Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0001973

Physical Location & Seq

Genomic Coordinates Forward (+)

4387044 .. 4391447

Gene Structure 4404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG054200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGACCATGAGCTGCTTTGGTCCATTGTTTCGTTGGAAGCCTCCTTCTCGACGCAAGGGAACGAAAGGCTCTAACCAGCCCAAGAGTCTTCCCTCGAAACAGAATGTCACCAGAAGCACACCAGCAGACGACTCTTATGGAGTTGCAGGAAATTCTGCTCTGACGATGGCGCTTAGGAAGAAGATCGTGACCTTCAGGGATGTCATGGACCTGCCAACATGTAATGCTTCTTCACCCATAAATCAGCTGGTGATGGGGTTGATGCTTGATCTCCAAAAGCTCTACCCTGAAATTGTACGTCGTAGTCAATTATCAGAAATGAAGGGAGCATCTACAGAAGAGACCCTGGCCTCCTTCTGCAATGCACTGAAATCTATTGGAGATTCATGGATGACAAACCATGACAGGTTGGACAAACTGAGATATGATATGCCATCATTCAAAGAGAATGCCAATTGGGACCAACACGTTGGAACCATGTTGGCAACACTTGAGTGCTTGATTAAGATGGCAAGGGACAAGTTTGATATGATGGACGAGGATGAGCAGAAGAGCAACTGCAGCCCTCGCGGTAACTCATTTGGGAGATTCTTAGGCGACACCGATTCAGAGAGTTACACCTCTAGCTGCCCTTCTCCAATCACACCATCCTCTGTCCTTCCTGAGGTGATAGATAGTGGCTCCCCCAAATCTCAAAGGAGATCGAAAGCTTCTTCCAGATCACCCGTTCTCTTGACTTTAAGAGTGCAGGCAGTGGGGAAACTCAACCCAATTGATGTTAAGCATTTGTCTCTTCACTTATCAAATGAAGGAGCCTCTGATAAAAGTAACAAATTGGTTGATGAACCATCAAGAGAGACAGTGGAAAGCAGCTCCGAGAAGTCATCAAAGGAAGAAAACAGATGTAGCAGCACAAGAGAGGACACAGCAGAGGTCCCAAATCCAAGTTTGAATGAGAATGATAGCAGAACTGTTATAATAGACAACAGAAACTGTGATGATGTTGGCATTTCAACCACAGACCCTGAAACTTTGGCAGTAGATATAACAGAATTGCCTCCACCCTCACCACCACCAAACCTCACAACAACAATACCTGTAACTCCACCACCACCACCATCACTACCCACATTGCAGCCAAAGGCTGCTGCGGCGCCTCCCTCACCGCCACCACCACCAACACTGCCTGTATCACCATCACTGCCCACGTTGCAGCCAACTGTTGCAGCACTACCGCCCCCGCCCCCGCCCCCGCCCCCACCACCAACATTAGCACCACTAAATGCAGCACCTGCTAGGCGGCCAGCACCACCTCCACCTAAGGCACTGCGATCAACAAAAGCTGCTCCACCACCATCACTACCCACATTGCAGCCAAAGGCTGCTGCGACACCCCCCTCACCGCCACTACCACCAACACTGCCTGTACCGCCATCACTGCCCACGTTGCAGCCAACTGTTGCAGCACCGCCACCGCCACCACCACCACCAACATTAACACCACTAAATGCAGCACCTGCTAGGCGGTCACCGCCACCTCCACCTAAGGTACTGGGATCAACAAAAGCTGCTCCACCACCGCCACCACCTCTGCCCATGGCACCAGGATCAACAGCAGCAGGTCCACCAACCCCACTACTGATGCCGGTTGCAACTGCATCTGCTCCACCACCCCCACCACCCTTGCTGCTTGCAAATGGAGCTGCCCCACCACCCATGGGGAGGCCTGCAAATGGAGCTGCTCCACCCCCACCTTCACCCATGGGGAGGCTGGCAAATGGAGCTGCTCCACCCCCACCTCCTGCACTTGGTGGAAGATCCTTACTTATGAAGAAATCAAATACTAAATTGAAGAGATCATCCCAAATGGGAAGTCTGTATCGGACTCTCAAGGGGAAGGTGGAAGGGTCAAGCTTGAATGGTAAATCATCCAATGGGAGAAAGGGTGGAGCAGCTGGGAGCAGCGCAGCAGGTGGTAAAGGAATGGCTGATGCTCTAGCAGAGATGACAAAGAGGTATTTATGTTTTTCCATAGGACCCTTTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231

