pycom05g21660

Nuclear-pore

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0003251
Physical Location & Seq
Forward (+)
24220981 .. 24240222
19242 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g21660.15

Sequence Viewer

Length: 3447 bp
ATGTTTGCACGAAAAGAGATTGCTGATCTCCAGCGAGAGGTGACAATCCTTCTGAAGGAATGCCGTGATATACAGCTTCGTGGGACATCATCTGGTCATGATAGTCATGACTATGATACTGTTGCCGTTGTTGAGATGAACACTGAATCTGATGCCGAGAGAGTGATATCTGAACATCTGTTGACCTTCAAGGACATAAATGGACTAGTTGATCAGAATGTGCAGCTTAGGAGCCTTGTTCGGAATCTTTCTGACCAGCTTGAAAATAGGGAAATGGAGTTCAAGGAGAATTTTGAAATGGAGATCAAGAAGCACACTGATGAAGCTGCCTCTAGAGTTGCGGCAGTGTTACAAAGAGCTGAAGAACAAGGGCGCATGATTGAATCCCTTCACACCTCTGTTGCAATGTACAAAAGGCTATATGAAGAGGAGCATAAACTTCATTCTTCTAGTCCTTGTATAGAAGAGGCTGCTCCAGAAGAAAGAAGAACTGGCGTCAAGCTTCTTTTTGAGAGTTCTCAGGAAGCTACAAGAAAGGCCCAAGACCAGACGGCAGAACGAGTGAAATGTCTGGAGGAAGATCTGGCAAGTACCAGGAGTGAGATCATATCGTTGCGGTCAGAGCGTGACAAGTTGGCTTTGGAAGCAAATTTTTCTCGAGAGAGACTTGAGAGCTTTATGAAAGAATTTGAGCATCAGAGAAATGAAACAAATGGTGTTTTAGCAAGAAACGTTGAGTTCTCTCAGTTGATAGTTGACTACCAACGAAAGCTGCATGAAAGTTCTGAATCCGTTCAAACTGCTGAGGAGCGTACTAGGAAGTTGACTATGGAGGTGTCTGTTTTGAAGCATGAAAAGGAAATGTTGGAACATGCTGAGAAGCGTGCTTGTGACGAAGTTCGTAGTTTGTCGGAAAGGGTCCATAGACTGCAGGCCAGCTTGGATACTATTCAGAGTGCCGAGGAAATTCGTGAGGAGGCAAGAGCTGCTGAGAGGAGAAGACAAGAAGAGTATACGAAACAAATAGAGAGGGAGTGGGCTGATGTCAAGAAAGATCTACAAGAAGAGCGAAACAATGCCCGTACTCTCACACTTGACCGTGAGCAGTCCGTACAAAATGCTATGAGACAAGTTGAAGAAATGGGAAAAGAGTTGGCTAATGCTTTGCATGCTGTTGCATCTGCTGAGACTAGAGCTGCTGTAGCCGAGGCTAAACTGACTGATCTGAACAAAAGGATTAAGTCCTCTGATGTTCAGGTCGTTGATGTCGATGGTGGGAGAGGATCTTCGTCCTTGACTAGTGACGAGGCTTTGGTGACATTGCGTGCTGCAAAGGAAGAGATTGAAAAGTTGAAAGAGGAAGTGCAAGCTAACAAGGATCACATGCTACAGTATAAGAGCATAGCTCAGGTAAACGAAGATGCATTGAGGCAGATGGAATCTGCCCATGAAGACTTCAAGATTGAGGCTGAAAAACTAAAGAAATCGCTTGAAGTCGAACTTATTTCTCTAAGAGAGAGAGTATCTGAACTTGAACACGAGTGTAGTTTGAATTCTCAAGAAGTTGCTTCAGCGGCTGCAGGAAAGGAAGAAGCTCTTTCTTCCACTCTATCAGAAATTACGAGTTTAAAGGAAGAAACCTTAACTAAAACTTCCCAAATTGTGTCACTGGAGATTCAGATATCTGCTTTGAAAGAAGACTTGGAGAAAGAACGTCATCGATCGCGTTCTGCTCAGGCCAATTATGAAAGACAGGTTATCCTCCAGTCGGAGACAATACAGGAGTTGACCAAGACATCGCAAGATTTGGCTATGCACCAGGAAAAAATGTCAGAGTTACGCAAATTGGCTGATGCACTCAAGGGCGAAAATAATGAACTCAAGTCTAAGTGGGAATTTGAGAAGGCAATATTAGAAGAATCAAAAAATGTTGCCGAGAAGAAGTACATTGAAATCAACGAACAGAACAAAATACTGCACAGTCAACTTGAGGCTTTGCACATTCAACTAACTGAAAGAGATCATGGTTCAGTTGGAACTTCTGCAAGCACTGGTCCAGATATTTCAGGTGATGCTGGTTTACAAAATGTGATAAGTTATCTTCGACGGACAAAAGAAATTGCGGAGACAGAGATTTCCTTATTGAAACAAGAAAAGCTTCGATTACAATCACAACTTGAGAGTGCTCTCAAGGCTTCAGAAACAGCCCAGTCATCACTTCATGCCGAGCGCACTAATTCAAGATCATTGTTCACTGAGGAGGAAATGAAATCCTTGCAACTACAGGTTAGAGAAATGAACTTACTTCGTGAAAGCAATATCCAACTCAGAGAAGAAAACAAGCACAATTTTGAGGAATGCCAGAAATTCCGTGAAATATCACAAAAAGCTAGAGCCGAGACTGAGAACCTAGAGAGATGGCTACAGGAGAGGCAGATTGAGTTGGAAGCCTGTAAGAAAGAAATTGAAATGCAAAAGACAGAGAAAGAACACTCAGAACAGAGGGTTCGTGAGTTACTTGAAAGGTATAGAAATATTGATGTTCAAGATTATGATCGCGCAAAGGATGATGTTTGTCAGTTGCAGAAAAAATTGGAGGAGAAGGATTCTGAAATACTAGAAGTCAAGAAACTTCTTTCAGAAAAGATGGAGACTGTATCATGTTTGGAGCGAGATATTGCTAACTGCAGATTGGAACTGACTGAGATGGAGAAGAGAATGAGTGATGCTTTGCAAGCTGAGGCAAGTCTAAAATCAGAAATCGAGAAGCATAGGAAGATGGCCACTCAGTATAAGAGGAGGCTCGAAATGTTCTCAAGAGAAAAAGAGACCGTTTCAAAAGAAAAGGAGACACTGTCCAAGGAAAAGGAGGAACTGAGCAAGGAGAATCAAGCTCTTTCTAGACAGCTGGAGGAAGTCAAATTAGTGAAACGAGCATCAGTAGATACTACCGGGGTGCAAGCAATTAGGGAAGAGAAAGACCAGAAAATTCAGCTTCTGGAAAAGCATTTGGAGAGGCAAAGAGAGGAGCTGAGAAAGGAGAAGGATGAAAATCGGATGGAGAAAGCAATGCGCAAGAAGATGGAGAAGGCTGTAACGGATTCCTATAATAATGTTGACCAGGACAAGTCGAACTTCATGAATGAACTCGAGAAGCATAAGCAGGCTCTGAAGCAGCTTTCAGATGAACTTGAAAAGCTGAAACAAGCAAAAGACAGTCTTCCTCAGGGTACCTCAATTGTTCAACTGCTTTCGGGAACCATACTGGATGGTCTTGCTGCTGCCTACGGTTTAGCTGTTGAAAATTTCGAAAAGACAGCACATTTAGTTCACAGTGAGTTTGGAGCTCACGGTGTTCTTGCAAACACTCCTCCAGTTGCAGATACTTCATTACCGGCTACCTCTGGTACTTTTTCCTGCAAGGGGCTTAGTATCCAAAGCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000075 GO:0000278 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005730 GO:0005737 GO:0005829 GO:0005911 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007049 GO:0007088 GO:0007093 GO:0007094 GO:0007275 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009536 GO:0009791 GO:0009892 GO:0009908 GO:0009909 GO:0009910 GO:0009987 GO:0010467 GO:0010468 GO:0010564 GO:0010605 GO:0010639 GO:0010948 GO:0010965 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016973 GO:0019222 GO:0022402 GO:0022414 GO:0030054 GO:0030071 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031503 GO:0031577 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0033233 