MD10G1151200.v1.1

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
23811362 .. 23818065
6704 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1151200.v1.1.491

Sequence Viewer

Length: 1482 bp
ATGGCTGGGAGAATATTATATTTATTTTTTGTGCCATTAATTTACACTTTCTTGAGCATTTTGCCAACCCAATCAGCTCCTCAATCTGCACTCGTATCCCAGATTCCTGGATTCAGTGGCACTCTTCCTTCAAAACATTATGCTGGGTATGTGACAGTTGACCAGAGTCATGGGAGGAACCTGTTCTACTATTTCGTCGAATCAGAAGGGAAGCCGGCGGAGGATCCGGTGGTTCTGTGGCTCAATGGTGGACCTGGATGCTCCAGCTTTGATGGCTTTGTTTATGAGCATGGGCCATTCAATTTTGAAAAGGCCAAGACCAAGGGAAGTCTGACCCAACTCCACCTTAATCCATATAGCTGGTCGAAGGTTTCCAACATTATATATCTGGACTCTCCTGCTGGTGTTGGATTTTCTTACTCAAAAAATGAGACTGACTATGAAACTGGGGATCTAAAGACTGCCTCTGATTCCCACGCATTTCTCCTCAAGTGGTTTGAACTTTATCCTGAGTTCCTCTCCAACCCATTTTTTATTGCTGGGGAGTCATATGCCGGAGTCTACGTGCCGACGCTTTCTTCTGAAGTAGTGAAAGGAATTGATGCTGGTGTAACGCCTGTTCTCAACTTCAAGGGTTATCTGGTGGGAAATGGCGTTACGGATGATAAATTCGATGGTAACGCTCTTGTTCCGTTTGCACACGGGATGGGAATGATATCAGATGATCTATACGAGGTTAACACGGCGTGCGGAGGAAACTACATTTATCCGGTGAATGATAATTGTGAGAGCAAGCTTAAAAAAGTTGACAAGAACATAGAAGATTTGAACATATATGACATTCTGGAACCATGCTATCACAGCACAGATTCGAGTAAGAACAGAAAAGTTACAAAGAGCGGATTGCCATCTAGCTTTCGACGGTTGGGTGAGACTGAAAGGCCACTTGCTGTCAGAAAAAGAATGTTTGGTCGTGCCTGGCCTCTTAGAGCTCCTGTGAGGGATGGTATTGTTCCAACTTGGCCGGAGCTGATGGATAGTGAAAGTGTTCCGTGTATTAATGATGAGGTTGCTACTGAATGGTTGAACAACGAAACTGTTAGGAAGGCAATCCATGCAGAAACGGATTTTTCATGGGAATTATGCACAAGCAGAATTGAATTTTATCATGATTCTGGAAGTATGATCAAGTACCACAAGAACCTCACTGCAAAGGGTTATCGGGCACTTATATATAGCGGTGATCATGATATGTGTGTTCCTTTCACTGGGAGTGAAGCATGGACTAGATCACTTGGTTATAAGATTGTGGATGAATGGAGGCCATGGACTTCGAACGGACAAGTTGCTGGGTACACACAGGGTTACGAGAATAACCTCACCTTTCTAACTGTAAAGGGGTCTGGACATACAGTTCCAGAGTACAAACCACGAGAGGCGTTTGATTTGTTTAGCCGGTTTTTGGCTGGAAAACCACAATAA

Protein Analysis

494

Amino Acids

55.18

Weight (kDa)