Pfam Domains

Protein Families

No domains found.

Protein Analysis

682

Amino Acids

71.42

Weight (kDa)

9.59

Isoelectric Point (pI)

76.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11070 AT1G11070 AT1G11070 AT1G11070 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT4G04980 AT4G04980 AT4G04980
malus_domestica	MD05G1320300.v1.1 MD05G1320400.v1.1 MD05G1320600.v1.1 MD05G1320700.v1.1 MD05G1320900.v1.1 MD10G1299500.v1.1
prunus_persica	Prupe.4G041300_v2.0.a1 Prupe.4G041300_v2.0.a1
pyrus_communis	pycom05g29550 pycom05g29570
rosa_chinensis	RchiOBHm_Chr5g0007591 RchiOBHm_Chr5g0007601 RchiOBHm_Chr5g0021911 RchiOBHm_Chr7g0235111
rosa_laevigata	RLG00000013181 RLG00000031475
rosa_multiflora	Rmu_sc0015365.1_g000002 Rmu_sc0042291.1_g000002
rosa_roxburghii	Rroxscaffold_1G00068760 Rroxscaffold_1G00068770 Rroxscaffold_4G00304220
rosa_rugosa	Rorug04G0429100
rosa_samantha	Rh4DG240000 Rh5AG057100 Rh5AG057200 Rh5BG054200 Rh5CG064000 Rh5CG064100 Rh5DG053300 Rh6BG518400 Rh6CG523900
rosa_wichuraiana	Rw5G005350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	977
AarI	CACCTGC	3 cut(s)	1300, 1525, 1961
Acc36I	ACCTGC	5 cut(s)	219, 1300, 1525, 1610, 1961
AccB1I	GGYRCC	2 cut(s)	1153, 1600
AccII	CGCG	1 cut(s)	570
AclWI	GGATC	3 cut(s)	1564, 1615, 1812
AcoI	YGGCCR	1 cut(s)	1301
AcsI	RAATTY	1 cut(s)	151
AcuI	CTGAAG	1 cut(s)	178
AcyI	GRCGYC	1 cut(s)	1154
AdeI	CACNNNGTG	1 cut(s)	1811
AfaI	GTAC	3 cut(s)	297, 1428, 1551
AfiI	CCNNNNNNNGG	6 cut(s)	664, 1718, 1722, 1733, 1767, 1808
AflIII	ACRYGT	2 cut(s)	218, 466
AgsI	TTSAA	5 cut(s)	442, 952, 1014, 1852, 1918
AjnI	CCWGG	2 cut(s)	345, 1603
AleI	CACNNNNGTG	1 cut(s)	493
Alw26I	GTCTC	3 cut(s)	335, 795, 851
AlwI	GGATC	3 cut(s)	1564, 1615, 1812
AlwNI	CAGNNNCTG	4 cut(s)	993, 1025, 1292, 1517
AoxI	GGCC	3 cut(s)	348, 1301, 1724
ApoI	RAATTY	1 cut(s)	151
ArsI	GACNNNNNNTTYG	2 cut(s)	1858, 1890
AspLEI	GCGC	3 cut(s)	172, 1156, 1967
AspS9I	GGNCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
AvaII	GGWCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
AxyI	CCTNAGG	3 cut(s)	663, 1320, 1545
