut(s)	1564
Bsp143I	GATC	7 cut(s)	400, 829, 983, 1105, 1301, 1489, 1585
BspACI	CCGC	5 cut(s)	290, 293, 331, 334, 1091
BspCNI	CTCAG	2 cut(s)	761, 961
BspFNI	CGCG	1 cut(s)	331
BspHI	TCATGA	1 cut(s)	1284
BspLI	GGNNCC	5 cut(s)	7, 145, 966, 1185, 1687
BspMI	ACCTGC	2 cut(s)	17, 520
BspPI	GGATC	1 cut(s)	1100
BspT104I	TTCGAA	1 cut(s)	1315
BspT107I	GGYRCC	1 cut(s)	143
BspTI	CTTAAG	1 cut(s)	833
BspTNI	GGTCTC	1 cut(s)	45
BsrDI	GCAATG	1 cut(s)	1473
BsrFI	RCCGGY	2 cut(s)	267, 301
BsrGI	TGTACA	1 cut(s)	1564
BsrI	ACTGG	6 cut(s)	163, 169, 438, 628, 1110, 1724
BssAI	RCCGGY	2 cut(s)	267, 301
BssECI	CCNNGG	5 cut(s)	469, 1127, 1187, 1226, 1753
BssMI	GATC	7 cut(s)	400, 829, 983, 1105, 1301, 1489, 1585
BssNAI	GTATAC	2 cut(s)	486, 855
BssNI	GRCGYC	3 cut(s)	132, 144, 356
BssT1I	CCWWGG	3 cut(s)	1127, 1226, 1753
Bst1107I	GTATAC	2 cut(s)	486, 855
Bst4CI	ACNGT	9 cut(s)	153, 159, 380, 668, 769, 827, 1338, 1354, 1778
BstACI	GRCGYC	3 cut(s)	132, 144, 356
BstAFI	CTTAAG	1 cut(s)	833
BstAUI	TGTACA	1 cut(s)	1564
BstBAI	YACGTR	1 cut(s)	614
BstBI	TTCGAA	1 cut(s)	1315
BstC8I	GCNNGC	3 cut(s)	303, 327, 527
BstDEI	CTNAG	7 cut(s)	748, 861, 969, 1341, 1559, 1745, 1806
BstENI	CCTNNNNNAGG	1 cut(s)	1316
BstFNI	CGCG	1 cut(s)	331
BstH2I	RGCGCY	2 cut(s)	147, 252
BstHHI	GCGC	3 cut(s)	146, 251, 331
BstKTI	GATC	7 cut(s)	403, 832, 986, 1108, 1304, 1492, 1588
BstMAI	GTCTC	3 cut(s)	45, 228, 1482
BstMBI	GATC	7 cut(s)	400, 829, 983, 1105, 1301, 1489, 1585
BstMCI	CGRYCG	1 cut(s)	1304
BstMWI	GCNNNNNNNGC	9 cut(s)	298, 307, 326, 331, 362, 1211, 1331, 1463, 1610
BstNSI	RCATGY	2 cut(s)	1604, 1706
BstSCI	CCNGG	2 cut(s)	201, 236
BstSFI	CTRYAG	2 cut(s)	190, 1458
BstSLI	GKGCMC	2 cut(s)	825, 1336
BstUI	CGCG	1 cut(s)	331
BstV1I	GCAGC	5 cut(s)	238, 1192, 1309, 1540, 1562
BstV2I	GAAGAC	1 cut(s)	669
BstX2I	RGATCY	1 cut(s)	983
BstXI	CCANNNNNNTGG	1 cut(s)	445
BstYI	RGATCY	1 cut(s)	983
BstZ17I	GTATAC	2 cut(s)	486, 855
Bsu36I	CCTNAGG	1 cut(s)	969
BtgZI	GCGATG	1 cut(s)	1485
BtsIMutI	CAGTG	3 cut(s)	673, 1334, 1731
BveI	ACCTGC	2 cut(s)	17, 520
Cac8I	GCNNGC	3 cut(s)	303, 327, 527
CaiI	CAGNNNCTG	2 cut(s)	1001, 1076
CciI	TCATGA	1 cut(s)	1284
CfoI	GCGC	3 cut(s)	146, 251, 331
Cfr10I	RCCGGY	2 cut(s)	267, 301
Cfr13I	GGNCC	6 cut(s)	205, 466, 523, 1183, 1644, 1685
CseI	GACGC	3 cut(s)	140, 345, 1472
Csp6I	GTAC	3 cut(s)	993, 1397, 1565
