Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001973

Physical Location & Seq

Genomic Coordinates Reverse (-)

5560608 .. 5564461

Gene Structure 3854 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G005350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGAGCTGCTTTGGTCCATTGTTTCGTTGGAAGCCTCCTTCTCGACGCAAGGGAACGAAAGGCTCTAACCGGCCCAAGAGTCTTCCCTCAAAACAGAATGTCACCAAAAGCACACCAGCAGATGACTCTTATGGAGTTGCAGGAAATTCTGCTCTGACAATGGCGCTTAGGAAGAAGATCGTGACCTTCAGGGATGTCATGGACCTGCCAACATGTAATGCTTCTTCACCCATAAATCAGCTGGTGATGGGGTTGATGCTTGATCTCCAAAAGCTCTACCCTGAAATTGTACATCGTAGTCAATTATCAGAAATGAAGGGAGCATCTACAGAAAAGATCCTGGCCTCCTTCTGCAATGCACTGAAATCTATTGGAGATTCATGGATGACAAACCATGACAGGTTGGACAAACTGAGATATGATATGCCATCATTCAAAGAGAATGCCAATTGGGACCAACACGTTGGAACCGTGTTGGCAACACTTGAGTGCTTGATTAAGATGGCAAGGGACAAGTTTGATATGATGGATGAGGATGAGCAGAAGAGCAACTGCAGCCCTCGCGGTAACTCATTTGGGAGATTCTTAGGCGACACCGATTCAGAGAGTTACACCTCTAGCTGCCCTTCTCCAATCACACCATCCTCTGTCCTTCCTGAGGTGATAGATAGTGGTTCCCCCAAATCTCAAAGGAGATCGAAAGCTTCTTCCAGATCACCCGTTCTCTTGACTTTAAGAGTGCAGGCAGTGGGGAAACTCAACCCAATTGATGTTAAGCATTTGTCTCTTCACTTATCAAATGAAGGAGCCTCTGATAAAAGTAACAAATTGGTTGATGAACCATCAAGAGAGACAGTGGAAAGCAGCTCCGTGAAGTCATCAGAGGAAGAAAACAGATGTAGCAGCACAAGAGAGGACACAGCAGAGGTCCCAAATCCAAGTTTGAATGAGAATGATAGCAGAACTGTTATAATAGACAACAGAAACTGTGATGATGTTGGCATTTCAACCACAACCCCTGAAACTTTGGCAGAAGATATAACAGAATTGCCTCCACCCTCACCACCACCAAATCTCACAACAACAATACCTGTAACTCCACCACCACCACCATCACTACCCACATTGCAGCCAAAGGCTGCTGCGGCGCCTCCCTCACCGCCACCGCCACCAACACTTCCCACGTTGCAGCCAACTGTTGCAGCACTACCACCCCCGCCCCCACCGCCACCACCAACATTAGCACCACTAAATGCAGCACCTAAGGCACTGCGATCAACAAAAGCTGCTCCACCACCATCACTACCCACATTGCAGCCAAAGGCTGCTGCGACACCCCCCTCACCACCACTACCACCAACACTGCCTGTACCGCCATCACTGCCCACGTTGCAGCCAACTGTTGCAGCACCGCCACCCCCACCGCCACTGCCACCACCAACATTAACACCACTATATGCAGCACCTGCTAGGCAGTCACTGCCACCTCCACCTAAGGTACTGGGATCAACAAAAGCTGCTCCACCACCGCCACCACCTCTGCCCATGGCACCAGGATCAACAGCAGCAGGTCCACCAACCCCACTACCGATGCCGGTTGCAACTGCATCTGCTCCACCACCCCCACCACCCTTGCTGGTTGCAAATGGAGCTGCTCCACCACCCATGGGGAGGCCTGCAAATGGAGCTGCTCCACCCCCACCTCCTGCACTTGGTGGAAGATCCTTACTTATGAAGAAATCAAATACTAAATTGAAGAGATCATCCCAAATGGGAAGTCTGTATCGGACTCTCAAGGGGAAGGTGGAAGGGTCAAGCTTGAATGGTAAATCATCCAATGGGAGAAAGGGTGGAGCAGCTGGGAGCAGCGCAGCAGGTGGTAAAGGAATGGCTGATGCTCTAGCAGAGATGACAAAGAGATCAGCATACTTTCAACAAATTGAAGAAGATGTTCACAAATATTCAAAGGCTATAATAAATATGAGAACTACCCTGAGTTCTTTCCAAACAAAAGACATGAATGAGCTGTTAGAGTTCCAGAAGAAAGTAGAATCCATTCTTGAAAACTTGACTGATGAGACACAGGTTTTATCAAGGTTTGAAGGATTCCCTACAAAAAAGTTAGAAACAATGAGGGCAGCAGTAGCACTCCACTCACAGCTAAATGCAATGATCACTGAACTACACAATTGGAAAATAGAGGCTCCCCTAGGTCCGCTCCTTGACAAGATTGAACGTTATTTCACCAAGATCAAAGGAGAAATAGATAAACTGGAGCGAACAAAAGATGAAGAAATTAAGAAATTTAAGAGTCAAAATATCCACTTTGATTTCAATATCCTCATCCGGATAAAAGAAGCAATGGTGGATGTTTCCTCAGGCTGCATGGAGCTGGCACTAAAGGAAAGAAGAAAAGCAAAGGCCAGTGGAGAGGCACAAACTACTGGAACCAAAACTGATAAAAAGAAATTAAAGATATGCATTAAAATGCTGTGGAGGGCTTTTCAGTTTGCCTTCAAGGTCTATACCTTTGCTGGTGGACACGATGATCGTGCCGACATGCTCACAAGAGAACTAGCTACTGAAATTGAGTCTGACCCCTACCAGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231

