Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0003975

Physical Location & Seq

Genomic Coordinates Reverse (-)

55825430 .. 55831782

Gene Structure 6353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00206150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGGAACCTGCACCTCAAAACCACCAAAGCCAAACCCCTACGCCTCCAGAGACCCAAATGACCCATCTGACCCTTCCCAGACCCCCAAATCCCTAACCCCCCACCACAATTCCAAAGACGACGCCGTTTCCGGCGCCAGGCAGTCACAGTCCCAGTCGCCGTTCTTCCCCTTCTACAGCCCCAGCCCGGCCCATTACCTCAAGAAGTCTCCGGCGACGACCCGGAGCAAGAGCGCTGCCTCCACGCCCAGCCGGTTTTTCCGGCGACCCTTCCCGCCGCCGTCGCCGGCGAAGCACATTAAGGCCGTGCTGGCGCGGCGGCTGGGGAAGAAGGCGACGGCGTCGGTGGCGATACCGGAGGACGGTGAAGATGAGGATGGGGTTGATCTGGACAAGAGGTTTGGGTTCTCCAAGGAGTTAACTAGTAGATTGGAGGTTGGGGATGAAGTGGGCCGAGGGCATTTTGGGTATACTTGTTCTGCTGTGTTCAAAAAGGGTGAGTTTAAGGGCCAGCAGGTAGCTGTTAAAGTCATCCCTAAAGCAAAGGTTGAATATCTTTGGAAGATGACAACTGCTATTGCAATTGAGGATGTGAGAAGGGAGGTCAAAATATTGCGTGCCTTGACCGGACATACAAACCTAGTTCAGTTCTATGATGCATTTGAAGACAGTGATAATGTCTACATAGTAATGGAGTTGTGTGAAGGTGGGGAGCTTTTGGATAGAATACTTTCAAGGGGTGGAAAATACTCAGAGGATGATGCAAAGACTGTCATGGTTCAAATACTGAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGTGATCTTAAGCCAGAGAACTTTTTGTATACTGCTAAGGATGAGAGTTCGCCATTGAAAGCCATTGACTTTGGCCTATCAGATTTTGCCAAACCAGATGAGAGGCTTAATGATATTGTCGGAAGTGCATACTATGTGGCTCCTGAGGTTCTACATAGATCTTATAGTACGGAGGCTGATGTATGGAGTATAGGTGTAATAGCATATATTCTTTTATGTGGTAGTCGGCCATTTTGGGCTCGGACAGAGTCTGGAATTTTTCGGGCGGTCTTGAAAGCTGATCCCAGTTTTGATGAAGCACCTTGGCCTTCGTTATCTGTTGAAGCGAAGGACTTTGTCAAACGCTTATTAAATAAGGACCCTCGGAAGCGAATGACAGCTGCTCAAGCATTAAGTCATCCTTGGATGAGGAATTATAATGATGTAAAAGTGCCTCTTGATATTTTAATATTTAGACTCATGAAGATGTATATGCGATCGTCATCCCTTCGAAAGGCTGCTTTAAGGGCACTGTCTAAGACATTGACTGTGGAAGAACTCTTTTATCTGAAGGAGCAGTTTGCACTATTAGCCCTAATGAAAAATGCTACAGACGCAATGAAGGAGTCTCGCATTCCTGATCTTATTGCATCGCTAAATGCACTTCAGTACAGAAGAATGGATTTTGAGGAGTTCTGTGCAGCTGCACTAAGTGTGCATCAGCTTGAGGCACTTGATCGTTGGGAACAACATGCTCGATGTGCATATGAACTTTTCGAGAAGGATGGAAACAGGGCGATTGTCATTGAAGAACTTGCTTCAGAACTTGGGCTTGGTCCCTCCATTCCATTACATGTGGTTCTCCATGACTGGATTAGGCACACTGATGGGAAACTAAGCTTCCTTGGATTTGTAAAATTGTTGCACGGTGTGTCCAGCCGGACGTTTGTGAAGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0004713 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018108 GO:0018193 GO:0018209 GO:0018212 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

