Nuclear-pore
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79280 AT1G79280 AT1G79280 |
| fragaria_vesca | FvH4_3g13850 FvH4_3g13850 |
| malus_domestica | MD05G1240600.v1.1 MD10G1218600.v1.1 MD10G1218800.v1.1 MD10G1219000.v1.1 |
| prunus_persica | Prupe.4G125000_v2.0.a1 Prupe.4G125000_v2.0.a1 Prupe.4G125000_v2.0.a1 |
| pyrus_communis | pycom05g21650 pycom05g21660 pycom05g21670 pycom05g21680 pycom09g00980 pycom10g18440 pycom10g18450 |
| rosa_chinensis | RchiOBHm_Chr5g0023031 |
| rosa_laevigata | RLG00000032692 RLG00000032694 |
| rosa_multiflora | Rmu_co8489363.1_g000001 Rmu_sc0002675.1_g000017 Rmu_sc0003955.1_g000002 Rmu_sc0015264.1_g000001 Rmu_sc0015264.1_g000002 Rmu_sc0017996.1_g000001 Rmu_sc0029290.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00056280 Rroxscaffold_7G00176540 |
| rosa_rugosa | Rorug05G0076700 |
| rosa_samantha | Rh5AG163000 Rh5BG162200 Rh5CG176900 Rh5DG163500 |
| rosa_wichuraiana | Rw5G014700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 764 |
| Acc36I | ACCTGC | 1 cut(s) | 164 |
| AccBSI | CCGCTC | 2 cut(s) | 7, 476 |
| AccII | CGCG | 1 cut(s) | 224 |
| AcoI | YGGCCR | 1 cut(s) | 144 |
| AcsI | RAATTY | 2 cut(s) | 197, 1126 |
| AcuI | CTGAAG | 1 cut(s) | 215 |
| AcyI | GRCGYC | 4 cut(s) | 48, 75, 129, 761 |
| AfaI | GTAC | 7 cut(s) | 95, 179, 456, 523, 538, 1111, 1262 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 84, 97, 259, 480, 1119 |
| AgsI | TTSAA | 7 cut(s) | 697, 857, 908, 940, 974, 1037, 1136 |
| Alw21I | GWGCWC | 2 cut(s) | 273, 780 |
| Alw26I | GTCTC | 7 cut(s) | 19, 101, 623, 682, 894, 923, 977 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 986 |
| Ama87I | CYCGRG | 1 cut(s) | 209 |
| AoxI | GGCC | 5 cut(s) | 69, 117, 144, 486, 1269 |
| ApaI | GGGCCC | 1 cut(s) | 121 |
| ApoI | RAATTY | 2 cut(s) | 197, 1126 |
| AspLEI | GCGC | 1 cut(s) | 226 |
| AspS9I | GGNCC | 5 cut(s) | 88, 117, 118, 487, 885 |
| AsuNHI | GCTAGC | 1 cut(s) | 1061 |
| AvaI | CYCGRG | 1 cut(s) | 209 |
| AvaII | GGWCC | 2 cut(s) | 88, 885 |
| BaeGI | GKGCMC | 1 cut(s) | 121 |
| BanII | GRGCYC | 3 cut(s) | 121, 273, 780 |
| BbsI | GAAGAC | 1 cut(s) | 657 |
| Bbv12I | GWGCWC | 2 cut(s) | 273, 780 |
| BccI | CCATC | 6 cut(s) | 146, 194, 303, 311, 437, 1223 |
| BceAI | ACGGC | 4 cut(s) | 35, 55, 159, 1256 |
| BcoDI | GTCTC | 7 cut(s) | 19, 101, 623, 682, 894, 923, 977 |