Pfam Domains

Protein Families

No domains found.

Protein Analysis

870

Amino Acids

93.77

Weight (kDa)

9.28

Isoelectric Point (pI)

63.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11070 AT1G11070 AT1G11070 AT1G11070 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT4G04980 AT4G04980 AT4G04980
malus_domestica	MD05G1320300.v1.1 MD05G1320400.v1.1 MD05G1320600.v1.1 MD05G1320700.v1.1 MD05G1320900.v1.1 MD10G1299500.v1.1
prunus_persica	Prupe.4G041300_v2.0.a1 Prupe.4G041300_v2.0.a1
pyrus_communis	pycom05g29550 pycom05g29570
rosa_chinensis	RchiOBHm_Chr5g0007591 RchiOBHm_Chr5g0007601 RchiOBHm_Chr5g0021911 RchiOBHm_Chr7g0235111
rosa_laevigata	RLG00000013181 RLG00000031475
rosa_multiflora	Rmu_sc0015365.1_g000002 Rmu_sc0042291.1_g000002
rosa_roxburghii	Rroxscaffold_1G00068760 Rroxscaffold_1G00068770 Rroxscaffold_4G00304220
rosa_rugosa	Rorug04G0429100
rosa_samantha	Rh4DG240000 Rh5AG057100 Rh5AG057200 Rh5BG054200 Rh5CG064000 Rh5CG064100 Rh5DG053300 Rh6BG518400 Rh6CG523900
rosa_wichuraiana	Rw5G005350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	971
AarI	CACCTGC	2 cut(s)	1474, 1865
Acc36I	ACCTGC	4 cut(s)	213, 1474, 1559, 1865
AccB1I	GGYRCC	2 cut(s)	1147, 1549
AccBSI	CCGCTC	1 cut(s)	2218
AccII	CGCG	1 cut(s)	564
AccIII	TCCGGA	1 cut(s)	2346
AclI	AACGTT	1 cut(s)	2236
AclWI	GGATC	4 cut(s)	331, 1513, 1564, 1716
AcsI	RAATTY	2 cut(s)	145, 2303
AcuI	CTGAAG	1 cut(s)	172
AcyI	GRCGYC	1 cut(s)	1148
AdeI	CACNNNGTG	1 cut(s)	1715
AfaI	GTAC	3 cut(s)	291, 1371, 1500
AfiI	CCNNNNNNNGG	5 cut(s)	658, 1667, 1671, 1682, 1712
AflIII	ACRYGT	2 cut(s)	212, 460
AjnI	CCWGG	2 cut(s)	339, 1552
AleI	CACNNNNGTG	1 cut(s)	487
Alw26I	GTCTC	3 cut(s)	789, 845, 2072
AlwI	GGATC	4 cut(s)	331, 1513, 1564, 1716
AlwNI	CAGNNNCTG	3 cut(s)	987, 1466, 1480
Aor13HI	TCCGGA	1 cut(s)	2346
AoxI	GGCC	4 cut(s)	71, 342, 1673, 2421
ApoI	RAATTY	2 cut(s)	145, 2303
ArsI	GACNNNNNNTTYG	2 cut(s)	1762, 1794
Asp700I	GAANNNNTTC	2 cut(s)	1950, 2055
AspA2I	CCTAGG	1 cut(s)	2209
AspLEI	GCGC	3 cut(s)	166, 1150, 1871
AspS9I	GGNCC	7 cut(s)	14, 72, 202, 454, 928, 1571, 2213
AsuHPI	GGTGA	9 cut(s)	94, 219, 256, 673, 708, 1053, 1149, 1335, 2236
