At4g04980-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11070 AT1G11070 AT1G11070 AT1G11070 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT1G61080 AT4G04980 AT4G04980 AT4G04980 |
| malus_domestica | MD05G1320300.v1.1 MD05G1320400.v1.1 MD05G1320600.v1.1 MD05G1320700.v1.1 MD05G1320900.v1.1 MD10G1299500.v1.1 |
| prunus_persica | Prupe.4G041300_v2.0.a1 Prupe.4G041300_v2.0.a1 |
| pyrus_communis | pycom05g29550 pycom05g29570 |
| rosa_chinensis | RchiOBHm_Chr5g0007591 RchiOBHm_Chr5g0007601 RchiOBHm_Chr5g0021911 RchiOBHm_Chr7g0235111 |
| rosa_laevigata | RLG00000013181 RLG00000031475 |
| rosa_multiflora | Rmu_sc0015365.1_g000002 Rmu_sc0042291.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00068760 Rroxscaffold_1G00068770 Rroxscaffold_4G00304220 |
| rosa_rugosa | Rorug04G0429100 |
| rosa_samantha | Rh4DG240000 Rh5AG057100 Rh5AG057200 Rh5BG054200 Rh5CG064000 Rh5CG064100 Rh5DG053300 Rh6BG518400 Rh6CG523900 |
| rosa_wichuraiana | Rw5G005350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 273 |
| AclI | AACGTT | 1 cut(s) | 163 |
| AcsI | RAATTY | 1 cut(s) | 230 |
| AgsI | TTSAA | 4 cut(s) | 29, 161, 262, 445 |
| AluBI | AGCT | 2 cut(s) | 319, 506 |
| AluI | AGCT | 2 cut(s) | 319, 506 |
| Aor13HI | TCCGGA | 1 cut(s) | 273 |
| AoxI | GGCC | 1 cut(s) | 348 |
| ApeKI | GCWGC | 2 cut(s) | 65, 309 |
| ApoI | RAATTY | 1 cut(s) | 230 |
| AspS9I | GGNCC | 1 cut(s) | 140 |
| AsuHPI | GGTGA | 1 cut(s) | 163 |
| AvaII | GGWCC | 1 cut(s) | 140 |
| AxyI | CCTNAGG | 1 cut(s) | 304 |
| BbvI | GCAGC | 2 cut(s) | 77, 296 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 461, 495 |
| BclI | TGATCA | 1 cut(s) | 99 |
| BfaI | CTAG | 2 cut(s) | 137, 503 |
| BfmI | CTRYAG | 1 cut(s) | 8 |
| BisI | GCNGC | 2 cut(s) | 66, 310 |
| BlsI | GCNGC | 2 cut(s) | 67, 311 |
| Bme18I | GGWCC | 1 cut(s) | 140 |
| BmgT120I | GGNCC | 1 cut(s) | 140 |
| BmiI | GGNNCC | 2 cut(s) | 132, 376 |
| BpmI | CTGGAG | 1 cut(s) | 221 |
| BsaWI | WCCGGW | 1 cut(s) | 273 |
| Bse1I | ACTGG | 3 cut(s) | 204, 351, 376 |
| Bse21I | CCTNAGG | 1 cut(s) | 304 |
| Bse3DI | GCAATG | 2 cut(s) | 102, 294 |
| BseAI | TCCGGA | 1 cut(s) | 273 |
| BseGI | GGATG | 2 cut(s) | 270, 301 |
| BseMI | GCAATG | 2 cut(s) | 102, 294 |
| BseMII | CTCAG | 1 cut(s) | 318 |
| BseNI | ACTGG | 3 cut(s) | 204, 351, 376 |
| BseXI | GCAGC | 2 cut(s) | 77, 296 |
| BshFI | GGCC | 1 cut(s) | 350 |
| BsiSI | CCGG | 1 cut(s) | 274 |
| BsnI | GGCC | 1 cut(s) | 350 |
| Bsp13I | TCCGGA | 1 cut(s) | 273 |
| Bsp143I | GATC | 3 cut(s) | 99, 177, 475 |