CviAII	CATG	5 cut(s)	772, 1285, 1601, 1703, 1715
CviQI	GTAC	3 cut(s)	993, 1397, 1565
DdeI	CTNAG	7 cut(s)	748, 861, 969, 1341, 1559, 1745, 1806
DinI	GGCGCC	1 cut(s)	145
DpnI	GATC	7 cut(s)	402, 831, 985, 1107, 1303, 1491, 1587
DpnII	GATC	7 cut(s)	400, 829, 983, 1105, 1301, 1489, 1585
DraIII	CACNNNGTG	2 cut(s)	1562, 1780
EaeI	YGGCCR	2 cut(s)	1052, 1440
Eco130I	CCWWGG	3 cut(s)	1127, 1226, 1753
Eco24I	GRGCYC	1 cut(s)	1066
Eco31I	GGTCTC	1 cut(s)	45
Eco47I	GGWCC	1 cut(s)	1183
Eco47III	AGCGCT	1 cut(s)	250
Eco57I	CTGAAG	3 cut(s)	794, 1394, 1653
Eco81I	CCTNAGG	1 cut(s)	969
EcoNI	CCTNNNNNAGG	1 cut(s)	1316
EcoO109I	RGGNCCY	1 cut(s)	1183
EcoT14I	CCWWGG	3 cut(s)	1127, 1226, 1753
EcoT22I	ATGCAT	1 cut(s)	658
EcoT38I	GRGCYC	1 cut(s)	1066
EgeI	GGCGCC	1 cut(s)	145
EheI	GGCGCC	1 cut(s)	145
ErhI	CCWWGG	3 cut(s)	1127, 1226, 1753
FaeI	CATG	5 cut(s)	775, 1288, 1604, 1706, 1718
FalI	AAGNNNNNCTT	4 cut(s)	1210, 1242, 1245, 1277
FaqI	GGGAC	2 cut(s)	145, 151
FatI	CATG	5 cut(s)	771, 1284, 1600, 1702, 1714
FauI	CCCGC	1 cut(s)	297
FauNDI	CATATG	1 cut(s)	1615
FblI	GTMKAC	3 cut(s)	485, 678, 854
Fnu4HI	GCNGC	8 cut(s)	252, 293, 332, 335, 1206, 1323, 1551, 1554
FriOI	GRGCYC	1 cut(s)	1066
Fsp4HI	GCNGC	8 cut(s)	252, 293, 332, 335, 1206, 1323, 1551, 1554
FspBI	CTAG	1 cut(s)	638
GlaI	GCGC	3 cut(s)	145, 250, 330
GluI	GCNGC	8 cut(s)	252, 293, 332, 335, 1206, 1323, 1551, 1554
GsaI	CCCAGC	3 cut(s)	201, 267, 341
GsuI	CTGGAG	1 cut(s)	31
HaeII	RGCGCY	2 cut(s)	147, 252
HapII	CCGG	9 cut(s)	141, 203, 227, 238, 268, 277, 302, 371, 1789
HgaI	GACGC	3 cut(s)	140, 345, 1472
HhaI	GCGC	3 cut(s)	146, 251, 331
Hin1I	GRCGYC	3 cut(s)	132, 144, 356
Hin1II	CATG	5 cut(s)	775, 1288, 1604, 1706, 1718
Hin6I	GCGC	3 cut(s)	144, 249, 329
HinP1I	GCGC	3 cut(s)	144, 249, 329
HincII	GTYRAC	1 cut(s)	435
HindII	GTYRAC	1 cut(s)	435
HindIII	AAGCTT	1 cut(s)	1747
HinfI	GANTC	3 cut(s)	1073, 1281, 1475
HpaI	GTTAAC	1 cut(s)	435
HpaII	CCGG	9 cut(s)	141, 203, 227, 238, 268, 277, 302, 371, 1789
HphI	GGTGA	2 cut(s)	392, 524
Hpy166II	GTNNAC	6 cut(s)	435, 486, 679, 823, 855, 1565
Hpy188I	TCNGA	7 cut(s)	70, 751, 907, 1068, 1191, 1374, 1672
Hpy8I	GTNNAC	6 cut(s)	435, 486, 679, 823, 855, 1565
Hpy99I	CGWCG	5 cut(s)	134, 235, 301, 355, 361
HpyCH4III	ACNGT	9 cut(s)	153, 159, 380, 668, 769, 827, 1338, 1354, 1778
HpyCH4IV	ACGT	2 cut(s)	613, 1793
