Nuclear-pore
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79280 AT1G79280 AT1G79280 |
| fragaria_vesca | FvH4_3g13850 FvH4_3g13850 |
| malus_domestica | MD05G1240600.v1.1 MD10G1218600.v1.1 MD10G1218800.v1.1 MD10G1219000.v1.1 |
| prunus_persica | Prupe.4G125000_v2.0.a1 Prupe.4G125000_v2.0.a1 Prupe.4G125000_v2.0.a1 |
| pyrus_communis | pycom05g21650 pycom05g21660 pycom05g21670 pycom05g21680 pycom09g00980 pycom10g18440 pycom10g18450 |
| rosa_chinensis | RchiOBHm_Chr5g0023031 |
| rosa_laevigata | RLG00000032692 RLG00000032694 |
| rosa_multiflora | Rmu_co8489363.1_g000001 Rmu_sc0002675.1_g000017 Rmu_sc0003955.1_g000002 Rmu_sc0015264.1_g000001 Rmu_sc0015264.1_g000002 Rmu_sc0017996.1_g000001 Rmu_sc0029290.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00056280 Rroxscaffold_7G00176540 |
| rosa_rugosa | Rorug05G0076700 |
| rosa_samantha | Rh5AG163000 Rh5BG162200 Rh5CG176900 Rh5DG163500 |
| rosa_wichuraiana | Rw5G014700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4430 |
| AarI | CACCTGC | 1 cut(s) | 5362 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 346 |
| AatII | GACGTC | 1 cut(s) | 51 |
| Acc36I | ACCTGC | 4 cut(s) | 164, 4084, 5362, 6088 |
| Acc65I | GGTACC | 1 cut(s) | 4757 |
| AccB1I | GGYRCC | 3 cut(s) | 1171, 4757, 5596 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3067 |
| AccBSI | CCGCTC | 1 cut(s) | 7 |
| AccI | GTMKAC | 1 cut(s) | 2516 |
| AccII | CGCG | 6 cut(s) | 77, 224, 1227, 2604, 3819, 5477 |
| AccIII | TCCGGA | 1 cut(s) | 84 |
| AclI | AACGTT | 1 cut(s) | 5037 |
| AclWI | GGATC | 5 cut(s) | 2794, 4347, 4368, 4466, 5584 |
| AcoI | YGGCCR | 3 cut(s) | 34, 1398, 3513 |
| AcvI | CACGTG | 1 cut(s) | 6251 |
| AcyI | GRCGYC | 3 cut(s) | 48, 129, 5169 |
| AdeI | CACNNNGTG | 3 cut(s) | 3728, 5105, 6239 |
| AflIII | ACRYGT | 2 cut(s) | 75, 4236 |
| AjiI | CACGTC | 2 cut(s) | 6245, 6278 |
| AjnI | CCWGG | 5 cut(s) | 165, 2757, 3171, 3389, 5734 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1766, 1798 |
| Alw21I | GWGCWC | 5 cut(s) | 264, 1644, 1809, 3504, 6250 |
| Alw44I | GTGCAC | 3 cut(s) | 1640, 3500, 6246 |
| AlwI | GGATC | 5 cut(s) | 2794, 4347, 4368, 4466, 5584 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1445, 4525, 5297 |
| Ama87I | CYCGRG | 3 cut(s) | 209, 443, 2991 |
| Aor13HI | TCCGGA | 1 cut(s) | 84 |
| ApaLI | GTGCAC | 3 cut(s) | 1640, 3500, 6246 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1502, 1534 |
| AseI | ATTAAT | 1 cut(s) | 309 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1890, 3544 |
| Asp718I | GGTACC | 1 cut(s) | 4757 |
| AspLEI | GCGC | 5 cut(s) | 121, 226, 252, 3231, 5819 |