| BfaI | CTAG | 2 cut(s) | 708, 1062 |
| BfmI | CTRYAG | 2 cut(s) | 801, 1014 |
| BfuAI | ACCTGC | 1 cut(s) | 164 |
| BglII | AGATCT | 1 cut(s) | 1018 |
| Bme18I | GGWCC | 2 cut(s) | 88, 885 |
| BmeT110I | CYCGRG | 1 cut(s) | 209 |
| BmgT120I | GGNCC | 5 cut(s) | 88, 117, 118, 487, 885 |
| BmiI | GGNNCC | 2 cut(s) | 89, 119 |
| BmsI | GCATC | 2 cut(s) | 784, 1267 |
| BmtI | GCTAGC | 1 cut(s) | 1065 |
| BpiI | GAAGAC | 1 cut(s) | 657 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 14, 46, 767, 799 |
| BpmI | CTGGAG | 3 cut(s) | 257, 947, 1255 |
| BpuEI | CTTGAG | 3 cut(s) | 125, 1022, 1146 |
| Bsa29I | ATCGAT | 1 cut(s) | 1419 |
| BsaAI | YACGTR | 1 cut(s) | 521 |
| BsaHI | GRCGYC | 4 cut(s) | 48, 75, 129, 761 |
| BsaI | GGTCTC | 1 cut(s) | 894 |
| BsaJI | CCNNGG | 5 cut(s) | 37, 258, 525, 1113, 1175 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 185, 215 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 84, 97, 259, 480, 1119 |
| Bse1I | ACTGG | 1 cut(s) | 274 |
| BseCI | ATCGAT | 1 cut(s) | 1419 |
| BseDI | CCNNGG | 5 cut(s) | 37, 258, 525, 1113, 1175 |
| BseGI | GGATG | 3 cut(s) | 322, 1128, 1234 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 84, 97, 259, 480, 1119 |
| BseMII | CTCAG | 4 cut(s) | 867, 1068, 1111, 1305 |
| BseNI | ACTGG | 1 cut(s) | 274 |
| BseRI | GAGGAG | 2 cut(s) | 788, 1364 |
| BseSI | GKGCMC | 1 cut(s) | 121 |
| BseX3I | CGGCCG | 1 cut(s) | 144 |
| Bsh1236I | CGCG | 1 cut(s) | 224 |
| Bsh1285I | CGRYCG | 1 cut(s) | 147 |
| BshFI | GGCC | 5 cut(s) | 71, 119, 146, 488, 1271 |
| BshVI | ATCGAT | 1 cut(s) | 1419 |
| BsiEI | CGRYCG | 1 cut(s) | 147 |
| BsiHKAI | GWGCWC | 2 cut(s) | 273, 780 |
| BsiHKCI | CYCGRG | 1 cut(s) | 209 |
| BslFI | GGGAC | 2 cut(s) | 101, 1157 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 84, 97, 259, 480, 1119 |
| BsmAI | GTCTC | 7 cut(s) | 19, 101, 623, 682, 894, 923, 977 |
| BsmBI | CGTCTC | 1 cut(s) | 19 |
| BsmFI | GGGAC | 2 cut(s) | 101, 1157 |
| BsmI | GAATGC | 1 cut(s) | 427 |
| BsnI | GGCC | 5 cut(s) | 71, 119, 146, 488, 1271 |
| Bso31I | GGTCTC | 1 cut(s) | 894 |
| BsoBI | CYCGRG | 1 cut(s) | 209 |
| Bsp120I | GGGCCC | 1 cut(s) | 117 |
| Bsp1286I | GDGCHC | 3 cut(s) | 121, 273, 780 |
| Bsp1407I | TGTACA | 1 cut(s) | 93 |
| Bsp143I | GATC | 5 cut(s) | 658, 915, 1018, 1416, 1420 |
| BspANI | GGCC | 5 cut(s) | 71, 119, 146, 488, 1271 |