AvaII	GGWCC	6 cut(s)	14, 202, 454, 928, 1571, 2213
AvrII	CCTAGG	1 cut(s)	2209
AxyI	CCTNAGG	4 cut(s)	657, 1263, 1494, 2377
BanI	GGYRCC	2 cut(s)	1147, 1549
BarI	GAAGNNNNNNTAC	2 cut(s)	208, 240
BbsI	GAAGAC	1 cut(s)	74
BccI	CCATC	9 cut(s)	241, 436, 496, 520, 649, 850, 1120, 1306, 1384
BcgI	CGANNNNNNTGC	2 cut(s)	2534, 2568
BciT130I	CCWGG	2 cut(s)	341, 1554
BclI	TGATCA	1 cut(s)	2172
BcoDI	GTCTC	3 cut(s)	789, 845, 2072
BfaI	CTAG	5 cut(s)	618, 1470, 1901, 2210, 2576
BfmI	CTRYAG	2 cut(s)	327, 553
BfoI	RGCGCY	2 cut(s)	167, 1151
BfuAI	ACCTGC	4 cut(s)	213, 1474, 1559, 1865
BlnI	CCTAGG	1 cut(s)	2209
Bme1390I	CCNGG	2 cut(s)	341, 1554
Bme18I	GGWCC	6 cut(s)	14, 202, 454, 928, 1571, 2213
BmgT120I	GGNCC	7 cut(s)	14, 72, 202, 454, 928, 1571, 2213
BmiI	GGNNCC	9 cut(s)	455, 469, 676, 808, 930, 1149, 1551, 2205, 2449
BmrFI	CCNGG	2 cut(s)	341, 1554
BmrI	ACTGGG	1 cut(s)	1511
BmsI	GCATC	5 cut(s)	246, 332, 1581, 1616, 1885
BmuI	ACTGGG	1 cut(s)	1511
BpiI	GAAGAC	1 cut(s)	74
BpmI	CTGGAG	1 cut(s)	2294
Bpu10I	CCTNAGC	1 cut(s)	167
BpuEI	CTTGAG	2 cut(s)	506, 1778
BsaHI	GRCGYC	1 cut(s)	1148
BsaJI	CCNNGG	3 cut(s)	1545, 1665, 2209
BsaWI	WCCGGW	1 cut(s)	2346
BsaXI	ACNNNNNCTCC	2 cut(s)	1834, 1864
Bsc4I	CCNNNNNNNGG	5 cut(s)	658, 1667, 1671, 1682, 1712
Bse118I	RCCGGY	2 cut(s)	69, 1594
Bse1I	ACTGG	4 cut(s)	1506, 2277, 2424, 2449
Bse21I	CCTNAGG	4 cut(s)	657, 1263, 1494, 2377
Bse3DI	GCAATG	5 cut(s)	361, 1124, 1310, 2175, 2367
BseAI	TCCGGA	1 cut(s)	2346
BseBI	CCWGG	2 cut(s)	341, 1554
BseDI	CCNNGG	3 cut(s)	1545, 1665, 2209
BseGI	GGATG	9 cut(s)	199, 390, 535, 541, 641, 1763, 1832, 2343, 2374
BseLI	CCNNNNNNNGG	5 cut(s)	658, 1667, 1671, 1682, 1712
BseMI	GCAATG	5 cut(s)	361, 1124, 1310, 2175, 2367
BseMII	CTCAG	4 cut(s)	404, 648, 1985, 2391
BseNI	ACTGG	4 cut(s)	1506, 2277, 2424, 2449
BseYI	CCCAGC	1 cut(s)	1859
BsgI	GTGCAG	2 cut(s)	761, 1692
Bsh1236I	CGCG	1 cut(s)	564
BshFI	GGCC	4 cut(s)	73, 344, 1675, 2423
BshNI	GGYRCC	2 cut(s)	1147, 1549
BsiSI	CCGG	3 cut(s)	70, 1595, 2347
BslFI	GGGAC	3 cut(s)	467, 524, 914
BslI	CCNNNNNNNGG	5 cut(s)	658, 1667, 1671, 1682, 1712
BsmAI	GTCTC	3 cut(s)	789, 845, 2072
