Nuclear-pore
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79280 AT1G79280 AT1G79280 |
| fragaria_vesca | FvH4_3g13850 FvH4_3g13850 |
| malus_domestica | MD05G1240600.v1.1 MD10G1218600.v1.1 MD10G1218800.v1.1 MD10G1219000.v1.1 |
| prunus_persica | Prupe.4G125000_v2.0.a1 Prupe.4G125000_v2.0.a1 Prupe.4G125000_v2.0.a1 |
| pyrus_communis | pycom05g21650 pycom05g21660 pycom05g21670 pycom05g21680 pycom09g00980 pycom10g18440 pycom10g18450 |
| rosa_chinensis | RchiOBHm_Chr5g0023031 |
| rosa_laevigata | RLG00000032692 RLG00000032694 |
| rosa_multiflora | Rmu_co8489363.1_g000001 Rmu_sc0002675.1_g000017 Rmu_sc0003955.1_g000002 Rmu_sc0015264.1_g000001 Rmu_sc0015264.1_g000002 Rmu_sc0017996.1_g000001 Rmu_sc0029290.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00056280 Rroxscaffold_7G00176540 |
| rosa_rugosa | Rorug05G0076700 |
| rosa_samantha | Rh5AG163000 Rh5BG162200 Rh5CG176900 Rh5DG163500 |
| rosa_wichuraiana | Rw5G014700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4199 |
| AarI | CACCTGC | 1 cut(s) | 5146 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 346 |
| AatII | GACGTC | 1 cut(s) | 51 |
| Acc36I | ACCTGC | 4 cut(s) | 164, 3853, 5146, 5869 |
| Acc65I | GGTACC | 1 cut(s) | 4541 |
| AccB1I | GGYRCC | 3 cut(s) | 1171, 4541, 5377 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2836 |
| AccBSI | CCGCTC | 1 cut(s) | 7 |
| AccII | CGCG | 5 cut(s) | 77, 224, 3588, 4040, 5261 |
| AccIII | TCCGGA | 1 cut(s) | 84 |
| AclI | AACGTT | 1 cut(s) | 4821 |
| AclWI | GGATC | 4 cut(s) | 2563, 4116, 4235, 5365 |
| AcoI | YGGCCR | 3 cut(s) | 34, 1398, 3282 |
| AcyI | GRCGYC | 3 cut(s) | 48, 129, 4953 |
| AdeI | CACNNNGTG | 3 cut(s) | 3497, 4889, 6020 |
| AflIII | ACRYGT | 2 cut(s) | 75, 4005 |
| AjiI | CACGTC | 2 cut(s) | 6026, 6059 |
| AjnI | CCWGG | 5 cut(s) | 2096, 2526, 2940, 3158, 5515 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 2957, 2989, 3477, 3509, 3755, 3787, 4391, 4423 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1766, 1798 |
| Alw21I | GWGCWC | 5 cut(s) | 264, 1644, 1809, 3273, 6031 |
| Alw44I | GTGCAC | 2 cut(s) | 1640, 3269 |
| AlwI | GGATC | 4 cut(s) | 2563, 4116, 4235, 5365 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1445, 4294, 5081 |
| Ama87I | CYCGRG | 4 cut(s) | 167, 209, 443, 2760 |
| Aor13HI | TCCGGA | 1 cut(s) | 84 |
| ApaLI | GTGCAC | 2 cut(s) | 1640, 3269 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1502, 1534 |
| AseI | ATTAAT | 1 cut(s) | 309 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1890, 3313 |
