MD11G1002300.v1.1

YTH domain family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0001378
Physical Location & Seq
Reverse (-)
212449 .. 216537
4089 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1002300.v1.1.491

Sequence Viewer

Length: 2031 bp
ATGGCGACCACCGTTTCCCCACCTGCGGATCAAGCTGCAGACTTGCTGCAGAATTTGGCCTTGGAATCTCAGACCAAGGGTCCTGATGATATCCCTGACCCTGCCACTGCCAGGAAGCCCGTTGTCGTGACTTCAAAGAGCAAGTCTTATCATCGGTCTACGGCCCCATTGCGAAAGAATTTTATGGATCCATCTGCGTGCTATCTACCTAATGGTTACACATCTTCTGCCTATTACTATGGAGGCTATGATGGGACTGGAAATGAGTGGGGCGGGATTTCAAGTTATGTTAATCCAAATGGAAACGATGTGAATTCTGCTGTCTATGGGGATAATGGTTCTTTTATGTATCATCATGGTTATGGTTATGCACCCTACAGCACATATTCAACATCGGGGTCTCCAGTTTCAACTGTGGGAAGTGATGGTCAGCTATATGGACCTCAGCAGTACCAATATCCTCCCTATTTTAAGCAGCTGAAACCTAACAGTGGCTCACACACCCCTAATTCAGCTGTTCCTTCCCAGGGGGCTGTCTCTACCGCAAAGGATGCTGGCCACAAGCCCTCACTTGTAGGAACAGCTAATGGGAATCCCAATGGTGTTCTGGCCAGTGTGTGTAAGAAGGGAAATAGTCCTTCTGATTTCTCAAAACCAACATATAAAAACTCATCACTGAATCTAAAGGGTTCCTGCAACGGGTACTATGATGCAATATATGGTTTTGATGGGTTGGTAACTCCTACCCCATGGTTTGAACGGCCAATGTATTCAAATGGACTGGGTAAACCAATGACTGGAAACGCAGTCAACAGAACTCCATCTTCCAAGAATCATACTTCCCGATCAAACTCTCAATTCATGGATTTGTACCACACGAGGATGGGATACGGTATGGATGCAGCTAACGGACTTGTGAATGGGATGTATACCAATGAATTGTATGGTCATTATTGGAACCCAATTAGACTTGGTATGGGATTTGGATCCAGTGGTTTTGGTATGCATAGAAATGGAAGAGGGTGGACTGCTCTTCAAAACAAGTATAAAACCAGGGGGCGAGACAGTTCCTTCCGCTTTGGTAACCAGGACGTAGAAGGCTTGGATGAGTTGAACAAGGGACCTAGAGTTAAAAGTTTAAAAAATCAAAAGGGAAATTCACCTGTTGCTGTAGCAGTTAAGGGGAACAATATGCTGTTGAATAAAGTTGATGATGAGAAGGATGCAGTTAGCATAATGGCAGAGCAGGAGCAGTACATCGGAACAGATATCTGTGATCATTATGCTGATGCTAAGTTCTTCATTATTAAGTCATATAGTGAGGATGATGTTCATAAGAGTGTAAAGTATAATGTTTGGGCCAGCACACCAAATGGAAACAATAAACTTCATGCAGCATACCAAGAGGCTCAGGAGAAGTCAGGTGGCTGCCCCGTGTTTCTGTTTTTCTCGGTGAATGCCAGTGGCCAATTTGTTGGCCTAGCGGAGATGGTGGGGCTGGTAGATTTTAACAAGAATGTGGAATATTGGCAACAAGACAAGTGGACTGGCTATTTTCCAGTTAAGTGGCACATTGTAAAGGATGTACCCAACAGTTTGCTAAAGCACATTACCCTAGAGAACAATGAAAACAAACCTGTCACTAATAGCAGGGACACTCAAGAGGTCAAGCCAGAGCAGGGGCTTAAAATGATCAAGATGTTCAAGGATCATTCCAGTAAAACAAGCCTTTTGGATGATTTTGAGTTCTATGAAGCTCGACAGAAGACAATTCAGGAAAATAAAGGAAAGCAGCAGATCCGGAAACAGATATTGGATGGGAAGCCAAATGATGGAAGAAATGATGGGGCAAATGAGGCGCTCAAATCCTTGGAATCATTTGGAACTGCCTTAGATTTGATTAGGGAACCGACACCAAGTGCTGAGACCGGTGAGGAACTGAAGTTGTCGGAGAATGGATCGGTTGCTGAAACAGGAGGAAATCCGGAGGCTCCAGAACTAGCTGTGACCGAGATGATTGTAACAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

