At4g04980-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11070 AT1G11070 AT1G11070 AT1G11070 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT4G04980 AT4G04980 AT4G04980 |
| malus_domestica | MD05G1320300.v1.1 MD05G1320400.v1.1 MD05G1320600.v1.1 MD05G1320700.v1.1 MD05G1320900.v1.1 MD10G1299500.v1.1 |
| prunus_persica | Prupe.4G041300_v2.0.a1 Prupe.4G041300_v2.0.a1 |
| pyrus_communis | pycom05g29550 pycom05g29570 |
| rosa_chinensis | RchiOBHm_Chr5g0007591 RchiOBHm_Chr5g0007601 RchiOBHm_Chr5g0021911 RchiOBHm_Chr7g0235111 |
| rosa_laevigata | RLG00000013181 RLG00000031475 |
| rosa_multiflora | Rmu_sc0015365.1_g000002 Rmu_sc0042291.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00068760 Rroxscaffold_1G00068770 Rroxscaffold_4G00304220 |
| rosa_rugosa | Rorug04G0429100 |
| rosa_samantha | Rh4DG240000 Rh5AG057100 Rh5AG057200 Rh5BG054200 Rh5CG064000 Rh5CG064100 Rh5DG053300 Rh6BG518400 Rh6CG523900 |
| rosa_wichuraiana | Rw5G005350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 548 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1876 |
| Acc36I | ACCTGC | 1 cut(s) | 548 |
| AccB1I | GGYRCC | 1 cut(s) | 1255 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 779, 1484 |
| AccI | GTMKAC | 1 cut(s) | 1760 |
| AccII | CGCG | 1 cut(s) | 2069 |
| AccIII | TCCGGA | 2 cut(s) | 180, 2145 |
| AciI | CCGC | 9 cut(s) | 1004, 1010, 1127, 1130, 1181, 1401, 1653, 1674, 2393 |
| AclWI | GGATC | 8 cut(s) | 453, 1270, 1357, 1396, 1438, 1521, 1621, 2156 |
| AcsI | RAATTY | 3 cut(s) | 338, 757, 1114 |
| AcuI | CTGAAG | 2 cut(s) | 184, 1577 |
| AfaI | GTAC | 1 cut(s) | 2236 |
| AhlI | ACTAGT | 1 cut(s) | 1996 |
| AjnI | CCWGG | 6 cut(s) | 255, 1258, 1309, 1345, 1384, 1426 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 762, 794 |
| AleI | CACNNNNGTG | 1 cut(s) | 953 |
| Alw21I | GWGCWC | 4 cut(s) | 180, 601, 724, 1366 |
| Alw26I | GTCTC | 3 cut(s) | 377, 702, 1586 |
| AlwI | GGATC | 8 cut(s) | 453, 1270, 1357, 1396, 1438, 1521, 1621, 2156 |
| Ama87I | CYCGRG | 1 cut(s) | 575 |
| Aor13HI | TCCGGA | 2 cut(s) | 180, 2145 |
| AoxI | GGCC | 5 cut(s) | 258, 609, 1226, 1402, 1474 |
| ApoI | RAATTY | 3 cut(s) | 338, 757, 1114 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 122, 154, 1564, 1596 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1854 |
| AspLEI | GCGC | 3 cut(s) | 1000, 1030, 1520 |
| AspS9I | GGNCC | 6 cut(s) | 23, 253, 1226, 1403, 1445, 1475 |
| AsuC2I | CCSGG | 1 cut(s) | 161 |
| AsuHPI | GGTGA | 3 cut(s) | 239, 621, 1230 |
| AvaI | CYCGRG | 1 cut(s) | 575 |
| AvaII | GGWCC | 3 cut(s) | 23, 253, 1445 |
| AxyI | CCTNAGG | 1 cut(s) | 529 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1298, 1331 |
