pycom10g13030

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
16506868 .. 16510245
3378 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g13030.5

Sequence Viewer

Length: 1485 bp
ATGGCTGGGGGAGTATTATATTTATTTTTTGTGCCATTAATTTACGCCTTCTTGAGCATTTTGCCAACCCAATCAGCTCCTCAATCTGCACTCGTAACCCAGATTCCTGGATTCAGTGGCACTCTTCCTTCAAAACACTATGCTGGGTATGTGACAGTTGACCAGAGTCATGGGAGGAACCTGTTCTACTATTTCGTCGAATCAGAAGGGAAGCCGGCGGAGGATCCGGTGGTTCTGTGGCTTAATGGTGGACCTGGATGCTCCAGCTTTGATGGCTTTGTTTATGAGCATGGGCCATTCAATTTTGAAAAGGCCATGACCAAGGGAAGTCTGCTCCAACTCCAACTTAATCCATATAGCTGGTCGAAGGTTTCCAACATTATATATCTGGACTCTCCTGCTGGTGTTGGATTTTCTTACTCAAAAAATGAGACTGACTATGAAACTGGGGATCTAAAGACTGCCTCTGATTCCCACACATTTCTCCTCAAGTGGTTTGAACTTTACCCTGAGTTCCTCTCCAACCCATTTTTTATTGCTGGGGAGTCATATGCCGGGGTCTACGTGCCGACGCTTTCTTCTGAAGTAGTGAAAGGAATTGATGCTGGTGTAACGCCTGTTCTCAACTTCAAGGGTTATCTGGTGGGAAATGGCGTTACGGATGATAAATTCGATGGTAACGCTCTTGTTCCGTTTGCACACGGGATGGGACTGATATCAGACGATCTATATGAGGAGGTTAACAAGGCGTGCGGAGGAAACTACATTTATCCGGTGAATGATACTTGTGGGAGCAAGCTTGAAAAAGTTGACAAGAACATAGAAGATTTGAACATATATGACATTCTGGAACCATGCTATCACAGCACAGATTCGAGTAAGAACAGAAAAGTTACAAAGAGCGGATTGCCATCTAGCTTTCGACGGTTGGGTGAAACTGAAAGGCCACTTGCTGTCAGAAAAAGAATGTTTGGTCGTGCCTGGCCTCTTAGAGCTCCTGTGAGGGATGGTATTGTTCCAACTTGGCCGGAGCTGATGGATAATGAAAGTGTTCCGTGTATTAATGATGAGGTTGCTACTGAATGGTTGAACAATGAATCTGTTAGGAAGGCAATCCATGCAGAAACGGATTTTTCATGGGAATTATGCACAAGCAGAATCGAATTTTATCATGATTCTGGAAGTATGATCAAGTACCACATGAACCTCACTGCAAAGGGTTATCGGGCACTTATATATAGTGGTGATCATGATATGTGTGTTCCTTTCACTGGGAGTGAAGCATGGACTAGATCACTTGGTTATAAGATTGTGGATGAATGGAGGCCATGGACTTCGAACGGACAAGTTGCTGGGTACACGCAGGGTTATGAGAATAACCTCACCTTTCTAACTGTAAAGGGGTCTGGACATACAGTTCCGGAGTACAAACCACGAGAGGCGTTTGATTTGTTTAGCCGGTTTTTGGCTGGAAAACCACAATAA

Protein Analysis

495

Amino Acids

55.16

Weight (kDa)

5.26

Isoelectric Point (pI)