588

Amino Acids

65.99

Weight (kDa)

8.77

Isoelectric Point (pI)

50.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	145 - 412	4.6e-71	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	145 - 405	8.2e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49580 AT3G19100
fragaria_vesca	FvH4_2g06730
malus_domestica	MD05G1075300.v1.1 MD10G1089900.v1.1
prunus_persica	Prupe.8G117200_v2.0.a1 Prupe.8G117200_v2.0.a1
pyrus_communis	pycom10g07340
rosa_chinensis	RchiOBHm_Chr6g0258891 RchiOBHm_Chr6g0258921
rosa_laevigata	RLG00000002771 RLG00000014571 RLG00000014574 RLG00000014576
rosa_multiflora	Rmu_co8233831.1_g000001 Rmu_sc0004347.1_g000001 Rmu_sc0004485.1_g000023 Rmu_sc0005290.1_g000002 Rmu_sc0009697.1_g000001
rosa_roxburghii	Rroxscaffold_7G00206150 Rroxscaffold_7G00206340
rosa_rugosa	Rorug05G0584400
rosa_samantha	Rh6AG100600 Rh6AG100700 Rh6BG091900 Rh6BG092300 Rh6BG092600 Rh6BG092700 Rh6CG089800 Rh6CG089900 Rh6DG084000 Rh6DG084100
rosa_wichuraiana	Rw6G008740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1245
Acc36I	ACCTGC	2 cut(s)	17, 505
AccB1I	GGYRCC	1 cut(s)	134
AccI	GTMKAC	3 cut(s)	470, 681, 857
AccII	CGCG	1 cut(s)	316
AciI	CCGC	5 cut(s)	275, 278, 316, 319, 1094
AclWI	GGATC	1 cut(s)	1103
AcoI	YGGCCR	1 cut(s)	1055
AcsI	RAATTY	1 cut(s)	1083
AcuI	CTGAAG	4 cut(s)	797, 1397, 1457, 1611
AcyI	GRCGYC	3 cut(s)	123, 135, 341
AdeI	CACNNNGTG	2 cut(s)	1520, 1738
AfaI	GTAC	2 cut(s)	997, 1478
AfeI	AGCGCT	1 cut(s)	235
AfiI	CCNNNNNNNGG	4 cut(s)	138, 187, 362, 1321
AflII	CTTAAG	1 cut(s)	836
AflIII	ACRYGT	1 cut(s)	1660
AgsI	TTSAA	9 cut(s)	490, 551, 665, 735, 782, 886, 1102, 1151, 1616
AhlI	ACTAGT	1 cut(s)	422
AjnI	CCWGG	1 cut(s)	137
AjuI	GAANNNNNNNTTGG	2 cut(s)	1623, 1655
AluBI	AGCT	7 cut(s)	521, 715, 1106, 1208, 1511, 1531, 1707
