Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0001973

Physical Location & Seq

Genomic Coordinates Forward (+)

5501902 .. 5506147

Gene Structure 4246 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031475

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2640 bp

ATGACCATGAGCTGCTTTGGTCCATTGTTTCGTTGGAAGCCTCCTTCTCGACGCAAGGGAACGAAAGGCTCTAACCGGCCCAAGAGTCTTCTCTCGAAACAGAATGTCACCAAAAGCACACCAGCAGACGACTCTTATGGAGTTGCAGGAAATTCTGCTCTGACGATGGCGCTTAGGAAGAAGATCGTGACCTTCAGGGATGTCATGGACCTGCCAACATGTAATGCTTCTTCACCCATAAATCAGCTGGTGATGGGGTTGATGCTCGATCTCCAAAAGCTCTACCCTGAAATTGTACGTCGTAGTCAATTATCAGAAATGAAGGGAGCATCTACAGAAAAGATCCTGGCCTCCTTCTGCAATGCACTGAAATCTATTGGAGATTCATGGATGACAAACCATGACAGGTTGGACAAACTGAGATATGATATGCCATCATTCAAAGAGAATGCCAATTGGGACCAACACGTTGGAACCGTGTTGGCAACACTTGAGTGCTTGATTAAGATGGCAAGGGACAAGTTTGATATGATGGACGAGGATGAGCAGAAGAGCAACTGCAGTCCTCGCGGTAACTCATTTGGGAGATTCTTAGGCGACACCGATTCAGAGAGTTACACCTCTAGCTGCCCTTCTCCAATCACACCATCCTCTGTCCTTCCTGAGGTGATAGATAGTGGTTCCCCCAAATCTCAAAGGAGATCAAAAGCTTCTTCCAGATCACCCGTTCTCTTGACTTTAAGAGTGCAGGCAGTGGGGAAACTCAACCCAATTGATGTTAAGCATTTGTCTCTTCACTTATCAAATGAAGGAGCCTCTGATAAAAGTAACAAATTGGTTGATGAACCATCAAGAGAGACAGTGGAAAGCAGCTCCGAGAAGTCATCAGAGGAAGAAAACAGATGTAGCAGCACAAGAGAGGACACAGCAGAGGTCCCAAATCCAAGTTCGAATGAGAATGATAGCAGAACTGTTATAATAGACAACAGAAACTGTGATAATGTTGGCATTTCAACCACAGCCCCTGAAACTTTGGCAGTAGATATAACAGAATTGCCTCCACCCTCACCGCCACCAAATCTCACAACAACAATACCTGTAACTCCACCACCACCACCATCACTACCCACATTGCAGCCAAAGGCTGCTGCGGCACCTCCCTCACCGCCACCGCCACCACCACCAACACTGCCTGTATCACCATCACTGCCCACGTTGCAGCCAACTGTTGCAGCAGTACCACCCCCGCCCCCACCGCCACCACCAACATTAGCACCACTAAATGCAGCACCTGCTAGGCGGCCAGCACCACCTCCACCTGAGGCACTGCGATCAACAAAAGCTGCTCCACCACCATCACTACCCACATTGCAGCCAAAGGCTGCTGCGACACCCCCCTCACCGCCACTACCACCAACACTGCCTGTACCGCTATCACTGCCCACGTTGCAGCCAACTGTTGCAGCACCGCCACCCCCACCGCCACTGCCACCACCAACAATAACACCACTATATGCAGCACCTGCTAGGCAGTCACTGCCACCTCCACCTAAGGTACTGGGATCAACAAAAGCTGCTCCACCACCGCCACCACCTCTGCCCATGGCACCGGGATCAACAGCAGCAGGTCCACCAACCCCACTACCGATGCCGCTTGCAACTGCATCTGCTCCACCACCCCCACCACCCTTGCTGCTTGCAAATGGAGCTGCTCCACCCCCACCTCCTGCACTTGGTGGAAGATCCTTACTTATGAAGAAATCAAATACTAAATTGAAGAGATCATCCCAAATGGGAAGTCTGTATCGGACTCTCAAGGGGAAGGTGGAAGGGTCAAGCTTGAATGGTAAATCAACCAATGGGAGAAAGGGTGGAGCAGCTGGGAGCAGCGCAGCAGGTGGTAAAGGAATGGCTGATGCTCTAGCAGAGATGACAAAGAGATCAGCATACTTTCAACAAATTGAAGAAGATGTTCAGAAATATTCAAAGGCTATAATAAATATGAGAACTACCCTGAGTTCTTTCCAAACAAAAGACATGAATGAGCTGTTAGAGTTCCACAAGAAAGTAGAATCCATTCTTGAAAACTTGACTGATGAGACACAGGTTTTATCAAGGTTTGACGGATTCCCTACAAAAAAGTTAGAGACAATGAGGGCAGCAGTAGCACTCCACTCACAGCTAAATGCAATGATCACTGAACTACACAATTGGAAAATAGAGGCTCCCCTAGGTCCGCTCCTTGACAAGATTGAACGTTATTTCACCAAGATCAAAGGAGAAATAGATAAACTGGAGCGAACAAAAGATGAAGAAATTAAGAAATTTAAGAGTCAAAATATCCACTTTGATTTCAATATCCTCATCCGGATAAAAGAAGCAATGGTGGATGTTTCCTCAGGCTGCATGGAGCTAGCACTAAAGGAAAGAAGAGAAGCAAAGGCCAGTGGAGAGGCACAAACTACTGGAACCAAAACTGATAAAAAGCAATTAAAGATATGCATTAAAATGCTGTGGAGGGCTTTTCAGTTTGCCTTCAAGGTCTATACCTTTGCTGGTGGACACGATGATCGTGCCGACATGCTCACAAGAGAACTAGCTACTGAAATTGAGTCTGACCCCTACCAGCACCGAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231