GO:0033234 GO:0034613 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045786 GO:0045839 GO:0045841 GO:0045930 GO:0046907 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050793 GO:0050794 GO:0051028 GO:0051093 GO:0051128 GO:0051129 GO:0051168 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051234 GO:0051236 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051641 GO:0051649 GO:0051726 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0055044 GO:0060255 GO:0060968 GO:0061458 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071173 GO:0071174 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:0090567 GO:0099402 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902099 GO:1902100 GO:1903047 GO:1903320 GO:1903321 GO:1905818 GO:1905819 GO:2000026 GO:2000241 GO:2000242 GO:2000816 GO:2001251
KEGG Pathways
Metabolic & Signaling
ko03013 ko04144 ko05200 ko05216 map03013 map04144 map05200 map05216
Pfam Domains
Protein Families
TPR_MLP1_2

Protein Analysis

1149

Amino Acids

132.17

Weight (kDa)

5.37

Isoelectric Point (pI)

56.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 3074
Acc65I GGTACC 1 cut(s) 3230
AccB1I GGYRCC 1 cut(s) 3230
AccI GTMKAC 1 cut(s) 1013
AccII CGCG 2 cut(s) 1726, 2559
AciI CCGC 4 cut(s) 341, 616, 1574, 2123
AclI AACGTT 1 cut(s) 732
AclWI GGATC 2 cut(s) 1291, 1386
AcoI YGGCCR 1 cut(s) 2781
AcsI RAATTY 9 cut(s) 289, 649, 686, 966, 1552, 1895, 2366, 2988, 3304
AcuI CTGAAG 5 cut(s) 74, 381, 1554, 2181, 3191
AcyI GRCGYC 1 cut(s) 495
AfaI GTAC 8 cut(s) 410, 592, 814, 1084, 1113, 1946, 3232, 3409
AfiI CCNNNNNNNGG 4 cut(s) 37, 55, 1768, 3423
AhlI ACTAGT 2 cut(s) 205, 1298
AjnI CCWGG 3 cut(s) 593, 1818, 3120
AjuI GAANNNNNNNTTGG 2 cut(s) 1685, 1717
AloI GAACNNNNNNTCC 2 cut(s) 263, 295
Alw21I GWGCWC 2 cut(s) 2188, 3349
Alw26I GTCTC 9 cut(s) 658, 1120, 1181, 1766, 2120, 2393, 2645, 2822, 2843
AlwI GGATC 2 cut(s) 1291, 1386
AlwNI CAGNNNCTG 3 cut(s) 1577, 2998, 3169
Ama87I CYCGRG 2 cut(s) 657, 3149
AoxI GGCC 4 cut(s) 537, 933, 1737, 2781
ApoI RAATTY 9 cut(s) 289, 649, 686, 966, 1552, 1895, 2366, 2988, 3304
Asp700I GAANNNNTTC 3 cut(s) 387, 792, 2157
Asp718I GGTACC 1 cut(s) 3230
AspLEI GCGC 4 cut(s) 375, 2232, 2561, 3075
