MD10G1218800.v1.1

Nuclear-pore

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0003251
Physical Location & Seq
Forward (+)
31658421 .. 31666214
7794 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1218800.v1.1.491

Sequence Viewer

Length: 2661 bp
ATGATTGAATCCCTTCACGCCTCTGTTGCAATGTACAAAAGGCTATATGAAGAGGAGCATAAACTTCATTCGTCTGGTCCTCGTATAGAAGAGGCTGCTCCAGAAGAAAGGAGAACTGACGTAAAGCTTCTCCTTGAGAGTTCTCAGGAAGCTACACAAAAGGCCCAAGACCGGGCTGCAGAACGAGTGAAATGTCTGGAGGAAGATCTGGCAAAGACCAGGAGTGAGATCATATCTTTACGGTCAGAGCGTGACAAGTTGGCTTTGGAAGCAAATTTTTCTCGAGAGAGACTTGAGAGCTTTATGAAGGAATTTGAGCATCAGAGAAATGAAACAAATGGTGTTTTAGCAAGGAACATTGAGTTCTCTCAGTTGATAGTTGACTACCAACGAAAGCTGCGTGAAAGTTCTGAATCTGTTCAAACCGCTGAGGAGCGTACTAGGAAGTTGACTATGGAGGTGTCTGTTTTGAAGCATGAAAAGGAAATGTTGGAACATGCTGAGAAGCGAGCTTGTGACGAAGTTCGTAGTTTGACGGAAAGGGTCCATAGACTGCAGGCTAGCTTGGACACTATTCAGAGTGCCGAGGAAATTCGTGAGGAGGCAAGAGCTGCTGAGAGGAGAAGACAAGAAGAGTATACGAAACAAATAGAGAGGGAGTGGGCTGATGTCAAGAAAGATCTACAAGAAGAGCGAAACAATGCCCGCACTCTCACACTTGACCGTGAGCAGTCCATACAAAACGCCATGAGACAAGTTGAAGAAATGGGAAAAGAGTTGGCTAATGCTTTGCATGCTTTTGCATCTGCTGAGACTAGAGCTGCTGTAGCTGAGGCTAAACTGACCGATCTGGACAGAAGGAGTAAATCCTCAGATGTGAAGGTTGTTGATGTCGATGGTGGGAGTGTATCTTCCTCCTTGACAAGTGATGAGGCTTTGGTGGCATTGCGTGCTGCAAAGGAAGAGATTGAAAAATTGAGAGAGGAAGTGCAAGCTAACAAGGATCACATGCTACAGTATAAGAGCATAGCTCAGGTAAACGAAGACGCATTGAGACAGATGGAATCTGCCCATGAAAACTTCAAGATTGAGGCTGAAAAACTGAAGAAATCGCTTGAAACCGAACTTCTTTCTCTAAGAGAGAGAGTATCTGAACTTGAACACGAGTGTAATTTGAAGTCTCAAGAAGTTGCTTCAGCAGCTGCAGGGAAGGAAGAAGCTCTTTCTTCCACTTTATCAGAAATTACAAGTCTAAAGGAAGAAACCTCAAATAAAACTTCCCAAATTGTGTCACTGGAGATTCAGATATCTGCTTTGAAAGAAGACTTGGAGAAAGAACATCAGCGATGGCGTTCTGCTCAGGCCAATTATGAAAGACAGGTTATCCTCCAGTCGGAGACAATACAGGAGTTGACTAAGACATCTCAGGCTTTGGCTACGCTTCAGGAAGAAGCTTCAGAGTTGCGTAAATTGGCTGATGCACTCAAAAGTGAAAATAATGAACTCAAGTCTAAGTGGGAATTTGAGAAGGGAATGTTAGAAGAATCCAAAAATGTTGCCGAGAAGAAGTACAATGAAATCAATGAACAGAACAAAATACTGCACAGTCAACTTGAGGCTTTGCACATTCAAATGACTGAAAGAGATCGTGGTTCAGTTGGAACTTCTGCAAGCACTGCTTCAGATACTTCTGGTGATGCTGGTTTACAAAATGTGATAAGTTATCTTCGACGGACAAAAGAAATTGCAGAGACAGAGATTTCCTTATTGAAACAAGAAAAACTTCGATTACAGTCACAACTTGAGAGTGCCCTCAAGGCTTCAGAAACAGCCAAGTCATCACTTCATGCTGAGCGCACGAATTCAAGATCATTGTTCACGGAGGAGGAAATGAAATCCTTGCAACTACAGGTTAGAGAAATTAACTTACTTCGTGAAAGCAATATCCAACTCAGAGAAGAAAACAAGCACAATTTTGAGGAATGCCAGAAATTGCGTGAAATATCACAAAAAGCTAATGCTGAGACTGAGAACCTAGAGAGATTGCTACAGGAGAGACAGATAGAGTTGGAAGCCTGTAAGAAAGAAATTGAAATGCAAAAGTCAGAGAAAGAACAGTCAGAACAGAGGGTTCGTGAGCTACTTGAAAGATATAGAAACATTGATGTTCAAGATTATGATCGCACAAAGGAGGATGTTCGTCAGTTGCAGAAAAAATTGGAGGAGAAGGATTCTCAAATAGTAGAAGTCAAGAAACTTCTTTCAGAAAAGTTGGAGACTGTATCACGTCTGGAGCGAGATATTGCTAACTCCAGATTGGAACTGACTGAGATGGAGAAGAGAATGAGTGACGCTTTGCAAGTTGAGGCAAGTCTAAAATCAGATATCGAGAAGCAAAGGAAGATGACTGCTCAGTATAAGAGGAGACTTGAAATGTTCTCAAGAGAAAAAGAGACCCTTTCAAAAGAAAAGGAGACACTATCAAAGGAAAAGGAGGAACTGAGCAAGGAGAATCAAGCTCTTTCTAGACAGCTGGAGGAACTCAAATTAGCGAAACGAGCATCAGGGGATACTACCGGGGAGCAGGCAATTAGGGAAGAGAAAGACCAGAAAATTCAGGTTGAACTTAATAAACATTTTTGCTTTTCTGTATCTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000075 GO:0000278 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005730 GO:0005737 GO:0005829 GO:0005911 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007049 GO:0007088 GO:0007093 GO:0007094 GO:0007275 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009536 GO:0009791 GO:0009892 GO:0009908 GO:0009909 GO:0009910 GO:0009987 GO:0010467 GO:0010468 GO:0010564 GO:0010605 GO:0010639 GO:0010948 GO:0010965 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016973 GO:0019222 GO:0022402 GO:0022414 GO:0030054 GO:0030071 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031503 GO:0031577 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0033233 GO:0033234 GO:0034613 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045786 GO:0045839 GO:0045841 GO:0045930 GO:0046907 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050793 GO:0050794 GO:0051028 GO:0051093 GO:0051128 GO:0051129 GO:0051168 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051234 GO:0051236 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051641 GO:0051649 GO:0051726 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0055044 GO:0060255 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071173 GO:0071174 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:0090567 GO:0099402 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902099 GO:1902100 GO:1903047 GO:1903320 GO:1903321 GO:1905818 GO:1905819 GO:2000026 GO:2000241 GO:2000242 GO:2000816 GO:2001251