| BspANI | GGCC | 1 cut(s) | 350 |
| BspCNI | CTCAG | 1 cut(s) | 317 |
| BspEI | TCCGGA | 1 cut(s) | 273 |
| BspLI | GGNNCC | 2 cut(s) | 132, 376 |
| BspMAI | CTGCAG | 1 cut(s) | 12 |
| BsrDI | GCAATG | 2 cut(s) | 102, 294 |
| BsrI | ACTGG | 3 cut(s) | 204, 351, 376 |
| BssMI | GATC | 3 cut(s) | 99, 177, 475 |
| BstC8I | GCNNGC | 1 cut(s) | 321 |
| BstDEI | CTNAG | 1 cut(s) | 304 |
| BstF5I | GGATG | 2 cut(s) | 270, 301 |
| BstKTI | GATC | 3 cut(s) | 102, 180, 478 |
| BstMBI | GATC | 3 cut(s) | 99, 177, 475 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 71 |
| BstNSI | RCATGY | 1 cut(s) | 490 |
| BstSFI | CTRYAG | 1 cut(s) | 8 |
| BstV1I | GCAGC | 2 cut(s) | 77, 296 |
| Bsu36I | CCTNAGG | 1 cut(s) | 304 |
| BsuRI | GGCC | 1 cut(s) | 350 |
| BtsCI | GGATG | 2 cut(s) | 270, 301 |
| BtsIMutI | CAGTG | 3 cut(s) | 102, 358, 535 |
| Cac8I | GCNNGC | 1 cut(s) | 321 |
| Cfr13I | GGNCC | 1 cut(s) | 140 |
| CviAII | CATG | 2 cut(s) | 313, 487 |
| CviJI | RGCY | 6 cut(s) | 131, 309, 319, 350, 428, 506 |
| CviKI_1 | RGCY | 6 cut(s) | 131, 309, 319, 350, 428, 506 |
| DdeI | CTNAG | 1 cut(s) | 304 |
| DpnI | GATC | 3 cut(s) | 101, 179, 477 |
| DpnII | GATC | 3 cut(s) | 99, 177, 475 |
| Eco47I | GGWCC | 1 cut(s) | 140 |
| Eco81I | CCTNAGG | 1 cut(s) | 304 |
| EcoO109I | RGGNCCY | 1 cut(s) | 140 |
| EcoT22I | ATGCAT | 1 cut(s) | 410 |
| FaeI | CATG | 2 cut(s) | 316, 490 |
| FaiI | YATR | 4 cut(s) | 314, 406, 453, 488 |
| FatI | CATG | 2 cut(s) | 312, 486 |
| FbaI | TGATCA | 1 cut(s) | 99 |
| Fnu4HI | GCNGC | 2 cut(s) | 66, 310 |
| FokI | GGATG | 2 cut(s) | 257, 308 |
| Fsp4HI | GCNGC | 2 cut(s) | 66, 310 |
| FspBI | CTAG | 2 cut(s) | 137, 503 |
| GluI | GCNGC | 2 cut(s) | 66, 310 |
| GsuI | CTGGAG | 1 cut(s) | 221 |
| HaeIII | GGCC | 1 cut(s) | 350 |
| HapII | CCGG | 1 cut(s) | 274 |
| Hin1II | CATG | 2 cut(s) | 316, 490 |
| HinfI | GANTC | 3 cut(s) | 33, 238, 518 |
| HpaII | CCGG | 1 cut(s) | 274 |
| HphI | GGTGA | 1 cut(s) | 163 |
| Hpy166II | GTNNAC | 1 cut(s) | 467 |
| Hpy188I | TCNGA | 1 cut(s) | 523 |
| Hpy188III | TCNNGA | 1 cut(s) | 274 |
| Hpy8I | GTNNAC | 1 cut(s) | 467 |
| HpyAV | CCTTC | 2 cut(s) | 23, 451 |
| HpyCH4IV | ACGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 4 cut(s) | 10, 95, 312, 408 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 71 |
| HpyF3I | CTNAG | 1 cut(s) | 304 |
| HpySE526I | ACGT | 1 cut(s) | 163 |
| Hsp92II | CATG | 2 cut(s) | 316, 490 |
| Kpn2I | TCCGGA | 1 cut(s) | 273 |
| Ksp22I | TGATCA | 1 cut(s) | 99 |
| Kzo9I | GATC | 3 cut(s) | 99, 177, 475 |