| AspS9I | GGNCC | 8 cut(s) | 487, 885, 1955, 2041, 4576, 5073, 5279, 6281 |
| AsuII | TTCGAA | 1 cut(s) | 5212 |
| AsuNHI | GCTAGC | 1 cut(s) | 2030 |
| AvaI | CYCGRG | 3 cut(s) | 209, 443, 2991 |
| AvaII | GGWCC | 4 cut(s) | 885, 1955, 4576, 5279 |
| AxyI | CCTNAGG | 2 cut(s) | 4752, 5091 |
| BaeGI | GKGCMC | 5 cut(s) | 1644, 3504, 3694, 5601, 6250 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4749, 4782 |
| BanI | GGYRCC | 3 cut(s) | 1171, 4757, 5596 |
| BanII | GRGCYC | 3 cut(s) | 264, 1809, 5137 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5874, 5906 |
| BauI | CACGAG | 1 cut(s) | 5249 |
| BbrPI | CACGTG | 1 cut(s) | 6251 |
| BbsI | GAAGAC | 6 cut(s) | 344, 1031, 1079, 4613, 4739, 6232 |
| Bbv12I | GWGCWC | 5 cut(s) | 264, 1644, 1809, 3504, 6250 |
| BbvCI | CCTCAGC | 4 cut(s) | 504, 1152, 2307, 2709 |
| BceAI | ACGGC | 3 cut(s) | 2609, 2791, 4989 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1925, 1959, 5927, 5961 |
| BciT130I | CCWGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| BclI | TGATCA | 4 cut(s) | 915, 1416, 1470, 6295 |
| BfoI | RGCGCY | 2 cut(s) | 253, 5820 |
| BfuAI | ACCTGC | 4 cut(s) | 164, 4084, 5362, 6088 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3698 |
| BglII | AGATCT | 4 cut(s) | 1018, 2083, 4183, 5806 |
| BlpI | GCTNAGC | 2 cut(s) | 3732, 6153 |
| BmcAI | AGTACT | 1 cut(s) | 6028 |
| Bme1390I | CCNGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| Bme18I | GGWCC | 4 cut(s) | 885, 1955, 4576, 5279 |
| BmeT110I | CYCGRG | 3 cut(s) | 209, 443, 2991 |
| BmgBI | CACGTC | 2 cut(s) | 6245, 6278 |
| BmgT120I | GGNCC | 8 cut(s) | 487, 885, 1955, 2041, 4576, 5073, 5279, 6281 |
| BmrFI | CCNGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| BmtI | GCTAGC | 1 cut(s) | 2034 |
| BpiI | GAAGAC | 6 cut(s) | 344, 1031, 1079, 4613, 4739, 6232 |
| Bpu10I | CCTNAGC | 6 cut(s) | 504, 1152, 1730, 2307, 2709, 2910 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3732, 6153 |
| Bpu14I | TTCGAA | 1 cut(s) | 5212 |
| BpuEI | CTTGAG | 8 cut(s) | 215, 926, 1055, 1793, 2033, 2192, 3680, 3704 |
| Bsa29I | ATCGAT | 1 cut(s) | 5937 |
| BsaAI | YACGTR | 2 cut(s) | 2828, 6251 |
| BsaBI | GATNNNNATC | 3 cut(s) | 3673, 4062, 5805 |
| BsaHI | GRCGYC | 3 cut(s) | 48, 129, 5169 |
| BsaI | GGTCTC | 1 cut(s) | 3031 |
| BsaJI | CCNNGG | 6 cut(s) | 525, 1401, 3171, 5266, 5475, 6271 |
| BsaWI | WCCGGW | 1 cut(s) | 84 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 161, 191, 4915, 4945 |
| Bse118I | RCCGGY | 1 cut(s) | 4874 |
| Bse1I | ACTGG | 9 cut(s) | 433, 3495, 3562, 3900, 4797, 4898, 5281, 5649, 6060 |
| Bse21I | CCTNAGG | 2 cut(s) | 4752, 5091 |