AspS9I GGNCC 3 cut(s) 538, 919, 2054
AsuC2I CCSGG 1 cut(s) 2953
AsuHPI GGTGA 3 cut(s) 52, 1327, 2081
AsuII TTCGAA 1 cut(s) 3309
AvaI CYCGRG 2 cut(s) 657, 3149
AvaII GGWCC 2 cut(s) 919, 2054
AxyI CCTNAGG 1 cut(s) 3225
BalI TGGCCA 1 cut(s) 2783
BanI GGYRCC 1 cut(s) 3230
BanII GRGCYC 1 cut(s) 3349
BauI CACGAG 1 cut(s) 1538
BbsI GAAGAC 4 cut(s) 1006, 1458, 1704, 3212
Bbv12I GWGCWC 2 cut(s) 2188, 3349
BbvCI CCTCAGC 2 cut(s) 804, 2739
BccI CCATC 9 cut(s) 1265, 1429, 2412, 2641, 2701, 2773, 3052, 3076, 3263
BceAI ACGGC 3 cut(s) 48, 110, 567
BciT130I CCWGG 3 cut(s) 595, 1820, 3122
BciVI GTATCC 2 cut(s) 937, 3443
BclI TGATCA 1 cut(s) 211
BcnI CCSGG 1 cut(s) 2953
BcoDI GTCTC 9 cut(s) 658, 1120, 1181, 1766, 2120, 2393, 2645, 2822, 2843
BcuI ACTAGT 2 cut(s) 205, 1298
BfmI CTRYAG 7 cut(s) 929, 1200, 1388, 1578, 2282, 2423, 2686
BfuI GTATCC 2 cut(s) 937, 3443
BglII AGATCT 2 cut(s) 580, 1054
Bme1390I CCNGG 4 cut(s) 595, 1820, 2953, 3122
Bme18I GGWCC 2 cut(s) 919, 2054
BmeT110I CYCGRG 2 cut(s) 657, 3149
BmgT120I GGNCC 3 cut(s) 538, 919, 2054
BmiI GGNNCC 4 cut(s) 233, 920, 3232, 3259
BmrFI CCNGG 4 cut(s) 595, 1820, 2953, 3122
BmrI ACTGGG 1 cut(s) 2203
BmsI GCATC 8 cut(s) 142, 703, 1187, 1411, 1843, 2062, 2716, 2945
BmuI ACTGGG 1 cut(s) 2203
BpiI GAAGAC 4 cut(s) 1006, 1458, 1704, 3212
BplI GAGNNNNNCTC 2 cut(s) 1390, 1422
BpmI CTGGAG 7 cut(s) 14, 459, 593, 1691, 1748, 2930, 3357
Bpu10I CCTNAGC 5 cut(s) 227, 804, 1407, 1734, 2739
Bpu14I TTCGAA 1 cut(s) 3309
BpuEI CTTGAG 8 cut(s) 689, 1542, 1844, 1865, 2009, 2174, 2198, 2800
BpuMI CCSGG 1 cut(s) 2953
Bsa29I ATCGAT 1 cut(s) 1720
BsaBI GATNNNNATC 3 cut(s) 2167, 2553, 3051
BsaHI GRCGYC 1 cut(s) 495
BsaI GGTCTC 1 cut(s) 2822
BsaJI CCNNGG 4 cut(s) 960, 1206, 2859, 2952
BsaXI ACNNNNNCTCC 2 cut(s) 2840, 2870
Bsc4I CCNNNNNNNGG 4 cut(s) 37, 55, 1768, 3423
Bse118I RCCGGY 1 cut(s) 3394
Bse1I ACTGG 7 cut(s) 496, 1674, 1765, 2056, 2209, 3270, 3374
Bse21I CCTNAGG 1 cut(s) 3225
Bse3DI GCAATG 3 cut(s) 411, 1319, 3075
Bse8I GATNNNNATC 3 cut(s) 2167, 2553, 3051
BseBI CCWGG 3 cut(s) 595, 1820, 3122
BseCI ATCGAT 1 cut(s) 1720
BseDI CCNNGG 4 cut(s) 960, 1206, 2859, 2952
BseGI GGATG 4 cut(s) 2572, 3052, 3063, 3274
BseJI GATNNNNATC 3 cut(s) 2167, 2553, 3051