5.61

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 36 - 489 5.2e-144 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1302
AccBSI CCGCTC 1 cut(s) 900
AccI GTMKAC 1 cut(s) 561
AciI CCGC 4 cut(s) 218, 750, 900, 1239
AclWI GGATC 3 cut(s) 218, 231, 459
AcoI YGGCCR 1 cut(s) 1022
AcsI RAATTY 2 cut(s) 668, 1160
AcuI CTGAAG 1 cut(s) 603
AdeI CACNNNGTG 1 cut(s) 747
AfaI GTAC 3 cut(s) 1193, 1355, 1424
AfiI CCNNNNNNNGG 2 cut(s) 1268, 1462
AgsI TTSAA 8 cut(s) 132, 301, 308, 500, 631, 829, 1087, 1160
AjnI CCWGG 3 cut(s) 106, 253, 977
AloI GAACNNNNNNTCC 2 cut(s) 1398, 1430
AluBI AGCT 7 cut(s) 77, 267, 360, 796, 915, 992, 1030
AluI AGCT 7 cut(s) 77, 267, 360, 796, 915, 992, 1030
Alw21I GWGCWC 1 cut(s) 994
Alw26I GTCTC 2 cut(s) 425, 926
AlwI GGATC 3 cut(s) 218, 231, 459
AoxI GGCC 6 cut(s) 293, 312, 941, 980, 1022, 1322
ApoI RAATTY 2 cut(s) 668, 1160
AseI ATTAAT 2 cut(s) 38, 1059
Asp700I GAANNNNTTC 2 cut(s) 182, 1047
AspS9I GGNCC 2 cut(s) 251, 293
AsuHPI GGTGA 4 cut(s) 784, 941, 1253, 1372
AsuII TTCGAA 1 cut(s) 1334
AvaII GGWCC 1 cut(s) 251
BaeGI GKGCMC 1 cut(s) 1228
BamHI GGATCC 1 cut(s) 223
BanII GRGCYC 1 cut(s) 994
BauI CACGAG 1 cut(s) 1431
Bbv12I GWGCWC 1 cut(s) 994
BccI CCATC 6 cut(s) 266, 668, 700, 916, 998, 1027
BceAI ACGGC 1 cut(s) 759
BciT130I CCWGG 3 cut(s) 108, 255, 979
BciVI GTATCC 1 cut(s) 106
BclI TGATCA 2 cut(s) 1185, 1243
BcoDI GTCTC 2 cut(s) 425, 926
BfaI CTAG 2 cut(s) 912, 1287
BfuI GTATCC 1 cut(s) 106
Bme1390I CCNGG 3 cut(s) 108, 255, 979
Bme18I GGWCC 1 cut(s) 251
BmgT120I GGNCC 2 cut(s) 251, 293
BmiI GGNNCC 3 cut(s) 179, 225, 849
BmrFI CCNGG 3 cut(s) 108, 255, 979
BmrI ACTGGG 2 cut(s) 456, 1278
BmsI GCATC 2 cut(s) 248, 592
BmuI ACTGGG 2 cut(s) 456, 1278
BoxI GACNNNNGTC 1 cut(s) 165
BplI GAGNNNNNCTC 2 cut(s) 503, 535
BpmI CTGGAG 1 cut(s) 247
Bpu14I TTCGAA 1 cut(s) 1334
BpuEI CTTGAG 2 cut(s) 73, 473
BsaAI YACGTR 1 cut(s) 565
BsaBI GATNNNNATC 1 cut(s) 907
BsaJI CCNNGG 2 cut(s) 321, 1325
BsaWI WCCGGW 2 cut(s) 226, 769
BsaXI ACNNNNNCTCC 2 cut(s) 549, 579
Bsc4I CCNNNNNNNGG 2 cut(s) 1268, 1462
Bse118I RCCGGY 2 cut(s) 214, 1455
Bse1I ACTGG 2 cut(s) 451, 1273
Bse8I GATNNNNATC 1 cut(s) 907
BseBI CCWGG 3 cut(s) 108, 255, 979
BseDI CCNNGG 2 cut(s) 321, 1325
BseGI GGATG 5 cut(s) 263, 667, 711, 1009, 1318
BseJI GATNNNNATC 1 cut(s) 907
BseLI CCNNNNNNNGG 2 cut(s) 1268, 1462
BseMII CTCAG 1 cut(s) 501
BseNI ACTGG 2 cut(s) 451, 1273
BseRI GAGGAG 2 cut(s) 69, 476
BseSI GKGCMC 1 cut(s) 1228
BseYI CCCAGC 4 cut(s) 5, 143, 539, 1349
BsgI GTGCAG 1 cut(s) 72
BshFI GGCC 6 cut(s) 295, 314, 943, 982, 1024, 1324
