pycom12g23930

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
24360300 .. 24365007
4708 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g23930.9

Sequence Viewer

Length: 1536 bp
ATGTCGGCCATGGCCAAATTCTCAGTACTCTCACTCTGCTGCATGCTTTTTGTGAGTTTGGTCGTCATCATTGAGGCTGCCCCTCAAAGCTCTCTTGTCACTCATCTTCCTGGTTTTAATGCTAACTTTCCATCCAAGCACTACTCTGGATATATTAGCATAGATGGAAAGAATCTTTTCTATTACTTCGTAGTTTCAGAAAGGAACCCAGCAAGTGATCCGGTTGTTCTGTGGCTCAATGGTGGACCCGGCTGCTCTAGCTTCGACGGATTTGTCTATGAACATGGACCATTCAATTTTGCAGAAGGAAAACCTAAAGGAGCATTGCCTGTTTTGCATCTTAATCCTTATAGCTGGTCCAAGGTTTCCAACATAATTTATTTGGATTCTCCTGCTGGTGTTGGATTTTCTTACTCTCAAAACCAAACCAAATATATCACTGGGGATATCCAGACTGCTCTTGATACCCATGCCTTTCTCCTCCAATGGGTTCAGCAATTCCCAGAGTTTCAACCAAATCCGTTGTATATTTCGGGAGAGTCTTATGCTGGAGTCTACGTGCCAACTCTTGCTTCTCAAATTGCAAAAGGTATAAACAAAGGAACAAAACCAACTCTAAATCTCAAGGGTTACCTGGTGGGGAATGGAGTCACAGACCGAAGATTCGATAACAATGCTTTAGTTCCATTTGCTCATGGGATGGCTCTCATTTCAGATAAAATCTTTCAGGAAGTTGTTGCCACATGCGGTACTGACGTCCTTAATGTTCCTCCTTCCAATCGTAATCTATGCCATGAAAAATTTCAACCACTTTACAGGGCTATTGACGAACTAAACCTCTACGACATCCTTGAACCTTGTTACCATGGCCCCGGAGCTGATAATAACAAAAATTCCAAAGAAAATAAAACAAGCAGCTTACCGTTGAGCTTTCAGCAATTGGGGAAGACGACAGAGAAGCCTCTGGGAGTGAGGAAAAGGATGTTTGGCCGAGCTTGGCCTTTTCGAGCAAACGTAGAAGATGGCATTGTCCCATCATGGCCTCAGCTCGCAAAGACACTGGATTCCAGTGTTCATTGTATCAATGATGAAGTTGCAACGCTATGGCTGAACACTCCAGAAGTTAGGGAAGCAATTCATGCACAACCAGAAAGTGTGACTGGTCCATGGGAGTTATGCACAGATAGAATAAGTTATTCACACGATGCTGGAAGCATGATACCTTACCACCAAAATCTTACAACCCAAGGTTACAGAGCACTTATTTACAGTGGAGACCATGATATGTGTGTTCCGTACACTGGAAGCGAGGCATGGACTGCATCACTTGGGTATAAGATTGTAGATGAATGGAGACCTTGGTTCTCCTCTGACAACCAAGTTGCCGGCTACTTACAAGGATATGCCAACAGCCTCACCTTTCTCACCATCAAGGTCTCTGGTCGCTCCACTGGAGCTGGACACACTGTCGCAGAGTACAAGCCGCGGGAGGCACTCGACTTCTTCCAACGCTTTTTGGGCGGAAAACGCATTTGA

Protein Analysis

512

Amino Acids

56.64

Weight (kDa)

6.4

Isoelectric Point (pI)