| Bse3DI | GCAATG | 8 cut(s) | 1914, 2114, 2812, 3417, 4400, 4563, 5383, 5955 |
| Bse8I | GATNNNNATC | 3 cut(s) | 3673, 4062, 5805 |
| BseAI | TCCGGA | 1 cut(s) | 84 |
| BseBI | CCWGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| BseCI | ATCGAT | 1 cut(s) | 5937 |
| BseDI | CCNNGG | 6 cut(s) | 525, 1401, 3171, 5266, 5475, 6271 |
| BseJI | GATNNNNATC | 3 cut(s) | 3673, 4062, 5805 |
| BseMI | GCAATG | 8 cut(s) | 1914, 2114, 2812, 3417, 4400, 4563, 5383, 5955 |
| BseNI | ACTGG | 9 cut(s) | 433, 3495, 3562, 3900, 4797, 4898, 5281, 5649, 6060 |
| BseRI | GAGGAG | 7 cut(s) | 38, 1946, 2324, 2492, 2512, 3782, 5319 |
| BseSI | GKGCMC | 5 cut(s) | 1644, 3504, 3694, 5601, 6250 |
| BseYI | CCCAGC | 3 cut(s) | 1725, 2463, 4478 |
| BsgI | GTGCAG | 3 cut(s) | 293, 341, 3219 |
| Bsh1236I | CGCG | 6 cut(s) | 77, 224, 1227, 2604, 3819, 5477 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1275 |
| BshNI | GGYRCC | 3 cut(s) | 1171, 4757, 5596 |
| BshVI | ATCGAT | 1 cut(s) | 5937 |
| BsiEI | CGRYCG | 1 cut(s) | 1275 |
| BsiHKAI | GWGCWC | 5 cut(s) | 264, 1644, 1809, 3504, 6250 |
| BsiHKCI | CYCGRG | 3 cut(s) | 209, 443, 2991 |
| BsiSI | CCGG | 3 cut(s) | 33, 85, 4875 |
| BslFI | GGGAC | 3 cut(s) | 1941, 3043, 6192 |
| BsmBI | CGTCTC | 3 cut(s) | 19, 36, 923 |
| BsmFI | GGGAC | 3 cut(s) | 1941, 3043, 6192 |
| BsmI | GAATGC | 5 cut(s) | 475, 1726, 3872, 4621, 6154 |
| Bso31I | GGTCTC | 1 cut(s) | 3031 |
| BsoBI | CYCGRG | 3 cut(s) | 209, 443, 2991 |
| Bsp119I | TTCGAA | 1 cut(s) | 5212 |
| Bsp1286I | GDGCHC | 8 cut(s) | 264, 1644, 1809, 3504, 3694, 5137, 5601, 6250 |
| Bsp13I | TCCGGA | 1 cut(s) | 84 |
| Bsp1407I | TGTACA | 1 cut(s) | 1911 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3732, 6153 |
| BspDI | ATCGAT | 1 cut(s) | 5937 |
| BspEI | TCCGGA | 1 cut(s) | 84 |
| BspFNI | CGCG | 6 cut(s) | 77, 224, 1227, 2604, 3819, 5477 |
| BspHI | TCATGA | 2 cut(s) | 1288, 1612 |
| BspMAI | CTGCAG | 6 cut(s) | 802, 1018, 2059, 2436, 3079, 4891 |
| BspMI | ACCTGC | 4 cut(s) | 164, 4084, 5362, 6088 |
| BspOI | GCTAGC | 1 cut(s) | 2034 |
| BspPI | GGATC | 5 cut(s) | 2794, 4347, 4368, 4466, 5584 |
| BspQI | GCTCTTC | 3 cut(s) | 14, 1860, 5484 |
| BspT104I | TTCGAA | 1 cut(s) | 5212 |
| BspT107I | GGYRCC | 3 cut(s) | 1171, 4757, 5596 |
| BspTNI | GGTCTC | 1 cut(s) | 3031 |
| BsrBI | CCGCTC | 1 cut(s) | 7 |
| BsrDI | GCAATG | 8 cut(s) | 1914, 2114, 2812, 3417, 4400, 4563, 5383, 5955 |
| BsrFI | RCCGGY | 1 cut(s) | 4874 |
| BsrGI | TGTACA | 1 cut(s) | 1911 |
| BsrI | ACTGG | 9 cut(s) | 433, 3495, 3562, 3900, 4797, 4898, 5281, 5649, 6060 |
| BssAI | RCCGGY | 1 cut(s) | 4874 |