KEGG Pathways
Metabolic & Signaling
ko03013 ko04144 ko05200 ko05216 map03013 map04144 map05200 map05216
Pfam Domains
Protein Families
TPR_MLP1_2

Protein Analysis

887

Amino Acids

102.62

Weight (kDa)

5.38

Isoelectric Point (pI)

62.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_MLP1_2 PF07926 414 - 541 2.6e-27 TPR/MLP1/MLP2-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 638
AciI CCGC 2 cut(s) 426, 706
AclWI GGATC 1 cut(s) 1011
AcsI RAATTY 6 cut(s) 274, 311, 591, 1520, 1861, 2613
AcuI CTGAAG 6 cut(s) 1124, 1179, 1427, 1440, 1665, 1806
AfaI GTAC 3 cut(s) 35, 439, 1571
AfiI CCNNNNNNNGG 3 cut(s) 171, 172, 1393
AjiI CACGTC 1 cut(s) 2288
AjnI CCWGG 1 cut(s) 218
AjuI GAANNNNNNNTTGG 2 cut(s) 1310, 1342
AlwI GGATC 1 cut(s) 1011
AlwNI CAGNNNCTG 1 cut(s) 1202
Ama87I CYCGRG 1 cut(s) 282
AoxI GGCC 2 cut(s) 162, 1362
ApeKI GCWGC 8 cut(s) 95, 176, 397, 611, 821, 953, 1199, 1202
ApoI RAATTY 6 cut(s) 274, 311, 591, 1520, 1861, 2613
Asp700I GAANNNNTTC 3 cut(s) 12, 417, 1782
AspLEI GCGC 1 cut(s) 1857
AspS9I GGNCC 3 cut(s) 77, 163, 544
AsuC2I CCSGG 2 cut(s) 173, 2578
AsuHPI GGTGA 1 cut(s) 1706
AsuNHI GCTAGC 1 cut(s) 560
AvaI CYCGRG 1 cut(s) 282
AvaII GGWCC 2 cut(s) 77, 544
BaeGI GKGCMC 1 cut(s) 1813
BauI CACGAG 1 cut(s) 1163
BbsI GAAGAC 3 cut(s) 631, 1050, 1329
BbvCI CCTCAGC 2 cut(s) 429, 831
BbvI GCAGC 8 cut(s) 82, 163, 384, 598, 808, 940, 1189, 1211
BccI CCATC 4 cut(s) 890, 1054, 1341, 2326
BciT130I CCWGG 1 cut(s) 220
BciVI GTATCC 1 cut(s) 2563
BcnI CCSGG 2 cut(s) 173, 2578
BfaI CTAG 5 cut(s) 441, 561, 816, 2036, 2526
BfmI CTRYAG 7 cut(s) 177, 554, 825, 1013, 1203, 1907, 2048
BfuI GTATCC 1 cut(s) 2563
BglI GCCNNNNNGGC 1 cut(s) 1817
BglII AGATCT 2 cut(s) 205, 679
BisI GCNGC 8 cut(s) 96, 177, 398, 612, 822, 954, 1200, 1203
BlpI GCTNAGC 1 cut(s) 1851
BlsI GCNGC 8 cut(s) 97, 178, 399, 613, 823, 955, 1201, 1204
Bme1390I CCNGG 3 cut(s) 173, 220, 2578
Bme18I GGWCC 2 cut(s) 77, 544
BmeT110I CYCGRG 1 cut(s) 282
BmgBI CACGTC 1 cut(s) 2288
BmgT120I GGNCC 3 cut(s) 77, 163, 544
BmiI GGNNCC 1 cut(s) 545
BmrFI CCNGG 3 cut(s) 173, 220, 2578
BmsI GCATC 5 cut(s) 328, 812, 1468, 1687, 2570