34.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 272
AatII GACGTC 1 cut(s) 759
AccI GTMKAC 1 cut(s) 555
AccII CGCG 1 cut(s) 1486
AciI CCGC 4 cut(s) 747, 1484, 1486, 1521
AclWI GGATC 1 cut(s) 212
AcoI YGGCCR 3 cut(s) 6, 12, 988
AcsI RAATTY 3 cut(s) 17, 800, 892
AcyI GRCGYC 1 cut(s) 756
AfaI GTAC 4 cut(s) 27, 751, 1298, 1478
AfiI CCNNNNNNNGG 2 cut(s) 487, 1301
AgsI TTSAA 4 cut(s) 295, 512, 806, 854
AhdI GACNNNNNGTC 1 cut(s) 1466
AjnI CCWGG 2 cut(s) 109, 633
AjuI GAANNNNNNNTTGG 2 cut(s) 556, 588
AluBI AGCT 9 cut(s) 90, 261, 354, 878, 918, 930, 995, 1048, 1457
AluI AGCT 9 cut(s) 90, 261, 354, 878, 918, 930, 995, 1048, 1457
Alw21I GWGCWC 1 cut(s) 1261
Alw26I GTCTC 3 cut(s) 1269, 1348, 1441
AlwI GGATC 1 cut(s) 212
AoxI GGCC 6 cut(s) 6, 12, 868, 988, 998, 1040
ApeKI GCWGC 4 cut(s) 39, 77, 252, 915
ApoI RAATTY 3 cut(s) 17, 800, 892
ArsI GACNNNNNNTTYG 2 cut(s) 647, 679
Asp700I GAANNNNTTC 3 cut(s) 176, 801, 1134
AspS9I GGNCC 5 cut(s) 245, 287, 357, 869, 1163
AsuC2I CCSGG 2 cut(s) 249, 873
AsuHPI GGTGA 2 cut(s) 1408, 1417
AvaII GGWCC 4 cut(s) 245, 287, 357, 1163
BaeI ACNNNNGTAYC 2 cut(s) 741, 774
BalI TGGCCA 1 cut(s) 14
BbsI GAAGAC 1 cut(s) 953
Bbv12I GWGCWC 1 cut(s) 1261
BbvCI CCTCAGC 1 cut(s) 1044
BbvI GCAGC 4 cut(s) 26, 64, 239, 927
BccI CCATC 6 cut(s) 139, 158, 694, 1016, 1042, 1436
BcgI CGANNNNNNTGC 2 cut(s) 656, 690
BciT130I CCWGG 2 cut(s) 111, 635
BcnI CCSGG 2 cut(s) 249, 873
BcoDI GTCTC 3 cut(s) 1269, 1348, 1441
BfaI CTAG 1 cut(s) 258
BisI GCNGC 5 cut(s) 40, 78, 253, 916, 1484
BlsI GCNGC 5 cut(s) 41, 79, 254, 917, 1485
BmcAI AGTACT 1 cut(s) 27
Bme1390I CCNGG 4 cut(s) 111, 249, 635, 873
Bme18I GGWCC 4 cut(s) 245, 287, 357, 1163
BmeRI GACNNNNNGTC 1 cut(s) 1466
BmgT120I GGNCC 5 cut(s) 245, 287, 357, 869, 1163
BmiI GGNNCC 3 cut(s) 206, 247, 871
BmrFI CCNGG 4 cut(s) 111, 249, 635, 873
BmrI ACTGGG 1 cut(s) 450
BmsI GCATC 3 cut(s) 346, 1195, 1331
BmuI ACTGGG 1 cut(s) 450
BpiI GAAGAC 1 cut(s) 953
BpmI CTGGAG 3 cut(s) 570, 1101, 1473
Bpu10I CCTNAGC 1 cut(s) 1044
BpuEI CTTGAG 1 cut(s) 608
BpuMI CCSGG 2 cut(s) 249, 873
BsaAI YACGTR 1 cut(s) 559