| BssECI | CCNNGG | 6 cut(s) | 525, 1401, 3171, 5266, 5475, 6271 |
| BssNAI | GTATAC | 1 cut(s) | 2517 |
| BssNI | GRCGYC | 3 cut(s) | 48, 129, 5169 |
| BssSI | CACGAG | 1 cut(s) | 5249 |
| BssT1I | CCWWGG | 2 cut(s) | 525, 5266 |
| Bst1107I | GTATAC | 1 cut(s) | 2517 |
| Bst2BI | CACGAG | 1 cut(s) | 5249 |
| Bst2UI | CCWGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| Bst4CI | ACNGT | 9 cut(s) | 112, 617, 704, 2721, 2895, 3595, 5208, 5646, 5968 |
| BstACI | GRCGYC | 3 cut(s) | 48, 129, 5169 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2489, 2672, 2828 |
| BstAUI | TGTACA | 1 cut(s) | 1911 |
| BstBAI | YACGTR | 2 cut(s) | 2828, 6251 |
| BstBI | TTCGAA | 1 cut(s) | 5212 |
| BstDSI | CCRYGG | 2 cut(s) | 5475, 6271 |
| BstFNI | CGCG | 6 cut(s) | 77, 224, 1227, 2604, 3819, 5477 |
| BstH2I | RGCGCY | 2 cut(s) | 253, 5820 |
| BstHHI | GCGC | 5 cut(s) | 121, 226, 252, 3231, 5819 |
| BstMCI | CGRYCG | 1 cut(s) | 1275 |
| BstNI | CCWGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| BstNSI | RCATGY | 9 cut(s) | 644, 2378, 2890, 3963, 4240, 4323, 4490, 4736, 5156 |
| BstSCI | CCNGG | 5 cut(s) | 165, 2757, 3171, 3389, 5734 |
| BstSLI | GKGCMC | 5 cut(s) | 1644, 3504, 3694, 5601, 6250 |
| BstUI | CGCG | 6 cut(s) | 77, 224, 1227, 2604, 3819, 5477 |
| BstV2I | GAAGAC | 6 cut(s) | 344, 1031, 1079, 4613, 4739, 6232 |
| BstX2I | RGATCY | 7 cut(s) | 1018, 2083, 2786, 4183, 4339, 4360, 5806 |
| BstYI | RGATCY | 7 cut(s) | 1018, 2083, 2786, 4183, 4339, 4360, 5806 |
| BstZ17I | GTATAC | 1 cut(s) | 2517 |
| Bsu15I | ATCGAT | 1 cut(s) | 5937 |
| Bsu36I | CCTNAGG | 2 cut(s) | 4752, 5091 |
| BsuTUI | ATCGAT | 1 cut(s) | 5937 |
| BtgI | CCRYGG | 2 cut(s) | 5475, 6271 |
| BtgZI | GCGATG | 1 cut(s) | 3238 |
| BtrI | CACGTC | 2 cut(s) | 6245, 6278 |
| BtsI | GCAGTG | 2 cut(s) | 3231, 4523 |
| BveI | ACCTGC | 4 cut(s) | 164, 4084, 5362, 6088 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1445, 4525, 5297 |
| CciI | TCATGA | 2 cut(s) | 1288, 1612 |
| CfoI | GCGC | 5 cut(s) | 121, 226, 252, 3231, 5819 |
| Cfr10I | RCCGGY | 1 cut(s) | 4874 |
| Cfr13I | GGNCC | 8 cut(s) | 487, 885, 1955, 2041, 4576, 5073, 5279, 6281 |
| Cfr42I | CCGCGG | 1 cut(s) | 5478 |
| ClaI | ATCGAT | 1 cut(s) | 5937 |
| CseI | GACGC | 7 cut(s) | 83, 137, 940, 1274, 3899, 5177, 6248 |
| DraI | TTTAAA | 1 cut(s) | 4260 |
| DraIII | CACNNNGTG | 3 cut(s) | 3728, 5105, 6239 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 346 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 346 |
| EaeI | YGGCCR | 3 cut(s) | 34, 1398, 3513 |
| EciI | GGCGGA | 2 cut(s) | 77, 6160 |
| Ecl136II | GAGCTC | 2 cut(s) | 262, 1807 |