AluI	AGCT	7 cut(s)	521, 715, 1106, 1208, 1511, 1531, 1707
Alw21I	GWGCWC	1 cut(s)	828
Alw26I	GTCTC	3 cut(s)	45, 213, 1440
Alw44I	GTGCAC	1 cut(s)	824
AlwI	GGATC	1 cut(s)	1103
AlwNI	CAGNNNCTG	1 cut(s)	1079
Aor51HI	AGCGCT	1 cut(s)	235
AoxI	GGCC	7 cut(s)	189, 303, 451, 508, 901, 1055, 1133
ApaLI	GTGCAC	1 cut(s)	824
ApeKI	GCWGC	5 cut(s)	236, 1208, 1325, 1508, 1511
ApoI	RAATTY	1 cut(s)	1083
ArsI	GACNNNNNNTTYG	2 cut(s)	383, 415
Asp700I	GAANNNNTTC	1 cut(s)	730
AspLEI	GCGC	3 cut(s)	137, 236, 316
AspS9I	GGNCC	5 cut(s)	190, 451, 508, 1186, 1643
AsuC2I	CCSGG	2 cut(s)	188, 223
AsuHPI	GGTGA	2 cut(s)	377, 509
AsuII	TTCGAA	1 cut(s)	1318
AvaII	GGWCC	2 cut(s)	1186, 1643
AxyI	CCTNAGG	1 cut(s)	972
BaeGI	GKGCMC	2 cut(s)	828, 1339
BanI	GGYRCC	1 cut(s)	134
BanII	GRGCYC	1 cut(s)	1069
BbsI	GAAGAC	1 cut(s)	672
Bbv12I	GWGCWC	1 cut(s)	828
BbvI	GCAGC	5 cut(s)	223, 1195, 1312, 1498, 1520
BccI	CCATC	4 cut(s)	73, 371, 1586, 1688
BceAI	ACGGC	5 cut(s)	110, 145, 265, 290, 354
BciT130I	CCWGG	1 cut(s)	139
BcnI	CCSGG	2 cut(s)	188, 223
BcoDI	GTCTC	3 cut(s)	45, 213, 1440
BcuI	ACTAGT	1 cut(s)	422
BfaI	CTAG	2 cut(s)	423, 641
BfmI	CTRYAG	2 cut(s)	175, 1416
BfoI	RGCGCY	2 cut(s)	138, 237
BfrI	CTTAAG	1 cut(s)	836
BfuAI	ACCTGC	2 cut(s)	17, 505
BglI	GCCNNNNNGGC	1 cut(s)	311
BglII	AGATCT	1 cut(s)	986
BisI	GCNGC	8 cut(s)	237, 278, 317, 320, 1209, 1326, 1509, 1512
BlsI	GCNGC	8 cut(s)	238, 279, 318, 321, 1210, 1327, 1510, 1513
Bme1390I	CCNGG	3 cut(s)	139, 188, 223
Bme18I	GGWCC	2 cut(s)	1186, 1643
BmgT120I	GGNCC	5 cut(s)	190, 451, 508, 1186, 1643
BmiI	GGNNCC	5 cut(s)	7, 136, 969, 1188, 1645
BmrFI	CCNGG	3 cut(s)	139, 188, 223
BmrI	ACTGGG	2 cut(s)	148, 1107
BmsI	GCATC	4 cut(s)	646, 751, 1466, 1534
BmuI	ACTGGG	2 cut(s)	148, 1107
BpiI	GAAGAC	1 cut(s)	672
BpmI	CTGGAG	1 cut(s)	31
Bpu10I	CCTNAGC	1 cut(s)	864
Bpu14I	TTCGAA	1 cut(s)	1318
BpuEI	CTTGAG	3 cut(s)	185, 1197, 1553
BpuMI	CCSGG	2 cut(s)	188, 223
BsaBI	GATNNNNATC	1 cut(s)	1309
BsaHI	GRCGYC	3 cut(s)	123, 135, 341
BsaI	GGTCTC	1 cut(s)	45
BsaJI	CCNNGG	6 cut(s)	411, 454, 1130, 1190, 1229, 1711