| BanI | GGYRCC | 1 cut(s) | 1255 |
| BanII | GRGCYC | 4 cut(s) | 81, 180, 724, 1366 |
| BbsI | GAAGAC | 2 cut(s) | 80, 132 |
| Bbv12I | GWGCWC | 4 cut(s) | 180, 601, 724, 1366 |
| BciT130I | CCWGG | 6 cut(s) | 257, 1260, 1311, 1347, 1386, 1428 |
| BclI | TGATCA | 1 cut(s) | 2251 |
| BcnI | CCSGG | 1 cut(s) | 161 |
| BcoDI | GTCTC | 3 cut(s) | 377, 702, 1586 |
| BcuI | ACTAGT | 1 cut(s) | 1996 |
| BfaI | CTAG | 8 cut(s) | 72, 114, 594, 732, 870, 1617, 1700, 1997 |
| BfmI | CTRYAG | 2 cut(s) | 1982, 2223 |
| BfoI | RGCGCY | 1 cut(s) | 1001 |
| BfuAI | ACCTGC | 1 cut(s) | 548 |
| BmcAI | AGTACT | 1 cut(s) | 2236 |
| Bme1390I | CCNGG | 7 cut(s) | 161, 257, 1260, 1311, 1347, 1386, 1428 |
| Bme18I | GGWCC | 3 cut(s) | 23, 253, 1445 |
| BmeT110I | CYCGRG | 1 cut(s) | 575 |
| BmgT120I | GGNCC | 6 cut(s) | 23, 253, 1226, 1403, 1445, 1475 |
| BmiI | GGNNCC | 9 cut(s) | 78, 535, 622, 771, 1227, 1257, 1329, 1907, 2004 |
| BmrFI | CCNGG | 7 cut(s) | 161, 257, 1260, 1311, 1347, 1386, 1428 |
| BmsI | GCATC | 4 cut(s) | 220, 1643, 1684, 1818 |
| BpiI | GAAGAC | 2 cut(s) | 80, 132 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 787, 819 |
| BpuEI | CTTGAG | 4 cut(s) | 335, 526, 1580, 2161 |
| BpuMI | CCSGG | 1 cut(s) | 161 |
| BsaJI | CCNNGG | 4 cut(s) | 81, 479, 1310, 2160 |
| BsaWI | WCCGGW | 3 cut(s) | 180, 550, 2145 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 605, 635, 1066, 1096 |
| Bse1I | ACTGG | 1 cut(s) | 2242 |
| Bse21I | CCTNAGG | 1 cut(s) | 529 |
| Bse3DI | GCAATG | 4 cut(s) | 66, 632, 742, 959 |
| BseAI | TCCGGA | 2 cut(s) | 180, 2145 |
| BseBI | CCWGG | 6 cut(s) | 257, 1260, 1311, 1347, 1386, 1428 |
| BseDI | CCNNGG | 4 cut(s) | 81, 479, 1310, 2160 |
| BseMI | GCAATG | 4 cut(s) | 66, 632, 742, 959 |
| BseMII | CTCAG | 3 cut(s) | 165, 360, 543 |
| BseNI | ACTGG | 1 cut(s) | 2242 |
| BseRI | GAGGAG | 2 cut(s) | 1167, 1368 |
| BsgI | GTGCAG | 3 cut(s) | 508, 1494, 1934 |
| Bsh1236I | CGCG | 1 cut(s) | 2069 |
| BshFI | GGCC | 5 cut(s) | 260, 611, 1228, 1404, 1476 |
| BshNI | GGYRCC | 1 cut(s) | 1255 |
| BsiHKAI | GWGCWC | 4 cut(s) | 180, 601, 724, 1366 |
| BsiHKCI | CYCGRG | 1 cut(s) | 575 |
| BsiSI | CCGG | 4 cut(s) | 160, 181, 551, 2146 |
| BslFI | GGGAC | 3 cut(s) | 218, 440, 796 |
| BsmAI | GTCTC | 3 cut(s) | 377, 702, 1586 |
| BsmBI | CGTCTC | 1 cut(s) | 377 |
| BsmFI | GGGAC | 3 cut(s) | 218, 440, 796 |
| BsmI | GAATGC | 1 cut(s) | 112 |
| BsnI | GGCC | 5 cut(s) | 260, 611, 1228, 1404, 1476 |
| BsoBI | CYCGRG | 1 cut(s) | 575 |
| Bsp1286I | GDGCHC | 5 cut(s) | 81, 180, 601, 724, 1366 |
| Bsp13I | TCCGGA | 2 cut(s) | 180, 2145 |
| Bsp19I | CCATGG | 1 cut(s) | 2160 |