| Eco130I | CCWWGG | 2 cut(s) | 525, 5266 |
| Eco24I | GRGCYC | 3 cut(s) | 264, 1809, 5137 |
| Eco31I | GGTCTC | 1 cut(s) | 3031 |
| Eco32I | GATATC | 2 cut(s) | 2755, 3642 |
| Eco47I | GGWCC | 4 cut(s) | 885, 1955, 4576, 5279 |
| Eco53kI | GAGCTC | 2 cut(s) | 262, 1807 |
| Eco72I | CACGTG | 1 cut(s) | 6251 |
| Eco81I | CCTNAGG | 2 cut(s) | 4752, 5091 |
| Eco88I | CYCGRG | 3 cut(s) | 209, 443, 2991 |
| EcoICRI | GAGCTC | 2 cut(s) | 262, 1807 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4576 |
| EcoRI | GAATTC | 2 cut(s) | 1126, 5845 |
| EcoRII | CCWGG | 5 cut(s) | 165, 2757, 3171, 3389, 5734 |
| EcoRV | GATATC | 2 cut(s) | 2755, 3642 |
| EcoT14I | CCWWGG | 2 cut(s) | 525, 5266 |
| EcoT22I | ATGCAT | 1 cut(s) | 2929 |
| EcoT38I | GRGCYC | 3 cut(s) | 264, 1809, 5137 |
| ErhI | CCWWGG | 2 cut(s) | 525, 5266 |
| Esp3I | CGTCTC | 3 cut(s) | 19, 36, 923 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 3188, 3220, 3708, 3740, 4731, 4763 |
| FaqI | GGGAC | 3 cut(s) | 1941, 3043, 6192 |
| FauI | CCCGC | 2 cut(s) | 889, 2771 |
| FbaI | TGATCA | 4 cut(s) | 915, 1416, 1470, 6295 |
| FblI | GTMKAC | 1 cut(s) | 2516 |
| FriOI | GRGCYC | 3 cut(s) | 264, 1809, 5137 |
| GlaI | GCGC | 5 cut(s) | 120, 225, 251, 3230, 5818 |
| GsaI | CCCAGC | 3 cut(s) | 1729, 2467, 4482 |
| HaeII | RGCGCY | 2 cut(s) | 253, 5820 |
| HapII | CCGG | 3 cut(s) | 33, 85, 4875 |
| HgaI | GACGC | 7 cut(s) | 83, 137, 940, 1274, 3899, 5177, 6248 |
| HhaI | GCGC | 5 cut(s) | 121, 226, 252, 3231, 5819 |
| Hin1I | GRCGYC | 3 cut(s) | 48, 129, 5169 |
| Hin6I | GCGC | 5 cut(s) | 119, 224, 250, 3229, 5817 |
| HinP1I | GCGC | 5 cut(s) | 119, 224, 250, 3229, 5817 |
| HincII | GTYRAC | 6 cut(s) | 613, 2260, 2328, 3291, 3488, 5525 |
| HindII | GTYRAC | 6 cut(s) | 613, 2260, 2328, 3291, 3488, 5525 |
| HindIII | AAGCTT | 5 cut(s) | 671, 848, 3306, 5223, 5397 |
| HpaII | CCGG | 3 cut(s) | 33, 85, 4875 |
| HpyCH4III | ACNGT | 9 cut(s) | 112, 617, 704, 2721, 2895, 3595, 5208, 5646, 5968 |
| HpyCH4IV | ACGT | 9 cut(s) | 48, 1507, 2827, 3613, 5037, 5218, 6244, 6250, 6277 |
| HpySE526I | ACGT | 9 cut(s) | 48, 1507, 2827, 3613, 5037, 5218, 6244, 6250, 6277 |
| Hsp92I | GRCGYC | 3 cut(s) | 48, 129, 5169 |
| HspAI | GCGC | 5 cut(s) | 119, 224, 250, 3229, 5817 |
| Kpn2I | TCCGGA | 1 cut(s) | 84 |
| KpnI | GGTACC | 1 cut(s) | 4761 |
| Ksp22I | TGATCA | 4 cut(s) | 915, 1416, 1470, 6295 |
| KspI | CCGCGG | 1 cut(s) | 5478 |
| LguI | GCTCTTC | 3 cut(s) | 14, 1860, 5484 |
| MaeII | ACGT | 9 cut(s) | 48, 1507, 2827, 3613, 5037, 5218, 6244, 6250, 6277 |
| MaeIII | GTNAC | 6 cut(s) | 1508, 2129, 3911, 4023, 4096, 6070 |