| BspCNI | CTCAG | 4 cut(s) | 868, 1069, 1110, 1306 |
| BspDI | ATCGAT | 1 cut(s) | 1419 |
| BspFNI | CGCG | 1 cut(s) | 224 |
| BspHI | TCATGA | 1 cut(s) | 1288 |
| BspLI | GGNNCC | 2 cut(s) | 89, 119 |
| BspMAI | CTGCAG | 2 cut(s) | 805, 1018 |
| BspMI | ACCTGC | 1 cut(s) | 164 |
| BspOI | GCTAGC | 1 cut(s) | 1065 |
| BspQI | GCTCTTC | 2 cut(s) | 14, 807 |
| BspTNI | GGTCTC | 1 cut(s) | 894 |
| BsrBI | CCGCTC | 2 cut(s) | 7, 476 |
| BsrGI | TGTACA | 1 cut(s) | 93 |
| BsrI | ACTGG | 1 cut(s) | 274 |
| BssECI | CCNNGG | 5 cut(s) | 37, 258, 525, 1113, 1175 |
| BssMI | GATC | 5 cut(s) | 658, 915, 1018, 1416, 1420 |
| BssNI | GRCGYC | 4 cut(s) | 48, 75, 129, 761 |
| BssT1I | CCWWGG | 2 cut(s) | 525, 1175 |
| Bst4CI | ACNGT | 2 cut(s) | 112, 617 |
| Bst6I | CTCTTC | 4 cut(s) | 14, 170, 362, 807 |
| BstACI | GRCGYC | 4 cut(s) | 48, 75, 129, 761 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 986 |
| BstAUI | TGTACA | 1 cut(s) | 93 |
| BstBAI | YACGTR | 1 cut(s) | 521 |
| BstC8I | GCNNGC | 2 cut(s) | 642, 1063 |
| BstDEI | CTNAG | 5 cut(s) | 876, 1077, 1097, 1257, 1314 |
| BstDSI | CCRYGG | 1 cut(s) | 37 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 95, 257 |
| BstF5I | GGATG | 3 cut(s) | 322, 1128, 1234 |
| BstFNI | CGCG | 1 cut(s) | 224 |
| BstHHI | GCGC | 1 cut(s) | 226 |
| BstKTI | GATC | 5 cut(s) | 661, 918, 1021, 1419, 1423 |
| BstMAI | GTCTC | 7 cut(s) | 19, 101, 623, 682, 894, 923, 977 |
| BstMBI | GATC | 5 cut(s) | 658, 915, 1018, 1416, 1420 |
| BstMCI | CGRYCG | 1 cut(s) | 147 |
| BstNSI | RCATGY | 2 cut(s) | 537, 644 |
| BstSFI | CTRYAG | 2 cut(s) | 801, 1014 |
| BstSLI | GKGCMC | 1 cut(s) | 121 |
| BstUI | CGCG | 1 cut(s) | 224 |
| BstV2I | GAAGAC | 1 cut(s) | 657 |
| BstX2I | RGATCY | 1 cut(s) | 1018 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 308 |
| BstYI | RGATCY | 1 cut(s) | 1018 |
| BstZI | CGGCCG | 1 cut(s) | 144 |
| Bsu15I | ATCGAT | 1 cut(s) | 1419 |
| BsuRI | GGCC | 5 cut(s) | 71, 119, 146, 488, 1271 |
| BsuTUI | ATCGAT | 1 cut(s) | 1419 |
| BtgI | CCRYGG | 1 cut(s) | 37 |
| BtgZI | GCGATG | 1 cut(s) | 172 |
| BtsCI | GGATG | 3 cut(s) | 322, 1128, 1234 |
| BveI | ACCTGC | 1 cut(s) | 164 |
| Cac8I | GCNNGC | 2 cut(s) | 642, 1063 |
| CaiI | CAGNNNCTG | 1 cut(s) | 986 |
| CciI | TCATGA | 1 cut(s) | 1288 |
| CfoI | GCGC | 1 cut(s) | 226 |
| Cfr13I | GGNCC | 5 cut(s) | 88, 117, 118, 487, 885 |