| BspACI | CCGC | 9 cut(s) | 1004, 1010, 1127, 1130, 1181, 1401, 1653, 1674, 2393 |
| BspANI | GGCC | 5 cut(s) | 260, 611, 1228, 1404, 1476 |
| BspCNI | CTCAG | 3 cut(s) | 166, 361, 542 |
| BspEI | TCCGGA | 2 cut(s) | 180, 2145 |
| BspFNI | CGCG | 1 cut(s) | 2069 |
| BspLI | GGNNCC | 9 cut(s) | 78, 535, 622, 771, 1227, 1257, 1329, 1907, 2004 |
| BspMAI | CTGCAG | 2 cut(s) | 1986, 2227 |
| BspMI | ACCTGC | 1 cut(s) | 548 |
| BspPI | GGATC | 8 cut(s) | 453, 1270, 1357, 1396, 1438, 1521, 1621, 2156 |
| BspT107I | GGYRCC | 1 cut(s) | 1255 |
| BsrDI | GCAATG | 4 cut(s) | 66, 632, 742, 959 |
| BsrI | ACTGG | 1 cut(s) | 2242 |
| BssECI | CCNNGG | 4 cut(s) | 81, 479, 1310, 2160 |
| BssNAI | GTATAC | 1 cut(s) | 1761 |
| BssT1I | CCWWGG | 2 cut(s) | 81, 2160 |
| Bst1107I | GTATAC | 1 cut(s) | 1761 |
| Bst2UI | CCWGG | 6 cut(s) | 257, 1260, 1311, 1347, 1386, 1428 |
| Bst4CI | ACNGT | 2 cut(s) | 388, 1092 |
| Bst6I | CTCTTC | 4 cut(s) | 705, 1553, 1737, 2225 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2222 |
| BstC8I | GCNNGC | 3 cut(s) | 41, 125, 657 |
| BstDEI | CTNAG | 5 cut(s) | 174, 369, 529, 851, 1793 |
| BstDSI | CCRYGG | 1 cut(s) | 2160 |
| BstENI | CCTNNNNNAGG | 5 cut(s) | 1344, 1383, 1425, 1595, 2024 |
| BstFNI | CGCG | 1 cut(s) | 2069 |
| BstH2I | RGCGCY | 1 cut(s) | 1001 |
| BstHHI | GCGC | 3 cut(s) | 1000, 1030, 1520 |
| BstMAI | GTCTC | 3 cut(s) | 377, 702, 1586 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 230, 239, 531, 540, 1517, 1671, 2222 |
| BstNI | CCWGG | 6 cut(s) | 257, 1260, 1311, 1347, 1386, 1428 |
| BstNSI | RCATGY | 2 cut(s) | 127, 2356 |
| BstSCI | CCNGG | 7 cut(s) | 159, 255, 1258, 1309, 1345, 1384, 1426 |
| BstSFI | CTRYAG | 2 cut(s) | 1982, 2223 |
| BstUI | CGCG | 1 cut(s) | 2069 |
| BstV2I | GAAGAC | 2 cut(s) | 80, 132 |
| BstX2I | RGATCY | 2 cut(s) | 1526, 1613 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 639 |
| BstYI | RGATCY | 2 cut(s) | 1526, 1613 |
| BstZ17I | GTATAC | 1 cut(s) | 1761 |
| Bsu36I | CCTNAGG | 1 cut(s) | 529 |
| BsuRI | GGCC | 5 cut(s) | 260, 611, 1228, 1404, 1476 |
| BtgI | CCRYGG | 1 cut(s) | 2160 |
| BtgZI | GCGATG | 1 cut(s) | 2084 |
| BtsI | GCAGTG | 2 cut(s) | 1040, 1946 |
| BtsIMutI | CAGTG | 5 cut(s) | 1040, 1272, 1946, 1974, 2401 |
| BveI | ACCTGC | 1 cut(s) | 548 |
| Cac8I | GCNNGC | 3 cut(s) | 41, 125, 657 |
| CfoI | GCGC | 3 cut(s) | 1000, 1030, 1520 |
| Cfr13I | GGNCC | 6 cut(s) | 23, 253, 1226, 1403, 1445, 1475 |
| CseI | GACGC | 1 cut(s) | 2075 |
| Csp6I | GTAC | 1 cut(s) | 2235 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1305, 1340 |
| CviAII | CATG | 9 cut(s) | 124, 423, 725, 1465, 1816, 2161, 2185, 2336, 2353 |
| CviQI | GTAC | 1 cut(s) | 2235 |