| MbiI | CCGCTC | 1 cut(s) | 7 |
| MfeI | CAATTG | 3 cut(s) | 3509, 5496, 6189 |
| MflI | RGATCY | 7 cut(s) | 1018, 2083, 2786, 4183, 4339, 4360, 5806 |
| MhlI | GDGCHC | 8 cut(s) | 264, 1644, 1809, 3504, 3694, 5137, 5601, 6250 |
| MluI | ACGCGT | 1 cut(s) | 75 |
| MlyI | GAGTC | 9 cut(s) | 221, 949, 1093, 1246, 1430, 1744, 2300, 4960, 5252 |
| MmeI | TCCRAC | 5 cut(s) | 42, 3856, 4419, 5736, 6227 |
| Mph1103I | ATGCAT | 1 cut(s) | 2929 |
| MroI | TCCGGA | 1 cut(s) | 84 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1890, 3544 |
| MslI | CAYNNNNRTG | 3 cut(s) | 645, 1506, 3977 |
| MspA1I | CMGCKG | 6 cut(s) | 2269, 3080, 4247, 5477, 5906, 6008 |
| MspI | CCGG | 3 cut(s) | 33, 85, 4875 |
| MspR9I | CCNGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| MunI | CAATTG | 3 cut(s) | 3509, 5496, 6189 |
| Mva1269I | GAATGC | 5 cut(s) | 475, 1726, 3872, 4621, 6154 |
| MvaI | CCWGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| MvnI | CGCG | 6 cut(s) | 77, 224, 1227, 2604, 3819, 5477 |
| NheI | GCTAGC | 1 cut(s) | 2030 |
| NmeAIII | GCCGAG | 4 cut(s) | 172, 1426, 2518, 3541 |
| NmuCI | GTSAC | 4 cut(s) | 1508, 2129, 3911, 6070 |
| NsiI | ATGCAT | 1 cut(s) | 2929 |
| NspI | RCATGY | 9 cut(s) | 644, 2378, 2890, 3963, 4240, 4323, 4490, 4736, 5156 |
| NspV | TTCGAA | 1 cut(s) | 5212 |
| PaeI | GCATGC | 3 cut(s) | 644, 4490, 4736 |
| PaeR7I | CTCGAG | 3 cut(s) | 209, 443, 2991 |
| PagI | TCATGA | 2 cut(s) | 1288, 1612 |
| PaqCI | CACCTGC | 1 cut(s) | 5362 |
| PciI | ACATGT | 1 cut(s) | 4236 |
| PciSI | GCTCTTC | 3 cut(s) | 14, 1860, 5484 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 18, 3733, 6256, 6268 |
| PctI | GAATGC | 5 cut(s) | 475, 1726, 3872, 4621, 6154 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1890, 3544 |
| PflFI | GACNNNGTC | 2 cut(s) | 47, 110 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3067 |
| PfoI | TCCNGGA | 1 cut(s) | 165 |
| PleI | GAGTC | 9 cut(s) | 220, 948, 1092, 1245, 1430, 1743, 2299, 4960, 5251 |
| PmaCI | CACGTG | 1 cut(s) | 6251 |
| PmlI | CACGTG | 1 cut(s) | 6251 |
| PpsI | GAGTC | 9 cut(s) | 220, 948, 1092, 1245, 1430, 1743, 2299, 4960, 5251 |
| Ppu21I | YACGTR | 2 cut(s) | 2828, 6251 |
| PpuMI | RGGWCCY | 1 cut(s) | 4576 |
| PscI | ACATGT | 1 cut(s) | 4236 |
| PshBI | ATTAAT | 1 cut(s) | 309 |
| PsiI | TTATAA | 1 cut(s) | 4430 |
| Psp124BI | GAGCTC | 2 cut(s) | 264, 1809 |
| Psp1406I | AACGTT | 1 cut(s) | 5037 |
| Psp5II | RGGWCCY | 1 cut(s) | 4576 |
| Psp6I | CCWGG | 5 cut(s) | 165, 2757, 3171, 3389, 5734 |
| PspCI | CACGTG | 1 cut(s) | 6251 |
| PspFI | CCCAGC | 3 cut(s) | 1725, 2463, 4478 |
| PspGI | CCWGG | 5 cut(s) | 165, 2757, 3171, 3389, 5734 |