677

Amino Acids

74.08

Weight (kDa)

6.95

Isoelectric Point (pI)

30.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 431 - 569 6.9e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 31
Acc36I ACCTGC 1 cut(s) 31
AccB7I CCANNNNNTGG 2 cut(s) 797, 1832
AccI GTMKAC 2 cut(s) 158, 929
AccIII TCCGGA 2 cut(s) 1800, 1984
AciI CCGC 5 cut(s) 26, 273, 543, 1075, 1484
AclWI GGATC 8 cut(s) 36, 182, 195, 981, 994, 1716, 1792, 1966
AcoI YGGCCR 4 cut(s) 556, 609, 761, 1465
AcsI RAATTY 4 cut(s) 52, 178, 313, 1156
AcuI CTGAAG 1 cut(s) 1961
AdeI CACNNNGTG 1 cut(s) 1919
AfaI GTAC 5 cut(s) 452, 704, 872, 1256, 1587
AfiI CCNNNNNNNGG 8 cut(s) 25, 111, 491, 527, 699, 797, 1679, 1832
AgeI ACCGGT 1 cut(s) 1928
AhdI GACNNNNNGTC 1 cut(s) 78
AjnI CCWGG 4 cut(s) 110, 525, 1052, 1086
AjuI GAANNNNNNNTTGG 4 cut(s) 44, 76, 1796, 1828
AluBI AGCT 8 cut(s) 35, 433, 478, 515, 584, 905, 1757, 2003
AluI AGCT 8 cut(s) 35, 433, 478, 515, 584, 905, 1757, 2003
Alw26I GTCTC 4 cut(s) 405, 541, 1056, 1919
AlwI GGATC 8 cut(s) 36, 182, 195, 981, 994, 1716, 1792, 1966
Aor13HI TCCGGA 2 cut(s) 1800, 1984
AoxI GGCC 8 cut(s) 57, 162, 556, 609, 761, 1359, 1465, 1477
ApeKI GCWGC 7 cut(s) 35, 46, 475, 902, 1394, 1428, 1792
ApoI RAATTY 4 cut(s) 52, 178, 313, 1156
ArsI GACNNNNNNTTYG 2 cut(s) 128, 160
AsiGI ACCGGT 1 cut(s) 1928
AspLEI GCGC 1 cut(s) 1861
AspS9I GGNCC 5 cut(s) 80, 163, 440, 1121, 1359
AsuHPI GGTGA 3 cut(s) 1152, 1465, 1943
AvaII GGWCC 3 cut(s) 80, 440, 1121
BalI TGGCCA 3 cut(s) 558, 611, 1467
BamHI GGATCC 2 cut(s) 187, 986
BauI CACGAG 1 cut(s) 877
BbsI GAAGAC 1 cut(s) 1772
BbvCI CCTCAGC 1 cut(s) 444
BbvI GCAGC 7 cut(s) 22, 33, 487, 914, 1406, 1415, 1804
BceAI ACGGC 2 cut(s) 177, 776
BciT130I CCWGG 4 cut(s) 112, 527, 1054, 1088
BciVI GTATCC 1 cut(s) 881
BclI TGATCA 2 cut(s) 1276, 1692
BcoDI GTCTC 4 cut(s) 405, 541, 1056, 1919
BfaI CTAG 4 cut(s) 1125, 1481, 1616, 2000
BfmI CTRYAG 4 cut(s) 36, 47, 376, 1170
BfoI RGCGCY 1 cut(s) 1862
BfuAI ACCTGC 1 cut(s) 31
BfuI GTATCC 1 cut(s) 881
BisI GCNGC 7 cut(s) 36, 47, 476, 903, 1395, 1429, 1793
BlsI GCNGC 7 cut(s) 37, 48, 477, 904, 1396, 1430, 1794
Bme1390I CCNGG 4 cut(s) 112, 527, 1054, 1088
Bme18I GGWCC 3 cut(s) 80, 440, 1121
BmeRI GACNNNNNGTC 1 cut(s) 78
BmgT120I GGNCC 5 cut(s) 80, 163, 440, 1121, 1359
BmiI GGNNCC 9 cut(s) 81, 165, 189, 691, 959, 988, 1122, 1908, 1992