| DdeI | CTNAG | 5 cut(s) | 174, 369, 529, 851, 1793 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1876 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1876 |
| Eam1104I | CTCTTC | 4 cut(s) | 705, 1553, 1737, 2225 |
| EarI | CTCTTC | 4 cut(s) | 705, 1553, 1737, 2225 |
| EciI | GGCGGA | 5 cut(s) | 993, 999, 1170, 1668, 1689 |
| Ecl136II | GAGCTC | 3 cut(s) | 178, 722, 1364 |
| Eco130I | CCWWGG | 2 cut(s) | 81, 2160 |
| Eco24I | GRGCYC | 4 cut(s) | 81, 180, 724, 1366 |
| Eco47I | GGWCC | 3 cut(s) | 23, 253, 1445 |
| Eco53kI | GAGCTC | 3 cut(s) | 178, 722, 1364 |
| Eco57I | CTGAAG | 2 cut(s) | 184, 1577 |
| Eco81I | CCTNAGG | 1 cut(s) | 529 |
| Eco88I | CYCGRG | 1 cut(s) | 575 |
| EcoICRI | GAGCTC | 3 cut(s) | 178, 722, 1364 |
| EcoNI | CCTNNNNNAGG | 5 cut(s) | 1344, 1383, 1425, 1595, 2024 |
| EcoO109I | RGGNCCY | 2 cut(s) | 253, 1445 |
| EcoRI | GAATTC | 1 cut(s) | 338 |
| EcoRII | CCWGG | 6 cut(s) | 255, 1258, 1309, 1345, 1384, 1426 |
| EcoT14I | CCWWGG | 2 cut(s) | 81, 2160 |
| EcoT38I | GRGCYC | 4 cut(s) | 81, 180, 724, 1366 |
| ErhI | CCWWGG | 2 cut(s) | 81, 2160 |
| Esp3I | CGTCTC | 1 cut(s) | 377 |
| FaeI | CATG | 9 cut(s) | 127, 426, 728, 1468, 1819, 2164, 2188, 2339, 2356 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 179, 211 |
| FaqI | GGGAC | 3 cut(s) | 218, 440, 796 |
| FatI | CATG | 9 cut(s) | 123, 422, 724, 1464, 1815, 2160, 2184, 2335, 2352 |
| FbaI | TGATCA | 1 cut(s) | 2251 |
| FblI | GTMKAC | 1 cut(s) | 1760 |
| FriOI | GRGCYC | 4 cut(s) | 81, 180, 724, 1366 |
| FspBI | CTAG | 8 cut(s) | 72, 114, 594, 732, 870, 1617, 1700, 1997 |
| GlaI | GCGC | 3 cut(s) | 999, 1029, 1519 |
| HaeII | RGCGCY | 1 cut(s) | 1001 |
| HaeIII | GGCC | 5 cut(s) | 260, 611, 1228, 1404, 1476 |
| HapII | CCGG | 4 cut(s) | 160, 181, 551, 2146 |
| HgaI | GACGC | 1 cut(s) | 2075 |
| HhaI | GCGC | 3 cut(s) | 1000, 1030, 1520 |
| Hin1II | CATG | 9 cut(s) | 127, 426, 728, 1468, 1819, 2164, 2188, 2339, 2356 |
| Hin6I | GCGC | 3 cut(s) | 998, 1028, 1518 |
| HinP1I | GCGC | 3 cut(s) | 998, 1028, 1518 |
| HincII | GTYRAC | 1 cut(s) | 1317 |
| HindII | GTYRAC | 1 cut(s) | 1317 |
| HinfI | GANTC | 9 cut(s) | 68, 149, 293, 512, 673, 1579, 1850, 1877, 2384 |
| HpaII | CCGG | 4 cut(s) | 160, 181, 551, 2146 |
| HphI | GGTGA | 3 cut(s) | 239, 621, 1230 |
| Hpy166II | GTNNAC | 3 cut(s) | 1317, 1761, 2333 |
| Hpy188I | TCNGA | 9 cut(s) | 11, 145, 168, 370, 483, 517, 2109, 2256, 2389 |
| Hpy188III | TCNNGA | 9 cut(s) | 48, 181, 449, 496, 505, 575, 594, 1859, 2146 |
| Hpy8I | GTNNAC | 3 cut(s) | 1317, 1761, 2333 |
| Hpy99I | CGWCG | 2 cut(s) | 39, 2093 |
| HpyAV | CCTTC | 9 cut(s) | 54, 274, 555, 581, 601, 979, 1601, 1604, 1895 |