| Asp718I | GGTACC | 1 cut(s) | 4541 |
| AspLEI | GCGC | 5 cut(s) | 121, 226, 252, 3000, 5600 |
| AspS9I | GGNCC | 7 cut(s) | 487, 885, 2041, 4357, 4857, 5063, 6062 |
| AsuII | TTCGAA | 1 cut(s) | 4996 |
| AsuNHI | GCTAGC | 1 cut(s) | 2030 |
| AvaI | CYCGRG | 4 cut(s) | 167, 209, 443, 2760 |
| AvaII | GGWCC | 3 cut(s) | 885, 4357, 5063 |
| AxyI | CCTNAGG | 1 cut(s) | 4536 |
| BaeGI | GKGCMC | 4 cut(s) | 1644, 3273, 3463, 5382 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4533, 4566 |
| BanI | GGYRCC | 3 cut(s) | 1171, 4541, 5377 |
| BanII | GRGCYC | 4 cut(s) | 264, 1809, 4921, 5415 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5655, 5687 |
| BauI | CACGAG | 2 cut(s) | 5033, 6030 |
| BbsI | GAAGAC | 8 cut(s) | 344, 1031, 1079, 2099, 2976, 4397, 4523, 6013 |
| Bbv12I | GWGCWC | 5 cut(s) | 264, 1644, 1809, 3273, 6031 |
| BbvCI | CCTCAGC | 4 cut(s) | 504, 1152, 2307, 2478 |
| BceAI | ACGGC | 1 cut(s) | 4773 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1925, 1959, 5708, 5742 |
| BciT130I | CCWGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| BclI | TGATCA | 4 cut(s) | 915, 1416, 1470, 6076 |
| BfoI | RGCGCY | 2 cut(s) | 253, 5601 |
| BfuAI | ACCTGC | 4 cut(s) | 164, 3853, 5146, 5869 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3467 |
| BglII | AGATCT | 4 cut(s) | 1018, 2083, 3952, 5587 |
| BlpI | GCTNAGC | 2 cut(s) | 3501, 5934 |
| BmcAI | AGTACT | 1 cut(s) | 5809 |
| Bme1390I | CCNGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| Bme18I | GGWCC | 3 cut(s) | 885, 4357, 5063 |
| BmeT110I | CYCGRG | 4 cut(s) | 167, 209, 443, 2760 |
| BmgBI | CACGTC | 2 cut(s) | 6026, 6059 |
| BmgT120I | GGNCC | 7 cut(s) | 487, 885, 2041, 4357, 4857, 5063, 6062 |
| BmiI | GGNNCC | 8 cut(s) | 89, 1173, 4543, 4570, 4859, 5379, 5412, 6064 |
| BmrFI | CCNGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| BmtI | GCTAGC | 1 cut(s) | 2034 |
| BpiI | GAAGAC | 8 cut(s) | 344, 1031, 1079, 2099, 2976, 4397, 4523, 6013 |
| Bpu10I | CCTNAGC | 6 cut(s) | 504, 1152, 1730, 2307, 2478, 5538 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3501, 5934 |
| Bpu14I | TTCGAA | 1 cut(s) | 4996 |
| Bsa29I | ATCGAT | 1 cut(s) | 5718 |
| BsaAI | YACGTR | 2 cut(s) | 1226, 2597 |
| BsaBI | GATNNNNATC | 3 cut(s) | 3442, 3831, 5586 |
| BsaHI | GRCGYC | 3 cut(s) | 48, 129, 4953 |
| BsaI | GGTCTC | 1 cut(s) | 2800 |
| BsaJI | CCNNGG | 5 cut(s) | 525, 1401, 2940, 5050, 5259 |
| BsaWI | WCCGGW | 2 cut(s) | 84, 4235 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 4699, 4729 |