BsaHI GRCGYC 1 cut(s) 756
BsaI GGTCTC 3 cut(s) 1269, 1348, 1441
BsaJI CCNNGG 8 cut(s) 9, 360, 865, 871, 1166, 1246, 1358, 1484
BsaWI WCCGGW 1 cut(s) 220
BsaXI ACNNNNNCTCC 2 cut(s) 543, 573
Bsc4I CCNNNNNNNGG 2 cut(s) 487, 1301
Bse118I RCCGGY 1 cut(s) 1385
Bse1I ACTGG 6 cut(s) 445, 1065, 1068, 1165, 1306, 1456
Bse3DI GCAATG 1 cut(s) 323
BseBI CCWGG 2 cut(s) 111, 635
BseDI CCNNGG 8 cut(s) 9, 360, 865, 871, 1166, 1246, 1358, 1484
BseGI GGATG 4 cut(s) 131, 705, 846, 987
BseLI CCNNNNNNNGG 2 cut(s) 487, 1301
BseMI GCAATG 1 cut(s) 323
BseMII CTCAG 2 cut(s) 36, 1058
BseNI ACTGG 6 cut(s) 445, 1065, 1068, 1165, 1306, 1456
BseRI GAGGAG 2 cut(s) 470, 1357
BseXI GCAGC 4 cut(s) 26, 64, 239, 927
BseYI CCCAGC 1 cut(s) 208
Bsh1236I CGCG 1 cut(s) 1486
BshFI GGCC 6 cut(s) 8, 14, 870, 990, 1000, 1042
BsiHKAI GWGCWC 1 cut(s) 1261
BsiSI CCGG 4 cut(s) 221, 249, 873, 1386
BslFI GGGAC 1 cut(s) 1016
BslI CCNNNNNNNGG 2 cut(s) 487, 1301
BsmAI GTCTC 3 cut(s) 1269, 1348, 1441
BsmFI GGGAC 1 cut(s) 1016
BsnI GGCC 6 cut(s) 8, 14, 870, 990, 1000, 1042
Bso31I GGTCTC 3 cut(s) 1269, 1348, 1441
Bsp1286I GDGCHC 1 cut(s) 1261
Bsp143I GATC 1 cut(s) 217
Bsp19I CCATGG 3 cut(s) 9, 865, 1166
BspACI CCGC 4 cut(s) 747, 1484, 1486, 1521
BspANI GGCC 6 cut(s) 8, 14, 870, 990, 1000, 1042
BspCNI CTCAG 2 cut(s) 35, 1057
BspFNI CGCG 1 cut(s) 1486
BspLI GGNNCC 3 cut(s) 206, 247, 871
BspPI GGATC 1 cut(s) 212
BspTNI GGTCTC 3 cut(s) 1269, 1348, 1441
BsrDI GCAATG 1 cut(s) 323
BsrFI RCCGGY 1 cut(s) 1385
BsrI ACTGG 6 cut(s) 445, 1065, 1068, 1165, 1306, 1456
BssAI RCCGGY 1 cut(s) 1385
BssECI CCNNGG 8 cut(s) 9, 360, 865, 871, 1166, 1246, 1358, 1484
BssMI GATC 1 cut(s) 217
BssNI GRCGYC 1 cut(s) 756
BssT1I CCWWGG 6 cut(s) 9, 360, 865, 1166, 1246, 1358
Bst2UI CCWGG 2 cut(s) 111, 635
Bst4CI ACNGT 3 cut(s) 924, 1271, 1468
BstACI GRCGYC 1 cut(s) 756
BstAPI GCANNNNNTGC 2 cut(s) 1139, 1319
BstBAI YACGTR 1 cut(s) 559
BstC8I GCNNGC 3 cut(s) 44, 1050, 1387
BstDEI CTNAG 2 cut(s) 22, 1044
BstDSI CCRYGG 4 cut(s) 9, 865, 1166, 1484
BstEII GGTNACC 1 cut(s) 629
BstF5I GGATG 4 cut(s) 131, 705, 846, 987