| HpyCH4III | ACNGT | 2 cut(s) | 388, 1092 |
| HpyCH4IV | ACGT | 1 cut(s) | 2321 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 230, 239, 531, 540, 1517, 1671, 2222 |
| HpyF3I | CTNAG | 5 cut(s) | 174, 369, 529, 851, 1793 |
| HpySE526I | ACGT | 1 cut(s) | 2321 |
| Hsp92II | CATG | 9 cut(s) | 127, 426, 728, 1468, 1819, 2164, 2188, 2339, 2356 |
| HspAI | GCGC | 3 cut(s) | 998, 1028, 1518 |
| Kpn2I | TCCGGA | 2 cut(s) | 180, 2145 |
| Ksp22I | TGATCA | 1 cut(s) | 2251 |
| LweI | GCATC | 4 cut(s) | 220, 1643, 1684, 1818 |
| MaeI | CTAG | 8 cut(s) | 72, 114, 594, 732, 870, 1617, 1700, 1997 |
| MaeII | ACGT | 1 cut(s) | 2321 |
| MaeIII | GTNAC | 3 cut(s) | 553, 1273, 1878 |
| MfeI | CAATTG | 2 cut(s) | 777, 1395 |
| MflI | RGATCY | 2 cut(s) | 1526, 1613 |
| MhlI | GDGCHC | 5 cut(s) | 81, 180, 601, 724, 1366 |
| MlyI | GAGTC | 5 cut(s) | 62, 302, 1588, 1886, 2393 |
| MmeI | TCCRAC | 5 cut(s) | 300, 938, 1639, 1662, 1902 |
| MroI | TCCGGA | 2 cut(s) | 180, 2145 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1854 |
| MseI | TTAA | 7 cut(s) | 54, 687, 1196, 1469, 1752, 1961, 2277 |
| MslI | CAYNNNNRTG | 3 cut(s) | 953, 1778, 2189 |
| MspA1I | CMGCKG | 1 cut(s) | 224 |
| MspI | CCGG | 4 cut(s) | 160, 181, 551, 2146 |
| MspR9I | CCNGG | 7 cut(s) | 161, 257, 1260, 1311, 1347, 1386, 1428 |
| MunI | CAATTG | 2 cut(s) | 777, 1395 |
| Mva1269I | GAATGC | 1 cut(s) | 112 |
| MvaI | CCWGG | 6 cut(s) | 257, 1260, 1311, 1347, 1386, 1428 |
| MvnI | CGCG | 1 cut(s) | 2069 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 230, 239, 531, 540, 1517, 1671, 2222 |
| NciI | CCSGG | 1 cut(s) | 161 |
| NcoI | CCATGG | 1 cut(s) | 2160 |
| NlaIII | CATG | 9 cut(s) | 127, 426, 728, 1468, 1819, 2164, 2188, 2339, 2356 |
| NlaIV | GGNNCC | 9 cut(s) | 78, 535, 622, 771, 1227, 1257, 1329, 1907, 2004 |
| NmeAIII | GCCGAG | 1 cut(s) | 1494 |
| NmuCI | GTSAC | 2 cut(s) | 553, 1878 |
| NspI | RCATGY | 2 cut(s) | 127, 2356 |
| OliI | CACNNNNGTG | 1 cut(s) | 953 |
| PaeI | GCATGC | 1 cut(s) | 127 |
| PaqCI | CACCTGC | 1 cut(s) | 548 |
| PctI | GAATGC | 1 cut(s) | 112 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1854 |
| PfeI | GAWTC | 4 cut(s) | 149, 512, 673, 1850 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 779, 1484 |
| PleI | GAGTC | 5 cut(s) | 62, 301, 1587, 1885, 2392 |
| PpsI | GAGTC | 5 cut(s) | 62, 301, 1587, 1885, 2392 |
| PpuMI | RGGWCCY | 2 cut(s) | 253, 1445 |
| Psp124BI | GAGCTC | 3 cut(s) | 180, 724, 1366 |
| Psp5II | RGGWCCY | 2 cut(s) | 253, 1445 |
| Psp6I | CCWGG | 6 cut(s) | 255, 1258, 1309, 1345, 1384, 1426 |
| PspGI | CCWGG | 6 cut(s) | 255, 1258, 1309, 1345, 1384, 1426 |
| PspN4I | GGNNCC | 9 cut(s) | 78, 535, 622, 771, 1227, 1257, 1329, 1907, 2004 |