| ClaI | ATCGAT | 1 cut(s) | 1419 |
| CseI | GACGC | 3 cut(s) | 56, 83, 137 |
| Csp6I | GTAC | 7 cut(s) | 94, 178, 455, 522, 537, 1110, 1261 |
| CviAII | CATG | 5 cut(s) | 534, 641, 1119, 1289, 1388 |
| CviQI | GTAC | 7 cut(s) | 94, 178, 455, 522, 537, 1110, 1261 |
| DdeI | CTNAG | 5 cut(s) | 876, 1077, 1097, 1257, 1314 |
| DpnI | GATC | 5 cut(s) | 660, 917, 1020, 1418, 1422 |
| DpnII | GATC | 5 cut(s) | 658, 915, 1018, 1416, 1420 |
| DraI | TTTAAA | 1 cut(s) | 717 |
| EaeI | YGGCCR | 1 cut(s) | 144 |
| EagI | CGGCCG | 1 cut(s) | 144 |
| Eam1104I | CTCTTC | 4 cut(s) | 14, 170, 362, 807 |
| EarI | CTCTTC | 4 cut(s) | 14, 170, 362, 807 |
| EciI | GGCGGA | 2 cut(s) | 77, 356 |
| Ecl136II | GAGCTC | 2 cut(s) | 271, 778 |
| EclXI | CGGCCG | 1 cut(s) | 144 |
| Eco130I | CCWWGG | 2 cut(s) | 525, 1175 |
| Eco24I | GRGCYC | 3 cut(s) | 121, 273, 780 |
| Eco31I | GGTCTC | 1 cut(s) | 894 |
| Eco47I | GGWCC | 2 cut(s) | 88, 885 |
| Eco52I | CGGCCG | 1 cut(s) | 144 |
| Eco53kI | GAGCTC | 2 cut(s) | 271, 778 |
| Eco57I | CTGAAG | 1 cut(s) | 215 |
| Eco88I | CYCGRG | 1 cut(s) | 209 |
| EcoICRI | GAGCTC | 2 cut(s) | 271, 778 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 95, 257 |
| EcoO109I | RGGNCCY | 2 cut(s) | 88, 117 |
| EcoRI | GAATTC | 2 cut(s) | 197, 1126 |
| EcoT14I | CCWWGG | 2 cut(s) | 525, 1175 |
| EcoT38I | GRGCYC | 3 cut(s) | 121, 273, 780 |
| ErhI | CCWWGG | 2 cut(s) | 525, 1175 |
| Esp3I | CGTCTC | 1 cut(s) | 19 |
| FaeI | CATG | 5 cut(s) | 537, 644, 1122, 1292, 1391 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1017, 1049 |
| FaqI | GGGAC | 2 cut(s) | 101, 1157 |
| FatI | CATG | 5 cut(s) | 533, 640, 1118, 1288, 1387 |
| FauI | CCCGC | 2 cut(s) | 41, 1218 |
| FokI | GGATG | 3 cut(s) | 329, 1135, 1241 |
| FriOI | GRGCYC | 3 cut(s) | 121, 273, 780 |
| FspBI | CTAG | 2 cut(s) | 708, 1062 |
| GlaI | GCGC | 1 cut(s) | 225 |
| GsuI | CTGGAG | 3 cut(s) | 257, 947, 1255 |
| HaeIII | GGCC | 5 cut(s) | 71, 119, 146, 488, 1271 |
| HgaI | GACGC | 3 cut(s) | 56, 83, 137 |
| HhaI | GCGC | 1 cut(s) | 226 |
| Hin1I | GRCGYC | 4 cut(s) | 48, 75, 129, 761 |
| Hin1II | CATG | 5 cut(s) | 537, 644, 1122, 1292, 1391 |
| Hin6I | GCGC | 1 cut(s) | 224 |
| HinP1I | GCGC | 1 cut(s) | 224 |
| HincII | GTYRAC | 2 cut(s) | 600, 613 |
| HindII | GTYRAC | 2 cut(s) | 600, 613 |
| HindIII | AAGCTT | 1 cut(s) | 848 |