BseLI CCNNNNNNNGG 4 cut(s) 37, 55, 1768, 3423
BseMI GCAATG 3 cut(s) 411, 1319, 3075
BseNI ACTGG 7 cut(s) 496, 1674, 1765, 2056, 2209, 3270, 3374
BseRI GAGGAG 9 cut(s) 443, 821, 989, 1009, 2273, 2612, 2812, 3041, 3360
BsgI GTGCAG 2 cut(s) 242, 1961
Bsh1236I CGCG 2 cut(s) 1726, 2559
Bsh1285I CGRYCG 1 cut(s) 1724
BshFI GGCC 4 cut(s) 539, 935, 1739, 2783
BshNI GGYRCC 1 cut(s) 3230
BshVI ATCGAT 1 cut(s) 1720
BsiEI CGRYCG 1 cut(s) 1724
BsiHKAI GWGCWC 2 cut(s) 2188, 3349
BsiHKCI CYCGRG 2 cut(s) 657, 3149
BsiSI CCGG 2 cut(s) 2952, 3395
BslFI GGGAC 1 cut(s) 97
BslI CCNNNNNNNGG 4 cut(s) 37, 55, 1768, 3423
BsmAI GTCTC 9 cut(s) 658, 1120, 1181, 1766, 2120, 2393, 2645, 2822, 2843
BsmFI GGGAC 1 cut(s) 97
BsmI GAATGC 2 cut(s) 65, 2363
BsnI GGCC 4 cut(s) 539, 935, 1739, 2783
Bso31I GGTCTC 1 cut(s) 2822
BsoBI CYCGRG 2 cut(s) 657, 3149
Bsp119I TTCGAA 1 cut(s) 3309
Bsp1286I GDGCHC 2 cut(s) 2188, 3349
Bsp1407I TGTACA 1 cut(s) 408
BspACI CCGC 4 cut(s) 341, 616, 1574, 2123
BspANI GGCC 4 cut(s) 539, 935, 1739, 2783
BspDI ATCGAT 1 cut(s) 1720
BspFNI CGCG 2 cut(s) 1726, 2559
BspHI TCATGA 3 cut(s) 97, 106, 3138
BspLI GGNNCC 4 cut(s) 233, 920, 3232, 3259
BspMAI CTGCAG 3 cut(s) 933, 1582, 2690
BspPI GGATC 2 cut(s) 1291, 1386
BspQI GCTCTTC 1 cut(s) 1059
BspT104I TTCGAA 1 cut(s) 3309
BspT107I GGYRCC 1 cut(s) 3230
BspTNI GGTCTC 1 cut(s) 2822
BsrDI GCAATG 3 cut(s) 411, 1319, 3075
BsrFI RCCGGY 1 cut(s) 3394
BsrGI TGTACA 1 cut(s) 408
BsrI ACTGG 7 cut(s) 496, 1674, 1765, 2056, 2209, 3270, 3374
BssAI RCCGGY 1 cut(s) 3394
BssECI CCNNGG 4 cut(s) 960, 1206, 2859, 2952
BssNAI GTATAC 1 cut(s) 1014
BssNI GRCGYC 1 cut(s) 495
BssSI CACGAG 1 cut(s) 1538
BssT1I CCWWGG 1 cut(s) 2859
Bst1107I GTATAC 1 cut(s) 1014
Bst2BI CACGAG 1 cut(s) 1538
Bst2UI CCWGG 3 cut(s) 595, 1820, 3122
Bst6I CTCTTC 7 cut(s) 420, 459, 1002, 1059, 1332, 2708, 2967
BstACI GRCGYC 1 cut(s) 495
BstAPI GCANNNNNTGC 1 cut(s) 986
BstAUI TGTACA 1 cut(s) 408
BstBI TTCGAA 1 cut(s) 3309
BstENI CCTNNNNNAGG 1 cut(s) 53
BstF5I GGATG 4 cut(s) 2572, 3052, 3063, 3274
BstFNI CGCG 2 cut(s) 1726, 2559
BstHHI GCGC 4 cut(s) 375, 2232, 2561, 3075
BstMAI GTCTC 9 cut(s) 658, 1120, 1181, 1766, 2120, 2393, 2645, 2822, 2843
BstMCI CGRYCG 1 cut(s) 1724