| LmnI | GCTCC | 3 cut(s) | 136, 202, 316 |
| LpnPI | CCDG | 7 cut(s) | 185, 287, 291, 305, 357, 364, 447 |
| Lsp1109I | GCAGC | 2 cut(s) | 77, 296 |
| MaeI | CTAG | 2 cut(s) | 137, 503 |
| MaeII | ACGT | 1 cut(s) | 163 |
| MalI | GATC | 3 cut(s) | 101, 179, 477 |
| MboI | GATC | 3 cut(s) | 99, 177, 475 |
| MboII | GAAGA | 2 cut(s) | 230, 348 |
| MfeI | CAATTG | 1 cut(s) | 115 |
| MluCI | AATT | 5 cut(s) | 115, 222, 230, 395, 513 |
| MlyI | GAGTC | 2 cut(s) | 247, 527 |
| MnlI | CCTC | 7 cut(s) | 54, 121, 153, 278, 313, 352, 417 |
| Mph1103I | ATGCAT | 1 cut(s) | 410 |
| MroI | TCCGGA | 1 cut(s) | 273 |
| MseI | TTAA | 4 cut(s) | 225, 234, 398, 411 |
| MslI | CAYNNNNRTG | 1 cut(s) | 413 |
| MspI | CCGG | 1 cut(s) | 274 |
| MunI | CAATTG | 1 cut(s) | 115 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 71 |
| NdeII | GATC | 3 cut(s) | 99, 177, 475 |
| NlaIII | CATG | 2 cut(s) | 316, 490 |
| NlaIV | GGNNCC | 2 cut(s) | 132, 376 |
| NsiI | ATGCAT | 1 cut(s) | 410 |
| NspI | RCATGY | 1 cut(s) | 490 |
| PfeI | GAWTC | 1 cut(s) | 33 |
| PkrI | GCNGC | 2 cut(s) | 67, 311 |
| PleI | GAGTC | 2 cut(s) | 246, 526 |
| PpsI | GAGTC | 2 cut(s) | 246, 526 |
| PpuMI | RGGWCCY | 1 cut(s) | 140 |
| Psp1406I | AACGTT | 1 cut(s) | 163 |
| Psp5II | RGGWCCY | 1 cut(s) | 140 |
| PspN4I | GGNNCC | 2 cut(s) | 132, 376 |
| PspPI | GGNCC | 1 cut(s) | 140 |
| PspPPI | RGGWCCY | 1 cut(s) | 140 |
| PstI | CTGCAG | 1 cut(s) | 12 |
| RseI | CAYNNNNRTG | 1 cut(s) | 413 |
| SaqAI | TTAA | 4 cut(s) | 225, 234, 398, 411 |
| SatI | GCNGC | 2 cut(s) | 66, 310 |
| Sau3AI | GATC | 3 cut(s) | 99, 177, 475 |
| Sau96I | GGNCC | 1 cut(s) | 140 |
| SchI | GAGTC | 2 cut(s) | 247, 527 |
| SetI | ASST | 8 cut(s) | 15, 26, 142, 166, 321, 450, 458, 508 |
| SfcI | CTRYAG | 1 cut(s) | 8 |
| SinI | GGWCC | 1 cut(s) | 140 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 413 |
| Sse9I | AATT | 5 cut(s) | 115, 222, 230, 395, 513 |
| SspMI | CTAG | 2 cut(s) | 137, 503 |
| TaiI | ACGT | 1 cut(s) | 166 |
| TasI | AATT | 5 cut(s) | 115, 222, 230, 395, 513 |
| TfiI | GAWTC | 1 cut(s) | 33 |
| Tru1I | TTAA | 4 cut(s) | 225, 234, 398, 411 |
| Tru9I | TTAA | 4 cut(s) | 225, 234, 398, 411 |
| TscAI | CASTG | 2 cut(s) | 109, 358 |
| TseI | GCWGC | 2 cut(s) | 65, 309 |
| TspDTI | ATGAA | 2 cut(s) | 17, 231 |
| TspRI | CASTG | 2 cut(s) | 109, 358 |
| VpaK11BI | GGWCC | 1 cut(s) | 140 |
| XapI | RAATTY | 1 cut(s) | 230 |
| XceI | RCATGY | 1 cut(s) | 490 |
| XspI | CTAG | 2 cut(s) | 137, 503 |
| Zsp2I | ATGCAT | 1 cut(s) | 410 |