Rmu_sc0002675.1_g000017

Nuclear-pore

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002675.1
OG0003251
Physical Location & Seq
Reverse (-)
76449 .. 87711
11263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002675.1_g000017.1.cds

Sequence Viewer

Length: 4122 bp
atgtcaactccatattcctggttgcttattgaacgatatctggtattttatggtaggagtgagacaatatcattgcggtcagagcgtgacaaattcgcttcggaagcgaatattgctagagagaaacttgagagctttatgaaagaatttgagcttcagaggaacgaaacaaatggtgtattagcaaggaacattgagttctctcagttaatagttgactaccagcggaagctgcgtgaaggttctgagtccgtgcaaactgctgaggagctttctaggaagttgactatggaggtgtctcttttgaagcaagagaaggaaatgctgcaacatgctgagaagagagcttcggatgaagttcgtaatttgtcagagagggtttatagactgcaggctagtttggacactattcagagtacccagcaagttcgtgaggaggcaagagctgccgagaggagaaaacaagaagagtatacagaacaaaaagagagggagtgggctgatgctaaaagagaattgcaagaagagaaaaataatgctctcactcttgcacttgaccgcgatcagaccataaaaaatgccgtcaaacaggttgaagaaatgagaaaagatttgtctaatgcacttcatgctgctgcatctgctgagagtagagctgctgtagctgaggccagactgtctgatctggagaaaaagagttcatcctcagatatccaggttgttgagactgacggcgggagtggatctgcttctttgacaggcaatgagtataagagtatagctcaggtaaatgaggatgcattgaaacagatggaatttgcacatgaaaacttcaagattgaggctgaaaaactgaagaagtctcgagatgctgaattactctctttgagagagagggtctctgaacttgaaaatgagattatgttgaagtcccaagaagtggcttctgcagcggcagggaaggaagaagctctattctctgctttagcagaaatttcaagcctaaaggaagaaaccacagcaaaaacttctcaaactgctgccctggagattcaggtttctactttgaagcaagacttggagaaagaacatcagcgatggcgcactgctcaggctaattatgaaagacaggtcatccttcagtcagagacaatacaggagttgactaaaacatcacaagctttggctgtgcttcagcaggaagcatcagagttgcgtaaattggatgatgcactcaaaagtgaaaatgatgaactgaagtccaggtgggaagttgataaggcaatgttagaggaatctgctagtattgctgagaagaagtacaatgaaatcaatgaacagaataaaatactgcatagtcaactggaggctgtgcacattcaattggccgagagagatcgtggttcatttggaacaacttctggaagcactggagcagatacttcaggtgatgctggtttacaaactgtgataagttatcttcgacgtacaaaagagattgcagagacagagatatccttattgaaacaagaaaaactacgattgcaatcacaacttgagagtgccctcaaggcttcagaaacagcccaagcatcacttcgtgctgagcgtgcaagttcaaggtcaatgttgttctcagaggaggaactaaaatccttacaactacaggttagagaaataaacttgctccgcgaaagtaatatccaactgagagaagaaaataaacacaattttgaggaatgccagaaattgcatgaaatatcacaaaaggccagtgttgagcgtcacaacctagagaggctgttaagggatagacagattgaggtggaggcatgtaaaaaagacattgaaatgcaaaagatggagaaagatcacttggaaaagaggcttagtgagttacttgaaaggtatagaaatatagatgttgaagattatgatcgcacaaaggctgaacatcagcagatgcagaagctggagattgttttgtctttagaaaaagatcttgcaaacttcagatcggaactgactgagagggataggaggataaatgacatgttgccagcggaggcaattttaaaatcagatgtggagaagcaaagaagaattggccttcagtttaagaggaagtatgagacatgcttaaaggaaaaggaggatcttcaaagacaaaaggaggatcttcaaaggcaaaaggacgaccttcaaaggcaatgcgacgaccttcaaaggcaaagggatgaccttataaggcagttggaggaaaaacaagcgaaacgatcttctggtgatcctgctggggagcatgcccttaaagaagagaaagaccaaaaaattcagacactgcaaaaaatgatggagaggcagaaagaggcaatggagaggcagaaagaggacctacgaaatgagaaagcaaaccgcaagaagactgagaatgctttattggaatctcttaataaaattgagcaggacaaaataatcttcaagaatgagctggagaagcataagctggctgtcaggcagctttcagatgagcaggaaaagctgaagcatgcaaaagatggtcttcctgagggtacctcagttgttcaacatctttctggagccatactggatgatcgagcctctgcttacttcttggtttgtgaaaattatgaaagggtagcacattcaactttgaatgagcttggagctggtggtgttcctgcagacactccagttgcagatgcttcattagctgctacttctgctcctgctccagcagccacccttgcatcctcaatgactcctacggcagttatgccatccaaagcaacagatgaaactgaaaggaggttcacttttcccaaaagaaacgttgaacctcgtaaaacagggaggaaattggttcggccccgtcttgtaagacctgaggaaccacaaggtgatgtagagatgtcagagacggaaggggctcagactttgaataaacatgcagcttccactgacgccgaagttcagggtgttgctacttcgacacaaccactgtttcgaaaacgtcaagcttcttcatctcagtttgagtctcacgaggaatcaatgaaccaaggggaagctggtcctgatgtggcagcacctgtgtcaaagaagcccaaaggttcagaatctcctcaaaagagtgaagggcaagcacctgcttcattggaaaatcttggcaatgttccagccacagaagaagcttctaatgctgataatcctgaaggttcaaatgaggaaggtgctgttgatgctgagaaggaagagattgagaataccgcggtgaaggttgaagagccaattgaacaacaatttgatggttcaagtcaacctgaatcacaacatgacaagaatagtgttttggaagaagatgtggatggatcagatgttaaagagatggtgcccgatgagggagcaaaggataatctggtggagcctgacaaccgacagtccagtggagttgggggagacagagaagagggagagcttccacctgatgtatcagaccttgaaggtggtgatacaacgatgggcagtcctggtatagaggaaggtcagtcggagcctattacaacacccagagcttcaccatctagggttgatgatgaagatcttgctggcgcttctgttgtggatgttagtgaggtgaattctccagaagttcttaatgaagagaaaaataatgaagttgatgtacctgaagagacagctgaagcctctgataagtcaaatgatggtatcgatcaaactgcaatggagactgacctcactgttgaagctgcctctgtagctggtgatgcctctataaccgctgagagtacctctgcaagtactactacagaggctagtggttcaagacaggccagtgctagtgtcaccactgaagcagaagaggcaaagcaggtttctcctgcctctaccaccataaatataactgaacaagctaggcggaatgctgagctaagacagcgtggacagcagggacgacaaccaattgttgtacctccgaccccaactagaggtcgtggaagaccagcacagcgtggacgtgcacgtgctgtgcgtcgtcctgtccgtggacgtggccccacatctggtgatcaagtataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000075 GO:0000278 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005730 GO:0005737 GO:0005829 GO:0005911 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007049 