BsaWI	WCCGGW	2 cut(s)	355, 626
BsaXI	ACNNNNNCTCC	2 cut(s)	1006, 1036
Bsc4I	CCNNNNNNNGG	4 cut(s)	138, 187, 362, 1321
Bse118I	RCCGGY	2 cut(s)	252, 286
Bse1I	ACTGG	3 cut(s)	154, 1113, 1682
Bse21I	CCTNAGG	1 cut(s)	972
Bse3DI	GCAATG	1 cut(s)	1431
Bse8I	GATNNNNATC	1 cut(s)	1309
BseBI	CCWGG	1 cut(s)	139
BseDI	CCNNGG	6 cut(s)	411, 454, 1130, 1190, 1229, 1711
BseJI	GATNNNNATC	1 cut(s)	1309
BseLI	CCNNNNNNNGG	4 cut(s)	138, 187, 362, 1321
BseMI	GCAATG	1 cut(s)	1431
BseMII	CTCAG	2 cut(s)	765, 963
BseNI	ACTGG	3 cut(s)	154, 1113, 1682
BseRI	GAGGAG	1 cut(s)	1511
BseSI	GKGCMC	2 cut(s)	828, 1339
BseXI	GCAGC	5 cut(s)	223, 1195, 1312, 1498, 1520
BseYI	CCCAGC	3 cut(s)	182, 248, 322
BsgI	GTGCAG	2 cut(s)	1497, 1527
Bsh1236I	CGCG	1 cut(s)	316
Bsh1285I	CGRYCG	1 cut(s)	1307
BshFI	GGCC	7 cut(s)	191, 305, 453, 510, 903, 1057, 1135
BshNI	GGYRCC	1 cut(s)	134
BsiEI	CGRYCG	1 cut(s)	1307
BsiHKAI	GWGCWC	1 cut(s)	828
BslFI	GGGAC	2 cut(s)	136, 1629
BslI	CCNNNNNNNGG	4 cut(s)	138, 187, 362, 1321
BsmAI	GTCTC	3 cut(s)	45, 213, 1440
BsmFI	GGGAC	2 cut(s)	136, 1629
BsmI	GAATGC	1 cut(s)	1440
BsnI	GGCC	7 cut(s)	191, 305, 453, 510, 903, 1057, 1135
Bso31I	GGTCTC	1 cut(s)	45
Bsp119I	TTCGAA	1 cut(s)	1318
Bsp1286I	GDGCHC	3 cut(s)	828, 1069, 1339
Bsp143I	GATC	7 cut(s)	385, 832, 986, 1108, 1304, 1447, 1543
BspACI	CCGC	5 cut(s)	275, 278, 316, 319, 1094
BspANI	GGCC	7 cut(s)	191, 305, 453, 510, 903, 1057, 1135
BspCNI	CTCAG	2 cut(s)	764, 964
BspFNI	CGCG	1 cut(s)	316
BspHI	TCATGA	1 cut(s)	1287
BspLI	GGNNCC	5 cut(s)	7, 136, 969, 1188, 1645
BspMI	ACCTGC	2 cut(s)	17, 505
BspPI	GGATC	1 cut(s)	1103
BspT104I	TTCGAA	1 cut(s)	1318
BspT107I	GGYRCC	1 cut(s)	134
BspTI	CTTAAG	1 cut(s)	836
BspTNI	GGTCTC	1 cut(s)	45
BsrDI	GCAATG	1 cut(s)	1431
BsrFI	RCCGGY	2 cut(s)	252, 286
BsrI	ACTGG	3 cut(s)	154, 1113, 1682
BssAI	RCCGGY	2 cut(s)	252, 286
BssECI	CCNNGG	6 cut(s)	411, 454, 1130, 1190, 1229, 1711
BssMI	GATC	7 cut(s)	385, 832, 986, 1108, 1304, 1447, 1543
BssNAI	GTATAC	2 cut(s)	471, 858
BssNI	GRCGYC	3 cut(s)	123, 135, 341
BssT1I	CCWWGG	4 cut(s)	411, 1130, 1229, 1711