BmrFI CCNGG 4 cut(s) 112, 527, 1054, 1088
BmrI ACTGGG 1 cut(s) 791
BmsI GCATC 5 cut(s) 541, 700, 889, 1213, 1279
BmuI ACTGGG 1 cut(s) 791
BpiI GAAGAC 1 cut(s) 1772
BpmI CTGGAG 2 cut(s) 387, 1977
Bpu10I CCTNAGC 2 cut(s) 444, 1410
BpuEI CTTGAG 1 cut(s) 1644
BsaBI GATNNNNATC 1 cut(s) 985
BsaI GGTCTC 2 cut(s) 405, 1919
BsaJI CCNNGG 7 cut(s) 60, 75, 525, 526, 749, 1053, 1869
BsaWI WCCGGW 3 cut(s) 1800, 1928, 1984
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 111, 491, 527, 699, 797, 1679, 1832
Bse118I RCCGGY 1 cut(s) 1928
Bse3DI GCAATG 1 cut(s) 167
Bse8I GATNNNNATC 1 cut(s) 985
BseAI TCCGGA 2 cut(s) 1800, 1984
BseBI CCWGG 4 cut(s) 112, 527, 1054, 1088
BseDI CCNNGG 7 cut(s) 60, 75, 525, 526, 749, 1053, 1869
BseJI GATNNNNATC 1 cut(s) 985
BseLI CCNNNNNNNGG 8 cut(s) 25, 111, 491, 527, 699, 797, 1679, 1832
BseMI GCAATG 1 cut(s) 167
BseMII CTCAG 4 cut(s) 83, 458, 1424, 1914
BseXI GCAGC 7 cut(s) 22, 33, 487, 914, 1406, 1415, 1804
BshFI GGCC 8 cut(s) 59, 164, 558, 611, 763, 1361, 1467, 1479
BshTI ACCGGT 1 cut(s) 1928
BsiSI CCGG 3 cut(s) 1801, 1929, 1985
BslFI GGGAC 3 cut(s) 268, 1134, 1667
BslI CCNNNNNNNGG 8 cut(s) 25, 111, 491, 527, 699, 797, 1679, 1832
BsmAI GTCTC 4 cut(s) 405, 541, 1056, 1919
BsmFI GGGAC 3 cut(s) 268, 1134, 1667
BsmI GAATGC 1 cut(s) 1462
BsnI GGCC 8 cut(s) 59, 164, 558, 611, 763, 1361, 1467, 1479
Bso31I GGTCTC 2 cut(s) 405, 1919
Bsp13I TCCGGA 2 cut(s) 1800, 1984
Bsp143I GATC 9 cut(s) 28, 187, 845, 986, 1276, 1692, 1708, 1797, 1958
Bsp19I CCATGG 1 cut(s) 749
BspACI CCGC 5 cut(s) 26, 273, 543, 1075, 1484
BspANI GGCC 8 cut(s) 59, 164, 558, 611, 763, 1361, 1467, 1479
BspCNI CTCAG 4 cut(s) 82, 457, 1423, 1915
BspEI TCCGGA 2 cut(s) 1800, 1984
BspLI GGNNCC 9 cut(s) 81, 165, 189, 691, 959, 988, 1122, 1908, 1992
BspMAI CTGCAG 2 cut(s) 40, 51
BspMI ACCTGC 1 cut(s) 31
BspPI GGATC 8 cut(s) 36, 182, 195, 981, 994, 1716, 1792, 1966
BspQI GCTCTTC 1 cut(s) 1038
BspTNI GGTCTC 2 cut(s) 405, 1919
BsrDI GCAATG 1 cut(s) 167
BsrFI RCCGGY 1 cut(s) 1928
BssAI RCCGGY 1 cut(s) 1928
BssECI CCNNGG 7 cut(s) 60, 75, 525, 526, 749, 1053, 1869
BssMI GATC 9 cut(s) 28, 187, 845, 986, 1276, 1692, 1708, 1797, 1958
BssNAI GTATAC 1 cut(s) 930
BssSI CACGAG 1 cut(s) 877
BssT1I CCWWGG 4 cut(s) 60, 75, 749, 1869
Bst1107I GTATAC 1 cut(s) 930