GO:0007088 GO:0007093 GO:0007094 GO:0007275 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009536 GO:0009791 GO:0009892 GO:0009908 GO:0009909 GO:0009910 GO:0009987 GO:0010467 GO:0010468 GO:0010564 GO:0010605 GO:0010639 GO:0010948 GO:0010965 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016973 GO:0019222 GO:0022402 GO:0022414 GO:0030054 GO:0030071 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031503 GO:0031577 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0033233 GO:0033234 GO:0034613 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045786 GO:0045839 GO:0045841 GO:0045930 GO:0046907 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050793 GO:0050794 GO:0051028 GO:0051093 GO:0051128 GO:0051129 GO:0051168 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051234 GO:0051236 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051641 GO:0051649 GO:0051726 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0055044 GO:0060255 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071173 GO:0071174 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:0090567 GO:0099402 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902099 GO:1902100 GO:1903047 GO:1903320 GO:1903321 GO:1905818 GO:1905819 GO:2000026 GO:2000241 GO:2000242 GO:2000816 GO:2001251
KEGG Pathways
Metabolic & Signaling
ko03013 ko04144 ko05200 ko05216 map03013 map04144 map05200 map05216
Pfam Domains
Protein Families
TPR_MLP1_2

Protein Analysis

1373

Amino Acids

153.74

Weight (kDa)

4.99

Isoelectric Point (pI)

57.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2246
AarI CACCTGC 1 cut(s) 3178
Acc36I ACCTGC 2 cut(s) 3178, 3904
Acc65I GGTACC 1 cut(s) 2573
AccB1I GGYRCC 2 cut(s) 2573, 3412
AccB7I CCANNNNNTGG 1 cut(s) 940
AccI GTMKAC 1 cut(s) 473
AccII CGCG 3 cut(s) 561, 1692, 3293
AclI AACGTT 1 cut(s) 2853
AclWI GGATC 5 cut(s) 751, 2163, 2184, 2282, 3400
AcoI YGGCCR 1 cut(s) 1386
AcsI RAATTY 6 cut(s) 92, 146, 815, 993, 2331, 3661
AcvI CACGTG 1 cut(s) 4067
AcyI GRCGYC 1 cut(s) 2985
AdeI CACNNNGTG 3 cut(s) 1601, 2921, 4055
AfaI GTAC 8 cut(s) 418, 1322, 1489, 2575, 3708, 3832, 3844, 4014
AfiI CCNNNNNNNGG 5 cut(s) 940, 3422, 4031, 4088, 4106
AflIII ACRYGT 1 cut(s) 2052
AjiI CACGTC 2 cut(s) 4061, 4094
AjnI CCWGG 5 cut(s) 17, 714, 1044, 1262, 3550
Alw21I GWGCWC 2 cut(s) 1377, 4066