Bst1107I	GTATAC	2 cut(s)	471, 858
Bst2UI	CCWGG	1 cut(s)	139
Bst4CI	ACNGT	8 cut(s)	150, 365, 671, 772, 830, 1341, 1357, 1736
BstACI	GRCGYC	3 cut(s)	123, 135, 341
BstAFI	CTTAAG	1 cut(s)	836
BstBI	TTCGAA	1 cut(s)	1318
BstC8I	GCNNGC	4 cut(s)	288, 312, 512, 618
BstDEI	CTNAG	7 cut(s)	751, 864, 972, 1344, 1517, 1703, 1764
BstENI	CCTNNNNNAGG	1 cut(s)	1319
BstFNI	CGCG	1 cut(s)	316
BstH2I	RGCGCY	2 cut(s)	138, 237
BstHHI	GCGC	3 cut(s)	137, 236, 316
BstKTI	GATC	7 cut(s)	388, 835, 989, 1111, 1307, 1450, 1546
BstMAI	GTCTC	3 cut(s)	45, 213, 1440
BstMBI	GATC	7 cut(s)	385, 832, 986, 1108, 1304, 1447, 1543
BstMCI	CGRYCG	1 cut(s)	1307
BstNI	CCWGG	1 cut(s)	139
BstNSI	RCATGY	2 cut(s)	1562, 1664
BstSCI	CCNGG	3 cut(s)	137, 186, 221
BstSFI	CTRYAG	2 cut(s)	175, 1416
BstSLI	GKGCMC	2 cut(s)	828, 1339
BstUI	CGCG	1 cut(s)	316
BstV1I	GCAGC	5 cut(s)	223, 1195, 1312, 1498, 1520
BstV2I	GAAGAC	1 cut(s)	672
BstX2I	RGATCY	1 cut(s)	986
BstYI	RGATCY	1 cut(s)	986
BstZ17I	GTATAC	2 cut(s)	471, 858
Bsu36I	CCTNAGG	1 cut(s)	972
BsuRI	GGCC	7 cut(s)	191, 305, 453, 510, 903, 1057, 1135
BtgZI	GCGATG	1 cut(s)	1443
BtsIMutI	CAGTG	3 cut(s)	676, 1337, 1689
BveI	ACCTGC	2 cut(s)	17, 505
Cac8I	GCNNGC	4 cut(s)	288, 312, 512, 618
CaiI	CAGNNNCTG	1 cut(s)	1079
CciI	TCATGA	1 cut(s)	1287
CfoI	GCGC	3 cut(s)	137, 236, 316
Cfr10I	RCCGGY	2 cut(s)	252, 286
Cfr13I	GGNCC	5 cut(s)	190, 451, 508, 1186, 1643
CseI	GACGC	3 cut(s)	131, 330, 1430
Csp6I	GTAC	2 cut(s)	996, 1477
CviAII	CATG	5 cut(s)	775, 1288, 1559, 1661, 1673
CviQI	GTAC	2 cut(s)	996, 1477
DdeI	CTNAG	7 cut(s)	751, 864, 972, 1344, 1517, 1703, 1764
DinI	GGCGCC	1 cut(s)	136
DpnI	GATC	7 cut(s)	387, 834, 988, 1110, 1306, 1449, 1545
DpnII	GATC	7 cut(s)	385, 832, 986, 1108, 1304, 1447, 1543
DraIII	CACNNNGTG	2 cut(s)	1520, 1738
EaeI	YGGCCR	1 cut(s)	1055
Eco130I	CCWWGG	4 cut(s)	411, 1130, 1229, 1711
Eco24I	GRGCYC	1 cut(s)	1069
Eco31I	GGTCTC	1 cut(s)	45
Eco47I	GGWCC	2 cut(s)	1186, 1643
Eco47III	AGCGCT	1 cut(s)	235
Eco57I	CTGAAG	4 cut(s)	797, 1397, 1457, 1611
Eco81I	CCTNAGG	1 cut(s)	972