| HinfI | GANTC | 6 cut(s) | 212, 940, 1136, 1180, 1237, 1310 |
| HpaI | GTTAAC | 2 cut(s) | 600, 613 |
| Hpy166II | GTNNAC | 2 cut(s) | 600, 613 |
| Hpy188I | TCNGA | 7 cut(s) | 19, 217, 259, 352, 466, 877, 1315 |
| Hpy188III | TCNNGA | 4 cut(s) | 86, 926, 1197, 1289 |
| Hpy8I | GTNNAC | 2 cut(s) | 600, 613 |
| Hpy99I | CGWCG | 5 cut(s) | 23, 50, 77, 131, 197 |
| HpyAV | CCTTC | 5 cut(s) | 307, 902, 1000, 1296, 1300 |
| HpyCH4III | ACNGT | 2 cut(s) | 112, 617 |
| HpyCH4IV | ACGT | 2 cut(s) | 520, 761 |
| HpyCH4V | TGCA | 8 cut(s) | 358, 533, 677, 803, 989, 1016, 1244, 1327 |
| HpyF3I | CTNAG | 5 cut(s) | 876, 1077, 1097, 1257, 1314 |
| HpySE526I | ACGT | 2 cut(s) | 520, 761 |
| Hsp92I | GRCGYC | 4 cut(s) | 48, 75, 129, 761 |
| Hsp92II | CATG | 5 cut(s) | 537, 644, 1122, 1292, 1391 |
| HspAI | GCGC | 1 cut(s) | 224 |
| KspAI | GTTAAC | 2 cut(s) | 600, 613 |
| Kzo9I | GATC | 5 cut(s) | 658, 915, 1018, 1416, 1420 |
| LguI | GCTCTTC | 2 cut(s) | 14, 807 |
| LmnI | GCTCC | 7 cut(s) | 100, 164, 276, 297, 391, 775, 783 |
| LweI | GCATC | 2 cut(s) | 784, 1267 |
| MaeI | CTAG | 2 cut(s) | 708, 1062 |
| MaeII | ACGT | 2 cut(s) | 520, 761 |
| MalI | GATC | 5 cut(s) | 660, 917, 1020, 1418, 1422 |
| MbiI | CCGCTC | 2 cut(s) | 7, 476 |
| MboI | GATC | 5 cut(s) | 658, 915, 1018, 1416, 1420 |
| MboII | GAAGA | 7 cut(s) | 157, 379, 453, 657, 824, 1079, 1082 |
| MflI | RGATCY | 1 cut(s) | 1018 |
| MhlI | GDGCHC | 3 cut(s) | 121, 273, 780 |
| MluCI | AATT | 7 cut(s) | 197, 353, 512, 692, 743, 1126, 1343 |
| MlyI | GAGTC | 2 cut(s) | 221, 1246 |
| MmeI | TCCRAC | 2 cut(s) | 42, 330 |
| MslI | CAYNNNNRTG | 1 cut(s) | 645 |
| MspA1I | CMGCKG | 1 cut(s) | 249 |
| Mva1269I | GAATGC | 1 cut(s) | 427 |
| MvnI | CGCG | 1 cut(s) | 224 |
| NdeII | GATC | 5 cut(s) | 658, 915, 1018, 1416, 1420 |
| NheI | GCTAGC | 1 cut(s) | 1061 |
| NlaIII | CATG | 5 cut(s) | 537, 644, 1122, 1292, 1391 |
| NlaIV | GGNNCC | 2 cut(s) | 89, 119 |
| NmeAIII | GCCGAG | 1 cut(s) | 292 |
| NspI | RCATGY | 2 cut(s) | 537, 644 |
| PaeI | GCATGC | 1 cut(s) | 644 |
| PaeR7I | CTCGAG | 1 cut(s) | 209 |
| PagI | TCATGA | 1 cut(s) | 1288 |
| PciSI | GCTCTTC | 2 cut(s) | 14, 807 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 18 |
| PctI | GAATGC | 1 cut(s) | 427 |
| PfeI | GAWTC | 4 cut(s) | 940, 1136, 1180, 1310 |
| PflFI | GACNNNGTC | 1 cut(s) | 50 |
| PleI | GAGTC | 2 cut(s) | 220, 1245 |