BanI	GGYRCC	2 cut(s)	1153, 1600
BarI	GAAGNNNNNNTAC	2 cut(s)	214, 246
BbsI	GAAGAC	1 cut(s)	80
BciT130I	CCWGG	2 cut(s)	347, 1605
BcoDI	GTCTC	3 cut(s)	335, 795, 851
BfaI	CTAG	4 cut(s)	624, 1296, 1521, 1997
BfmI	CTRYAG	2 cut(s)	333, 559
BfoI	RGCGCY	2 cut(s)	173, 1157
BfuAI	ACCTGC	5 cut(s)	219, 1300, 1525, 1610, 1961
Bme1390I	CCNGG	2 cut(s)	347, 1605
Bme18I	GGWCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
BmgT120I	GGNCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
BmiI	GGNNCC	8 cut(s)	461, 475, 682, 814, 936, 1155, 1602, 2038
BmrFI	CCNGG	2 cut(s)	347, 1605
BmrI	ACTGGG	1 cut(s)	1562
BmsI	GCATC	5 cut(s)	252, 338, 1632, 1667, 1981
BmuI	ACTGGG	1 cut(s)	1562
BpiI	GAAGAC	1 cut(s)	80
Bpu10I	CCTNAGC	1 cut(s)	173
BpuEI	CTTGAG	2 cut(s)	512, 1874
BsaHI	GRCGYC	1 cut(s)	1154
BsaI	GGTCTC	1 cut(s)	335
BsaJI	CCNNGG	4 cut(s)	345, 1596, 1716, 1761
BsaXI	ACNNNNNCTCC	2 cut(s)	1930, 1960
Bsc4I	CCNNNNNNNGG	6 cut(s)	664, 1718, 1722, 1733, 1767, 1808
Bse118I	RCCGGY	1 cut(s)	1645
Bse1I	ACTGG	1 cut(s)	1557
Bse21I	CCTNAGG	3 cut(s)	663, 1320, 1545
Bse3DI	GCAATG	3 cut(s)	367, 1130, 1367
BseBI	CCWGG	2 cut(s)	347, 1605
BseDI	CCNNGG	4 cut(s)	345, 1596, 1716, 1761
BseGI	GGATG	6 cut(s)	205, 396, 547, 647, 1859, 1928
BseLI	CCNNNNNNNGG	6 cut(s)	664, 1718, 1722, 1733, 1767, 1808
BseMI	GCAATG	3 cut(s)	367, 1130, 1367
BseMII	CTCAG	2 cut(s)	410, 654
BseNI	ACTGG	1 cut(s)	1557
BseYI	CCCAGC	1 cut(s)	1955
BsgI	GTGCAG	2 cut(s)	767, 1788
Bsh1236I	CGCG	1 cut(s)	570
BshFI	GGCC	3 cut(s)	350, 1303, 1726
BshNI	GGYRCC	2 cut(s)	1153, 1600
BsiSI	CCGG	1 cut(s)	1646
BslFI	GGGAC	3 cut(s)	473, 530, 920
BslI	CCNNNNNNNGG	6 cut(s)	664, 1718, 1722, 1733, 1767, 1808
BsmAI	GTCTC	3 cut(s)	335, 795, 851
BsmFI	GGGAC	3 cut(s)	473, 530, 920
BsmI	GAATGC	1 cut(s)	454
BsnI	GGCC	3 cut(s)	350, 1303, 1726
Bso31I	GGTCTC	1 cut(s)	335
Bsp143I	GATC	9 cut(s)	183, 268, 701, 719, 1331, 1556, 1607, 1817, 1856
Bsp19I	CCATGG	3 cut(s)	1596, 1716, 1761
BspANI	GGCC	3 cut(s)	350, 1303, 1726
BspCNI	CTCAG	2 cut(s)	411, 655
BspFNI	CGCG	1 cut(s)	570
BspLI	GGNNCC	8 cut(s)	461, 475, 682, 814, 936, 1155, 1602, 2038