BstFNI CGCG 1 cut(s) 1486
BstKTI GATC 1 cut(s) 220
BstMAI GTCTC 3 cut(s) 1269, 1348, 1441
BstMBI GATC 1 cut(s) 217
BstMWI GCNNNNNNNGC 6 cut(s) 258, 334, 1139, 1319, 1518, 1527
BstNI CCWGG 2 cut(s) 111, 635
BstNSI RCATGY 2 cut(s) 46, 747
BstPI GGTNACC 1 cut(s) 629
BstSCI CCNGG 4 cut(s) 109, 247, 633, 871
BstUI CGCG 1 cut(s) 1486
BstV1I GCAGC 4 cut(s) 26, 64, 239, 927
BstV2I GAAGAC 1 cut(s) 953
BsuRI GGCC 6 cut(s) 8, 14, 870, 990, 1000, 1042
BtgI CCRYGG 4 cut(s) 9, 865, 1166, 1484
BtsCI GGATG 4 cut(s) 131, 705, 846, 987
BtsIMutI CAGTG 7 cut(s) 438, 1058, 1075, 1276, 1299, 1449, 1464
Cac8I GCNNGC 3 cut(s) 44, 1050, 1387
Cfr10I RCCGGY 1 cut(s) 1385
Cfr13I GGNCC 5 cut(s) 245, 287, 357, 869, 1163
Cfr42I CCGCGG 1 cut(s) 1487
CsiI ACCWGGT 1 cut(s) 633
Csp6I GTAC 4 cut(s) 26, 750, 1297, 1477
CviQI GTAC 4 cut(s) 26, 750, 1297, 1477
DdeI CTNAG 2 cut(s) 22, 1044
DpnI GATC 1 cut(s) 219
DpnII GATC 1 cut(s) 217
DrdI GACNNNNNNGTC 1 cut(s) 272
DriI GACNNNNNGTC 1 cut(s) 1466
DseDI GACNNNNNNGTC 1 cut(s) 272
EaeI YGGCCR 3 cut(s) 6, 12, 988
Eam1105I GACNNNNNGTC 1 cut(s) 1466
EciI GGCGGA 1 cut(s) 1536
Eco130I CCWWGG 6 cut(s) 9, 360, 865, 1166, 1246, 1358
Eco31I GGTCTC 3 cut(s) 1269, 1348, 1441
Eco32I GATATC 1 cut(s) 448
Eco47I GGWCC 4 cut(s) 245, 287, 357, 1163
Eco91I GGTNACC 1 cut(s) 629
EcoO65I GGTNACC 1 cut(s) 629
EcoRII CCWGG 2 cut(s) 109, 633
EcoRV GATATC 1 cut(s) 448
EcoT14I CCWWGG 6 cut(s) 9, 360, 865, 1166, 1246, 1358
ErhI CCWWGG 6 cut(s) 9, 360, 865, 1166, 1246, 1358
FaqI GGGAC 1 cut(s) 1016
FauI CCCGC 1 cut(s) 1479
FblI GTMKAC 1 cut(s) 555
Fnu4HI GCNGC 5 cut(s) 40, 78, 253, 916, 1484
FokI GGATG 4 cut(s) 118, 712, 833, 994
Fsp4HI GCNGC 5 cut(s) 40, 78, 253, 916, 1484
FspBI CTAG 1 cut(s) 258
GluI GCNGC 5 cut(s) 40, 78, 253, 916, 1484
GsaI CCCAGC 1 cut(s) 212
GsuI CTGGAG 3 cut(s) 570, 1101, 1473
HaeIII GGCC 6 cut(s) 8, 14, 870, 990, 1000, 1042
HapII CCGG 4 cut(s) 221, 249, 873, 1386
Hin1I GRCGYC 1 cut(s) 756
HinfI GANTC 7 cut(s) 172, 386, 539, 552, 648, 663, 1064
HpaII CCGG 4 cut(s) 221, 249, 873, 1386
HphI GGTGA 2 cut(s) 1408, 1417
Hpy166II GTNNAC 3 cut(s) 245, 556, 1299