BsmFI	GGGAC	3 cut(s)	467, 524, 914
BsmI	GAATGC	1 cut(s)	448
BsnI	GGCC	4 cut(s)	73, 344, 1675, 2423
Bsp13I	TCCGGA	1 cut(s)	2346
Bsp1407I	TGTACA	1 cut(s)	289
Bsp19I	CCATGG	2 cut(s)	1545, 1665
BspANI	GGCC	4 cut(s)	73, 344, 1675, 2423
BspCNI	CTCAG	4 cut(s)	405, 649, 1986, 2390
BspEI	TCCGGA	1 cut(s)	2346
BspFNI	CGCG	1 cut(s)	564
BspLI	GGNNCC	9 cut(s)	455, 469, 676, 808, 930, 1149, 1551, 2205, 2449
BspMAI	CTGCAG	1 cut(s)	557
BspMI	ACCTGC	4 cut(s)	213, 1474, 1559, 1865
BspPI	GGATC	4 cut(s)	331, 1513, 1564, 1716
BspQI	GCTCTTC	1 cut(s)	539
BspT107I	GGYRCC	2 cut(s)	1147, 1549
BsrBI	CCGCTC	1 cut(s)	2218
BsrDI	GCAATG	5 cut(s)	361, 1124, 1310, 2175, 2367
BsrFI	RCCGGY	2 cut(s)	69, 1594
BsrGI	TGTACA	1 cut(s)	289
BsrI	ACTGG	4 cut(s)	1506, 2277, 2424, 2449
BssAI	RCCGGY	2 cut(s)	69, 1594
BssECI	CCNNGG	3 cut(s)	1545, 1665, 2209
BssNI	GRCGYC	1 cut(s)	1148
BssT1I	CCWWGG	3 cut(s)	1545, 1665, 2209
Bst2UI	CCWGG	2 cut(s)	341, 1554
Bst4CI	ACNGT	6 cut(s)	472, 856, 967, 989, 1198, 1402
Bst6I	CTCTTC	3 cut(s)	539, 792, 1751
BstACI	GRCGYC	1 cut(s)	1148
BstAPI	GCANNNNNTGC	2 cut(s)	1466, 1480
BstAUI	TGTACA	1 cut(s)	289
BstC8I	GCNNGC	3 cut(s)	744, 1677, 2394
BstDEI	CTNAG	8 cut(s)	167, 413, 586, 657, 1263, 1494, 1994, 2377
BstDSI	CCRYGG	2 cut(s)	1545, 1665
BstENI	CCTNNNNNAGG	1 cut(s)	656
BstF5I	GGATG	9 cut(s)	199, 390, 535, 541, 641, 1763, 1832, 2343, 2374
BstFNI	CGCG	1 cut(s)	564
BstH2I	RGCGCY	2 cut(s)	167, 1151
BstHHI	GCGC	3 cut(s)	166, 1150, 1871
BstMAI	GTCTC	3 cut(s)	789, 845, 2072
BstNI	CCWGG	2 cut(s)	341, 1554
BstNSI	RCATGY	2 cut(s)	216, 2563
BstSCI	CCNGG	2 cut(s)	339, 1552
BstSFI	CTRYAG	2 cut(s)	327, 553
BstUI	CGCG	1 cut(s)	564
BstV2I	GAAGAC	1 cut(s)	74
BstX2I	RGATCY	2 cut(s)	336, 1721
BstXI	CCANNNNNNTGG	1 cut(s)	464
BstYI	RGATCY	2 cut(s)	336, 1721
Bsu36I	CCTNAGG	4 cut(s)	657, 1263, 1494, 2377
BsuRI	GGCC	4 cut(s)	73, 344, 1675, 2423
BtgI	CCRYGG	2 cut(s)	1545, 1665
BtsCI	GGATG	9 cut(s)	199, 390, 535, 541, 641, 1763, 1832, 2343, 2374
BtsI	GCAGTG	6 cut(s)	753, 1268, 1361, 1379, 1427, 1478
BveI	ACCTGC	4 cut(s)	213, 1474, 1559, 1865
Cac8I	GCNNGC	3 cut(s)	744, 1677, 2394