Alw44I GTGCAC 2 cut(s) 1373, 4062
AlwI GGATC 5 cut(s) 751, 2163, 2184, 2282, 3400
AlwNI CAGNNNCTG 3 cut(s) 1972, 2341, 3113
Ama87I CYCGRG 1 cut(s) 864
AoxI GGCC 7 cut(s) 669, 1386, 1770, 2107, 2888, 3873, 4096
ApaLI GTGCAC 2 cut(s) 1373, 4062
ApoI RAATTY 6 cut(s) 92, 146, 815, 993, 2331, 3661
Asp700I GAANNNNTTC 1 cut(s) 1417
Asp718I GGTACC 1 cut(s) 2573
AspLEI GCGC 2 cut(s) 1104, 3635
AspS9I GGNCC 4 cut(s) 2392, 2889, 3095, 4097
AsuII TTCGAA 1 cut(s) 3028
AvaI CYCGRG 1 cut(s) 864
AvaII GGWCC 2 cut(s) 2392, 3095
AxyI CCTNAGG 2 cut(s) 2568, 2907
BaeGI GKGCMC 4 cut(s) 1377, 1567, 3417, 4066
BaeI ACNNNNGTAYC 2 cut(s) 2565, 2598
BanI GGYRCC 2 cut(s) 2573, 3412
BanII GRGCYC 1 cut(s) 2953
BarI GAAGNNNNNNTAC 2 cut(s) 3690, 3722
BauI CACGAG 1 cut(s) 3065
BbrPI CACGTG 1 cut(s) 4067
BbsI GAAGAC 3 cut(s) 2429, 2555, 4048
Bbv12I GWGCWC 2 cut(s) 1377, 4066
BbvCI CCTCAGC 2 cut(s) 264, 666
BceAI ACGGC 3 cut(s) 566, 748, 2805
BcgI CGANNNNNNTGC 2 cut(s) 3743, 3777
BciT130I CCWGG 5 cut(s) 19, 716, 1046, 1264, 3552
BclI TGATCA 1 cut(s) 4111
BfmI CTRYAG 7 cut(s) 389, 660, 948, 1664, 2703, 3798, 3849
BfoI RGCGCY 1 cut(s) 3636
BfuAI ACCTGC 2 cut(s) 3178, 3904
BglI GCCNNNNNGGC 1 cut(s) 1571
BglII AGATCT 2 cut(s) 1999, 3622
BlpI GCTNAGC 2 cut(s) 1605, 3969
BmcAI AGTACT 1 cut(s) 3844
Bme1390I CCNGG 5 cut(s) 19, 716, 1046, 1264, 3552
Bme18I GGWCC 2 cut(s) 2392, 3095
BmeT110I CYCGRG 1 cut(s) 864
BmgBI CACGTC 2 cut(s) 4061, 4094
BmgT120I GGNCC 4 cut(s) 2392, 2889, 3095, 4097
BmiI GGNNCC 8 cut(s) 2575, 2602, 2891, 2913, 3414, 3447, 3576, 4099
BmrFI CCNGG 5 cut(s) 19, 716, 1046, 1264, 3552
BpiI GAAGAC 3 cut(s) 2429, 2555, 4048
BplI GAGNNNNNCTC 8 cut(s) 766, 798, 884, 916, 2561, 2593, 3818, 3850
Bpu10I CCTNAGC 4 cut(s) 264, 666, 783, 1110
Bpu1102I GCTNAGC 2 cut(s) 1605, 3969
Bpu14I TTCGAA 1 cut(s) 3028
BpuEI CTTGAG 3 cut(s) 149, 1553, 1577
Bsa29I ATCGAT 1 cut(s) 3753
BsaAI YACGTR 1 cut(s) 4067
BsaBI GATNNNNATC 3 cut(s) 1546, 1935, 3621
BsaHI GRCGYC 1 cut(s) 2985
BsaI GGTCTC 1 cut(s) 904
BsaJI CCNNGG 4 cut(s) 1044, 3082, 3291, 4087
BsaXI ACNNNNNCTCC 2 cut(s) 2731, 2761
Bsc4I CCNNNNNNNGG 5 cut(s) 940, 3422, 4031, 4088, 4106
Bse1I ACTGG 7 cut(s) 1368, 1435, 1773, 2613, 2714, 3465, 3876
Bse21I CCTNAGG 2 cut(s) 2568, 2907
Bse3DI GCAATG 7 cut(s) 71, 769, 1290, 2216, 2379, 3199, 3771
Bse8I GATNNNNATC 3 cut(s) 1546, 1935, 3621