BmtI GCTAGC 1 cut(s) 564
BpiI GAAGAC 3 cut(s) 631, 1050, 1329
BplI GAGNNNNNCTC 2 cut(s) 1015, 1047
BpmI CTGGAG 7 cut(s) 84, 218, 1316, 1373, 2296, 2312, 2555
Bpu10I CCTNAGC 4 cut(s) 429, 831, 1032, 1359
Bpu1102I GCTNAGC 1 cut(s) 1851
BpuEI CTTGAG 8 cut(s) 155, 314, 1167, 1490, 1634, 1799, 1823, 2425
BpuMI CCSGG 2 cut(s) 173, 2578
BsaBI GATNNNNATC 1 cut(s) 2178
BsaI GGTCTC 1 cut(s) 2447
BsaJI CCNNGG 2 cut(s) 585, 2577
Bsc4I CCNNNNNNNGG 3 cut(s) 171, 172, 1393
Bse1I ACTGG 2 cut(s) 1299, 1390
Bse3DI GCAATG 2 cut(s) 36, 944
Bse8I GATNNNNATC 1 cut(s) 2178
BseBI CCWGG 1 cut(s) 220
BseDI CCNNGG 2 cut(s) 585, 2577
BseGI GGATG 1 cut(s) 2200
BseJI GATNNNNATC 1 cut(s) 2178
BseLI CCNNNNNNNGG 3 cut(s) 171, 172, 1393
BseMI GCAATG 2 cut(s) 36, 944
BseNI ACTGG 2 cut(s) 1299, 1390
BseRI GAGGAG 7 cut(s) 68, 446, 614, 634, 1898, 2237, 2437
BseSI GKGCMC 1 cut(s) 1813
BseXI GCAGC 8 cut(s) 82, 163, 384, 598, 808, 940, 1189, 1211
BsgI GTGCAG 1 cut(s) 1586
BshFI GGCC 2 cut(s) 164, 1364
BsiHKCI CYCGRG 1 cut(s) 282
BsiSI CCGG 2 cut(s) 172, 2577
BslI CCNNNNNNNGG 3 cut(s) 171, 172, 1393
BsmI GAATGC 1 cut(s) 1988
BsnI GGCC 2 cut(s) 164, 1364
Bso31I GGTCTC 1 cut(s) 2447
BsoBI CYCGRG 1 cut(s) 282
Bsp1286I GDGCHC 1 cut(s) 1813
Bsp1407I TGTACA 1 cut(s) 33
Bsp143I GATC 8 cut(s) 205, 228, 679, 847, 1003, 1645, 1868, 2179
Bsp1720I GCTNAGC 1 cut(s) 1851
BspACI CCGC 2 cut(s) 426, 706
BspANI GGCC 2 cut(s) 164, 1364
BspLI GGNNCC 1 cut(s) 545
BspMAI CTGCAG 3 cut(s) 181, 558, 1207
BspOI GCTAGC 1 cut(s) 564
BspPI GGATC 1 cut(s) 1011
BspQI GCTCTTC 1 cut(s) 684
BspTNI GGTCTC 1 cut(s) 2447
BsrDI GCAATG 2 cut(s) 36, 944
BsrGI TGTACA 1 cut(s) 33
BsrI ACTGG 2 cut(s) 1299, 1390
BssECI CCNNGG 2 cut(s) 585, 2577
BssMI GATC 8 cut(s) 205, 228, 679, 847, 1003, 1645, 1868, 2179
BssNAI GTATAC 1 cut(s) 639
BssSI CACGAG 1 cut(s) 1163
Bst1107I GTATAC 1 cut(s) 639
Bst2BI CACGAG 1 cut(s) 1163
Bst2UI CCWGG 1 cut(s) 220
Bst4CI ACNGT 7 cut(s) 243, 725, 1017, 1607, 1794, 2118, 2281
Bst6I CTCTTC 7 cut(s) 45, 84, 627, 684, 957, 2333, 2592
BstAPI GCANNNNNTGC 3 cut(s) 611, 950, 1676
BstAUI TGTACA 1 cut(s) 33
BstC8I GCNNGC 9 cut(s) 510, 558, 562, 706, 795, 951, 993, 1672, 2586