Hpy188I TCNGA 3 cut(s) 199, 715, 1372
Hpy188III TCNNGA 6 cut(s) 147, 451, 461, 534, 728, 1118
Hpy8I GTNNAC 3 cut(s) 245, 556, 1299
Hpy99I CGWCG 1 cut(s) 269
HpyAV CCTTC 2 cut(s) 299, 783
HpyCH4III ACNGT 3 cut(s) 924, 1271, 1468
HpyCH4IV ACGT 3 cut(s) 558, 756, 1014
HpyCH4V TGCA 8 cut(s) 42, 302, 337, 584, 1097, 1142, 1179, 1322
HpyF10VI GCNNNNNNNGC 6 cut(s) 258, 334, 1139, 1319, 1518, 1527
HpyF3I CTNAG 2 cut(s) 22, 1044
HpySE526I ACGT 3 cut(s) 558, 756, 1014
Hsp92I GRCGYC 1 cut(s) 756
KroI GCCGGC 1 cut(s) 1385
KroNI GCCGGC 1 cut(s) 1387
KspI CCGCGG 1 cut(s) 1487
Kzo9I GATC 1 cut(s) 217
LmnI GCTCC 4 cut(s) 320, 875, 1451, 1454
Lsp1109I GCAGC 4 cut(s) 26, 64, 239, 927
LweI GCATC 3 cut(s) 346, 1195, 1331
MabI ACCWGGT 1 cut(s) 633
MaeI CTAG 1 cut(s) 258
MaeII ACGT 3 cut(s) 558, 756, 1014
MaeIII GTNAC 6 cut(s) 97, 629, 649, 860, 1156, 1250
MalI GATC 1 cut(s) 219
MboI GATC 1 cut(s) 217
MboII GAAGA 5 cut(s) 98, 672, 958, 1031, 1495
MfeI CAATTG 1 cut(s) 938
MhlI GDGCHC 1 cut(s) 1261
MlsI TGGCCA 1 cut(s) 14
MluCI AATT 9 cut(s) 17, 295, 375, 497, 579, 800, 892, 938, 1134
MluNI TGGCCA 1 cut(s) 14
MlyI GAGTC 3 cut(s) 548, 561, 657
MmeI TCCRAC 3 cut(s) 382, 393, 1531
Mox20I TGGCCA 1 cut(s) 14
MroNI GCCGGC 1 cut(s) 1385
MroXI GAANNNNTTC 3 cut(s) 176, 801, 1134
MscI TGGCCA 1 cut(s) 14
MseI TTAA 3 cut(s) 117, 342, 762
Msp20I TGGCCA 1 cut(s) 14
MspA1I CMGCKG 1 cut(s) 1486
MspI CCGG 4 cut(s) 221, 249, 873, 1386
MspR9I CCNGG 4 cut(s) 111, 249, 635, 873
MunI CAATTG 1 cut(s) 938
MvaI CCWGG 2 cut(s) 111, 635
MvnI CGCG 1 cut(s) 1486
MwoI GCNNNNNNNGC 6 cut(s) 258, 334, 1139, 1319, 1518, 1527
NaeI GCCGGC 1 cut(s) 1387
NciI CCSGG 2 cut(s) 249, 873
NcoI CCATGG 3 cut(s) 9, 865, 1166
NdeII GATC 1 cut(s) 217
NgoMIV GCCGGC 1 cut(s) 1385
NlaIV GGNNCC 3 cut(s) 206, 247, 871
NmeAIII GCCGAG 1 cut(s) 1016
NmuCI GTSAC 3 cut(s) 97, 649, 1156
NspI RCATGY 2 cut(s) 46, 747
PaeI GCATGC 1 cut(s) 46
PdiI GCCGGC 1 cut(s) 1387
PdmI GAANNNNTTC 3 cut(s) 176, 801, 1134
PfeI GAWTC 4 cut(s) 172, 386, 663, 1064
PkrI GCNGC 5 cut(s) 41, 79, 254, 917, 1485
PleI GAGTC 3 cut(s) 547, 560, 656