EcoNI	CCTNNNNNAGG	1 cut(s)	1319
EcoO109I	RGGNCCY	1 cut(s)	1186
EcoRII	CCWGG	1 cut(s)	137
EcoT14I	CCWWGG	4 cut(s)	411, 1130, 1229, 1711
EcoT22I	ATGCAT	1 cut(s)	661
EcoT38I	GRGCYC	1 cut(s)	1069
EgeI	GGCGCC	1 cut(s)	136
EheI	GGCGCC	1 cut(s)	136
ErhI	CCWWGG	4 cut(s)	411, 1130, 1229, 1711
FaeI	CATG	5 cut(s)	778, 1291, 1562, 1664, 1676
FalI	AAGNNNNNCTT	4 cut(s)	1213, 1245, 1248, 1280
FaqI	GGGAC	2 cut(s)	136, 1629
FatI	CATG	5 cut(s)	774, 1287, 1558, 1660, 1672
FauI	CCCGC	1 cut(s)	282
FauNDI	CATATG	1 cut(s)	1573
FblI	GTMKAC	3 cut(s)	470, 681, 857
Fnu4HI	GCNGC	8 cut(s)	237, 278, 317, 320, 1209, 1326, 1509, 1512
FriOI	GRGCYC	1 cut(s)	1069
Fsp4HI	GCNGC	8 cut(s)	237, 278, 317, 320, 1209, 1326, 1509, 1512
FspBI	CTAG	2 cut(s)	423, 641
GlaI	GCGC	3 cut(s)	136, 235, 315
GluI	GCNGC	8 cut(s)	237, 278, 317, 320, 1209, 1326, 1509, 1512
GsaI	CCCAGC	3 cut(s)	186, 252, 326
GsuI	CTGGAG	1 cut(s)	31
HaeII	RGCGCY	2 cut(s)	138, 237
HaeIII	GGCC	7 cut(s)	191, 305, 453, 510, 903, 1057, 1135
HgaI	GACGC	3 cut(s)	131, 330, 1430
HhaI	GCGC	3 cut(s)	137, 236, 316
Hin1I	GRCGYC	3 cut(s)	123, 135, 341
Hin1II	CATG	5 cut(s)	778, 1291, 1562, 1664, 1676
Hin6I	GCGC	3 cut(s)	135, 234, 314
HinP1I	GCGC	3 cut(s)	135, 234, 314
HincII	GTYRAC	1 cut(s)	420
HindII	GTYRAC	1 cut(s)	420
HindIII	AAGCTT	1 cut(s)	1705
HinfI	GANTC	3 cut(s)	1076, 1284, 1433
HpaI	GTTAAC	1 cut(s)	420
HphI	GGTGA	2 cut(s)	377, 509
Hpy166II	GTNNAC	5 cut(s)	420, 471, 682, 826, 858
Hpy188I	TCNGA	8 cut(s)	70, 754, 910, 950, 1071, 1194, 1377, 1630
Hpy8I	GTNNAC	5 cut(s)	420, 471, 682, 826, 858
Hpy99I	CGWCG	5 cut(s)	125, 220, 286, 340, 346
HpyCH4III	ACNGT	8 cut(s)	150, 365, 671, 772, 830, 1341, 1357, 1736
HpyCH4IV	ACGT	1 cut(s)	1751
HpyF3I	CTNAG	7 cut(s)	751, 864, 972, 1344, 1517, 1703, 1764
HpySE526I	ACGT	1 cut(s)	1751
Hsp92I	GRCGYC	3 cut(s)	123, 135, 341
Hsp92II	CATG	5 cut(s)	778, 1291, 1562, 1664, 1676
HspAI	GCGC	3 cut(s)	135, 234, 314
KasI	GGCGCC	1 cut(s)	134
KroI	GCCGGC	1 cut(s)	286
KroNI	GCCGGC	1 cut(s)	288
KspAI	GTTAAC	1 cut(s)	420
Kzo9I	GATC	7 cut(s)	385, 832, 986, 1108, 1304, 1447, 1543