BstF5I GGATG 1 cut(s) 2200
BstHHI GCGC 1 cut(s) 1857
BstKTI GATC 8 cut(s) 208, 231, 682, 850, 1006, 1648, 1871, 2182
BstMBI GATC 8 cut(s) 205, 228, 679, 847, 1003, 1645, 1868, 2179
BstNI CCWGG 1 cut(s) 220
BstNSI RCATGY 3 cut(s) 500, 797, 1012
BstSCI CCNGG 3 cut(s) 171, 218, 2576
BstSFI CTRYAG 7 cut(s) 177, 554, 825, 1013, 1203, 1907, 2048
BstSLI GKGCMC 1 cut(s) 1813
BstV1I GCAGC 8 cut(s) 82, 163, 384, 598, 808, 940, 1189, 1211
BstV2I GAAGAC 3 cut(s) 631, 1050, 1329
BstX2I RGATCY 2 cut(s) 205, 679
BstYI RGATCY 2 cut(s) 205, 679
BstZ17I GTATAC 1 cut(s) 639
BsuI GTATCC 1 cut(s) 2563
BsuRI GGCC 2 cut(s) 164, 1364
BtgZI GCGATG 1 cut(s) 1360
BtrI CACGTC 1 cut(s) 2288
BtsCI GGATG 1 cut(s) 2200
BtsI GCAGTG 1 cut(s) 1674
BtsIMutI CAGTG 2 cut(s) 1292, 1674
Cac8I GCNNGC 9 cut(s) 510, 558, 562, 706, 795, 951, 993, 1672, 2586
CaiI CAGNNNCTG 1 cut(s) 1202
CfoI GCGC 1 cut(s) 1857
Cfr13I GGNCC 3 cut(s) 77, 163, 544
CseI GACGC 2 cut(s) 1055, 2360
Csp6I GTAC 3 cut(s) 34, 438, 1570
CviAII CATG 7 cut(s) 476, 497, 748, 794, 1009, 1073, 1847
CviQI GTAC 3 cut(s) 34, 438, 1570
DpnI GATC 8 cut(s) 207, 230, 681, 849, 1005, 1647, 1870, 2181
DpnII GATC 8 cut(s) 205, 228, 679, 847, 1003, 1645, 1868, 2179
Eam1104I CTCTTC 7 cut(s) 45, 84, 627, 684, 957, 2333, 2592
EarI CTCTTC 7 cut(s) 45, 84, 627, 684, 957, 2333, 2592
Eco31I GGTCTC 1 cut(s) 2447
Eco32I GATATC 2 cut(s) 1308, 2386
Eco47I GGWCC 2 cut(s) 77, 544
Eco57I CTGAAG 6 cut(s) 1124, 1179, 1427, 1440, 1665, 1806
Eco88I CYCGRG 1 cut(s) 282
EcoRI GAATTC 1 cut(s) 1861
EcoRII CCWGG 1 cut(s) 218
EcoRV GATATC 2 cut(s) 1308, 2386
FaeI CATG 7 cut(s) 479, 500, 751, 797, 1012, 1076, 1850
FalI AAGNNNNNCTT 8 cut(s) 1206, 1238, 1663, 1695, 1767, 1799, 2442, 2474
FatI CATG 7 cut(s) 475, 496, 747, 793, 1008, 1072, 1846
FauI CCCGC 1 cut(s) 713
FblI GTMKAC 1 cut(s) 638
Fnu4HI GCNGC 8 cut(s) 96, 177, 398, 612, 822, 954, 1200, 1203
FokI GGATG 1 cut(s) 2207
Fsp4HI GCNGC 8 cut(s) 96, 177, 398, 612, 822, 954, 1200, 1203
FspBI CTAG 5 cut(s) 441, 561, 816, 2036, 2526
GlaI GCGC 1 cut(s) 1856
GluI GCNGC 8 cut(s) 96, 177, 398, 612, 822, 954, 1200, 1203
GsuI CTGGAG 7 cut(s) 84, 218, 1316, 1373, 2296, 2312, 2555
HaeIII GGCC 2 cut(s) 164, 1364