| Bse1I | ACTGG | 8 cut(s) | 433, 3264, 3331, 4581, 4682, 5065, 5430, 5841 |
| Bse21I | CCTNAGG | 1 cut(s) | 4536 |
| Bse3DI | GCAATG | 6 cut(s) | 1914, 2581, 3186, 4169, 4344, 5167 |
| Bse8I | GATNNNNATC | 3 cut(s) | 3442, 3831, 5586 |
| BseAI | TCCGGA | 1 cut(s) | 84 |
| BseBI | CCWGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| BseCI | ATCGAT | 1 cut(s) | 5718 |
| BseDI | CCNNGG | 5 cut(s) | 525, 1401, 2940, 5050, 5259 |
| BseJI | GATNNNNATC | 3 cut(s) | 3442, 3831, 5586 |
| BseMI | GCAATG | 6 cut(s) | 1914, 2581, 3186, 4169, 4344, 5167 |
| BseNI | ACTGG | 8 cut(s) | 433, 3264, 3331, 4581, 4682, 5065, 5430, 5841 |
| BseRI | GAGGAG | 6 cut(s) | 38, 155, 1946, 2324, 3551, 5103 |
| BseSI | GKGCMC | 4 cut(s) | 1644, 3273, 3463, 5382 |
| BseYI | CCCAGC | 2 cut(s) | 1725, 4247 |
| BsgI | GTGCAG | 3 cut(s) | 293, 341, 2988 |
| Bsh1236I | CGCG | 5 cut(s) | 77, 224, 3588, 4040, 5261 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1275 |
| BshNI | GGYRCC | 3 cut(s) | 1171, 4541, 5377 |
| BshVI | ATCGAT | 1 cut(s) | 5718 |
| BsiEI | CGRYCG | 1 cut(s) | 1275 |
| BsiHKAI | GWGCWC | 5 cut(s) | 264, 1644, 1809, 3273, 6031 |
| BsiHKCI | CYCGRG | 4 cut(s) | 167, 209, 443, 2760 |
| BsiSI | CCGG | 3 cut(s) | 33, 85, 4236 |
| BslFI | GGGAC | 3 cut(s) | 1941, 2812, 5973 |
| BsmBI | CGTCTC | 3 cut(s) | 19, 36, 4901 |
| BsmFI | GGGAC | 3 cut(s) | 1941, 2812, 5973 |
| BsmI | GAATGC | 4 cut(s) | 475, 1726, 3641, 5935 |
| Bso31I | GGTCTC | 1 cut(s) | 2800 |
| BsoBI | CYCGRG | 4 cut(s) | 167, 209, 443, 2760 |
| Bsp119I | TTCGAA | 1 cut(s) | 4996 |
| Bsp1286I | GDGCHC | 9 cut(s) | 264, 1644, 1809, 3273, 3463, 4921, 5382, 5415, 6031 |
| Bsp13I | TCCGGA | 1 cut(s) | 84 |
| Bsp1407I | TGTACA | 2 cut(s) | 1251, 1911 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3501, 5934 |
| BspDI | ATCGAT | 1 cut(s) | 5718 |
| BspEI | TCCGGA | 1 cut(s) | 84 |
| BspFNI | CGCG | 5 cut(s) | 77, 224, 3588, 4040, 5261 |
| BspHI | TCATGA | 2 cut(s) | 1288, 1612 |
| BspLI | GGNNCC | 8 cut(s) | 89, 1173, 4543, 4570, 4859, 5379, 5412, 6064 |
| BspMAI | CTGCAG | 7 cut(s) | 802, 1018, 2059, 2436, 2848, 4675, 5731 |
| BspMI | ACCTGC | 4 cut(s) | 164, 3853, 5146, 5869 |
| BspOI | GCTAGC | 1 cut(s) | 2034 |
| BspPI | GGATC | 4 cut(s) | 2563, 4116, 4235, 5365 |
| BspQI | GCTCTTC | 3 cut(s) | 14, 1860, 5268 |
| BspT104I | TTCGAA | 1 cut(s) | 4996 |
| BspT107I | GGYRCC | 3 cut(s) | 1171, 4541, 5377 |
| BspTNI | GGTCTC | 1 cut(s) | 2800 |
| BsrBI | CCGCTC | 1 cut(s) | 7 |
| BsrDI | GCAATG | 6 cut(s) | 1914, 2581, 3186, 4169, 4344, 5167 |
| BsrGI | TGTACA | 2 cut(s) | 1251, 1911 |
| BsrI | ACTGG | 8 cut(s) | 433, 3264, 3331, 4581, 4682, 5065, 5430, 5841 |
| BssECI | CCNNGG | 5 cut(s) | 525, 1401, 2940, 5050, 5259 |
| BssNI | GRCGYC | 3 cut(s) | 48, 129, 4953 |
| BssSI | CACGAG | 2 cut(s) | 5033, 6030 |
| BssT1I | CCWWGG | 2 cut(s) | 525, 5050 |
| Bst2BI | CACGAG | 2 cut(s) | 5033, 6030 |
| Bst2UI | CCWGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| BstACI | GRCGYC | 3 cut(s) | 48, 129, 4953 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2597 |
| BstAUI | TGTACA | 2 cut(s) | 1251, 1911 |
| BstBAI | YACGTR | 2 cut(s) | 1226, 2597 |
| BstBI | TTCGAA | 1 cut(s) | 4996 |
| BstDSI | CCRYGG | 1 cut(s) | 5259 |
| BstFNI | CGCG | 5 cut(s) | 77, 224, 3588, 4040, 5261 |
| BstH2I | RGCGCY | 2 cut(s) | 253, 5601 |
| BstHHI | GCGC | 5 cut(s) | 121, 226, 252, 3000, 5600 |
| BstMCI | CGRYCG | 1 cut(s) | 1275 |
| BstNI | CCWGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| BstNSI | RCATGY | 8 cut(s) | 644, 2378, 2659, 3732, 4009, 4092, 4259, 4520 |
| BstSCI | CCNGG | 5 cut(s) | 2096, 2526, 2940, 3158, 5515 |
| BstSLI | GKGCMC | 4 cut(s) | 1644, 3273, 3463, 5382 |
| BstUI | CGCG | 5 cut(s) | 77, 224, 3588, 4040, 5261 |
| BstV2I | GAAGAC | 8 cut(s) | 344, 1031, 1079, 2099, 2976, 4397, 4523, 6013 |
| BstX2I | RGATCY | 6 cut(s) | 1018, 2083, 2555, 3952, 4108, 5587 |
| BstYI | RGATCY | 6 cut(s) | 1018, 2083, 2555, 3952, 4108, 5587 |
| Bsu15I | ATCGAT | 1 cut(s) | 5718 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4536 |
| BsuTUI | ATCGAT | 1 cut(s) | 5718 |
| BtgI | CCRYGG | 1 cut(s) | 5259 |
| BtgZI | GCGATG | 2 cut(s) | 3007, 4340 |
| BtrI | CACGTC | 2 cut(s) | 6026, 6059 |
| BtsI | GCAGTG | 3 cut(s) | 3000, 4292, 5736 |
| BveI | ACCTGC | 4 cut(s) | 164, 3853, 5146, 5869 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1445, 4294, 5081 |
| CciI | TCATGA | 2 cut(s) | 1288, 1612 |
| CfoI | GCGC | 5 cut(s) | 121, 226, 252, 3000, 5600 |
| Cfr13I | GGNCC | 7 cut(s) | 487, 885, 2041, 4357, 4857, 5063, 6062 |
| Cfr42I | CCGCGG | 1 cut(s) | 5262 |
| ClaI | ATCGAT | 1 cut(s) | 5718 |
| CseI | GACGC | 8 cut(s) | 83, 137, 1274, 3272, 3668, 4046, 4961, 6029 |
| DraIII | CACNNNGTG | 3 cut(s) | 3497, 4889, 6020 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 346 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 346 |
| EaeI | YGGCCR | 3 cut(s) | 34, 1398, 3282 |
| EciI | GGCGGA | 2 cut(s) | 77, 5941 |
| Ecl136II | GAGCTC | 2 cut(s) | 262, 1807 |
| Eco130I | CCWWGG | 2 cut(s) | 525, 5050 |
| Eco24I | GRGCYC | 4 cut(s) | 264, 1809, 4921, 5415 |