PpsI GAGTC 3 cut(s) 547, 560, 656
Ppu21I YACGTR 1 cut(s) 559
Psp6I CCWGG 2 cut(s) 109, 633
PspEI GGTNACC 1 cut(s) 629
PspFI CCCAGC 1 cut(s) 208
PspGI CCWGG 2 cut(s) 109, 633
PspN4I GGNNCC 3 cut(s) 206, 247, 871
PspPI GGNCC 5 cut(s) 245, 287, 357, 869, 1163
RsaI GTAC 4 cut(s) 27, 751, 1298, 1478
RsaNI GTAC 4 cut(s) 26, 750, 1297, 1477
SacII CCGCGG 1 cut(s) 1487
SaqAI TTAA 3 cut(s) 117, 342, 762
SatI GCNGC 5 cut(s) 40, 78, 253, 916, 1484
Sau3AI GATC 1 cut(s) 217
Sau96I GGNCC 5 cut(s) 245, 287, 357, 869, 1163
ScaI AGTACT 1 cut(s) 27
SchI GAGTC 3 cut(s) 548, 561, 657
ScrFI CCNGG 4 cut(s) 111, 249, 635, 873
SduI GDGCHC 1 cut(s) 1261
SexAI ACCWGGT 1 cut(s) 633
SfaNI GCATC 3 cut(s) 346, 1195, 1331
Sfr303I CCGCGG 1 cut(s) 1487
SgrBI CCGCGG 1 cut(s) 1487
SinI GGWCC 4 cut(s) 245, 287, 357, 1163
SmlI CTYRAG 1 cut(s) 623
SmoI CTYRAG 1 cut(s) 623
SphI GCATGC 1 cut(s) 46
Sse9I AATT 9 cut(s) 17, 295, 375, 497, 579, 800, 892, 938, 1134
SsiI CCGC 4 cut(s) 747, 1484, 1486, 1521
SspMI CTAG 1 cut(s) 258
StyD4I CCNGG 4 cut(s) 109, 247, 633, 871
StyI CCWWGG 6 cut(s) 9, 360, 865, 1166, 1246, 1358
TaaI ACNGT 3 cut(s) 924, 1271, 1468
TaiI ACGT 3 cut(s) 561, 759, 1017
TaqI TCGA 4 cut(s) 264, 666, 1006, 1497
TaqII GACCGA 1 cut(s) 672
TasI AATT 9 cut(s) 17, 295, 375, 497, 579, 800, 892, 938, 1134
TatI WGTACW 2 cut(s) 25, 1476
TauI GCSGC 1 cut(s) 1486
TfiI GAWTC 4 cut(s) 172, 386, 663, 1064
Tru1I TTAA 3 cut(s) 117, 342, 762
Tru9I TTAA 3 cut(s) 117, 342, 762
TscAI CASTG 7 cut(s) 445, 1065, 1075, 1276, 1306, 1456, 1471
TseFI GTSAC 3 cut(s) 97, 649, 1156
TseI GCWGC 4 cut(s) 39, 77, 252, 915
Tsp45I GTSAC 3 cut(s) 97, 649, 1156
TspDTI ATGAA 6 cut(s) 294, 810, 1064, 1104, 1127, 1362
TspGWI ACGGA 3 cut(s) 282, 510, 1284
TspRI CASTG 7 cut(s) 445, 1065, 1075, 1276, 1306, 1456, 1471
VpaK11BI GGWCC 4 cut(s) 245, 287, 357, 1163
XapI RAATTY 3 cut(s) 17, 800, 892
XceI RCATGY 2 cut(s) 46, 747
XmiI GTMKAC 1 cut(s) 555
XmnI GAANNNNTTC 3 cut(s) 176, 801, 1134
XspI CTAG 1 cut(s) 258
ZraI GACGTC 1 cut(s) 757
ZrmI AGTACT 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.