Pfam Domains

Protein Families

No domains found.

Protein Analysis

880

Amino Acids

94.87

Weight (kDa)

9.26

Isoelectric Point (pI)

66.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11070 AT1G11070 AT1G11070 AT1G11070 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT4G04980 AT4G04980 AT4G04980
malus_domestica	MD05G1320300.v1.1 MD05G1320400.v1.1 MD05G1320600.v1.1 MD05G1320700.v1.1 MD05G1320900.v1.1 MD10G1299500.v1.1
prunus_persica	Prupe.4G041300_v2.0.a1 Prupe.4G041300_v2.0.a1
pyrus_communis	pycom05g29550 pycom05g29570
rosa_chinensis	RchiOBHm_Chr5g0007591 RchiOBHm_Chr5g0007601 RchiOBHm_Chr5g0021911 RchiOBHm_Chr7g0235111
rosa_laevigata	RLG00000013181 RLG00000031475
rosa_multiflora	Rmu_sc0015365.1_g000002 Rmu_sc0042291.1_g000002
rosa_roxburghii	Rroxscaffold_1G00068760 Rroxscaffold_1G00068770 Rroxscaffold_4G00304220
rosa_rugosa	Rorug04G0429100
rosa_samantha	Rh4DG240000 Rh5AG057100 Rh5AG057200 Rh5BG054200 Rh5CG064000 Rh5CG064100 Rh5DG053300 Rh6BG518400 Rh6CG523900
rosa_wichuraiana	Rw5G005350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	977
AarI	CACCTGC	3 cut(s)	1300, 1531, 1886
Acc36I	ACCTGC	5 cut(s)	219, 1300, 1531, 1616, 1886
AccB1I	GGYRCC	2 cut(s)	1153, 1606
AccBSI	CCGCTC	1 cut(s)	2239
AccII	CGCG	1 cut(s)	570
AccIII	TCCGGA	1 cut(s)	2367
AclI	AACGTT	1 cut(s)	2257
AclWI	GGATC	4 cut(s)	337, 1570, 1621, 1737
AcoI	YGGCCR	1 cut(s)	1301
AcsI	RAATTY	2 cut(s)	151, 2324
AcuI	CTGAAG	1 cut(s)	178
AdeI	CACNNNGTG	1 cut(s)	1736
AfaI	GTAC	4 cut(s)	297, 1239, 1428, 1557
AfiI	CCNNNNNNNGG	2 cut(s)	664, 1733
AflIII	ACRYGT	2 cut(s)	218, 466
AjnI	CCWGG	1 cut(s)	345
AjuI	GAANNNNNNNTTGG	2 cut(s)	931, 963
AleI	CACNNNNGTG	1 cut(s)	493
Alw26I	GTCTC	4 cut(s)	795, 851, 2093, 2141
AlwI	GGATC	4 cut(s)	337, 1570, 1621, 1737
AlwNI	CAGNNNCTG	5 cut(s)	993, 1025, 1292, 1523, 1537
Aor13HI	TCCGGA	1 cut(s)	2367
AoxI	GGCC	4 cut(s)	77, 348, 1301, 2442
ApoI	RAATTY	2 cut(s)	151, 2324
ArsI	GACNNNNNNTTYG	2 cut(s)	1783, 1815
Asp700I	GAANNNNTTC	2 cut(s)	1971, 2076
AspA2I	CCTAGG	1 cut(s)	2230
AspLEI	GCGC	2 cut(s)	172, 1892