39.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1305
AccBSI CCGCTC 1 cut(s) 903
AccI GTMKAC 1 cut(s) 561
AccIII TCCGGA 1 cut(s) 1420
AciI CCGC 3 cut(s) 218, 753, 903
AclWI GGATC 3 cut(s) 218, 231, 459
AcoI YGGCCR 1 cut(s) 1025
AcsI RAATTY 2 cut(s) 668, 1163
AcuI CTGAAG 1 cut(s) 603
AfaI GTAC 3 cut(s) 1196, 1358, 1427
AfiI CCNNNNNNNGG 2 cut(s) 1271, 1465
AgsI TTSAA 8 cut(s) 132, 301, 308, 500, 631, 803, 832, 1090
AjnI CCWGG 3 cut(s) 106, 253, 980
AloI GAACNNNNNNTCC 2 cut(s) 1401, 1433
AluBI AGCT 7 cut(s) 77, 267, 360, 799, 918, 995, 1033
AluI AGCT 7 cut(s) 77, 267, 360, 799, 918, 995, 1033
Alw21I GWGCWC 1 cut(s) 997
Alw26I GTCTC 1 cut(s) 425
AlwI GGATC 3 cut(s) 218, 231, 459
Aor13HI TCCGGA 1 cut(s) 1420
AoxI GGCC 6 cut(s) 293, 312, 944, 983, 1025, 1325
ApoI RAATTY 2 cut(s) 668, 1163
AseI ATTAAT 2 cut(s) 38, 1062
Asp700I GAANNNNTTC 2 cut(s) 182, 1050
AspS9I GGNCC 2 cut(s) 251, 293
AsuC2I CCSGG 1 cut(s) 556
AsuHPI GGTGA 4 cut(s) 787, 944, 1256, 1375
AsuII TTCGAA 1 cut(s) 1337
AvaII GGWCC 1 cut(s) 251
BaeGI GKGCMC 1 cut(s) 1231
BamHI GGATCC 1 cut(s) 223
BanII GRGCYC 1 cut(s) 997
BauI CACGAG 1 cut(s) 1434
Bbv12I GWGCWC 1 cut(s) 997
BccI CCATC 6 cut(s) 266, 668, 700, 919, 1001, 1030
BciT130I CCWGG 3 cut(s) 108, 255, 982
BclI TGATCA 2 cut(s) 1188, 1246
BcnI CCSGG 1 cut(s) 556
BcoDI GTCTC 1 cut(s) 425
BfaI CTAG 2 cut(s) 915, 1290
Bme1390I CCNGG 4 cut(s) 108, 255, 556, 982
Bme18I GGWCC 1 cut(s) 251
BmgT120I GGNCC 2 cut(s) 251, 293
BmiI GGNNCC 3 cut(s) 179, 225, 852
BmrFI CCNGG 4 cut(s) 108, 255, 556, 982
BmrI ACTGGG 2 cut(s) 456, 1281
BmsI GCATC 2 cut(s) 248, 592
BmuI ACTGGG 2 cut(s) 456, 1281
BoxI GACNNNNGTC 1 cut(s) 165
BplI GAGNNNNNCTC 2 cut(s) 503, 535
BpmI CTGGAG 1 cut(s) 247
Bpu14I TTCGAA 1 cut(s) 1337
BpuEI CTTGAG 2 cut(s) 73, 473
BpuMI CCSGG 1 cut(s) 556
BsaAI YACGTR 1 cut(s) 565
BsaBI GATNNNNATC 1 cut(s) 910
BsaJI CCNNGG 3 cut(s) 321, 555, 1328
BsaWI WCCGGW 3 cut(s) 226, 772, 1420
Bsc4I CCNNNNNNNGG 2 cut(s) 1271, 1465
Bse118I RCCGGY 2 cut(s) 214, 1458
Bse1I ACTGG 2 cut(s) 451, 1276
Bse8I GATNNNNATC 1 cut(s) 910
BseAI TCCGGA 1 cut(s) 1420
BseBI CCWGG 3 cut(s) 108, 255, 982
BseDI CCNNGG 3 cut(s) 321, 555, 1328
BseGI GGATG 5 cut(s) 263, 667, 711, 1012, 1321
BseJI GATNNNNATC 1 cut(s) 910
BseLI CCNNNNNNNGG 2 cut(s) 1271, 1465
BseMII CTCAG 1 cut(s) 501
BseNI ACTGG 2 cut(s) 451, 1276
BseRI GAGGAG 3 cut(s) 69, 476, 749
BseSI GKGCMC 1 cut(s) 1231
BseYI CCCAGC 4 cut(s) 5, 143, 539, 1352
BsgI GTGCAG 1 cut(s) 72