BseBI CCWGG 5 cut(s) 19, 716, 1046, 1264, 3552
BseCI ATCGAT 1 cut(s) 3753
BseDI CCNNGG 4 cut(s) 1044, 3082, 3291, 4087
BseJI GATNNNNATC 3 cut(s) 1546, 1935, 3621
BseLI CCNNNNNNNGG 5 cut(s) 940, 3422, 4031, 4088, 4106
BseMI GCAATG 7 cut(s) 71, 769, 1290, 2216, 2379, 3199, 3771
BseNI ACTGG 7 cut(s) 1368, 1435, 1773, 2613, 2714, 3465, 3876
BseRI GAGGAG 5 cut(s) 281, 449, 469, 1655, 3135
BseSI GKGCMC 4 cut(s) 1377, 1567, 3417, 4066
BseYI CCCAGC 2 cut(s) 420, 2294
Bsh1236I CGCG 3 cut(s) 561, 1692, 3293
BshFI GGCC 7 cut(s) 671, 1388, 1772, 2109, 2890, 3875, 4098
BshNI GGYRCC 2 cut(s) 2573, 3412
BshVI ATCGAT 1 cut(s) 3753
BsiHKAI GWGCWC 2 cut(s) 1377, 4066
BsiHKCI CYCGRG 1 cut(s) 864
BslFI GGGAC 2 cut(s) 916, 4008
BslI CCNNNNNNNGG 5 cut(s) 940, 3422, 4031, 4088, 4106
BsmBI CGTCTC 1 cut(s) 2933
BsmFI GGGAC 2 cut(s) 916, 4008
BsmI GAATGC 3 cut(s) 1745, 2437, 3970
BsnI GGCC 7 cut(s) 671, 1388, 1772, 2109, 2890, 3875, 4098
Bso31I GGTCTC 1 cut(s) 904
BsoBI CYCGRG 1 cut(s) 864
Bsp119I TTCGAA 1 cut(s) 3028
Bsp1286I GDGCHC 5 cut(s) 1377, 1567, 2953, 3417, 4066
Bsp1720I GCTNAGC 2 cut(s) 1605, 3969
BspANI GGCC 7 cut(s) 671, 1388, 1772, 2109, 2890, 3875, 4098
BspDI ATCGAT 1 cut(s) 3753
BspFNI CGCG 3 cut(s) 561, 1692, 3293
BspLI GGNNCC 8 cut(s) 2575, 2602, 2891, 2913, 3414, 3447, 3576, 4099
BspMAI CTGCAG 3 cut(s) 393, 952, 2707
BspMI ACCTGC 2 cut(s) 3178, 3904
BspPI GGATC 5 cut(s) 751, 2163, 2184, 2282, 3400
BspQI GCTCTTC 1 cut(s) 3300
BspT104I TTCGAA 1 cut(s) 3028
BspT107I GGYRCC 2 cut(s) 2573, 3412
BspTNI GGTCTC 1 cut(s) 904
BsrDI GCAATG 7 cut(s) 71, 769, 1290, 2216, 2379, 3199, 3771
BsrI ACTGG 7 cut(s) 1368, 1435, 1773, 2613, 2714, 3465, 3876
BssECI CCNNGG 4 cut(s) 1044, 3082, 3291, 4087
BssNAI GTATAC 1 cut(s) 474
BssNI GRCGYC 1 cut(s) 2985
BssSI CACGAG 1 cut(s) 3065
BssT1I CCWWGG 1 cut(s) 3082
Bst1107I GTATAC 1 cut(s) 474
Bst2BI CACGAG 1 cut(s) 3065
Bst2UI CCWGG 5 cut(s) 19, 716, 1046, 1264, 3552
Bst4CI ACNGT 5 cut(s) 678, 1468, 3024, 3462, 3784
BstACI GRCGYC 1 cut(s) 2985
BstAPI GCANNNNNTGC 2 cut(s) 446, 629
BstBAI YACGTR 1 cut(s) 4067
BstBI TTCGAA 1 cut(s) 3028
BstC8I GCNNGC 8 cut(s) 393, 1611, 2061, 2304, 2508, 2550, 3165, 3631
BstDSI CCRYGG 2 cut(s) 3291, 4087
BstFNI CGCG 3 cut(s) 561, 1692, 3293
BstH2I RGCGCY 1 cut(s) 3636
BstHHI GCGC 2 cut(s) 1104, 3635