AspS9I	GGNCC	7 cut(s)	20, 78, 208, 460, 934, 1628, 2234
AsuC2I	CCSGG	1 cut(s)	1611
AsuII	TTCGAA	1 cut(s)	950
AsuNHI	GCTAGC	1 cut(s)	2413
AvaII	GGWCC	6 cut(s)	20, 208, 460, 934, 1628, 2234
AvrII	CCTAGG	1 cut(s)	2230
AxyI	CCTNAGG	4 cut(s)	663, 1320, 1551, 2398
BanI	GGYRCC	2 cut(s)	1153, 1606
BarI	GAAGNNNNNNTAC	2 cut(s)	214, 246
BbsI	GAAGAC	1 cut(s)	80
BcgI	CGANNNNNNTGC	2 cut(s)	2555, 2589
BciT130I	CCWGG	1 cut(s)	347
BclI	TGATCA	1 cut(s)	2193
BcnI	CCSGG	1 cut(s)	1611
BcoDI	GTCTC	4 cut(s)	795, 851, 2093, 2141
BfaI	CTAG	7 cut(s)	624, 1296, 1527, 1922, 2231, 2414, 2597
BfmI	CTRYAG	2 cut(s)	333, 559
BfoI	RGCGCY	1 cut(s)	173
BfuAI	ACCTGC	5 cut(s)	219, 1300, 1531, 1616, 1886
BlnI	CCTAGG	1 cut(s)	2230
Bme1390I	CCNGG	2 cut(s)	347, 1611
Bme18I	GGWCC	6 cut(s)	20, 208, 460, 934, 1628, 2234
BmgT120I	GGNCC	7 cut(s)	20, 78, 208, 460, 934, 1628, 2234
BmiI	GGNNCC	9 cut(s)	461, 475, 682, 814, 936, 1155, 1608, 2226, 2470
BmrFI	CCNGG	2 cut(s)	347, 1611
BmrI	ACTGGG	1 cut(s)	1568
BmsI	GCATC	5 cut(s)	252, 338, 1638, 1673, 1906
BmtI	GCTAGC	1 cut(s)	2417
BmuI	ACTGGG	1 cut(s)	1568
BpiI	GAAGAC	1 cut(s)	80
BpmI	CTGGAG	1 cut(s)	2315
Bpu10I	CCTNAGC	1 cut(s)	173
Bpu14I	TTCGAA	1 cut(s)	950
BpuEI	CTTGAG	2 cut(s)	512, 1799
BpuMI	CCSGG	1 cut(s)	1611
BsaJI	CCNNGG	2 cut(s)	1602, 2230
BsaWI	WCCGGW	1 cut(s)	2367
BsaXI	ACNNNNNCTCC	2 cut(s)	1855, 1885
Bsc4I	CCNNNNNNNGG	2 cut(s)	664, 1733
Bse118I	RCCGGY	1 cut(s)	75
Bse1I	ACTGG	4 cut(s)	1563, 2298, 2445, 2470
Bse21I	CCTNAGG	4 cut(s)	663, 1320, 1551, 2398
Bse3DI	GCAATG	5 cut(s)	367, 1130, 1367, 2196, 2388
BseAI	TCCGGA	1 cut(s)	2367
BseBI	CCWGG	1 cut(s)	347
BseDI	CCNNGG	2 cut(s)	1602, 2230
BseGI	GGATG	7 cut(s)	205, 396, 547, 647, 1784, 2364, 2395
BseLI	CCNNNNNNNGG	2 cut(s)	664, 1733
BseMI	GCAATG	5 cut(s)	367, 1130, 1367, 2196, 2388
BseMII	CTCAG	5 cut(s)	410, 654, 1311, 2006, 2412
BseNI	ACTGG	4 cut(s)	1563, 2298, 2445, 2470
BseYI	CCCAGC	1 cut(s)	1880
BsgI	GTGCAG	2 cut(s)	767, 1713
Bsh1236I	CGCG	1 cut(s)	570
BshFI	GGCC	4 cut(s)	79, 350, 1303, 2444
BshNI	GGYRCC	2 cut(s)	1153, 1606