| PspPI | GGNCC | 6 cut(s) | 23, 253, 1226, 1403, 1445, 1475 |
| PspPPI | RGGWCCY | 2 cut(s) | 253, 1445 |
| PstI | CTGCAG | 2 cut(s) | 1986, 2227 |
| PsuI | RGATCY | 2 cut(s) | 1526, 1613 |
| PvuII | CAGCTG | 1 cut(s) | 224 |
| RsaI | GTAC | 1 cut(s) | 2236 |
| RsaNI | GTAC | 1 cut(s) | 2235 |
| RseI | CAYNNNNRTG | 3 cut(s) | 953, 1778, 2189 |
| SacI | GAGCTC | 3 cut(s) | 180, 724, 1366 |
| SaqAI | TTAA | 7 cut(s) | 54, 687, 1196, 1469, 1752, 1961, 2277 |
| Sau96I | GGNCC | 6 cut(s) | 23, 253, 1226, 1403, 1445, 1475 |
| ScaI | AGTACT | 1 cut(s) | 2236 |
| SchI | GAGTC | 5 cut(s) | 62, 302, 1588, 1886, 2393 |
| ScrFI | CCNGG | 7 cut(s) | 161, 257, 1260, 1311, 1347, 1386, 1428 |
| SduI | GDGCHC | 5 cut(s) | 81, 180, 601, 724, 1366 |
| SfaNI | GCATC | 4 cut(s) | 220, 1643, 1684, 1818 |
| SfcI | CTRYAG | 2 cut(s) | 1982, 2223 |
| SinI | GGWCC | 3 cut(s) | 23, 253, 1445 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 953, 1778, 2189 |
| SmlI | CTYRAG | 4 cut(s) | 350, 505, 1595, 2176 |
| SmoI | CTYRAG | 4 cut(s) | 350, 505, 1595, 2176 |
| SpeI | ACTAGT | 1 cut(s) | 1996 |
| SphI | GCATGC | 1 cut(s) | 127 |
| SsiI | CCGC | 9 cut(s) | 1004, 1010, 1127, 1130, 1181, 1401, 1653, 1674, 2393 |
| SspMI | CTAG | 8 cut(s) | 72, 114, 594, 732, 870, 1617, 1700, 1997 |
| SstI | GAGCTC | 3 cut(s) | 180, 724, 1366 |
| StyD4I | CCNGG | 7 cut(s) | 159, 255, 1258, 1309, 1345, 1384, 1426 |
| StyI | CCWWGG | 2 cut(s) | 81, 2160 |
| TaaI | ACNGT | 2 cut(s) | 388, 1092 |
| TaiI | ACGT | 1 cut(s) | 2324 |
| TaqI | TCGA | 4 cut(s) | 435, 710, 1848, 2127 |
| TaqII | GACCGA | 1 cut(s) | 11 |
| TatI | WGTACW | 1 cut(s) | 2234 |
| TauI | GCSGC | 2 cut(s) | 1132, 1404 |
| TfiI | GAWTC | 4 cut(s) | 149, 512, 673, 1850 |
| Tru1I | TTAA | 7 cut(s) | 54, 687, 1196, 1469, 1752, 1961, 2277 |
| Tru9I | TTAA | 7 cut(s) | 54, 687, 1196, 1469, 1752, 1961, 2277 |
| TscAI | CASTG | 4 cut(s) | 1047, 1272, 1953, 1981 |
| TseFI | GTSAC | 2 cut(s) | 553, 1878 |
| Tsp45I | GTSAC | 2 cut(s) | 553, 1878 |
| TspDTI | ATGAA | 5 cut(s) | 77, 351, 428, 1832, 2391 |
| TspGWI | ACGGA | 1 cut(s) | 1790 |
| TspRI | CASTG | 4 cut(s) | 1047, 1272, 1953, 1981 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 779, 1484 |
| VpaK11BI | GGWCC | 3 cut(s) | 23, 253, 1445 |
| XagI | CCTNNNNNAGG | 5 cut(s) | 1344, 1383, 1425, 1595, 2024 |
| XapI | RAATTY | 3 cut(s) | 338, 757, 1114 |
| XbaI | TCTAGA | 1 cut(s) | 593 |
| XceI | RCATGY | 2 cut(s) | 127, 2356 |
| XmiI | GTMKAC | 1 cut(s) | 1760 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1854 |
| XspI | CTAG | 8 cut(s) | 72, 114, 594, 732, 870, 1617, 1700, 1997 |
| ZrmI | AGTACT | 1 cut(s) | 2236 |