BstNI CCWGG 5 cut(s) 19, 716, 1046, 1264, 3552
BstNSI RCATGY 7 cut(s) 335, 1836, 2056, 2139, 2306, 2552, 2972
BstSCI CCNGG 5 cut(s) 17, 714, 1044, 1262, 3550
BstSFI CTRYAG 7 cut(s) 389, 660, 948, 1664, 2703, 3798, 3849
BstSLI GKGCMC 4 cut(s) 1377, 1567, 3417, 4066
BstUI CGCG 3 cut(s) 561, 1692, 3293
BstV2I GAAGAC 3 cut(s) 2429, 2555, 4048
BstX2I RGATCY 5 cut(s) 743, 1999, 2155, 2176, 3622
BstXI CCANNNNNNTGG 1 cut(s) 18
BstYI RGATCY 5 cut(s) 743, 1999, 2155, 2176, 3622
BstZ17I GTATAC 1 cut(s) 474
Bsu15I ATCGAT 1 cut(s) 3753
Bsu36I CCTNAGG 2 cut(s) 2568, 2907
BsuRI GGCC 7 cut(s) 671, 1388, 1772, 2109, 2890, 3875, 4098
BsuTUI ATCGAT 1 cut(s) 3753
BtgI CCRYGG 2 cut(s) 3291, 4087
BtgZI GCGATG 1 cut(s) 1111
BtrI CACGTC 2 cut(s) 4061, 4094
BtsI GCAGTG 2 cut(s) 1104, 2339
BveI ACCTGC 2 cut(s) 3178, 3904
Cac8I GCNNGC 8 cut(s) 393, 1611, 2061, 2304, 2508, 2550, 3165, 3631
CaiI CAGNNNCTG 3 cut(s) 1972, 2341, 3113
CfoI GCGC 2 cut(s) 1104, 3635
Cfr13I GGNCC 4 cut(s) 2392, 2889, 3095, 4097
Cfr42I CCGCGG 1 cut(s) 3294
ClaI ATCGAT 1 cut(s) 3753
CseI GACGC 3 cut(s) 1772, 2993, 4064
Csp6I GTAC 8 cut(s) 417, 1321, 1488, 2574, 3707, 3831, 3843, 4013
CviQI GTAC 8 cut(s) 417, 1321, 1488, 2574, 3707, 3831, 3843, 4013
DraI TTTAAA 1 cut(s) 2076
DraIII CACNNNGTG 3 cut(s) 1601, 2921, 4055
EaeI YGGCCR 1 cut(s) 1386
EciI GGCGGA 1 cut(s) 3976
Eco130I CCWWGG 1 cut(s) 3082
Eco24I GRGCYC 1 cut(s) 2953
Eco31I GGTCTC 1 cut(s) 904
Eco32I GATATC 3 cut(s) 38, 712, 1515
Eco47I GGWCC 2 cut(s) 2392, 3095
Eco72I CACGTG 1 cut(s) 4067
Eco81I CCTNAGG 2 cut(s) 2568, 2907
Eco88I CYCGRG 1 cut(s) 864
EcoO109I RGGNCCY 1 cut(s) 2392
EcoRI GAATTC 1 cut(s) 3661
EcoRII CCWGG 5 cut(s) 17, 714, 1044, 1262, 3550
EcoRV GATATC 3 cut(s) 38, 712, 1515
EcoT14I CCWWGG 1 cut(s) 3082
EcoT22I ATGCAT 1 cut(s) 802
EcoT38I GRGCYC 1 cut(s) 2953
ErhI CCWWGG 1 cut(s) 3082
Esp3I CGTCTC 1 cut(s) 2933
FalI AAGNNNNNCTT 6 cut(s) 1061, 1093, 1581, 1613, 2547, 2579
FaqI GGGAC 2 cut(s) 916, 4008
FauI CCCGC 1 cut(s) 728
FbaI TGATCA 1 cut(s) 4111
FblI GTMKAC 1 cut(s) 473
FriOI GRGCYC 1 cut(s) 2953
GlaI GCGC 2 cut(s) 1103, 3634
GsaI CCCAGC 2 cut(s) 424, 2298
HaeII RGCGCY 1 cut(s) 3636
HaeIII GGCC 7 cut(s) 671, 1388, 1772, 2109, 2890, 3875, 4098
HgaI GACGC 3 cut(s) 1772, 2993, 4064
HhaI GCGC 2 cut(s) 1104, 3635
Hin1I GRCGYC 1 cut(s) 2985
Hin6I GCGC 2 cut(s) 1102, 3633