BsiSI	CCGG	3 cut(s)	76, 1610, 2368
BslFI	GGGAC	3 cut(s)	473, 530, 920
BslI	CCNNNNNNNGG	2 cut(s)	664, 1733
BsmAI	GTCTC	4 cut(s)	795, 851, 2093, 2141
BsmFI	GGGAC	3 cut(s)	473, 530, 920
BsmI	GAATGC	1 cut(s)	454
BsnI	GGCC	4 cut(s)	79, 350, 1303, 2444
Bsp119I	TTCGAA	1 cut(s)	950
Bsp13I	TCCGGA	1 cut(s)	2367
Bsp19I	CCATGG	1 cut(s)	1602
BspANI	GGCC	4 cut(s)	79, 350, 1303, 2444
BspCNI	CTCAG	5 cut(s)	411, 655, 1312, 2007, 2411
BspEI	TCCGGA	1 cut(s)	2367
BspFNI	CGCG	1 cut(s)	570
BspLI	GGNNCC	9 cut(s)	461, 475, 682, 814, 936, 1155, 1608, 2226, 2470
BspMAI	CTGCAG	1 cut(s)	563
BspMI	ACCTGC	5 cut(s)	219, 1300, 1531, 1616, 1886
BspOI	GCTAGC	1 cut(s)	2417
BspPI	GGATC	4 cut(s)	337, 1570, 1621, 1737
BspQI	GCTCTTC	1 cut(s)	545
BspT104I	TTCGAA	1 cut(s)	950
BspT107I	GGYRCC	2 cut(s)	1153, 1606
BsrBI	CCGCTC	1 cut(s)	2239
BsrDI	GCAATG	5 cut(s)	367, 1130, 1367, 2196, 2388
BsrFI	RCCGGY	1 cut(s)	75
BsrI	ACTGG	4 cut(s)	1563, 2298, 2445, 2470
BssAI	RCCGGY	1 cut(s)	75
BssECI	CCNNGG	2 cut(s)	1602, 2230
BssT1I	CCWWGG	2 cut(s)	1602, 2230
Bst2UI	CCWGG	1 cut(s)	347
Bst4CI	ACNGT	6 cut(s)	478, 862, 973, 995, 1228, 1459
Bst6I	CTCTTC	4 cut(s)	545, 798, 1772, 2425
BstAPI	GCANNNNNTGC	3 cut(s)	1292, 1523, 1537
BstBI	TTCGAA	1 cut(s)	950
BstC8I	GCNNGC	5 cut(s)	750, 1305, 1656, 1698, 2415
BstDEI	CTNAG	8 cut(s)	173, 419, 592, 663, 1320, 1551, 2015, 2398
BstDSI	CCRYGG	1 cut(s)	1602
BstENI	CCTNNNNNAGG	1 cut(s)	662
BstF5I	GGATG	7 cut(s)	205, 396, 547, 647, 1784, 2364, 2395
BstFNI	CGCG	1 cut(s)	570
BstH2I	RGCGCY	1 cut(s)	173
BstHHI	GCGC	2 cut(s)	172, 1892
BstMAI	GTCTC	4 cut(s)	795, 851, 2093, 2141
BstNI	CCWGG	1 cut(s)	347
BstNSI	RCATGY	2 cut(s)	222, 2584
BstSCI	CCNGG	2 cut(s)	345, 1609
BstSFI	CTRYAG	2 cut(s)	333, 559
BstUI	CGCG	1 cut(s)	570
BstV2I	GAAGAC	1 cut(s)	80
BstX2I	RGATCY	2 cut(s)	342, 1742
BstXI	CCANNNNNNTGG	1 cut(s)	470
BstYI	RGATCY	2 cut(s)	342, 1742
Bsu36I	CCTNAGG	4 cut(s)	663, 1320, 1551, 2398
BsuRI	GGCC	4 cut(s)	79, 350, 1303, 2444
BtgI	CCRYGG	1 cut(s)	1602
BtsCI	GGATG	7 cut(s)	205, 396, 547, 647, 1784, 2364, 2395