BspMAI	CTGCAG	1 cut(s)	563
BspMI	ACCTGC	5 cut(s)	219, 1300, 1525, 1610, 1961
BspPI	GGATC	3 cut(s)	1564, 1615, 1812
BspQI	GCTCTTC	1 cut(s)	545
BspT107I	GGYRCC	2 cut(s)	1153, 1600
BspTNI	GGTCTC	1 cut(s)	335
BsrDI	GCAATG	3 cut(s)	367, 1130, 1367
BsrFI	RCCGGY	1 cut(s)	1645
BsrI	ACTGG	1 cut(s)	1557
BssAI	RCCGGY	1 cut(s)	1645
BssECI	CCNNGG	4 cut(s)	345, 1596, 1716, 1761
BssMI	GATC	9 cut(s)	183, 268, 701, 719, 1331, 1556, 1607, 1817, 1856
BssNI	GRCGYC	1 cut(s)	1154
BssT1I	CCWWGG	3 cut(s)	1596, 1716, 1761
Bst2UI	CCWGG	2 cut(s)	347, 1605
Bst4CI	ACNGT	5 cut(s)	862, 973, 995, 1222, 1459
Bst6I	CTCTTC	4 cut(s)	333, 545, 798, 1847
BstACI	GRCGYC	1 cut(s)	1154
BstAPI	GCANNNNNTGC	2 cut(s)	1292, 1517
BstC8I	GCNNGC	5 cut(s)	750, 1305, 1692, 1728, 1773
BstDEI	CTNAG	6 cut(s)	173, 419, 592, 663, 1320, 1545
BstDSI	CCRYGG	3 cut(s)	1596, 1716, 1761
BstEII	GGTNACC	1 cut(s)	1527
BstENI	CCTNNNNNAGG	1 cut(s)	662
BstF5I	GGATG	6 cut(s)	205, 396, 547, 647, 1859, 1928
BstFNI	CGCG	1 cut(s)	570
BstH2I	RGCGCY	2 cut(s)	173, 1157
BstHHI	GCGC	3 cut(s)	172, 1156, 1967
BstKTI	GATC	9 cut(s)	186, 271, 704, 722, 1334, 1559, 1610, 1820, 1859
BstMAI	GTCTC	3 cut(s)	335, 795, 851
BstMBI	GATC	9 cut(s)	183, 268, 701, 719, 1331, 1556, 1607, 1817, 1856
BstNI	CCWGG	2 cut(s)	347, 1605
BstNSI	RCATGY	1 cut(s)	222
BstPI	GGTNACC	1 cut(s)	1527
BstSCI	CCNGG	2 cut(s)	345, 1603
BstSFI	CTRYAG	2 cut(s)	333, 559
BstUI	CGCG	1 cut(s)	570
BstV2I	GAAGAC	1 cut(s)	80
BstX2I	RGATCY	1 cut(s)	1817
BstXI	CCANNNNNNTGG	1 cut(s)	470
BstYI	RGATCY	1 cut(s)	1817
Bsu36I	CCTNAGG	3 cut(s)	663, 1320, 1545
BsuRI	GGCC	3 cut(s)	350, 1303, 1726
BtgI	CCRYGG	3 cut(s)	1596, 1716, 1761
BtsCI	GGATG	6 cut(s)	205, 396, 547, 647, 1859, 1928
BtsI	GCAGTG	6 cut(s)	759, 1181, 1199, 1325, 1418, 1436
BtsIMutI	CAGTG	8 cut(s)	365, 759, 867, 1181, 1199, 1325, 1418, 1436
BveI	ACCTGC	5 cut(s)	219, 1300, 1525, 1610, 1961
Cac8I	GCNNGC	5 cut(s)	750, 1305, 1692, 1728, 1773
CaiI	CAGNNNCTG	4 cut(s)	993, 1025, 1292, 1517
CfoI	GCGC	3 cut(s)	172, 1156, 1967
Cfr10I	RCCGGY	1 cut(s)	1645
Cfr13I	GGNCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