Bst2BI CACGAG 1 cut(s) 877
Bst2UI CCWGG 4 cut(s) 112, 527, 1054, 1088
Bst4CI ACNGT 6 cut(s) 13, 415, 491, 893, 1067, 1595
Bst6I CTCTTC 2 cut(s) 1012, 1038
BstAPI GCANNNNNTGC 1 cut(s) 551
BstC8I GCNNGC 3 cut(s) 199, 556, 1363
BstDEI CTNAG 6 cut(s) 69, 444, 1293, 1410, 1891, 1923
BstDSI CCRYGG 1 cut(s) 749
BstEII GGTNACC 1 cut(s) 1082
BstH2I RGCGCY 1 cut(s) 1862
BstHHI GCGC 1 cut(s) 1861
BstKTI GATC 9 cut(s) 31, 190, 848, 989, 1279, 1695, 1711, 1800, 1961
BstMAI GTCTC 4 cut(s) 405, 541, 1056, 1919
BstMBI GATC 9 cut(s) 28, 187, 845, 986, 1276, 1692, 1708, 1797, 1958
BstMWI GCNNNNNNNGC 3 cut(s) 32, 551, 1856
BstNI CCWGG 4 cut(s) 112, 527, 1054, 1088
BstPI GGTNACC 1 cut(s) 1082
BstSCI CCNGG 4 cut(s) 110, 525, 1052, 1086
BstSFI CTRYAG 4 cut(s) 36, 47, 376, 1170
BstV1I GCAGC 7 cut(s) 22, 33, 487, 914, 1406, 1415, 1804
BstV2I GAAGAC 1 cut(s) 1772
BstX2I RGATCY 3 cut(s) 187, 986, 1797
BstXI CCANNNNNNTGG 2 cut(s) 1475, 1566
BstYI RGATCY 3 cut(s) 187, 986, 1797
BstZ17I GTATAC 1 cut(s) 930
BsuI GTATCC 1 cut(s) 881
BsuRI GGCC 8 cut(s) 59, 164, 558, 611, 763, 1361, 1467, 1479
BtgI CCRYGG 1 cut(s) 749
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 6 cut(s) 105, 496, 619, 674, 997, 1468
BveI ACCTGC 1 cut(s) 31
Cac8I GCNNGC 3 cut(s) 199, 556, 1363
CfoI GCGC 1 cut(s) 1861
Cfr10I RCCGGY 1 cut(s) 1928
Cfr13I GGNCC 5 cut(s) 80, 163, 440, 1121, 1359
Csp6I GTAC 5 cut(s) 451, 703, 871, 1255, 1586
CspAI ACCGGT 1 cut(s) 1928
CspCI CAANNNNNGTGG 2 cut(s) 1523, 1558
CviAII CATG 4 cut(s) 356, 750, 862, 1391
CviQI GTAC 5 cut(s) 451, 703, 871, 1255, 1586
DdeI CTNAG 6 cut(s) 69, 444, 1293, 1410, 1891, 1923
DpnI GATC 9 cut(s) 30, 189, 847, 988, 1278, 1694, 1710, 1799, 1960
DpnII GATC 9 cut(s) 28, 187, 845, 986, 1276, 1692, 1708, 1797, 1958
DraI TTTAAA 1 cut(s) 1140
DraIII CACNNNGTG 1 cut(s) 1919
DriI GACNNNNNGTC 1 cut(s) 78
EaeI YGGCCR 4 cut(s) 556, 609, 761, 1465
Eam1104I CTCTTC 2 cut(s) 1012, 1038
Eam1105I GACNNNNNGTC 1 cut(s) 78
EarI CTCTTC 2 cut(s) 1012, 1038
Eco130I CCWWGG 4 cut(s) 60, 75, 749, 1869
Eco31I GGTCTC 2 cut(s) 405, 1919
Eco32I GATATC 2 cut(s) 91, 1270
Eco47I GGWCC 3 cut(s) 80, 440, 1121
Eco57I CTGAAG 1 cut(s) 1961
Eco91I GGTNACC 1 cut(s) 1082
EcoO109I RGGNCCY 2 cut(s) 80, 1121
EcoO65I GGTNACC 1 cut(s) 1082
EcoRI GAATTC 1 cut(s) 313
EcoRII CCWGG 4 cut(s) 110, 525, 1052, 1086