BtsI	GCAGTG	8 cut(s)	759, 1187, 1205, 1325, 1418, 1436, 1484, 1535
BveI	ACCTGC	5 cut(s)	219, 1300, 1531, 1616, 1886
Cac8I	GCNNGC	5 cut(s)	750, 1305, 1656, 1698, 2415
CaiI	CAGNNNCTG	5 cut(s)	993, 1025, 1292, 1523, 1537
CfoI	GCGC	2 cut(s)	172, 1892
Cfr10I	RCCGGY	1 cut(s)	75
Cfr13I	GGNCC	7 cut(s)	20, 78, 208, 460, 934, 1628, 2234
CseI	GACGC	1 cut(s)	60
Csp6I	GTAC	4 cut(s)	296, 1238, 1427, 1556
CspCI	CAANNNNNGTGG	2 cut(s)	1671, 1706
CviAII	CATG	9 cut(s)	7, 205, 219, 387, 401, 1603, 2038, 2407, 2581
CviQI	GTAC	4 cut(s)	296, 1238, 1427, 1556
DdeI	CTNAG	8 cut(s)	173, 419, 592, 663, 1320, 1551, 2015, 2398
DraIII	CACNNNGTG	1 cut(s)	1736
EaeI	YGGCCR	1 cut(s)	1301
Eam1104I	CTCTTC	4 cut(s)	545, 798, 1772, 2425
EarI	CTCTTC	4 cut(s)	545, 798, 1772, 2425
Eco130I	CCWWGG	2 cut(s)	1602, 2230
Eco47I	GGWCC	6 cut(s)	20, 208, 460, 934, 1628, 2234
Eco57I	CTGAAG	1 cut(s)	178
Eco81I	CCTNAGG	4 cut(s)	663, 1320, 1551, 2398
EcoNI	CCTNNNNNAGG	1 cut(s)	662
EcoO109I	RGGNCCY	1 cut(s)	934
EcoRII	CCWGG	1 cut(s)	345
EcoT14I	CCWWGG	2 cut(s)	1602, 2230
EcoT22I	ATGCAT	1 cut(s)	2504
ErhI	CCWWGG	2 cut(s)	1602, 2230
FaeI	CATG	9 cut(s)	10, 208, 222, 390, 404, 1606, 2041, 2410, 2584
FaqI	GGGAC	3 cut(s)	473, 530, 920
FatI	CATG	9 cut(s)	6, 204, 218, 386, 400, 1602, 2037, 2406, 2580
FauI	CCCGC	1 cut(s)	1254
FbaI	TGATCA	1 cut(s)	2193
FokI	GGATG	7 cut(s)	212, 403, 554, 634, 1771, 2351, 2402
FspBI	CTAG	7 cut(s)	624, 1296, 1527, 1922, 2231, 2414, 2597
GlaI	GCGC	2 cut(s)	171, 1891
GsaI	CCCAGC	1 cut(s)	1884
GsuI	CTGGAG	1 cut(s)	2315
HaeII	RGCGCY	1 cut(s)	173
HaeIII	GGCC	4 cut(s)	79, 350, 1303, 2444
HapII	CCGG	3 cut(s)	76, 1610, 2368
HgaI	GACGC	1 cut(s)	60
HhaI	GCGC	2 cut(s)	172, 1892
Hin1II	CATG	9 cut(s)	10, 208, 222, 390, 404, 1606, 2041, 2410, 2584
Hin6I	GCGC	2 cut(s)	170, 1890
HinP1I	GCGC	2 cut(s)	170, 1890
HindIII	AAGCTT	2 cut(s)	708, 1837
HpaII	CCGG	3 cut(s)	76, 1610, 2368
Hpy166II	GTNNAC	2 cut(s)	1631, 2561
Hpy188I	TCNGA	9 cut(s)	162, 316, 610, 820, 877, 889, 1809, 1977, 2617
Hpy188III	TCNNGA	9 cut(s)	48, 94, 187, 662, 717, 733, 852, 2081, 2368