BsiHKAI GWGCWC 1 cut(s) 994
BsiSI CCGG 6 cut(s) 215, 227, 555, 770, 1025, 1456
BslI CCNNNNNNNGG 2 cut(s) 1268, 1462
BsmAI GTCTC 2 cut(s) 425, 926
BsnI GGCC 6 cut(s) 295, 314, 943, 982, 1024, 1324
Bsp119I TTCGAA 1 cut(s) 1334
Bsp1286I GDGCHC 2 cut(s) 994, 1228
Bsp143I GATC 6 cut(s) 223, 451, 724, 1185, 1243, 1289
Bsp19I CCATGG 1 cut(s) 1325
BspACI CCGC 4 cut(s) 218, 750, 900, 1239
BspANI GGCC 6 cut(s) 295, 314, 943, 982, 1024, 1324
BspCNI CTCAG 1 cut(s) 502
BspHI TCATGA 2 cut(s) 1168, 1246
BspLI GGNNCC 3 cut(s) 179, 225, 849
BspPI GGATC 3 cut(s) 218, 231, 459
BspT104I TTCGAA 1 cut(s) 1334
BsrBI CCGCTC 1 cut(s) 900
BsrFI RCCGGY 2 cut(s) 214, 1455
BsrI ACTGG 2 cut(s) 451, 1273
BssAI RCCGGY 2 cut(s) 214, 1455
BssECI CCNNGG 2 cut(s) 321, 1325
BssMI GATC 6 cut(s) 223, 451, 724, 1185, 1243, 1289
BssSI CACGAG 1 cut(s) 1431
BssT1I CCWWGG 2 cut(s) 321, 1325
Bst2BI CACGAG 1 cut(s) 1431
Bst2UI CCWGG 3 cut(s) 108, 255, 979
Bst4CI ACNGT 5 cut(s) 157, 924, 1099, 1393, 1414
Bst6I CTCTTC 1 cut(s) 129
BstAPI GCANNNNNTGC 1 cut(s) 1115
BstBAI YACGTR 1 cut(s) 565
BstBI TTCGAA 1 cut(s) 1334
BstC8I GCNNGC 3 cut(s) 216, 748, 794
BstDEI CTNAG 2 cut(s) 510, 986
BstDSI CCRYGG 1 cut(s) 1325
BstF5I GGATG 5 cut(s) 263, 667, 711, 1009, 1318
BstKTI GATC 6 cut(s) 226, 454, 727, 1188, 1246, 1292
BstMAI GTCTC 2 cut(s) 425, 926
BstMBI GATC 6 cut(s) 223, 451, 724, 1185, 1243, 1289
BstMWI GCNNNNNNNGC 3 cut(s) 273, 861, 1115
BstNI CCWGG 3 cut(s) 108, 255, 979
BstPAI GACNNNNGTC 1 cut(s) 165
BstSCI CCNGG 3 cut(s) 106, 253, 977
BstSLI GKGCMC 1 cut(s) 1228
BstX2I RGATCY 2 cut(s) 223, 451
BstXI CCANNNNNNTGG 3 cut(s) 107, 170, 360
BstYI RGATCY 2 cut(s) 223, 451
BsuI GTATCC 1 cut(s) 106
BsuRI GGCC 6 cut(s) 295, 314, 943, 982, 1024, 1324
BtgI CCRYGG 1 cut(s) 1325
BtsCI GGATG 5 cut(s) 263, 667, 711, 1009, 1318
BtsI GCAGTG 1 cut(s) 1206
BtsIMutI CAGTG 3 cut(s) 121, 1206, 1266
Cac8I GCNNGC 3 cut(s) 216, 748, 794
CciI TCATGA 2 cut(s) 1168, 1246
Cfr10I RCCGGY 2 cut(s) 214, 1455
Cfr13I GGNCC 2 cut(s) 251, 293
CseI GACGC 1 cut(s) 580
Csp6I GTAC 3 cut(s) 1192, 1354, 1423
CviAII CATG 9 cut(s) 170, 290, 852, 1115, 1134, 1169, 1247, 1281, 1326
CviQI GTAC 3 cut(s) 1192, 1354, 1423
DdeI CTNAG 2 cut(s) 510, 986
DpnI GATC 6 cut(s) 225, 453, 726, 1187, 1245, 1291
DpnII GATC 6 cut(s) 223, 451, 724, 1185, 1243, 1289
DraIII CACNNNGTG 1 cut(s) 747
EaeI YGGCCR 1 cut(s) 1022
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
EciI GGCGGA 1 cut(s) 233
Ecl136II GAGCTC 1 cut(s) 992
Eco130I CCWWGG 2 cut(s) 321, 1325
Eco24I GRGCYC 1 cut(s) 994
Eco32I GATATC 1 cut(s) 717