HpyF10VI	GCNNNNNNNGC	9 cut(s)	298, 307, 326, 331, 362, 1211, 1331, 1463, 1610
HpyF3I	CTNAG	7 cut(s)	748, 861, 969, 1341, 1559, 1745, 1806
HpySE526I	ACGT	2 cut(s)	613, 1793
Hsp92I	GRCGYC	3 cut(s)	132, 144, 356
Hsp92II	CATG	5 cut(s)	775, 1288, 1604, 1706, 1718
HspAI	GCGC	3 cut(s)	144, 249, 329
KasI	GGCGCC	1 cut(s)	143
KroI	GCCGGC	1 cut(s)	301
KroNI	GCCGGC	1 cut(s)	303
KspAI	GTTAAC	1 cut(s)	435
Kzo9I	GATC	7 cut(s)	400, 829, 983, 1105, 1301, 1489, 1585
LmnI	GCTCC	4 cut(s)	240, 709, 970, 1378
Lsp1109I	GCAGC	5 cut(s)	238, 1192, 1309, 1540, 1562
LweI	GCATC	3 cut(s)	643, 748, 1508
MaeI	CTAG	1 cut(s)	638
MaeII	ACGT	2 cut(s)	613, 1793
MaeIII	GTNAC	1 cut(s)	153
MalI	GATC	7 cut(s)	402, 831, 985, 1107, 1303, 1491, 1587
MboI	GATC	7 cut(s)	400, 829, 983, 1105, 1301, 1489, 1585
MboII	GAAGA	9 cut(s)	172, 355, 395, 674, 800, 1300, 1370, 1536, 1670
MfeI	CAATTG	1 cut(s)	579
MflI	RGATCY	1 cut(s)	983
MhlI	GDGCHC	3 cut(s)	825, 1066, 1336
MluCI	AATT	4 cut(s)	118, 579, 1080, 1766
Mly113I	GGCGCC	1 cut(s)	144
MlyI	GAGTC	3 cut(s)	1082, 1275, 1484
MmeI	TCCRAC	1 cut(s)	925
Mph1103I	ATGCAT	1 cut(s)	658
MreI	CGCCGGCG	1 cut(s)	301
MroNI	GCCGGC	1 cut(s)	301
MroXI	GAANNNNTTC	1 cut(s)	727
MslI	CAYNNNNRTG	4 cut(s)	686, 1242, 1289, 1734
MspA1I	CMGCKG	2 cut(s)	1205, 1553
MspCI	CTTAAG	1 cut(s)	833
MspI	CCGG	9 cut(s)	141, 203, 227, 238, 268, 277, 302, 371, 1789
MspR9I	CCNGG	2 cut(s)	203, 238
MunI	CAATTG	1 cut(s)	579
Mva1269I	GAATGC	1 cut(s)	1482
MvnI	CGCG	1 cut(s)	331
MwoI	GCNNNNNNNGC	9 cut(s)	298, 307, 326, 331, 362, 1211, 1331, 1463, 1610
NaeI	GCCGGC	1 cut(s)	303
NarI	GGCGCC	1 cut(s)	144
NciI	CCSGG	2 cut(s)	203, 238
NdeI	CATATG	1 cut(s)	1615
NdeII	GATC	7 cut(s)	400, 829, 983, 1105, 1301, 1489, 1585
NgoMIV	GCCGGC	1 cut(s)	301
NlaIII	CATG	5 cut(s)	775, 1288, 1604, 1706, 1718
NlaIV	GGNNCC	5 cut(s)	7, 145, 966, 1185, 1687
NmeAIII	GCCGAG	1 cut(s)	494
NmuCI	GTSAC	1 cut(s)	153
NsiI	ATGCAT	1 cut(s)	658
NspI	RCATGY	2 cut(s)	1604, 1706
NspV	TTCGAA	1 cut(s)	1315
PagI	TCATGA	1 cut(s)	1284
PciI	ACATGT	1 cut(s)	1702
PctI	GAATGC	1 cut(s)	1482
PdiI	GCCGGC	1 cut(s)	303
PdmI	GAANNNNTTC	1 cut(s)	727
PflFI	GACNNNGTC	3 cut(s)	355, 1072, 1160
PkrI	GCNGC	8 cut(s)	253, 294, 333, 336, 1207, 1324, 1552, 1555
Ple19I	CGATCG	1 cut(s)	1304
PleI	GAGTC	3 cut(s)	1081, 1275, 1483
PluTI	GGCGCC	1 cut(s)	147