Hpy8I	GTNNAC	2 cut(s)	1631, 2561
Hpy99I	CGWCG	2 cut(s)	54, 303
HpyCH4III	ACNGT	6 cut(s)	478, 862, 973, 995, 1228, 1459
HpyCH4IV	ACGT	5 cut(s)	298, 468, 1214, 1445, 2257
HpyF3I	CTNAG	8 cut(s)	173, 419, 592, 663, 1320, 1551, 2015, 2398
HpySE526I	ACGT	5 cut(s)	298, 468, 1214, 1445, 2257
Hsp92II	CATG	9 cut(s)	10, 208, 222, 390, 404, 1606, 2041, 2410, 2584
HspAI	GCGC	2 cut(s)	170, 1890
Kpn2I	TCCGGA	1 cut(s)	2367
Ksp22I	TGATCA	1 cut(s)	2193
LguI	GCTCTTC	1 cut(s)	545
LweI	GCATC	5 cut(s)	252, 338, 1638, 1673, 1906
MaeI	CTAG	7 cut(s)	624, 1296, 1527, 1922, 2231, 2414, 2597
MaeII	ACGT	5 cut(s)	298, 468, 1214, 1445, 2257
MaeIII	GTNAC	7 cut(s)	106, 187, 572, 614, 827, 1099, 1533
MbiI	CCGCTC	1 cut(s)	2239
MfeI	CAATTG	3 cut(s)	454, 771, 2209
MflI	RGATCY	2 cut(s)	342, 1742
MlyI	GAGTC	5 cut(s)	94, 125, 1804, 2341, 2621
MmeI	TCCRAC	3 cut(s)	14, 390, 451
Mph1103I	ATGCAT	1 cut(s)	2504
MroI	TCCGGA	1 cut(s)	2367
MroXI	GAANNNNTTC	2 cut(s)	1971, 2076
MseI	TTAA	7 cut(s)	504, 740, 780, 2319, 2328, 2492, 2505
MslI	CAYNNNNRTG	2 cut(s)	493, 2507
MspA1I	CMGCKG	2 cut(s)	247, 1880
MspI	CCGG	3 cut(s)	76, 1610, 2368
MspR9I	CCNGG	2 cut(s)	347, 1611
MunI	CAATTG	3 cut(s)	454, 771, 2209
Mva1269I	GAATGC	1 cut(s)	454
MvaI	CCWGG	1 cut(s)	347
MvnI	CGCG	1 cut(s)	570
NciI	CCSGG	1 cut(s)	1611
NcoI	CCATGG	1 cut(s)	1602
NheI	GCTAGC	1 cut(s)	2413
NlaIII	CATG	9 cut(s)	10, 208, 222, 390, 404, 1606, 2041, 2410, 2584
NlaIV	GGNNCC	9 cut(s)	461, 475, 682, 814, 936, 1155, 1608, 2226, 2470
NmuCI	GTSAC	3 cut(s)	106, 187, 1533
NsiI	ATGCAT	1 cut(s)	2504
NspI	RCATGY	2 cut(s)	222, 2584
NspV	TTCGAA	1 cut(s)	950
OliI	CACNNNNGTG	1 cut(s)	493
PaqCI	CACCTGC	3 cut(s)	1300, 1531, 1886
PciI	ACATGT	1 cut(s)	218
PciSI	GCTCTTC	1 cut(s)	545
PcsI	WCGNNNNNNNCGW	1 cut(s)	474
PctI	GAATGC	1 cut(s)	454
PdmI	GAANNNNTTC	2 cut(s)	1971, 2076
PfeI	GAWTC	5 cut(s)	383, 588, 605, 2072, 2127
PleI	GAGTC	5 cut(s)	93, 125, 1804, 2340, 2620
PpsI	GAGTC	5 cut(s)	93, 125, 1804, 2340, 2620
PpuMI	RGGWCCY	1 cut(s)	934
PscI	ACATGT	1 cut(s)	218
PsiI	TTATAA	1 cut(s)	977
Psp1406I	AACGTT	1 cut(s)	2257