BshFI GGCC 6 cut(s) 295, 314, 946, 985, 1027, 1327
BsiHKAI GWGCWC 1 cut(s) 997
BsiSI CCGG 7 cut(s) 215, 227, 555, 773, 1028, 1421, 1459
BslFI GGGAC 1 cut(s) 723
BslI CCNNNNNNNGG 2 cut(s) 1271, 1465
BsmAI GTCTC 1 cut(s) 425
BsmFI GGGAC 1 cut(s) 723
BsnI GGCC 6 cut(s) 295, 314, 946, 985, 1027, 1327
Bsp119I TTCGAA 1 cut(s) 1337
Bsp1286I GDGCHC 2 cut(s) 997, 1231
Bsp13I TCCGGA 1 cut(s) 1420
Bsp143I GATC 6 cut(s) 223, 451, 724, 1188, 1246, 1292
Bsp19I CCATGG 1 cut(s) 1328
BspACI CCGC 3 cut(s) 218, 753, 903
BspANI GGCC 6 cut(s) 295, 314, 946, 985, 1027, 1327
BspCNI CTCAG 1 cut(s) 502
BspEI TCCGGA 1 cut(s) 1420
BspHI TCATGA 2 cut(s) 1171, 1249
BspLI GGNNCC 3 cut(s) 179, 225, 852
BspPI GGATC 3 cut(s) 218, 231, 459
BspT104I TTCGAA 1 cut(s) 1337
BsrBI CCGCTC 1 cut(s) 903
BsrFI RCCGGY 2 cut(s) 214, 1458
BsrI ACTGG 2 cut(s) 451, 1276
BssAI RCCGGY 2 cut(s) 214, 1458
BssECI CCNNGG 3 cut(s) 321, 555, 1328
BssMI GATC 6 cut(s) 223, 451, 724, 1188, 1246, 1292
BssSI CACGAG 1 cut(s) 1434
BssT1I CCWWGG 2 cut(s) 321, 1328
Bst2BI CACGAG 1 cut(s) 1434
Bst2UI CCWGG 3 cut(s) 108, 255, 982
Bst4CI ACNGT 4 cut(s) 157, 927, 1396, 1417
Bst6I CTCTTC 1 cut(s) 129
BstAPI GCANNNNNTGC 1 cut(s) 1118
BstBAI YACGTR 1 cut(s) 565
BstBI TTCGAA 1 cut(s) 1337
BstC8I GCNNGC 3 cut(s) 216, 751, 797
BstDEI CTNAG 2 cut(s) 510, 989
BstDSI CCRYGG 1 cut(s) 1328
BstF5I GGATG 5 cut(s) 263, 667, 711, 1012, 1321
BstKTI GATC 6 cut(s) 226, 454, 727, 1191, 1249, 1295
BstMAI GTCTC 1 cut(s) 425
BstMBI GATC 6 cut(s) 223, 451, 724, 1188, 1246, 1292
BstMWI GCNNNNNNNGC 3 cut(s) 273, 864, 1118
BstNI CCWGG 3 cut(s) 108, 255, 982
BstPAI GACNNNNGTC 1 cut(s) 165
BstSCI CCNGG 4 cut(s) 106, 253, 554, 980
BstSLI GKGCMC 1 cut(s) 1231
BstX2I RGATCY 2 cut(s) 223, 451
BstXI CCANNNNNNTGG 3 cut(s) 107, 170, 360
BstYI RGATCY 2 cut(s) 223, 451
BsuRI GGCC 6 cut(s) 295, 314, 946, 985, 1027, 1327
BtgI CCRYGG 1 cut(s) 1328
BtsCI GGATG 5 cut(s) 263, 667, 711, 1012, 1321
BtsI GCAGTG 1 cut(s) 1209
BtsIMutI CAGTG 3 cut(s) 121, 1209, 1269
Cac8I GCNNGC 3 cut(s) 216, 751, 797
CciI TCATGA 2 cut(s) 1171, 1249
Cfr10I RCCGGY 2 cut(s) 214, 1458
Cfr13I GGNCC 2 cut(s) 251, 293
CseI GACGC 1 cut(s) 580
Csp6I GTAC 3 cut(s) 1195, 1357, 1426
CviQI GTAC 3 cut(s) 1195, 1357, 1426
DdeI CTNAG 2 cut(s) 510, 989
DpnI GATC 6 cut(s) 225, 453, 726, 1190, 1248, 1294
DpnII GATC 6 cut(s) 223, 451, 724, 1188, 1246, 1292
EaeI YGGCCR 1 cut(s) 1025
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
EciI GGCGGA 1 cut(s) 233
Ecl136II GAGCTC 1 cut(s) 995