HinP1I GCGC 2 cut(s) 1102, 3633
HincII GTYRAC 6 cut(s) 6, 217, 285, 1164, 1361, 3341
HindII GTYRAC 6 cut(s) 6, 217, 285, 1164, 1361, 3341
HindIII AAGCTT 3 cut(s) 1179, 3039, 3213
HinfI GANTC 9 cut(s) 248, 1051, 1295, 2444, 2782, 3059, 3071, 3140, 3347
Hpy99I CGWCG 3 cut(s) 1488, 2219, 4080
HpyCH4III ACNGT 5 cut(s) 678, 1468, 3024, 3462, 3784
HpyCH4IV ACGT 6 cut(s) 1486, 2853, 3034, 4060, 4066, 4093
HpySE526I ACGT 6 cut(s) 1486, 2853, 3034, 4060, 4066, 4093
Hsp92I GRCGYC 1 cut(s) 2985
HspAI GCGC 2 cut(s) 1102, 3633
KpnI GGTACC 1 cut(s) 2577
Ksp22I TGATCA 1 cut(s) 4111
KspI CCGCGG 1 cut(s) 3294
LguI GCTCTTC 1 cut(s) 3300
MaeII ACGT 6 cut(s) 1486, 2853, 3034, 4060, 4066, 4093
MaeIII GTNAC 4 cut(s) 86, 1784, 1896, 3886
MfeI CAATTG 3 cut(s) 1382, 3312, 4005
MflI RGATCY 5 cut(s) 743, 1999, 2155, 2176, 3622
MhlI GDGCHC 5 cut(s) 1377, 1567, 2953, 3417, 4066
MlyI GAGTC 3 cut(s) 257, 2776, 3068
MmeI TCCRAC 4 cut(s) 1729, 2235, 3552, 4043
Mph1103I ATGCAT 1 cut(s) 802
MroXI GAANNNNTTC 1 cut(s) 1417
MseI TTAA 9 cut(s) 209, 1805, 2075, 2118, 2141, 2310, 2451, 3402, 3678
MslI CAYNNNNRTG 1 cut(s) 1850
MspA1I CMGCKG 6 cut(s) 226, 953, 2063, 3293, 3722, 3824
MspR9I CCNGG 5 cut(s) 19, 716, 1046, 1264, 3552
MunI CAATTG 3 cut(s) 1382, 3312, 4005
Mva1269I GAATGC 3 cut(s) 1745, 2437, 3970
MvaI CCWGG 5 cut(s) 19, 716, 1046, 1264, 3552
MvnI CGCG 3 cut(s) 561, 1692, 3293
NlaIV GGNNCC 8 cut(s) 2575, 2602, 2891, 2913, 3414, 3447, 3576, 4099
NmeAIII GCCGAG 2 cut(s) 475, 1414
NmuCI GTSAC 3 cut(s) 86, 1784, 3886
NsiI ATGCAT 1 cut(s) 802
NspI RCATGY 7 cut(s) 335, 1836, 2056, 2139, 2306, 2552, 2972
NspV TTCGAA 1 cut(s) 3028
PaeI GCATGC 2 cut(s) 2306, 2552
PaeR7I CTCGAG 1 cut(s) 864
PaqCI CACCTGC 1 cut(s) 3178
PciI ACATGT 1 cut(s) 2052
PciSI GCTCTTC 1 cut(s) 3300
PcsI WCGNNNNNNNCGW 3 cut(s) 1606, 4072, 4084
PctI GAATGC 3 cut(s) 1745, 2437, 3970
PdmI GAANNNNTTC 1 cut(s) 1417
PfeI GAWTC 6 cut(s) 1051, 1295, 2444, 3071, 3140, 3347
PflMI CCANNNNNTGG 1 cut(s) 940
PleI GAGTC 3 cut(s) 256, 2776, 3067
PmaCI CACGTG 1 cut(s) 4067
PmlI CACGTG 1 cut(s) 4067
PpsI GAGTC 3 cut(s) 256, 2776, 3067
Ppu21I YACGTR 1 cut(s) 4067
PpuMI RGGWCCY 1 cut(s) 2392
PscI ACATGT 1 cut(s) 2052
PsiI TTATAA 1 cut(s) 2246
Psp1406I AACGTT 1 cut(s) 2853
Psp5II RGGWCCY 1 cut(s) 2392
Psp6I CCWGG 5 cut(s) 17, 714, 1044, 1262, 3550