CseI	GACGC	1 cut(s)	60
Csp6I	GTAC	3 cut(s)	296, 1427, 1550
CspCI	CAANNNNNGTGG	2 cut(s)	1665, 1700
CviAII	CATG	9 cut(s)	7, 205, 219, 387, 401, 478, 1597, 1717, 1762
CviQI	GTAC	3 cut(s)	296, 1427, 1550
DdeI	CTNAG	6 cut(s)	173, 419, 592, 663, 1320, 1545
DinI	GGCGCC	1 cut(s)	1155
DpnI	GATC	9 cut(s)	185, 270, 703, 721, 1333, 1558, 1609, 1819, 1858
DpnII	GATC	9 cut(s)	183, 268, 701, 719, 1331, 1556, 1607, 1817, 1856
DraIII	CACNNNGTG	1 cut(s)	1811
EaeI	YGGCCR	1 cut(s)	1301
Eam1104I	CTCTTC	4 cut(s)	333, 545, 798, 1847
EarI	CTCTTC	4 cut(s)	333, 545, 798, 1847
Eco130I	CCWWGG	3 cut(s)	1596, 1716, 1761
Eco147I	AGGCCT	1 cut(s)	1726
Eco31I	GGTCTC	1 cut(s)	335
Eco47I	GGWCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
Eco57I	CTGAAG	1 cut(s)	178
Eco81I	CCTNAGG	3 cut(s)	663, 1320, 1545
Eco91I	GGTNACC	1 cut(s)	1527
EcoNI	CCTNNNNNAGG	1 cut(s)	662
EcoO109I	RGGNCCY	2 cut(s)	934, 2036
EcoO65I	GGTNACC	1 cut(s)	1527
EcoRII	CCWGG	2 cut(s)	345, 1603
EcoT14I	CCWWGG	3 cut(s)	1596, 1716, 1761
EgeI	GGCGCC	1 cut(s)	1155
EheI	GGCGCC	1 cut(s)	1155
ErhI	CCWWGG	3 cut(s)	1596, 1716, 1761
FaeI	CATG	9 cut(s)	10, 208, 222, 390, 404, 481, 1600, 1720, 1765
FaqI	GGGAC	3 cut(s)	473, 530, 920
FatI	CATG	9 cut(s)	6, 204, 218, 386, 400, 477, 1596, 1716, 1761
FauI	CCCGC	3 cut(s)	1248, 1254, 1260
FokI	GGATG	6 cut(s)	212, 403, 554, 634, 1846, 1915
FspBI	CTAG	4 cut(s)	624, 1296, 1521, 1997
GlaI	GCGC	3 cut(s)	171, 1155, 1966
GsaI	CCCAGC	1 cut(s)	1959
HaeII	RGCGCY	2 cut(s)	173, 1157
HaeIII	GGCC	3 cut(s)	350, 1303, 1726
HapII	CCGG	1 cut(s)	1646
HgaI	GACGC	1 cut(s)	60
HhaI	GCGC	3 cut(s)	172, 1156, 1967
Hin1I	GRCGYC	1 cut(s)	1154
Hin1II	CATG	9 cut(s)	10, 208, 222, 390, 404, 481, 1600, 1720, 1765
Hin6I	GCGC	3 cut(s)	170, 1154, 1965
HinP1I	GCGC	3 cut(s)	170, 1154, 1965
HindIII	AAGCTT	2 cut(s)	708, 1912
HinfI	GANTC	6 cut(s)	85, 131, 383, 588, 605, 1885
HpaII	CCGG	1 cut(s)	1646
Hpy166II	GTNNAC	1 cut(s)	1625
Hpy188I	TCNGA	6 cut(s)	162, 316, 610, 820, 877, 1884
Hpy188III	TCNNGA	6 cut(s)	48, 187, 662, 717, 733, 852
Hpy8I	GTNNAC	1 cut(s)	1625
Hpy99I	CGWCG	2 cut(s)	54, 303