Eco130I CCWWGG 2 cut(s) 321, 1328
Eco24I GRGCYC 1 cut(s) 997
Eco32I GATATC 1 cut(s) 717
Eco47I GGWCC 1 cut(s) 251
Eco53kI GAGCTC 1 cut(s) 995
Eco57I CTGAAG 1 cut(s) 603
EcoICRI GAGCTC 1 cut(s) 995
EcoRII CCWGG 3 cut(s) 106, 253, 980
EcoRV GATATC 1 cut(s) 717
EcoT14I CCWWGG 2 cut(s) 321, 1328
EcoT38I GRGCYC 1 cut(s) 997
ErhI CCWWGG 2 cut(s) 321, 1328
FaqI GGGAC 1 cut(s) 723
FauNDI CATATG 1 cut(s) 550
FbaI TGATCA 2 cut(s) 1188, 1246
FblI GTMKAC 1 cut(s) 561
FokI GGATG 5 cut(s) 270, 674, 718, 1019, 1328
FriOI GRGCYC 1 cut(s) 997
FspBI CTAG 2 cut(s) 915, 1290
GsaI CCCAGC 4 cut(s) 9, 147, 543, 1356
GsuI CTGGAG 1 cut(s) 247
HaeIII GGCC 6 cut(s) 295, 314, 946, 985, 1027, 1327
HapII CCGG 7 cut(s) 215, 227, 555, 773, 1028, 1421, 1459
HgaI GACGC 1 cut(s) 580
HincII GTYRAC 3 cut(s) 160, 742, 811
HindII GTYRAC 3 cut(s) 160, 742, 811
HindIII AAGCTT 1 cut(s) 797
HpaI GTTAAC 1 cut(s) 742
HpaII CCGG 7 cut(s) 215, 227, 555, 773, 1028, 1421, 1459
HphI GGTGA 4 cut(s) 787, 944, 1256, 1375
Hpy166II GTNNAC 6 cut(s) 160, 251, 562, 742, 811, 1359
Hpy188I TCNGA 5 cut(s) 205, 469, 583, 721, 959
Hpy188III TCNNGA 8 cut(s) 52, 389, 848, 1172, 1179, 1250, 1407, 1421
Hpy8I GTNNAC 6 cut(s) 160, 251, 562, 742, 811, 1359
Hpy99I CGWCG 3 cut(s) 200, 574, 927
HpyAV CCTTC 5 cut(s) 58, 138, 200, 361, 1102
HpyCH4III ACNGT 4 cut(s) 157, 927, 1396, 1417
HpyCH4IV ACGT 1 cut(s) 564
HpyCH4V TGCA 5 cut(s) 89, 698, 1121, 1149, 1214
HpyF10VI GCNNNNNNNGC 3 cut(s) 273, 864, 1118
HpyF3I CTNAG 2 cut(s) 510, 989
HpySE526I ACGT 1 cut(s) 564
Kpn2I TCCGGA 1 cut(s) 1420
KroI GCCGGC 1 cut(s) 214
KroNI GCCGGC 1 cut(s) 216
Ksp22I TGATCA 2 cut(s) 1188, 1246
KspAI GTTAAC 1 cut(s) 742
Kzo9I GATC 6 cut(s) 223, 451, 724, 1188, 1246, 1292
LmnI GCTCC 6 cut(s) 82, 266, 339, 792, 1000, 1030
LweI GCATC 2 cut(s) 248, 592
MaeI CTAG 2 cut(s) 915, 1290
MaeII ACGT 1 cut(s) 564
MaeIII GTNAC 6 cut(s) 94, 151, 610, 655, 677, 892
MalI GATC 6 cut(s) 225, 453, 726, 1190, 1248, 1294
MbiI CCGCTC 1 cut(s) 903
MboI GATC 6 cut(s) 223, 451, 724, 1188, 1246, 1292
MboII GAAGA 3 cut(s) 116, 570, 836
MflI RGATCY 2 cut(s) 223, 451
MhlI GDGCHC 2 cut(s) 997, 1231
MluCI AATT 6 cut(s) 39, 301, 597, 668, 1142, 1163
MlyI GAGTC 3 cut(s) 175, 386, 554
MmeI TCCRAC 6 cut(s) 361, 367, 388, 399, 546, 1043
MroI TCCGGA 1 cut(s) 1420
MroNI GCCGGC 1 cut(s) 214
MroXI GAANNNNTTC 2 cut(s) 182, 1050
MseI TTAA 5 cut(s) 38, 243, 348, 741, 1062
MspI CCGG 7 cut(s) 215, 227, 555, 773, 1028, 1421, 1459
MspR9I CCNGG 4 cut(s) 108, 255, 556, 982