PspCI CACGTG 1 cut(s) 4067
PspFI CCCAGC 2 cut(s) 420, 2294
PspGI CCWGG 5 cut(s) 17, 714, 1044, 1262, 3550
PspN4I GGNNCC 8 cut(s) 2575, 2602, 2891, 2913, 3414, 3447, 3576, 4099
PspPI GGNCC 4 cut(s) 2392, 2889, 3095, 4097
PspPPI RGGWCCY 1 cut(s) 2392
PstI CTGCAG 3 cut(s) 393, 952, 2707
PstNI CAGNNNCTG 3 cut(s) 1972, 2341, 3113
PsuI RGATCY 5 cut(s) 743, 1999, 2155, 2176, 3622
PvuII CAGCTG 1 cut(s) 3722
RsaI GTAC 8 cut(s) 418, 1322, 1489, 2575, 3708, 3832, 3844, 4014
RsaNI GTAC 8 cut(s) 417, 1321, 1488, 2574, 3707, 3831, 3843, 4013
RseI CAYNNNNRTG 1 cut(s) 1850
SacII CCGCGG 1 cut(s) 3294
SapI GCTCTTC 1 cut(s) 3300
SaqAI TTAA 9 cut(s) 209, 1805, 2075, 2118, 2141, 2310, 2451, 3402, 3678
Sau96I GGNCC 4 cut(s) 2392, 2889, 3095, 4097
ScaI AGTACT 1 cut(s) 3844
SchI GAGTC 3 cut(s) 257, 2776, 3068
ScrFI CCNGG 5 cut(s) 19, 716, 1046, 1264, 3552
SduI GDGCHC 5 cut(s) 1377, 1567, 2953, 3417, 4066
SfcI CTRYAG 7 cut(s) 389, 660, 948, 1664, 2703, 3798, 3849
Sfr274I CTCGAG 1 cut(s) 864
Sfr303I CCGCGG 1 cut(s) 3294
SfuI TTCGAA 1 cut(s) 3028
SgrBI CCGCGG 1 cut(s) 3294
SinI GGWCC 2 cut(s) 2392, 3095
SlaI CTCGAG 1 cut(s) 864
SmiMI CAYNNNNRTG 1 cut(s) 1850
SmlI CTYRAG 4 cut(s) 128, 864, 1556, 1568
SmoI CTYRAG 4 cut(s) 128, 864, 1556, 1568
SphI GCATGC 2 cut(s) 2306, 2552
SspI AATATT 1 cut(s) 112
StyD4I CCNGG 5 cut(s) 17, 714, 1044, 1262, 3550
StyI CCWWGG 1 cut(s) 3082
TaaI ACNGT 5 cut(s) 678, 1468, 3024, 3462, 3784
TaiI ACGT 6 cut(s) 1489, 2856, 3037, 4063, 4069, 4096
TaqI TCGA 6 cut(s) 865, 1483, 2617, 3011, 3028, 3753
TatI WGTACW 2 cut(s) 1320, 3842
TauI GCSGC 1 cut(s) 956
TfiI GAWTC 6 cut(s) 1051, 1295, 2444, 3071, 3140, 3347
Tru1I TTAA 9 cut(s) 209, 1805, 2075, 2118, 2141, 2310, 2451, 3402, 3678
Tru9I TTAA 9 cut(s) 209, 1805, 2075, 2118, 2141, 2310, 2451, 3402, 3678
TseFI GTSAC 3 cut(s) 86, 1784, 3886
Tsp45I GTSAC 3 cut(s) 86, 1784, 3886
TspGWI ACGGA 3 cut(s) 241, 2957, 4076
Van91I CCANNNNNTGG 1 cut(s) 940
VneI GTGCAC 2 cut(s) 1373, 4062
VpaK11BI GGWCC 2 cut(s) 2392, 3095
XapI RAATTY 6 cut(s) 92, 146, 815, 993, 2331, 3661
XceI RCATGY 7 cut(s) 335, 1836, 2056, 2139, 2306, 2552, 2972
XcmI CCANNNNNNNNNTGG 1 cut(s) 3089
XhoI CTCGAG 1 cut(s) 864
XmiI GTMKAC 1 cut(s) 473
XmnI GAANNNNTTC 1 cut(s) 1417
ZrmI AGTACT 1 cut(s) 3844
Zsp2I ATGCAT 1 cut(s) 802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.