Eco47I GGWCC 1 cut(s) 251
Eco53kI GAGCTC 1 cut(s) 992
Eco57I CTGAAG 1 cut(s) 603
EcoICRI GAGCTC 1 cut(s) 992
EcoRII CCWGG 3 cut(s) 106, 253, 977
EcoRV GATATC 1 cut(s) 717
EcoT14I CCWWGG 2 cut(s) 321, 1325
EcoT38I GRGCYC 1 cut(s) 994
ErhI CCWWGG 2 cut(s) 321, 1325
FaeI CATG 9 cut(s) 173, 293, 855, 1118, 1137, 1172, 1250, 1284, 1329
FatI CATG 9 cut(s) 169, 289, 851, 1114, 1133, 1168, 1246, 1280, 1325
FauNDI CATATG 1 cut(s) 550
FbaI TGATCA 2 cut(s) 1185, 1243
FblI GTMKAC 1 cut(s) 561
FokI GGATG 5 cut(s) 270, 674, 718, 1016, 1325
FriOI GRGCYC 1 cut(s) 994
FspBI CTAG 2 cut(s) 912, 1287
GsaI CCCAGC 4 cut(s) 9, 147, 543, 1353
GsuI CTGGAG 1 cut(s) 247
HaeIII GGCC 6 cut(s) 295, 314, 943, 982, 1024, 1324
HapII CCGG 6 cut(s) 215, 227, 555, 770, 1025, 1456
HgaI GACGC 1 cut(s) 580
Hin1II CATG 9 cut(s) 173, 293, 855, 1118, 1137, 1172, 1250, 1284, 1329
HincII GTYRAC 3 cut(s) 160, 739, 808
HindII GTYRAC 3 cut(s) 160, 739, 808
HindIII AAGCTT 1 cut(s) 794
HpaI GTTAAC 1 cut(s) 739
HpaII CCGG 6 cut(s) 215, 227, 555, 770, 1025, 1456
HphI GGTGA 4 cut(s) 784, 941, 1253, 1372
Hpy166II GTNNAC 6 cut(s) 160, 251, 562, 739, 808, 1356
Hpy188I TCNGA 6 cut(s) 205, 333, 469, 583, 721, 956
Hpy188III TCNNGA 9 cut(s) 52, 389, 509, 845, 1169, 1176, 1247, 1404, 1418
Hpy8I GTNNAC 6 cut(s) 160, 251, 562, 739, 808, 1356
Hpy99I CGWCG 3 cut(s) 200, 574, 924
HpyAV CCTTC 4 cut(s) 138, 200, 361, 1099
HpyCH4III ACNGT 5 cut(s) 157, 924, 1099, 1393, 1414
HpyCH4IV ACGT 1 cut(s) 564
HpyCH4V TGCA 5 cut(s) 89, 698, 1118, 1146, 1211
HpyF10VI GCNNNNNNNGC 3 cut(s) 273, 861, 1115
HpyF3I CTNAG 2 cut(s) 510, 986
HpySE526I ACGT 1 cut(s) 564
Hsp92II CATG 9 cut(s) 173, 293, 855, 1118, 1137, 1172, 1250, 1284, 1329
KroI GCCGGC 1 cut(s) 214
KroNI GCCGGC 1 cut(s) 216
Ksp22I TGATCA 2 cut(s) 1185, 1243
KspAI GTTAAC 1 cut(s) 739
Kzo9I GATC 6 cut(s) 223, 451, 724, 1185, 1243, 1289
LmnI GCTCC 4 cut(s) 82, 266, 997, 1027
LweI GCATC 2 cut(s) 248, 592
MaeI CTAG 2 cut(s) 912, 1287
MaeII ACGT 1 cut(s) 564
MaeIII GTNAC 6 cut(s) 151, 610, 655, 677, 889, 1364
MalI GATC 6 cut(s) 225, 453, 726, 1187, 1245, 1291
MbiI CCGCTC 1 cut(s) 900
MboI GATC 6 cut(s) 223, 451, 724, 1185, 1243, 1289
MboII GAAGA 3 cut(s) 116, 570, 833
MflI RGATCY 2 cut(s) 223, 451
MhlI GDGCHC 2 cut(s) 994, 1228
MluCI AATT 8 cut(s) 39, 301, 597, 668, 781, 1139, 1155, 1160
MlyI GAGTC 4 cut(s) 175, 386, 554, 567
MmeI TCCRAC 4 cut(s) 388, 399, 546, 1040
MroNI GCCGGC 1 cut(s) 214
MroXI GAANNNNTTC 2 cut(s) 182, 1047
MseI TTAA 5 cut(s) 38, 348, 738, 798, 1059
MspI CCGG 6 cut(s) 215, 227, 555, 770, 1025, 1456