LmnI	GCTCC	4 cut(s)	225, 712, 973, 1381
Lsp1109I	GCAGC	5 cut(s)	223, 1195, 1312, 1498, 1520
LweI	GCATC	4 cut(s)	646, 751, 1466, 1534
MaeI	CTAG	2 cut(s)	423, 641
MaeII	ACGT	1 cut(s)	1751
MaeIII	GTNAC	1 cut(s)	144
MalI	GATC	7 cut(s)	387, 834, 988, 1110, 1306, 1449, 1545
MboI	GATC	7 cut(s)	385, 832, 986, 1108, 1304, 1447, 1543
MfeI	CAATTG	1 cut(s)	582
MflI	RGATCY	1 cut(s)	986
MhlI	GDGCHC	3 cut(s)	828, 1069, 1339
MluCI	AATT	5 cut(s)	109, 582, 1083, 1240, 1724
Mly113I	GGCGCC	1 cut(s)	135
MlyI	GAGTC	3 cut(s)	1085, 1278, 1442
MmeI	TCCRAC	1 cut(s)	928
Mph1103I	ATGCAT	1 cut(s)	661
MreI	CGCCGGCG	1 cut(s)	286
MroNI	GCCGGC	1 cut(s)	286
MroXI	GAANNNNTTC	1 cut(s)	730
MslI	CAYNNNNRTG	3 cut(s)	689, 1292, 1692
MspA1I	CMGCKG	2 cut(s)	1208, 1511
MspCI	CTTAAG	1 cut(s)	836
MspR9I	CCNGG	3 cut(s)	139, 188, 223
MunI	CAATTG	1 cut(s)	582
Mva1269I	GAATGC	1 cut(s)	1440
MvaI	CCWGG	1 cut(s)	139
MvnI	CGCG	1 cut(s)	316
NaeI	GCCGGC	1 cut(s)	288
NarI	GGCGCC	1 cut(s)	135
NciI	CCSGG	2 cut(s)	188, 223
NdeI	CATATG	1 cut(s)	1573
NdeII	GATC	7 cut(s)	385, 832, 986, 1108, 1304, 1447, 1543
NgoMIV	GCCGGC	1 cut(s)	286
NlaIII	CATG	5 cut(s)	778, 1291, 1562, 1664, 1676
NlaIV	GGNNCC	5 cut(s)	7, 136, 969, 1188, 1645
NmeAIII	GCCGAG	1 cut(s)	479
NmuCI	GTSAC	1 cut(s)	144
NsiI	ATGCAT	1 cut(s)	661
NspI	RCATGY	2 cut(s)	1562, 1664
NspV	TTCGAA	1 cut(s)	1318
PagI	TCATGA	1 cut(s)	1287
PciI	ACATGT	1 cut(s)	1660
PctI	GAATGC	1 cut(s)	1440
PdiI	GCCGGC	1 cut(s)	288
PdmI	GAANNNNTTC	1 cut(s)	730
PflFI	GACNNNGTC	3 cut(s)	340, 1075, 1163
PkrI	GCNGC	8 cut(s)	238, 279, 318, 321, 1210, 1327, 1510, 1513
Ple19I	CGATCG	1 cut(s)	1307
PleI	GAGTC	3 cut(s)	1084, 1278, 1441
PluTI	GGCGCC	1 cut(s)	138
PpsI	GAGTC	3 cut(s)	1084, 1278, 1441
PpuMI	RGGWCCY	1 cut(s)	1186
PscI	ACATGT	1 cut(s)	1660
PsiI	TTATAA	1 cut(s)	1245
Psp5II	RGGWCCY	1 cut(s)	1186
Psp6I	CCWGG	1 cut(s)	137
PspFI	CCCAGC	3 cut(s)	182, 248, 322
PspGI	CCWGG	1 cut(s)	137
PspN4I	GGNNCC	5 cut(s)	7, 136, 969, 1188, 1645
PspPI	GGNCC	5 cut(s)	190, 451, 508, 1186, 1643