HapII CCGG 2 cut(s) 172, 2577
HgaI GACGC 2 cut(s) 1055, 2360
HhaI GCGC 1 cut(s) 1857
Hin1II CATG 7 cut(s) 479, 500, 751, 797, 1012, 1076, 1850
Hin6I GCGC 1 cut(s) 1855
HinP1I GCGC 1 cut(s) 1855
HincII GTYRAC 4 cut(s) 382, 450, 1413, 1610
HindII GTYRAC 4 cut(s) 382, 450, 1413, 1610
HindIII AAGCTT 2 cut(s) 125, 1452
HinfI GANTC 7 cut(s) 8, 413, 1064, 1300, 1544, 2231, 2512
HpaII CCGG 2 cut(s) 172, 2577
HphI GGTGA 1 cut(s) 1706
Hpy166II GTNNAC 8 cut(s) 382, 450, 639, 1039, 1413, 1610, 1706, 1878
Hpy8I GTNNAC 8 cut(s) 382, 450, 639, 1039, 1413, 1610, 1706, 1878
Hpy99I CGWCG 1 cut(s) 1734
HpyAV CCTTC 7 cut(s) 23, 301, 852, 874, 1204, 1522, 2221
HpyCH4III ACNGT 7 cut(s) 243, 725, 1017, 1607, 1794, 2118, 2281
HpyCH4IV ACGT 2 cut(s) 120, 2287
HpySE526I ACGT 2 cut(s) 120, 2287
Hsp92II CATG 7 cut(s) 479, 500, 751, 797, 1012, 1076, 1850
HspAI GCGC 1 cut(s) 1855
Kzo9I GATC 8 cut(s) 205, 228, 679, 847, 1003, 1645, 1868, 2179
LguI GCTCTTC 1 cut(s) 684
LmnI GCTCC 5 cut(s) 55, 103, 433, 2293, 2581
Lsp1109I GCAGC 8 cut(s) 82, 163, 384, 598, 808, 940, 1189, 1211
LweI GCATC 5 cut(s) 328, 812, 1468, 1687, 2570
MaeI CTAG 5 cut(s) 441, 561, 816, 2036, 2526
MaeII ACGT 2 cut(s) 120, 2287
MaeIII GTNAC 5 cut(s) 251, 515, 1290, 1794, 2348
MalI GATC 8 cut(s) 207, 230, 681, 849, 1005, 1647, 1870, 2181
MboI GATC 8 cut(s) 205, 228, 679, 847, 1003, 1645, 1868, 2179
MflI RGATCY 2 cut(s) 205, 679
MhlI GDGCHC 1 cut(s) 1813
MmeI TCCRAC 6 cut(s) 471, 1374, 1639, 1972, 2049, 2253
MroXI GAANNNNTTC 3 cut(s) 12, 417, 1782
MseI TTAA 2 cut(s) 1923, 2628
MslI CAYNNNNRTG 1 cut(s) 1631
MspA1I CMGCKG 3 cut(s) 428, 1202, 2533
MspI CCGG 2 cut(s) 172, 2577
MspR9I CCNGG 3 cut(s) 173, 220, 2578
Mva1269I GAATGC 1 cut(s) 1988
MvaI CCWGG 1 cut(s) 220
NciI CCSGG 2 cut(s) 173, 2578
NdeII GATC 8 cut(s) 205, 228, 679, 847, 1003, 1645, 1868, 2179
NheI GCTAGC 1 cut(s) 560
NlaIII CATG 7 cut(s) 479, 500, 751, 797, 1012, 1076, 1850
NlaIV GGNNCC 1 cut(s) 545
NmeAIII GCCGAG 2 cut(s) 610, 1585
NmuCI GTSAC 5 cut(s) 251, 515, 1290, 1794, 2348
NspI RCATGY 3 cut(s) 500, 797, 1012
PaeI GCATGC 1 cut(s) 797
PaeR7I CTCGAG 1 cut(s) 282
PciSI GCTCTTC 1 cut(s) 684
PcsI WCGNNNNNNNCGW 3 cut(s) 247, 397, 2293
PctI GAATGC 1 cut(s) 1988