CaiI	CAGNNNCTG	3 cut(s)	987, 1466, 1480
CfoI	GCGC	3 cut(s)	166, 1150, 1871
Cfr10I	RCCGGY	2 cut(s)	69, 1594
Cfr13I	GGNCC	7 cut(s)	14, 72, 202, 454, 928, 1571, 2213
CseI	GACGC	1 cut(s)	54
Csp6I	GTAC	3 cut(s)	290, 1370, 1499
CspCI	CAANNNNNGTGG	2 cut(s)	1614, 1649
CviAII	CATG	9 cut(s)	199, 213, 381, 395, 1546, 1666, 2017, 2386, 2560
CviQI	GTAC	3 cut(s)	290, 1370, 1499
DdeI	CTNAG	8 cut(s)	167, 413, 586, 657, 1263, 1494, 1994, 2377
DinI	GGCGCC	1 cut(s)	1149
DraIII	CACNNNGTG	1 cut(s)	1715
Eam1104I	CTCTTC	3 cut(s)	539, 792, 1751
EarI	CTCTTC	3 cut(s)	539, 792, 1751
Eco130I	CCWWGG	3 cut(s)	1545, 1665, 2209
Eco147I	AGGCCT	1 cut(s)	1675
Eco47I	GGWCC	6 cut(s)	14, 202, 454, 928, 1571, 2213
Eco57I	CTGAAG	1 cut(s)	172
Eco81I	CCTNAGG	4 cut(s)	657, 1263, 1494, 2377
EcoNI	CCTNNNNNAGG	1 cut(s)	656
EcoO109I	RGGNCCY	1 cut(s)	928
EcoRII	CCWGG	2 cut(s)	339, 1552
EcoT14I	CCWWGG	3 cut(s)	1545, 1665, 2209
EcoT22I	ATGCAT	1 cut(s)	2483
EgeI	GGCGCC	1 cut(s)	1149
EheI	GGCGCC	1 cut(s)	1149
ErhI	CCWWGG	3 cut(s)	1545, 1665, 2209
FaeI	CATG	9 cut(s)	202, 216, 384, 398, 1549, 1669, 2020, 2389, 2563
FaqI	GGGAC	3 cut(s)	467, 524, 914
FatI	CATG	9 cut(s)	198, 212, 380, 394, 1545, 1665, 2016, 2385, 2559
FauI	CCCGC	1 cut(s)	1224
FbaI	TGATCA	1 cut(s)	2172
FokI	GGATG	9 cut(s)	206, 397, 542, 548, 628, 1750, 1819, 2330, 2381
FspBI	CTAG	5 cut(s)	618, 1470, 1901, 2210, 2576
GlaI	GCGC	3 cut(s)	165, 1149, 1870
GsaI	CCCAGC	1 cut(s)	1863
GsuI	CTGGAG	1 cut(s)	2294
HaeII	RGCGCY	2 cut(s)	167, 1151
HaeIII	GGCC	4 cut(s)	73, 344, 1675, 2423
HapII	CCGG	3 cut(s)	70, 1595, 2347
HgaI	GACGC	1 cut(s)	54
HhaI	GCGC	3 cut(s)	166, 1150, 1871
Hin1I	GRCGYC	1 cut(s)	1148
Hin1II	CATG	9 cut(s)	202, 216, 384, 398, 1549, 1669, 2020, 2389, 2563
Hin6I	GCGC	3 cut(s)	164, 1148, 1869
HinP1I	GCGC	3 cut(s)	164, 1148, 1869
HindIII	AAGCTT	2 cut(s)	702, 1816
HpaII	CCGG	3 cut(s)	70, 1595, 2347
HphI	GGTGA	9 cut(s)	94, 219, 256, 673, 708, 1053, 1149, 1335, 2236
Hpy166II	GTNNAC	3 cut(s)	1574, 1954, 2540
Hpy188I	TCNGA	7 cut(s)	156, 310, 604, 814, 883, 1788, 2596
Hpy188III	TCNNGA	9 cut(s)	42, 181, 656, 711, 727, 846, 2038, 2060, 2347