| PpsI | GAGTC | 2 cut(s) | 220, 1245 |
| Ppu21I | YACGTR | 1 cut(s) | 521 |
| PpuMI | RGGWCCY | 1 cut(s) | 88 |
| Psp124BI | GAGCTC | 2 cut(s) | 273, 780 |
| Psp5II | RGGWCCY | 1 cut(s) | 88 |
| PspN4I | GGNNCC | 2 cut(s) | 89, 119 |
| PspOMI | GGGCCC | 1 cut(s) | 117 |
| PspPI | GGNCC | 5 cut(s) | 88, 117, 118, 487, 885 |
| PspPPI | RGGWCCY | 1 cut(s) | 88 |
| PspXI | VCTCGAGB | 1 cut(s) | 209 |
| PstI | CTGCAG | 2 cut(s) | 805, 1018 |
| PstNI | CAGNNNCTG | 1 cut(s) | 986 |
| PsuI | RGATCY | 1 cut(s) | 1018 |
| PsyI | GACNNNGTC | 1 cut(s) | 50 |
| PvuII | CAGCTG | 1 cut(s) | 249 |
| RsaI | GTAC | 7 cut(s) | 95, 179, 456, 523, 538, 1111, 1262 |
| RsaNI | GTAC | 7 cut(s) | 94, 178, 455, 522, 537, 1110, 1261 |
| RseI | CAYNNNNRTG | 1 cut(s) | 645 |
| SacI | GAGCTC | 2 cut(s) | 273, 780 |
| SapI | GCTCTTC | 2 cut(s) | 14, 807 |
| Sau3AI | GATC | 5 cut(s) | 658, 915, 1018, 1416, 1420 |
| Sau96I | GGNCC | 5 cut(s) | 88, 117, 118, 487, 885 |
| SchI | GAGTC | 2 cut(s) | 221, 1246 |
| SduI | GDGCHC | 3 cut(s) | 121, 273, 780 |
| SfaNI | GCATC | 2 cut(s) | 784, 1267 |
| SfcI | CTRYAG | 2 cut(s) | 801, 1014 |
| Sfr274I | CTCGAG | 1 cut(s) | 209 |
| SinI | GGWCC | 2 cut(s) | 88, 885 |
| SlaI | CTCGAG | 1 cut(s) | 209 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 645 |
| SmlI | CTYRAG | 4 cut(s) | 104, 209, 1001, 1161 |
| SmoI | CTYRAG | 4 cut(s) | 104, 209, 1001, 1161 |
| SphI | GCATGC | 1 cut(s) | 644 |
| Sse9I | AATT | 7 cut(s) | 197, 353, 512, 692, 743, 1126, 1343 |
| SspMI | CTAG | 2 cut(s) | 708, 1062 |
| SstI | GAGCTC | 2 cut(s) | 273, 780 |
| StyI | CCWWGG | 2 cut(s) | 525, 1175 |
| TaaI | ACNGT | 2 cut(s) | 112, 617 |
| TaiI | ACGT | 2 cut(s) | 523, 764 |
| TaqI | TCGA | 8 cut(s) | 168, 210, 243, 365, 444, 914, 1056, 1419 |
| TasI | AATT | 7 cut(s) | 197, 353, 512, 692, 743, 1126, 1343 |
| TatI | WGTACW | 3 cut(s) | 93, 454, 536 |
| TauI | GCSGC | 3 cut(s) | 7, 134, 476 |
| TfiI | GAWTC | 4 cut(s) | 940, 1136, 1180, 1310 |
| TspDTI | ATGAA | 6 cut(s) | 825, 1119, 1139, 1356, 1389, 1398 |
| Tth111I | GACNNNGTC | 1 cut(s) | 50 |
| VpaK11BI | GGWCC | 2 cut(s) | 88, 885 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 95, 257 |
| XapI | RAATTY | 2 cut(s) | 197, 1126 |
| XceI | RCATGY | 2 cut(s) | 537, 644 |
| XhoI | CTCGAG | 1 cut(s) | 209 |
| XspI | CTAG | 2 cut(s) | 708, 1062 |
| ZraI | GACGTC | 1 cut(s) | 762 |