BstMWI GCNNNNNNNGC 8 cut(s) 622, 644, 986, 1169, 1202, 1574, 2192, 2735
BstNI CCWGG 3 cut(s) 595, 1820, 3122
BstNSI RCATGY 3 cut(s) 875, 1172, 1387
BstSCI CCNGG 4 cut(s) 593, 1818, 2951, 3120
BstSFI CTRYAG 7 cut(s) 929, 1200, 1388, 1578, 2282, 2423, 2686
BstUI CGCG 2 cut(s) 1726, 2559
BstV2I GAAGAC 4 cut(s) 1006, 1458, 1704, 3212
BstX2I RGATCY 3 cut(s) 580, 1054, 1283
BstYI RGATCY 3 cut(s) 580, 1054, 1283
BstZ17I GTATAC 1 cut(s) 1014
Bsu15I ATCGAT 1 cut(s) 1720
Bsu36I CCTNAGG 1 cut(s) 3225
BsuI GTATCC 2 cut(s) 937, 3443
BsuRI GGCC 4 cut(s) 539, 935, 1739, 2783
BsuTUI ATCGAT 1 cut(s) 1720
BtgZI GCGATG 1 cut(s) 1782
BtsCI GGATG 4 cut(s) 2572, 3052, 3063, 3274
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 8 cut(s) 141, 315, 351, 1667, 2049, 2253, 2852, 3340
CaiI CAGNNNCTG 3 cut(s) 1577, 2998, 3169
CciI TCATGA 3 cut(s) 97, 106, 3138
CfoI GCGC 4 cut(s) 375, 2232, 2561, 3075
Cfr10I RCCGGY 1 cut(s) 3394
Cfr13I GGNCC 3 cut(s) 538, 919, 2054
ClaI ATCGAT 1 cut(s) 1720
CseI GACGC 1 cut(s) 484
Csp6I GTAC 8 cut(s) 409, 591, 813, 1083, 1112, 1945, 3231, 3408
CviQI GTAC 8 cut(s) 409, 591, 813, 1083, 1112, 1945, 3231, 3408
DraI TTTAAA 1 cut(s) 1629
EaeI YGGCCR 1 cut(s) 2781
Eam1104I CTCTTC 7 cut(s) 420, 459, 1002, 1059, 1332, 2708, 2967
EarI CTCTTC 7 cut(s) 420, 459, 1002, 1059, 1332, 2708, 2967
Ecl136II GAGCTC 1 cut(s) 3347
Eco130I CCWWGG 1 cut(s) 2859
Eco24I GRGCYC 1 cut(s) 3349
Eco31I GGTCTC 1 cut(s) 2822
Eco32I GATATC 2 cut(s) 168, 1683
Eco47I GGWCC 2 cut(s) 919, 2054
Eco53kI GAGCTC 1 cut(s) 3347
Eco57I CTGAAG 5 cut(s) 74, 381, 1554, 2181, 3191
Eco81I CCTNAGG 1 cut(s) 3225
Eco88I CYCGRG 2 cut(s) 657, 3149
EcoICRI GAGCTC 1 cut(s) 3347
EcoNI CCTNNNNNAGG 1 cut(s) 53
EcoRI GAATTC 1 cut(s) 1552
EcoRII CCWGG 3 cut(s) 593, 1818, 3120
EcoRV GATATC 2 cut(s) 168, 1683
EcoT14I CCWWGG 1 cut(s) 2859
EcoT22I ATGCAT 1 cut(s) 1426
EcoT38I GRGCYC 1 cut(s) 3349
ErhI CCWWGG 1 cut(s) 2859
FaqI GGGAC 1 cut(s) 97
FbaI TGATCA 1 cut(s) 211
FblI GTMKAC 1 cut(s) 1013
FokI GGATG 4 cut(s) 2579, 3059, 3070, 3281
FriOI GRGCYC 1 cut(s) 3349
FspI TGCGCA 1 cut(s) 3074
GlaI GCGC 4 cut(s) 374, 2231, 2560, 3074
GsuI CTGGAG 7 cut(s) 14, 459, 593, 1691, 1748, 2930, 3357
HaeIII GGCC 4 cut(s) 539, 935, 1739, 2783