MvaI CCWGG 3 cut(s) 108, 255, 982
MwoI GCNNNNNNNGC 3 cut(s) 273, 864, 1118
NaeI GCCGGC 1 cut(s) 216
NciI CCSGG 1 cut(s) 556
NcoI CCATGG 1 cut(s) 1328
NdeI CATATG 1 cut(s) 550
NdeII GATC 6 cut(s) 223, 451, 724, 1188, 1246, 1292
NgoMIV GCCGGC 1 cut(s) 214
NlaIV GGNNCC 3 cut(s) 179, 225, 852
NmuCI GTSAC 1 cut(s) 151
NspV TTCGAA 1 cut(s) 1337
PagI TCATGA 2 cut(s) 1171, 1249
PdiI GCCGGC 1 cut(s) 216
PdmI GAANNNNTTC 2 cut(s) 182, 1050
PfeI GAWTC 8 cut(s) 103, 111, 200, 470, 872, 1097, 1158, 1175
PfoI TCCNGGA 1 cut(s) 106
PleI GAGTC 3 cut(s) 174, 386, 553
PpsI GAGTC 3 cut(s) 174, 386, 553
Ppu21I YACGTR 1 cut(s) 565
PshAI GACNNNNGTC 1 cut(s) 165
PshBI ATTAAT 2 cut(s) 38, 1062
PsiI TTATAA 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 997
Psp6I CCWGG 3 cut(s) 106, 253, 980
PspFI CCCAGC 4 cut(s) 5, 143, 539, 1352
PspGI CCWGG 3 cut(s) 106, 253, 980
PspN4I GGNNCC 3 cut(s) 179, 225, 852
PspPI GGNCC 2 cut(s) 251, 293
PsrI GAACNNNNNNTAC 4 cut(s) 170, 202, 603, 635
PsuI RGATCY 2 cut(s) 223, 451
RsaI GTAC 3 cut(s) 1196, 1358, 1427
RsaNI GTAC 3 cut(s) 1195, 1357, 1426
SacI GAGCTC 1 cut(s) 997
SaqAI TTAA 5 cut(s) 38, 243, 348, 741, 1062
Sau3AI GATC 6 cut(s) 223, 451, 724, 1188, 1246, 1292
Sau96I GGNCC 2 cut(s) 251, 293
SchI GAGTC 3 cut(s) 175, 386, 554
ScrFI CCNGG 4 cut(s) 108, 255, 556, 982
SduI GDGCHC 2 cut(s) 997, 1231
SfaNI GCATC 2 cut(s) 248, 592
SfuI TTCGAA 1 cut(s) 1337
SinI GGWCC 1 cut(s) 251
SmlI CTYRAG 2 cut(s) 52, 488
SmoI CTYRAG 2 cut(s) 52, 488
Sse9I AATT 6 cut(s) 39, 301, 597, 668, 1142, 1163
SsiI CCGC 3 cut(s) 218, 753, 903
SspMI CTAG 2 cut(s) 915, 1290
SstI GAGCTC 1 cut(s) 997
StyD4I CCNGG 4 cut(s) 106, 253, 554, 980
StyI CCWWGG 2 cut(s) 321, 1328
TaaI ACNGT 4 cut(s) 157, 927, 1396, 1417
TaiI ACGT 1 cut(s) 567
TaqI TCGA 7 cut(s) 198, 365, 672, 875, 922, 1161, 1337
TasI AATT 6 cut(s) 39, 301, 597, 668, 1142, 1163
TatI WGTACW 1 cut(s) 1425
TfiI GAWTC 8 cut(s) 103, 111, 200, 470, 872, 1097, 1158, 1175
Tru1I TTAA 5 cut(s) 38, 243, 348, 741, 1062
Tru9I TTAA 5 cut(s) 38, 243, 348, 741, 1062
TscAI CASTG 3 cut(s) 121, 1216, 1276
TseFI GTSAC 1 cut(s) 151
Tsp45I GTSAC 1 cut(s) 151
TspDTI ATGAA 6 cut(s) 456, 1059, 1110, 1125, 1217, 1332
TspGWI ACGGA 5 cut(s) 674, 681, 1044, 1142, 1356
TspRI CASTG 3 cut(s) 121, 1216, 1276
VpaK11BI GGWCC 1 cut(s) 251
VspI ATTAAT 2 cut(s) 38, 1062
XapI RAATTY 2 cut(s) 668, 1163
XmiI GTMKAC 1 cut(s) 561
XmnI GAANNNNTTC 2 cut(s) 182, 1050
XspI CTAG 2 cut(s) 915, 1290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.