HpyCH4III	ACNGT	5 cut(s)	862, 973, 995, 1222, 1459
HpyCH4IV	ACGT	4 cut(s)	298, 468, 1208, 1445
HpyF3I	CTNAG	6 cut(s)	173, 419, 592, 663, 1320, 1545
HpySE526I	ACGT	4 cut(s)	298, 468, 1208, 1445
Hsp92I	GRCGYC	1 cut(s)	1154
Hsp92II	CATG	9 cut(s)	10, 208, 222, 390, 404, 481, 1600, 1720, 1765
HspAI	GCGC	3 cut(s)	170, 1154, 1965
KasI	GGCGCC	1 cut(s)	1153
Kzo9I	GATC	9 cut(s)	183, 268, 701, 719, 1331, 1556, 1607, 1817, 1856
LguI	GCTCTTC	1 cut(s)	545
LweI	GCATC	5 cut(s)	252, 338, 1632, 1667, 1981
MaeI	CTAG	4 cut(s)	624, 1296, 1521, 1997
MaeII	ACGT	4 cut(s)	298, 468, 1208, 1445
MaeIII	GTNAC	7 cut(s)	106, 187, 572, 614, 827, 1099, 1527
MalI	GATC	9 cut(s)	185, 270, 703, 721, 1333, 1558, 1609, 1819, 1858
MboI	GATC	9 cut(s)	183, 268, 701, 719, 1331, 1556, 1607, 1817, 1856
MfeI	CAATTG	2 cut(s)	454, 771
MflI	RGATCY	1 cut(s)	1817
MluCI	AATT	8 cut(s)	151, 291, 308, 454, 771, 833, 1052, 1847
Mly113I	GGCGCC	1 cut(s)	1154
MlyI	GAGTC	3 cut(s)	94, 125, 1879
MmeI	TCCRAC	3 cut(s)	14, 390, 451
MseI	TTAA	4 cut(s)	504, 740, 780, 1496
MslI	CAYNNNNRTG	1 cut(s)	493
MspA1I	CMGCKG	2 cut(s)	247, 1955
MspI	CCGG	1 cut(s)	1646
MspR9I	CCNGG	2 cut(s)	347, 1605
MunI	CAATTG	2 cut(s)	454, 771
Mva1269I	GAATGC	1 cut(s)	454
MvaI	CCWGG	2 cut(s)	347, 1605
MvnI	CGCG	1 cut(s)	570
NarI	GGCGCC	1 cut(s)	1154
NcoI	CCATGG	3 cut(s)	1596, 1716, 1761
NdeII	GATC	9 cut(s)	183, 268, 701, 719, 1331, 1556, 1607, 1817, 1856
NlaIII	CATG	9 cut(s)	10, 208, 222, 390, 404, 481, 1600, 1720, 1765
NlaIV	GGNNCC	8 cut(s)	461, 475, 682, 814, 936, 1155, 1602, 2038
NmuCI	GTSAC	3 cut(s)	106, 187, 1527
NspI	RCATGY	1 cut(s)	222
OliI	CACNNNNGTG	1 cut(s)	493
PaqCI	CACCTGC	3 cut(s)	1300, 1525, 1961
PceI	AGGCCT	1 cut(s)	1726
PciI	ACATGT	1 cut(s)	218
PciSI	GCTCTTC	1 cut(s)	545
PctI	GAATGC	1 cut(s)	454
PfeI	GAWTC	3 cut(s)	383, 588, 605
PleI	GAGTC	3 cut(s)	93, 125, 1879
PluTI	GGCGCC	1 cut(s)	1157
PpsI	GAGTC	3 cut(s)	93, 125, 1879
PpuMI	RGGWCCY	2 cut(s)	934, 2036
PscI	ACATGT	1 cut(s)	218
PsiI	TTATAA	1 cut(s)	977
Psp5II	RGGWCCY	2 cut(s)	934, 2036
Psp6I	CCWGG	2 cut(s)	345, 1603
PspEI	GGTNACC	1 cut(s)	1527
PspFI	CCCAGC	1 cut(s)	1955