MspR9I CCNGG 3 cut(s) 108, 255, 979
MvaI CCWGG 3 cut(s) 108, 255, 979
MwoI GCNNNNNNNGC 3 cut(s) 273, 861, 1115
NaeI GCCGGC 1 cut(s) 216
NcoI CCATGG 1 cut(s) 1325
NdeI CATATG 1 cut(s) 550
NdeII GATC 6 cut(s) 223, 451, 724, 1185, 1243, 1289
NgoMIV GCCGGC 1 cut(s) 214
NlaIII CATG 9 cut(s) 173, 293, 855, 1118, 1137, 1172, 1250, 1284, 1329
NlaIV GGNNCC 3 cut(s) 179, 225, 849
NmuCI GTSAC 1 cut(s) 151
NspV TTCGAA 1 cut(s) 1334
PagI TCATGA 2 cut(s) 1168, 1246
PdiI GCCGGC 1 cut(s) 216
PdmI GAANNNNTTC 2 cut(s) 182, 1047
PfeI GAWTC 6 cut(s) 103, 111, 200, 470, 869, 1172
PfoI TCCNGGA 1 cut(s) 106
PleI GAGTC 4 cut(s) 174, 386, 553, 566
PpsI GAGTC 4 cut(s) 174, 386, 553, 566
Ppu21I YACGTR 1 cut(s) 565
PshAI GACNNNNGTC 1 cut(s) 165
PshBI ATTAAT 2 cut(s) 38, 1059
PsiI TTATAA 1 cut(s) 1302
Psp124BI GAGCTC 1 cut(s) 994
Psp6I CCWGG 3 cut(s) 106, 253, 977
PspFI CCCAGC 4 cut(s) 5, 143, 539, 1349
PspGI CCWGG 3 cut(s) 106, 253, 977
PspN4I GGNNCC 3 cut(s) 179, 225, 849
PspPI GGNCC 2 cut(s) 251, 293
PsrI GAACNNNNNNTAC 4 cut(s) 170, 202, 603, 635
PsuI RGATCY 2 cut(s) 223, 451
RsaI GTAC 3 cut(s) 1193, 1355, 1424
RsaNI GTAC 3 cut(s) 1192, 1354, 1423
SacI GAGCTC 1 cut(s) 994
SaqAI TTAA 5 cut(s) 38, 348, 738, 798, 1059
Sau3AI GATC 6 cut(s) 223, 451, 724, 1185, 1243, 1289
Sau96I GGNCC 2 cut(s) 251, 293
SchI GAGTC 4 cut(s) 175, 386, 554, 567
ScrFI CCNGG 3 cut(s) 108, 255, 979
SduI GDGCHC 2 cut(s) 994, 1228
SfaNI GCATC 2 cut(s) 248, 592
SfuI TTCGAA 1 cut(s) 1334
SinI GGWCC 1 cut(s) 251
SmlI CTYRAG 2 cut(s) 52, 488
SmoI CTYRAG 2 cut(s) 52, 488
Sse9I AATT 8 cut(s) 39, 301, 597, 668, 781, 1139, 1155, 1160
SsiI CCGC 4 cut(s) 218, 750, 900, 1239
SspI AATATT 1 cut(s) 15
SspMI CTAG 2 cut(s) 912, 1287
SstI GAGCTC 1 cut(s) 994
StyD4I CCNGG 3 cut(s) 106, 253, 977
StyI CCWWGG 2 cut(s) 321, 1325
TaaI ACNGT 5 cut(s) 157, 924, 1099, 1393, 1414
TaiI ACGT 1 cut(s) 567
TaqI TCGA 6 cut(s) 198, 365, 672, 872, 919, 1334
TasI AATT 8 cut(s) 39, 301, 597, 668, 781, 1139, 1155, 1160
TatI WGTACW 1 cut(s) 1422
TfiI GAWTC 6 cut(s) 103, 111, 200, 470, 869, 1172
Tru1I TTAA 5 cut(s) 38, 348, 738, 798, 1059
Tru9I TTAA 5 cut(s) 38, 348, 738, 798, 1059
TscAI CASTG 3 cut(s) 121, 1213, 1273
TseFI GTSAC 1 cut(s) 151
Tsp45I GTSAC 1 cut(s) 151
TspDTI ATGAA 3 cut(s) 456, 1122, 1329
TspGWI ACGGA 5 cut(s) 674, 681, 1041, 1139, 1353
TspRI CASTG 3 cut(s) 121, 1213, 1273
VpaK11BI GGWCC 1 cut(s) 251
VspI ATTAAT 2 cut(s) 38, 1059
XapI RAATTY 2 cut(s) 668, 1160
XmiI GTMKAC 1 cut(s) 561
XmnI GAANNNNTTC 2 cut(s) 182, 1047
XspI CTAG 2 cut(s) 912, 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.