| Eco31I | GGTCTC | 1 cut(s) | 2800 |
| Eco32I | GATATC | 2 cut(s) | 2524, 3411 |
| Eco47I | GGWCC | 3 cut(s) | 885, 4357, 5063 |
| Eco53kI | GAGCTC | 2 cut(s) | 262, 1807 |
| Eco81I | CCTNAGG | 1 cut(s) | 4536 |
| Eco88I | CYCGRG | 4 cut(s) | 167, 209, 443, 2760 |
| EcoICRI | GAGCTC | 2 cut(s) | 262, 1807 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4357 |
| EcoRI | GAATTC | 2 cut(s) | 1126, 5626 |
| EcoRII | CCWGG | 5 cut(s) | 2096, 2526, 2940, 3158, 5515 |
| EcoRV | GATATC | 2 cut(s) | 2524, 3411 |
| EcoT14I | CCWWGG | 2 cut(s) | 525, 5050 |
| EcoT22I | ATGCAT | 2 cut(s) | 2698, 5479 |
| EcoT38I | GRGCYC | 4 cut(s) | 264, 1809, 4921, 5415 |
| ErhI | CCWWGG | 2 cut(s) | 525, 5050 |
| Esp3I | CGTCTC | 3 cut(s) | 19, 36, 4901 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2957, 2989, 3477, 3509, 4515, 4547 |
| FaqI | GGGAC | 3 cut(s) | 1941, 2812, 5973 |
| FauI | CCCGC | 1 cut(s) | 889 |
| FbaI | TGATCA | 4 cut(s) | 915, 1416, 1470, 6076 |
| FriOI | GRGCYC | 4 cut(s) | 264, 1809, 4921, 5415 |
| GlaI | GCGC | 5 cut(s) | 120, 225, 251, 2999, 5599 |
| GsaI | CCCAGC | 2 cut(s) | 1729, 4251 |
| HaeII | RGCGCY | 2 cut(s) | 253, 5601 |
| HapII | CCGG | 3 cut(s) | 33, 85, 4236 |
| HgaI | GACGC | 8 cut(s) | 83, 137, 1274, 3272, 3668, 4046, 4961, 6029 |
| HhaI | GCGC | 5 cut(s) | 121, 226, 252, 3000, 5600 |
| Hin1I | GRCGYC | 3 cut(s) | 48, 129, 4953 |
| Hin6I | GCGC | 5 cut(s) | 119, 224, 250, 2998, 5598 |
| HinP1I | GCGC | 5 cut(s) | 119, 224, 250, 2998, 5598 |
| HincII | GTYRAC | 7 cut(s) | 613, 2260, 2328, 3060, 3257, 5309, 5854 |
| HindII | GTYRAC | 7 cut(s) | 613, 2260, 2328, 3060, 3257, 5309, 5854 |
| HindIII | AAGCTT | 6 cut(s) | 671, 848, 2865, 3075, 5007, 5181 |
| HpaII | CCGG | 3 cut(s) | 33, 85, 4236 |
| Hpy99I | CGWCG | 8 cut(s) | 50, 53, 77, 131, 248, 3384, 4172, 6045 |
| HpyCH4IV | ACGT | 9 cut(s) | 48, 1225, 1507, 2596, 3382, 4821, 5002, 6025, 6058 |
| HpySE526I | ACGT | 9 cut(s) | 48, 1225, 1507, 2596, 3382, 4821, 5002, 6025, 6058 |
| Hsp92I | GRCGYC | 3 cut(s) | 48, 129, 4953 |
| HspAI | GCGC | 5 cut(s) | 119, 224, 250, 2998, 5598 |
| Kpn2I | TCCGGA | 1 cut(s) | 84 |
| KpnI | GGTACC | 1 cut(s) | 4545 |
| Ksp22I | TGATCA | 4 cut(s) | 915, 1416, 1470, 6076 |
| KspI | CCGCGG | 1 cut(s) | 5262 |
| LguI | GCTCTTC | 3 cut(s) | 14, 1860, 5268 |
| MaeII | ACGT | 9 cut(s) | 48, 1225, 1507, 2596, 3382, 4821, 5002, 6025, 6058 |
| MaeIII | GTNAC | 6 cut(s) | 1226, 1508, 2129, 3680, 3792, 3865 |
| MbiI | CCGCTC | 1 cut(s) | 7 |
| MfeI | CAATTG | 3 cut(s) | 3278, 5280, 5970 |