| PspPI | GGNCC | 8 cut(s) | 487, 885, 1955, 2041, 4576, 5073, 5279, 6281 |
| PspPPI | RGGWCCY | 1 cut(s) | 4576 |
| PspXI | VCTCGAGB | 1 cut(s) | 209 |
| PstI | CTGCAG | 6 cut(s) | 802, 1018, 2059, 2436, 3079, 4891 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1445, 4525, 5297 |
| PsuI | RGATCY | 7 cut(s) | 1018, 2083, 2786, 4183, 4339, 4360, 5806 |
| PsyI | GACNNNGTC | 2 cut(s) | 47, 110 |
| PvuII | CAGCTG | 1 cut(s) | 5906 |
| RseI | CAYNNNNRTG | 3 cut(s) | 645, 1506, 3977 |
| SacI | GAGCTC | 2 cut(s) | 264, 1809 |
| SacII | CCGCGG | 1 cut(s) | 5478 |
| SapI | GCTCTTC | 3 cut(s) | 14, 1860, 5484 |
| Sau96I | GGNCC | 8 cut(s) | 487, 885, 1955, 2041, 4576, 5073, 5279, 6281 |
| ScaI | AGTACT | 1 cut(s) | 6028 |
| SchI | GAGTC | 9 cut(s) | 221, 949, 1093, 1246, 1430, 1744, 2300, 4960, 5252 |
| ScrFI | CCNGG | 5 cut(s) | 167, 2759, 3173, 3391, 5736 |
| SduI | GDGCHC | 8 cut(s) | 264, 1644, 1809, 3504, 3694, 5137, 5601, 6250 |
| Sfr274I | CTCGAG | 3 cut(s) | 209, 443, 2991 |
| Sfr303I | CCGCGG | 1 cut(s) | 5478 |
| SfuI | TTCGAA | 1 cut(s) | 5212 |
| SgrBI | CCGCGG | 1 cut(s) | 5478 |
| SinI | GGWCC | 4 cut(s) | 885, 1955, 4576, 5279 |
| SlaI | CTCGAG | 3 cut(s) | 209, 443, 2991 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 645, 1506, 3977 |
| SphI | GCATGC | 3 cut(s) | 644, 4490, 4736 |
| SspI | AATATT | 1 cut(s) | 2155 |
| SstI | GAGCTC | 2 cut(s) | 264, 1809 |
| StyD4I | CCNGG | 5 cut(s) | 165, 2757, 3171, 3389, 5734 |
| StyI | CCWWGG | 2 cut(s) | 525, 5266 |
| TaaI | ACNGT | 9 cut(s) | 112, 617, 704, 2721, 2895, 3595, 5208, 5646, 5968 |
| TaiI | ACGT | 9 cut(s) | 51, 1510, 2830, 3616, 5040, 5221, 6247, 6253, 6280 |
| TatI | WGTACW | 3 cut(s) | 1911, 3447, 6026 |
| TauI | GCSGC | 3 cut(s) | 7, 134, 3083 |
| TseFI | GTSAC | 4 cut(s) | 1508, 2129, 3911, 6070 |
| Tsp45I | GTSAC | 4 cut(s) | 1508, 2129, 3911, 6070 |
| TspGWI | ACGGA | 6 cut(s) | 113, 356, 703, 1490, 2284, 6260 |
| Tth111I | GACNNNGTC | 2 cut(s) | 47, 110 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3067 |
| VneI | GTGCAC | 3 cut(s) | 1640, 3500, 6246 |
| VpaK11BI | GGWCC | 4 cut(s) | 885, 1955, 4576, 5279 |
| VspI | ATTAAT | 1 cut(s) | 309 |
| XbaI | TCTAGA | 1 cut(s) | 1835 |
| XceI | RCATGY | 9 cut(s) | 644, 2378, 2890, 3963, 4240, 4323, 4490, 4736, 5156 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 5273 |
| XhoI | CTCGAG | 3 cut(s) | 209, 443, 2991 |
| XmiI | GTMKAC | 1 cut(s) | 2516 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1890, 3544 |
| ZraI | GACGTC | 1 cut(s) | 49 |
| ZrmI | AGTACT | 1 cut(s) | 6028 |
| Zsp2I | ATGCAT | 1 cut(s) | 2929 |