Hpy8I	GTNNAC	3 cut(s)	1574, 1954, 2540
Hpy99I	CGWCG	1 cut(s)	48
HpyCH4III	ACNGT	6 cut(s)	472, 856, 967, 989, 1198, 1402
HpyCH4IV	ACGT	4 cut(s)	462, 1184, 1388, 2236
HpyF3I	CTNAG	8 cut(s)	167, 413, 586, 657, 1263, 1494, 1994, 2377
HpySE526I	ACGT	4 cut(s)	462, 1184, 1388, 2236
Hsp92I	GRCGYC	1 cut(s)	1148
Hsp92II	CATG	9 cut(s)	202, 216, 384, 398, 1549, 1669, 2020, 2389, 2563
HspAI	GCGC	3 cut(s)	164, 1148, 1869
KasI	GGCGCC	1 cut(s)	1147
Kpn2I	TCCGGA	1 cut(s)	2346
Ksp22I	TGATCA	1 cut(s)	2172
LguI	GCTCTTC	1 cut(s)	539
LweI	GCATC	5 cut(s)	246, 332, 1581, 1616, 1885
MaeI	CTAG	5 cut(s)	618, 1470, 1901, 2210, 2576
MaeII	ACGT	4 cut(s)	462, 1184, 1388, 2236
MaeIII	GTNAC	7 cut(s)	100, 181, 566, 608, 821, 1093, 1476
MbiI	CCGCTC	1 cut(s)	2218
MfeI	CAATTG	3 cut(s)	448, 765, 2188
MflI	RGATCY	2 cut(s)	336, 1721
Mly113I	GGCGCC	1 cut(s)	1148
MlyI	GAGTC	5 cut(s)	88, 119, 1783, 2320, 2600
MmeI	TCCRAC	3 cut(s)	8, 384, 445
Mph1103I	ATGCAT	1 cut(s)	2483
MroI	TCCGGA	1 cut(s)	2346
MroXI	GAANNNNTTC	2 cut(s)	1950, 2055
MseI	TTAA	8 cut(s)	498, 734, 774, 1445, 2298, 2307, 2471, 2484
MslI	CAYNNNNRTG	2 cut(s)	487, 2486
MspA1I	CMGCKG	2 cut(s)	241, 1859
MspI	CCGG	3 cut(s)	70, 1595, 2347
MspR9I	CCNGG	2 cut(s)	341, 1554
MunI	CAATTG	3 cut(s)	448, 765, 2188
Mva1269I	GAATGC	1 cut(s)	448
MvaI	CCWGG	2 cut(s)	341, 1554
MvnI	CGCG	1 cut(s)	564
NarI	GGCGCC	1 cut(s)	1148
NcoI	CCATGG	2 cut(s)	1545, 1665
NlaIII	CATG	9 cut(s)	202, 216, 384, 398, 1549, 1669, 2020, 2389, 2563
NlaIV	GGNNCC	9 cut(s)	455, 469, 676, 808, 930, 1149, 1551, 2205, 2449
NmuCI	GTSAC	3 cut(s)	100, 181, 1476
NsiI	ATGCAT	1 cut(s)	2483
NspI	RCATGY	2 cut(s)	216, 2563
OliI	CACNNNNGTG	1 cut(s)	487
PaqCI	CACCTGC	2 cut(s)	1474, 1865
PceI	AGGCCT	1 cut(s)	1675
PciI	ACATGT	1 cut(s)	212
PciSI	GCTCTTC	1 cut(s)	539
PcsI	WCGNNNNNNNCGW	1 cut(s)	468
PctI	GAATGC	1 cut(s)	448
PdmI	GAANNNNTTC	2 cut(s)	1950, 2055
PfeI	GAWTC	5 cut(s)	377, 582, 599, 2051, 2106
PleI	GAGTC	5 cut(s)	87, 119, 1783, 2319, 2599
PluTI	GGCGCC	1 cut(s)	1151
PpsI	GAGTC	5 cut(s)	87, 119, 1783, 2319, 2599
PpuMI	RGGWCCY	1 cut(s)	928
PscI	ACATGT	1 cut(s)	212
PsiI	TTATAA	1 cut(s)	971
Psp1406I	AACGTT	1 cut(s)	2236