HapII CCGG 2 cut(s) 2952, 3395
HgaI GACGC 1 cut(s) 484
HhaI GCGC 4 cut(s) 375, 2232, 2561, 3075
Hin1I GRCGYC 1 cut(s) 495
Hin6I GCGC 4 cut(s) 373, 2230, 2559, 3073
HinP1I GCGC 4 cut(s) 373, 2230, 2559, 3073
HincII GTYRAC 6 cut(s) 183, 757, 825, 1788, 1985, 3118
HindII GTYRAC 6 cut(s) 183, 757, 825, 1788, 1985, 3118
HindIII AAGCTT 2 cut(s) 500, 2156
HpaII CCGG 2 cut(s) 2952, 3395
HphI GGTGA 3 cut(s) 52, 1327, 2081
Hpy99I CGWCG 1 cut(s) 2109
HpyAV CCTTC 8 cut(s) 49, 59, 196, 398, 1897, 2596, 3037, 3082
HpyCH4IV ACGT 2 cut(s) 732, 1714
HpyF10VI GCNNNNNNNGC 8 cut(s) 622, 644, 986, 1169, 1202, 1574, 2192, 2735
HpySE526I ACGT 2 cut(s) 732, 1714
Hsp92I GRCGYC 1 cut(s) 495
HspAI GCGC 4 cut(s) 373, 2230, 2559, 3073
KpnI GGTACC 1 cut(s) 3234
Ksp22I TGATCA 1 cut(s) 211
LguI GCTCTTC 1 cut(s) 1059
LmnI GCTCC 7 cut(s) 231, 430, 478, 808, 2668, 3028, 3344
LweI GCATC 8 cut(s) 142, 703, 1187, 1411, 1843, 2062, 2716, 2945
MaeII ACGT 2 cut(s) 732, 1714
MfeI CAATTG 1 cut(s) 3237
MflI RGATCY 3 cut(s) 580, 1054, 1283
MhlI GDGCHC 2 cut(s) 2188, 3349
MlsI TGGCCA 1 cut(s) 2783
MluNI TGGCCA 1 cut(s) 2783
MmeI TCCRAC 6 cut(s) 846, 891, 1749, 2014, 2347, 2424
Mox20I TGGCCA 1 cut(s) 2783
Mph1103I ATGCAT 1 cut(s) 1426
MroXI GAANNNNTTC 3 cut(s) 387, 792, 2157
MscI TGGCCA 1 cut(s) 2783
MseI TTAA 3 cut(s) 1239, 1628, 1643
MslI CAYNNNNRTG 2 cut(s) 111, 318
Msp20I TGGCCA 1 cut(s) 2783
MspA1I CMGCKG 2 cut(s) 1574, 2908
MspI CCGG 2 cut(s) 2952, 3395
MspR9I CCNGG 4 cut(s) 595, 1820, 2953, 3122
MunI CAATTG 1 cut(s) 3237
Mva1269I GAATGC 2 cut(s) 65, 2363
MvaI CCWGG 3 cut(s) 595, 1820, 3122
MvnI CGCG 2 cut(s) 1726, 2559
MwoI GCNNNNNNNGC 8 cut(s) 622, 644, 986, 1169, 1202, 1574, 2192, 2735
NciI CCSGG 1 cut(s) 2953
NlaIV GGNNCC 4 cut(s) 233, 920, 3232, 3259
NmeAIII GCCGAG 6 cut(s) 181, 985, 1231, 1960, 2251, 2422
NmuCI GTSAC 6 cut(s) 40, 626, 890, 1301, 1315, 1665
NsbI TGCGCA 1 cut(s) 3074
NsiI ATGCAT 1 cut(s) 1426
NspI RCATGY 3 cut(s) 875, 1172, 1387
NspV TTCGAA 1 cut(s) 3309
PaeI GCATGC 1 cut(s) 1172
PaeR7I CTCGAG 2 cut(s) 657, 3149
PagI TCATGA 3 cut(s) 97, 106, 3138
PciSI GCTCTTC 1 cut(s) 1059
PcsI WCGNNNNNNNCGW 1 cut(s) 1266
PctI GAATGC 2 cut(s) 65, 2363
PdmI GAANNNNTTC 3 cut(s) 387, 792, 2157