PspPPI	RGGWCCY	1 cut(s)	1186
PstNI	CAGNNNCTG	1 cut(s)	1079
PsuI	RGATCY	1 cut(s)	986
PsyI	GACNNNGTC	3 cut(s)	340, 1075, 1163
PvuI	CGATCG	1 cut(s)	1307
PvuII	CAGCTG	2 cut(s)	1208, 1511
RsaI	GTAC	2 cut(s)	997, 1478
RsaNI	GTAC	2 cut(s)	996, 1477
RseI	CAYNNNNRTG	3 cut(s)	689, 1292, 1692
SatI	GCNGC	8 cut(s)	237, 278, 317, 320, 1209, 1326, 1509, 1512
Sau3AI	GATC	7 cut(s)	385, 832, 986, 1108, 1304, 1447, 1543
Sau96I	GGNCC	5 cut(s)	190, 451, 508, 1186, 1643
SchI	GAGTC	3 cut(s)	1085, 1278, 1442
ScrFI	CCNGG	3 cut(s)	139, 188, 223
SduI	GDGCHC	3 cut(s)	828, 1069, 1339
SfaNI	GCATC	4 cut(s)	646, 751, 1466, 1534
SfcI	CTRYAG	2 cut(s)	175, 1416
SfoI	GGCGCC	1 cut(s)	136
SfuI	TTCGAA	1 cut(s)	1318
SgrAI	CRCCGGYG	1 cut(s)	286
SinI	GGWCC	2 cut(s)	1186, 1643
SmiMI	CAYNNNNRTG	3 cut(s)	689, 1292, 1692
SmlI	CTYRAG	4 cut(s)	200, 836, 1212, 1532
SmoI	CTYRAG	4 cut(s)	200, 836, 1212, 1532
SpeI	ACTAGT	1 cut(s)	422
Sse9I	AATT	5 cut(s)	109, 582, 1083, 1240, 1724
SsiI	CCGC	5 cut(s)	275, 278, 316, 319, 1094
SspDI	GGCGCC	1 cut(s)	134
SspI	AATATT	2 cut(s)	612, 1278
SspMI	CTAG	2 cut(s)	423, 641
StyD4I	CCNGG	3 cut(s)	137, 186, 221
StyI	CCWWGG	4 cut(s)	411, 1130, 1229, 1711
TaaI	ACNGT	8 cut(s)	150, 365, 671, 772, 830, 1341, 1357, 1736
TaiI	ACGT	1 cut(s)	1754
TaqI	TCGA	3 cut(s)	1318, 1564, 1584
TasI	AATT	5 cut(s)	109, 582, 1083, 1240, 1724
TatI	WGTACW	1 cut(s)	1476
TauI	GCSGC	3 cut(s)	280, 319, 322
TscAI	CASTG	3 cut(s)	676, 1344, 1696
TseFI	GTSAC	1 cut(s)	144
TseI	GCWGC	5 cut(s)	236, 1208, 1325, 1508, 1511
Tsp45I	GTSAC	1 cut(s)	144
TspDTI	ATGAA	6 cut(s)	459, 1137, 1304, 1421, 1442, 1590
TspGWI	ACGGA	1 cut(s)	1013
TspRI	CASTG	3 cut(s)	676, 1344, 1696
Tth111I	GACNNNGTC	3 cut(s)	340, 1075, 1163
Vha464I	CTTAAG	1 cut(s)	836
VneI	GTGCAC	1 cut(s)	824
VpaK11BI	GGWCC	2 cut(s)	1186, 1643
XagI	CCTNNNNNAGG	1 cut(s)	1319
XapI	RAATTY	1 cut(s)	1083
XceI	RCATGY	2 cut(s)	1562, 1664
XmiI	GTMKAC	3 cut(s)	470, 681, 857
XmnI	GAANNNNTTC	1 cut(s)	730
XspI	CTAG	2 cut(s)	423, 641
Zsp2I	ATGCAT	1 cut(s)	661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.