Psp5II	RGGWCCY	1 cut(s)	928
Psp6I	CCWGG	2 cut(s)	339, 1552
PspFI	CCCAGC	1 cut(s)	1859
PspGI	CCWGG	2 cut(s)	339, 1552
PspN4I	GGNNCC	9 cut(s)	455, 469, 676, 808, 930, 1149, 1551, 2205, 2449
PspPI	GGNCC	7 cut(s)	14, 72, 202, 454, 928, 1571, 2213
PspPPI	RGGWCCY	1 cut(s)	928
PstI	CTGCAG	1 cut(s)	557
PstNI	CAGNNNCTG	3 cut(s)	987, 1466, 1480
PsuI	RGATCY	2 cut(s)	336, 1721
PvuII	CAGCTG	2 cut(s)	241, 1859
RsaI	GTAC	3 cut(s)	291, 1371, 1500
RsaNI	GTAC	3 cut(s)	290, 1370, 1499
RseI	CAYNNNNRTG	2 cut(s)	487, 2486
SapI	GCTCTTC	1 cut(s)	539
SaqAI	TTAA	8 cut(s)	498, 734, 774, 1445, 2298, 2307, 2471, 2484
Sau96I	GGNCC	7 cut(s)	14, 72, 202, 454, 928, 1571, 2213
SchI	GAGTC	5 cut(s)	88, 119, 1783, 2320, 2600
ScrFI	CCNGG	2 cut(s)	341, 1554
SfaNI	GCATC	5 cut(s)	246, 332, 1581, 1616, 1885
SfcI	CTRYAG	2 cut(s)	327, 553
SfoI	GGCGCC	1 cut(s)	1149
SinI	GGWCC	6 cut(s)	14, 202, 454, 928, 1571, 2213
SmiMI	CAYNNNNRTG	2 cut(s)	487, 2486
SmlI	CTYRAG	2 cut(s)	485, 1793
SmoI	CTYRAG	2 cut(s)	485, 1793
SseBI	AGGCCT	1 cut(s)	1675
SspDI	GGCGCC	1 cut(s)	1147
SspI	AATATT	1 cut(s)	1961
SspMI	CTAG	5 cut(s)	618, 1470, 1901, 2210, 2576
StuI	AGGCCT	1 cut(s)	1675
StyD4I	CCNGG	2 cut(s)	339, 1552
StyI	CCWWGG	3 cut(s)	1545, 1665, 2209
TaaI	ACNGT	6 cut(s)	472, 856, 967, 989, 1198, 1402
TaiI	ACGT	4 cut(s)	465, 1187, 1391, 2239
TaqI	TCGA	2 cut(s)	43, 698
TatI	WGTACW	1 cut(s)	289
TauI	GCSGC	1 cut(s)	1148
TfiI	GAWTC	5 cut(s)	377, 582, 599, 2051, 2106
Tru1I	TTAA	8 cut(s)	498, 734, 774, 1445, 2298, 2307, 2471, 2484
Tru9I	TTAA	8 cut(s)	498, 734, 774, 1445, 2298, 2307, 2471, 2484
TseFI	GTSAC	3 cut(s)	100, 181, 1476
Tsp45I	GTSAC	3 cut(s)	100, 181, 1476
TspDTI	ATGAA	7 cut(s)	329, 369, 816, 852, 1748, 2033, 2304
TspGWI	ACGGA	1 cut(s)	859
VpaK11BI	GGWCC	6 cut(s)	14, 202, 454, 928, 1571, 2213
XagI	CCTNNNNNAGG	1 cut(s)	656
XapI	RAATTY	2 cut(s)	145, 2303
XceI	RCATGY	2 cut(s)	216, 2563
XcmI	CCANNNNNNNNNTGG	2 cut(s)	24, 238
XmaJI	CCTAGG	1 cut(s)	2209
XmnI	GAANNNNTTC	2 cut(s)	1950, 2055
XspI	CTAG	5 cut(s)	618, 1470, 1901, 2210, 2576
Zsp2I	ATGCAT	1 cut(s)	2483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.