PdmI GAANNNNTTC 3 cut(s) 12, 417, 1782
PfeI GAWTC 7 cut(s) 8, 413, 1064, 1300, 1544, 2231, 2512
PkrI GCNGC 8 cut(s) 97, 178, 399, 613, 823, 955, 1201, 1204
Psp6I CCWGG 1 cut(s) 218
PspGI CCWGG 1 cut(s) 218
PspN4I GGNNCC 1 cut(s) 545
PspPI GGNCC 3 cut(s) 77, 163, 544
PstI CTGCAG 3 cut(s) 181, 558, 1207
PstNI CAGNNNCTG 1 cut(s) 1202
PsuI RGATCY 2 cut(s) 205, 679
PvuII CAGCTG 2 cut(s) 1202, 2533
RsaI GTAC 3 cut(s) 35, 439, 1571
RsaNI GTAC 3 cut(s) 34, 438, 1570
RseI CAYNNNNRTG 1 cut(s) 1631
SapI GCTCTTC 1 cut(s) 684
SaqAI TTAA 2 cut(s) 1923, 2628
SatI GCNGC 8 cut(s) 96, 177, 398, 612, 822, 954, 1200, 1203
Sau3AI GATC 8 cut(s) 205, 228, 679, 847, 1003, 1645, 1868, 2179
Sau96I GGNCC 3 cut(s) 77, 163, 544
ScrFI CCNGG 3 cut(s) 173, 220, 2578
SduI GDGCHC 1 cut(s) 1813
SfaNI GCATC 5 cut(s) 328, 812, 1468, 1687, 2570
SfcI CTRYAG 7 cut(s) 177, 554, 825, 1013, 1203, 1907, 2048
Sfr274I CTCGAG 1 cut(s) 282
SinI GGWCC 2 cut(s) 77, 544
SlaI CTCGAG 1 cut(s) 282
SmiMI CAYNNNNRTG 1 cut(s) 1631
SmlI CTYRAG 9 cut(s) 134, 282, 293, 1182, 1505, 1613, 1802, 1814, 2440
SmoI CTYRAG 9 cut(s) 134, 282, 293, 1182, 1505, 1613, 1802, 1814, 2440
SphI GCATGC 1 cut(s) 797
SsiI CCGC 2 cut(s) 426, 706
SspMI CTAG 5 cut(s) 441, 561, 816, 2036, 2526
StyD4I CCNGG 3 cut(s) 171, 218, 2576
TaaI ACNGT 7 cut(s) 243, 725, 1017, 1607, 1794, 2118, 2281
TaiI ACGT 2 cut(s) 123, 2290
TaqI TCGA 5 cut(s) 283, 894, 1729, 1786, 2388
TaqII GACCGA 1 cut(s) 860
TatI WGTACW 2 cut(s) 33, 1569
TfiI GAWTC 7 cut(s) 8, 413, 1064, 1300, 1544, 2231, 2512
Tru1I TTAA 2 cut(s) 1923, 2628
Tru9I TTAA 2 cut(s) 1923, 2628
TscAI CASTG 2 cut(s) 1299, 1681
TseFI GTSAC 5 cut(s) 251, 515, 1290, 1794, 2348
TseI GCWGC 8 cut(s) 95, 176, 397, 611, 821, 953, 1199, 1202
Tsp45I GTSAC 5 cut(s) 251, 515, 1290, 1794, 2348
TspGWI ACGGA 3 cut(s) 551, 1747, 1895
TspRI CASTG 2 cut(s) 1299, 1681
VpaK11BI GGWCC 2 cut(s) 77, 544
XapI RAATTY 6 cut(s) 274, 311, 591, 1520, 1861, 2613
XbaI TCTAGA 1 cut(s) 2525
XceI RCATGY 3 cut(s) 500, 797, 1012
XhoI CTCGAG 1 cut(s) 282
XmiI GTMKAC 1 cut(s) 638
XmnI GAANNNNTTC 3 cut(s) 12, 417, 1782
XspI CTAG 5 cut(s) 441, 561, 816, 2036, 2526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.