Psp5II	RGGWCCY	1 cut(s)	934
Psp6I	CCWGG	1 cut(s)	345
PspFI	CCCAGC	1 cut(s)	1880
PspGI	CCWGG	1 cut(s)	345
PspN4I	GGNNCC	9 cut(s)	461, 475, 682, 814, 936, 1155, 1608, 2226, 2470
PspPI	GGNCC	7 cut(s)	20, 78, 208, 460, 934, 1628, 2234
PspPPI	RGGWCCY	1 cut(s)	934
PstI	CTGCAG	1 cut(s)	563
PstNI	CAGNNNCTG	5 cut(s)	993, 1025, 1292, 1523, 1537
PsuI	RGATCY	2 cut(s)	342, 1742
PvuII	CAGCTG	2 cut(s)	247, 1880
RsaI	GTAC	4 cut(s)	297, 1239, 1428, 1557
RsaNI	GTAC	4 cut(s)	296, 1238, 1427, 1556
RseI	CAYNNNNRTG	2 cut(s)	493, 2507
SapI	GCTCTTC	1 cut(s)	545
SaqAI	TTAA	7 cut(s)	504, 740, 780, 2319, 2328, 2492, 2505
Sau96I	GGNCC	7 cut(s)	20, 78, 208, 460, 934, 1628, 2234
SchI	GAGTC	5 cut(s)	94, 125, 1804, 2341, 2621
ScrFI	CCNGG	2 cut(s)	347, 1611
SfaNI	GCATC	5 cut(s)	252, 338, 1638, 1673, 1906
SfcI	CTRYAG	2 cut(s)	333, 559
SfuI	TTCGAA	1 cut(s)	950
SinI	GGWCC	6 cut(s)	20, 208, 460, 934, 1628, 2234
SmiMI	CAYNNNNRTG	2 cut(s)	493, 2507
SmlI	CTYRAG	2 cut(s)	491, 1814
SmoI	CTYRAG	2 cut(s)	491, 1814
SspI	AATATT	1 cut(s)	1982
SspMI	CTAG	7 cut(s)	624, 1296, 1527, 1922, 2231, 2414, 2597
StyD4I	CCNGG	2 cut(s)	345, 1609
StyI	CCWWGG	2 cut(s)	1602, 2230
TaaI	ACNGT	6 cut(s)	478, 862, 973, 995, 1228, 1459
TaiI	ACGT	5 cut(s)	301, 471, 1217, 1448, 2260
TaqI	TCGA	4 cut(s)	49, 95, 267, 950
TauI	GCSGC	3 cut(s)	1154, 1303, 1654
TfiI	GAWTC	5 cut(s)	383, 588, 605, 2072, 2127
Tru1I	TTAA	7 cut(s)	504, 740, 780, 2319, 2328, 2492, 2505
Tru9I	TTAA	7 cut(s)	504, 740, 780, 2319, 2328, 2492, 2505
TseFI	GTSAC	3 cut(s)	106, 187, 1533
Tsp45I	GTSAC	3 cut(s)	106, 187, 1533
TspDTI	ATGAA	7 cut(s)	335, 375, 822, 858, 1769, 2054, 2325
TspGWI	ACGGA	1 cut(s)	2139
VpaK11BI	GGWCC	6 cut(s)	20, 208, 460, 934, 1628, 2234
XagI	CCTNNNNNAGG	1 cut(s)	662
XapI	RAATTY	2 cut(s)	151, 2324
XceI	RCATGY	2 cut(s)	222, 2584
XcmI	CCANNNNNNNNNTGG	2 cut(s)	30, 244
XmaJI	CCTAGG	1 cut(s)	2230
XmnI	GAANNNNTTC	2 cut(s)	1971, 2076
XspI	CTAG	7 cut(s)	624, 1296, 1527, 1922, 2231, 2414, 2597
Zsp2I	ATGCAT	1 cut(s)	2504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.