| MflI | RGATCY | 6 cut(s) | 1018, 2083, 2555, 3952, 4108, 5587 |
| MhlI | GDGCHC | 9 cut(s) | 264, 1644, 1809, 3273, 3463, 4921, 5382, 5415, 6031 |
| MluI | ACGCGT | 1 cut(s) | 75 |
| MlyI | GAGTC | 9 cut(s) | 221, 949, 1093, 1246, 1430, 1744, 2300, 4744, 5036 |
| MmeI | TCCRAC | 3 cut(s) | 3625, 4188, 6008 |
| Mph1103I | ATGCAT | 2 cut(s) | 2698, 5479 |
| MroI | TCCGGA | 1 cut(s) | 84 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1890, 3313 |
| MslI | CAYNNNNRTG | 3 cut(s) | 645, 1506, 3746 |
| MspA1I | CMGCKG | 5 cut(s) | 2269, 2849, 5261, 5687, 5789 |
| MspI | CCGG | 3 cut(s) | 33, 85, 4236 |
| MspR9I | CCNGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| MunI | CAATTG | 3 cut(s) | 3278, 5280, 5970 |
| Mva1269I | GAATGC | 4 cut(s) | 475, 1726, 3641, 5935 |
| MvaI | CCWGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| MvnI | CGCG | 5 cut(s) | 77, 224, 3588, 4040, 5261 |
| NheI | GCTAGC | 1 cut(s) | 2030 |
| NlaIV | GGNNCC | 8 cut(s) | 89, 1173, 4543, 4570, 4859, 5379, 5412, 6064 |
| NmeAIII | GCCGAG | 3 cut(s) | 172, 1426, 3310 |
| NmuCI | GTSAC | 4 cut(s) | 1226, 1508, 2129, 3680 |
| NsiI | ATGCAT | 2 cut(s) | 2698, 5479 |
| NspI | RCATGY | 8 cut(s) | 644, 2378, 2659, 3732, 4009, 4092, 4259, 4520 |
| NspV | TTCGAA | 1 cut(s) | 4996 |
| PaeI | GCATGC | 3 cut(s) | 644, 4259, 4520 |
| PaeR7I | CTCGAG | 4 cut(s) | 167, 209, 443, 2760 |
| PagI | TCATGA | 2 cut(s) | 1288, 1612 |
| PaqCI | CACCTGC | 1 cut(s) | 5146 |
| PciI | ACATGT | 1 cut(s) | 4005 |
| PciSI | GCTCTTC | 3 cut(s) | 14, 1860, 5268 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 18, 3502, 6037, 6049 |
| PctI | GAATGC | 4 cut(s) | 475, 1726, 3641, 5935 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1890, 3313 |
| PflFI | GACNNNGTC | 2 cut(s) | 47, 110 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2836 |
| PleI | GAGTC | 9 cut(s) | 220, 948, 1092, 1245, 1430, 1743, 2299, 4744, 5035 |
| PpsI | GAGTC | 9 cut(s) | 220, 948, 1092, 1245, 1430, 1743, 2299, 4744, 5035 |
| Ppu21I | YACGTR | 2 cut(s) | 1226, 2597 |
| PpuMI | RGGWCCY | 1 cut(s) | 4357 |
| PscI | ACATGT | 1 cut(s) | 4005 |
| PshBI | ATTAAT | 1 cut(s) | 309 |
| PsiI | TTATAA | 1 cut(s) | 4199 |
| Psp124BI | GAGCTC | 2 cut(s) | 264, 1809 |
| Psp1406I | AACGTT | 1 cut(s) | 4821 |
| Psp5II | RGGWCCY | 1 cut(s) | 4357 |
| Psp6I | CCWGG | 5 cut(s) | 2096, 2526, 2940, 3158, 5515 |
| PspFI | CCCAGC | 2 cut(s) | 1725, 4247 |
| PspGI | CCWGG | 5 cut(s) | 2096, 2526, 2940, 3158, 5515 |
| PspN4I | GGNNCC | 8 cut(s) | 89, 1173, 4543, 4570, 4859, 5379, 5412, 6064 |