PspGI	CCWGG	2 cut(s)	345, 1603
PspN4I	GGNNCC	8 cut(s)	461, 475, 682, 814, 936, 1155, 1602, 2038
PspPI	GGNCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
PspPPI	RGGWCCY	2 cut(s)	934, 2036
PstI	CTGCAG	1 cut(s)	563
PstNI	CAGNNNCTG	4 cut(s)	993, 1025, 1292, 1517
PsuI	RGATCY	1 cut(s)	1817
PvuII	CAGCTG	2 cut(s)	247, 1955
RsaI	GTAC	3 cut(s)	297, 1428, 1551
RsaNI	GTAC	3 cut(s)	296, 1427, 1550
RseI	CAYNNNNRTG	1 cut(s)	493
SapI	GCTCTTC	1 cut(s)	545
SaqAI	TTAA	4 cut(s)	504, 740, 780, 1496
Sau3AI	GATC	9 cut(s)	183, 268, 701, 719, 1331, 1556, 1607, 1817, 1856
Sau96I	GGNCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
SchI	GAGTC	3 cut(s)	94, 125, 1879
ScrFI	CCNGG	2 cut(s)	347, 1605
SfaNI	GCATC	5 cut(s)	252, 338, 1632, 1667, 1981
SfcI	CTRYAG	2 cut(s)	333, 559
SfoI	GGCGCC	1 cut(s)	1155
SinI	GGWCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
SmiMI	CAYNNNNRTG	1 cut(s)	493
SmlI	CTYRAG	2 cut(s)	491, 1889
SmoI	CTYRAG	2 cut(s)	491, 1889
Sse9I	AATT	8 cut(s)	151, 291, 308, 454, 771, 833, 1052, 1847
SseBI	AGGCCT	1 cut(s)	1726
SspDI	GGCGCC	1 cut(s)	1153
SspMI	CTAG	4 cut(s)	624, 1296, 1521, 1997
StuI	AGGCCT	1 cut(s)	1726
StyD4I	CCNGG	2 cut(s)	345, 1603
StyI	CCWWGG	3 cut(s)	1596, 1716, 1761
TaaI	ACNGT	5 cut(s)	862, 973, 995, 1222, 1459
TaiI	ACGT	4 cut(s)	301, 471, 1211, 1448
TaqI	TCGA	3 cut(s)	49, 95, 704
TasI	AATT	8 cut(s)	151, 291, 308, 454, 771, 833, 1052, 1847
TauI	GCSGC	2 cut(s)	1154, 1303
TfiI	GAWTC	3 cut(s)	383, 588, 605
Tru1I	TTAA	4 cut(s)	504, 740, 780, 1496
Tru9I	TTAA	4 cut(s)	504, 740, 780, 1496
TscAI	CASTG	8 cut(s)	372, 759, 867, 1188, 1206, 1332, 1425, 1443
TseFI	GTSAC	3 cut(s)	106, 187, 1527
Tsp45I	GTSAC	3 cut(s)	106, 187, 1527
TspDTI	ATGAA	6 cut(s)	335, 375, 822, 858, 1844, 2033
TspRI	CASTG	8 cut(s)	372, 759, 867, 1188, 1206, 1332, 1425, 1443
VpaK11BI	GGWCC	6 cut(s)	20, 208, 460, 934, 1622, 2036
XagI	CCTNNNNNAGG	1 cut(s)	662
XapI	RAATTY	1 cut(s)	151
XceI	RCATGY	1 cut(s)	222
XcmI	CCANNNNNNNNNTGG	3 cut(s)	30, 244, 1768
XspI	CTAG	4 cut(s)	624, 1296, 1521, 1997

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.