PpsI	GAGTC	3 cut(s)	1081, 1275, 1483
Ppu21I	YACGTR	1 cut(s)	614
PpuMI	RGGWCCY	1 cut(s)	1183
PscI	ACATGT	1 cut(s)	1702
PsiI	TTATAA	1 cut(s)	1242
Psp5II	RGGWCCY	1 cut(s)	1183
PspFI	CCCAGC	3 cut(s)	197, 263, 337
PspN4I	GGNNCC	5 cut(s)	7, 145, 966, 1185, 1687
PspPI	GGNCC	6 cut(s)	205, 466, 523, 1183, 1644, 1685
PspPPI	RGGWCCY	1 cut(s)	1183
PstNI	CAGNNNCTG	2 cut(s)	1001, 1076
PsuI	RGATCY	1 cut(s)	983
PsyI	GACNNNGTC	3 cut(s)	355, 1072, 1160
PvuI	CGATCG	1 cut(s)	1304
PvuII	CAGCTG	2 cut(s)	1205, 1553
RsaI	GTAC	3 cut(s)	994, 1398, 1566
RsaNI	GTAC	3 cut(s)	993, 1397, 1565
RseI	CAYNNNNRTG	4 cut(s)	686, 1242, 1289, 1734
SatI	GCNGC	8 cut(s)	252, 293, 332, 335, 1206, 1323, 1551, 1554
Sau3AI	GATC	7 cut(s)	400, 829, 983, 1105, 1301, 1489, 1585
Sau96I	GGNCC	6 cut(s)	205, 466, 523, 1183, 1644, 1685
SchI	GAGTC	3 cut(s)	1082, 1275, 1484
ScrFI	CCNGG	2 cut(s)	203, 238
SduI	GDGCHC	3 cut(s)	825, 1066, 1336
SfaNI	GCATC	3 cut(s)	643, 748, 1508
SfcI	CTRYAG	2 cut(s)	190, 1458
SfoI	GGCGCC	1 cut(s)	145
SfuI	TTCGAA	1 cut(s)	1315
SgrAI	CRCCGGYG	1 cut(s)	301
SinI	GGWCC	1 cut(s)	1183
SmiMI	CAYNNNNRTG	4 cut(s)	686, 1242, 1289, 1734
SmlI	CTYRAG	4 cut(s)	215, 833, 1209, 1574
SmoI	CTYRAG	4 cut(s)	215, 833, 1209, 1574
Sse9I	AATT	4 cut(s)	118, 579, 1080, 1766
SsiI	CCGC	5 cut(s)	290, 293, 331, 334, 1091
SspDI	GGCGCC	1 cut(s)	143
SspI	AATATT	3 cut(s)	609, 1275, 1432
SspMI	CTAG	1 cut(s)	638
StyD4I	CCNGG	2 cut(s)	201, 236
StyI	CCWWGG	3 cut(s)	1127, 1226, 1753
TaaI	ACNGT	9 cut(s)	153, 159, 380, 668, 769, 827, 1338, 1354, 1778
TaiI	ACGT	2 cut(s)	616, 1796
TaqI	TCGA	3 cut(s)	1315, 1606, 1626
TasI	AATT	4 cut(s)	118, 579, 1080, 1766
TatI	WGTACW	2 cut(s)	992, 1564
TauI	GCSGC	3 cut(s)	295, 334, 337
TscAI	CASTG	3 cut(s)	673, 1341, 1738
TseFI	GTSAC	1 cut(s)	153
TseI	GCWGC	5 cut(s)	251, 1205, 1322, 1550, 1553
Tsp45I	GTSAC	1 cut(s)	153
TspDTI	ATGAA	7 cut(s)	474, 1125, 1134, 1301, 1463, 1484, 1632
TspRI	CASTG	3 cut(s)	673, 1341, 1738
Tth111I	GACNNNGTC	3 cut(s)	355, 1072, 1160
Vha464I	CTTAAG	1 cut(s)	833
VneI	GTGCAC	1 cut(s)	821
VpaK11BI	GGWCC	1 cut(s)	1183
XagI	CCTNNNNNAGG	1 cut(s)	1316
XapI	RAATTY	1 cut(s)	1080
XceI	RCATGY	2 cut(s)	1604, 1706
XmiI	GTMKAC	3 cut(s)	485, 678, 854
XmnI	GAANNNNTTC	1 cut(s)	727
XspI	CTAG	1 cut(s)	638
Zsp2I	ATGCAT	1 cut(s)	658

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.