PflFI GACNNNGTC 1 cut(s) 2854
Ple19I CGATCG 1 cut(s) 1724
Psp124BI GAGCTC 1 cut(s) 3349
Psp1406I AACGTT 1 cut(s) 732
Psp6I CCWGG 3 cut(s) 593, 1818, 3120
PspGI CCWGG 3 cut(s) 593, 1818, 3120
PspN4I GGNNCC 4 cut(s) 233, 920, 3232, 3259
PspPI GGNCC 3 cut(s) 538, 919, 2054
PstI CTGCAG 3 cut(s) 933, 1582, 2690
PstNI CAGNNNCTG 3 cut(s) 1577, 2998, 3169
PsuI RGATCY 3 cut(s) 580, 1054, 1283
PsyI GACNNNGTC 1 cut(s) 2854
PvuI CGATCG 1 cut(s) 1724
PvuII CAGCTG 1 cut(s) 2908
RsaI GTAC 8 cut(s) 410, 592, 814, 1084, 1113, 1946, 3232, 3409
RsaNI GTAC 8 cut(s) 409, 591, 813, 1083, 1112, 1945, 3231, 3408
RseI CAYNNNNRTG 2 cut(s) 111, 318
SacI GAGCTC 1 cut(s) 3349
SapI GCTCTTC 1 cut(s) 1059
SaqAI TTAA 3 cut(s) 1239, 1628, 1643
Sau96I GGNCC 3 cut(s) 538, 919, 2054
ScrFI CCNGG 4 cut(s) 595, 1820, 2953, 3122
SduI GDGCHC 2 cut(s) 2188, 3349
SfaNI GCATC 8 cut(s) 142, 703, 1187, 1411, 1843, 2062, 2716, 2945
SfcI CTRYAG 7 cut(s) 929, 1200, 1388, 1578, 2282, 2423, 2686
Sfr274I CTCGAG 2 cut(s) 657, 3149
SfuI TTCGAA 1 cut(s) 3309
SinI GGWCC 2 cut(s) 919, 2054
SlaI CTCGAG 2 cut(s) 657, 3149
SmiMI CAYNNNNRTG 2 cut(s) 111, 318
SpeI ACTAGT 2 cut(s) 205, 1298
SphI GCATGC 1 cut(s) 1172
SsiI CCGC 4 cut(s) 341, 616, 1574, 2123
SspI AATATT 2 cut(s) 1911, 2536
SstI GAGCTC 1 cut(s) 3349
StyD4I CCNGG 4 cut(s) 593, 1818, 2951, 3120
StyI CCWWGG 1 cut(s) 2859
TaiI ACGT 2 cut(s) 735, 1717
TatI WGTACW 2 cut(s) 408, 1944
TauI GCSGC 2 cut(s) 344, 1577
Tru1I TTAA 3 cut(s) 1239, 1628, 1643
Tru9I TTAA 3 cut(s) 1239, 1628, 1643
TscAI CASTG 8 cut(s) 148, 322, 351, 1674, 2056, 2260, 2859, 3340
TseFI GTSAC 6 cut(s) 40, 626, 890, 1301, 1315, 1665
Tsp45I GTSAC 6 cut(s) 40, 626, 890, 1301, 1315, 1665
TspGWI ACGGA 5 cut(s) 781, 1099, 2122, 2360, 3113
TspRI CASTG 8 cut(s) 148, 322, 351, 1674, 2056, 2260, 2859, 3340
Tth111I GACNNNGTC 1 cut(s) 2854
VpaK11BI GGWCC 2 cut(s) 919, 2054
XagI CCTNNNNNAGG 1 cut(s) 53
XapI RAATTY 9 cut(s) 289, 649, 686, 966, 1552, 1895, 2366, 2988, 3304
XbaI TCTAGA 2 cut(s) 332, 2900
XceI RCATGY 3 cut(s) 875, 1172, 1387
XhoI CTCGAG 2 cut(s) 657, 3149
XmiI GTMKAC 1 cut(s) 1013
XmnI GAANNNNTTC 3 cut(s) 387, 792, 2157
Zsp2I ATGCAT 1 cut(s) 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.