| PspPI | GGNCC | 7 cut(s) | 487, 885, 2041, 4357, 4857, 5063, 6062 |
| PspPPI | RGGWCCY | 1 cut(s) | 4357 |
| PspXI | VCTCGAGB | 2 cut(s) | 167, 209 |
| PstI | CTGCAG | 7 cut(s) | 802, 1018, 2059, 2436, 2848, 4675, 5731 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1445, 4294, 5081 |
| PsuI | RGATCY | 6 cut(s) | 1018, 2083, 2555, 3952, 4108, 5587 |
| PsyI | GACNNNGTC | 2 cut(s) | 47, 110 |
| PvuII | CAGCTG | 1 cut(s) | 5687 |
| RseI | CAYNNNNRTG | 3 cut(s) | 645, 1506, 3746 |
| SacI | GAGCTC | 2 cut(s) | 264, 1809 |
| SacII | CCGCGG | 1 cut(s) | 5262 |
| SapI | GCTCTTC | 3 cut(s) | 14, 1860, 5268 |
| Sau96I | GGNCC | 7 cut(s) | 487, 885, 2041, 4357, 4857, 5063, 6062 |
| ScaI | AGTACT | 1 cut(s) | 5809 |
| SchI | GAGTC | 9 cut(s) | 221, 949, 1093, 1246, 1430, 1744, 2300, 4744, 5036 |
| ScrFI | CCNGG | 5 cut(s) | 2098, 2528, 2942, 3160, 5517 |
| SduI | GDGCHC | 9 cut(s) | 264, 1644, 1809, 3273, 3463, 4921, 5382, 5415, 6031 |
| Sfr274I | CTCGAG | 4 cut(s) | 167, 209, 443, 2760 |
| Sfr303I | CCGCGG | 1 cut(s) | 5262 |
| SfuI | TTCGAA | 1 cut(s) | 4996 |
| SgrBI | CCGCGG | 1 cut(s) | 5262 |
| SinI | GGWCC | 3 cut(s) | 885, 4357, 5063 |
| SlaI | CTCGAG | 4 cut(s) | 167, 209, 443, 2760 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 645, 1506, 3746 |
| SphI | GCATGC | 3 cut(s) | 644, 4259, 4520 |
| SspI | AATATT | 2 cut(s) | 2155, 3246 |
| SstI | GAGCTC | 2 cut(s) | 264, 1809 |
| StyD4I | CCNGG | 5 cut(s) | 2096, 2526, 2940, 3158, 5515 |
| StyI | CCWWGG | 2 cut(s) | 525, 5050 |
| TaiI | ACGT | 9 cut(s) | 51, 1228, 1510, 2599, 3385, 4824, 5005, 6028, 6061 |
| TatI | WGTACW | 5 cut(s) | 536, 1251, 1911, 3216, 5807 |
| TauI | GCSGC | 3 cut(s) | 7, 134, 2852 |
| TseFI | GTSAC | 4 cut(s) | 1226, 1508, 2129, 3680 |
| Tsp45I | GTSAC | 4 cut(s) | 1226, 1508, 2129, 3680 |
| TspGWI | ACGGA | 6 cut(s) | 113, 356, 703, 1490, 2284, 4925 |
| Tth111I | GACNNNGTC | 2 cut(s) | 47, 110 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2836 |
| VneI | GTGCAC | 2 cut(s) | 1640, 3269 |
| VpaK11BI | GGWCC | 3 cut(s) | 885, 4357, 5063 |
| VspI | ATTAAT | 1 cut(s) | 309 |
| XbaI | TCTAGA | 1 cut(s) | 1835 |
| XceI | RCATGY | 8 cut(s) | 644, 2378, 2659, 3732, 4009, 4092, 4259, 4520 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 5057 |
| XhoI | CTCGAG | 4 cut(s) | 167, 209, 443, 2760 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1890, 3313 |
| ZraI | GACGTC | 1 cut(s) | 49 |
| ZrmI | AGTACT | 1 cut(s) | 5809 |
| Zsp2I | ATGCAT | 2 cut(s) | 2698, 5479 |