EcoRV GATATC 2 cut(s) 91, 1270
EcoT14I CCWWGG 4 cut(s) 60, 75, 749, 1869
EcoT22I ATGCAT 1 cut(s) 1008
ErhI CCWWGG 4 cut(s) 60, 75, 749, 1869
FaeI CATG 4 cut(s) 359, 753, 865, 1394
FaqI GGGAC 3 cut(s) 268, 1134, 1667
FatI CATG 4 cut(s) 355, 749, 861, 1390
FauI CCCGC 1 cut(s) 266
FbaI TGATCA 2 cut(s) 1276, 1692
FblI GTMKAC 2 cut(s) 158, 929
Fnu4HI GCNGC 7 cut(s) 36, 47, 476, 903, 1395, 1429, 1793
Fsp4HI GCNGC 7 cut(s) 36, 47, 476, 903, 1395, 1429, 1793
FspBI CTAG 4 cut(s) 1125, 1481, 1616, 2000
GlaI GCGC 1 cut(s) 1860
GluI GCNGC 7 cut(s) 36, 47, 476, 903, 1395, 1429, 1793
GsuI CTGGAG 2 cut(s) 387, 1977
HaeII RGCGCY 1 cut(s) 1862
HaeIII GGCC 8 cut(s) 59, 164, 558, 611, 763, 1361, 1467, 1479
HapII CCGG 3 cut(s) 1801, 1929, 1985
HhaI GCGC 1 cut(s) 1861
Hin1II CATG 4 cut(s) 359, 753, 865, 1394
Hin6I GCGC 1 cut(s) 1859
HinP1I GCGC 1 cut(s) 1859
HincII GTYRAC 1 cut(s) 811
HindII GTYRAC 1 cut(s) 811
HinfI GANTC 5 cut(s) 65, 592, 679, 832, 1874
HpaII CCGG 3 cut(s) 1801, 1929, 1985
HphI GGTGA 3 cut(s) 1152, 1465, 1943
Hpy166II GTNNAC 6 cut(s) 159, 788, 811, 930, 1026, 1545
Hpy188I TCNGA 4 cut(s) 72, 643, 1262, 1951
Hpy8I GTNNAC 6 cut(s) 159, 788, 811, 930, 1026, 1545
HpyAV CCTTC 6 cut(s) 531, 619, 648, 1081, 1091, 1213
HpyCH4III ACNGT 6 cut(s) 13, 415, 491, 893, 1067, 1595
HpyCH4IV ACGT 1 cut(s) 1092
HpyCH4V TGCA 9 cut(s) 38, 49, 371, 696, 713, 902, 1006, 1226, 1394
HpyF10VI GCNNNNNNNGC 3 cut(s) 32, 551, 1856
HpyF3I CTNAG 6 cut(s) 69, 444, 1293, 1410, 1891, 1923
HpySE526I ACGT 1 cut(s) 1092
Hsp92II CATG 4 cut(s) 359, 753, 865, 1394
HspAI GCGC 1 cut(s) 1859
Kpn2I TCCGGA 2 cut(s) 1800, 1984
Ksp22I TGATCA 2 cut(s) 1276, 1692
Kzo9I GATC 9 cut(s) 28, 187, 845, 986, 1276, 1692, 1708, 1797, 1958
LguI GCTCTTC 1 cut(s) 1038
LmnI GCTCC 2 cut(s) 1249, 1996
Lsp1109I GCAGC 7 cut(s) 22, 33, 487, 914, 1406, 1415, 1804
LweI GCATC 5 cut(s) 541, 700, 889, 1213, 1279
MaeI CTAG 4 cut(s) 1125, 1481, 1616, 2000
MaeII ACGT 1 cut(s) 1092
MaeIII GTNAC 7 cut(s) 127, 215, 736, 1082, 1639, 2005, 2020
MalI GATC 9 cut(s) 30, 189, 847, 988, 1278, 1694, 1710, 1799, 1960
MboI GATC 9 cut(s) 28, 187, 845, 986, 1276, 1692, 1708, 1797, 1958
MboII GAAGA 7 cut(s) 216, 816, 1025, 1029, 1291, 1777, 1848
MflI RGATCY 3 cut(s) 187, 986, 1797
MlsI TGGCCA 3 cut(s) 558, 611, 1467
MluNI TGGCCA 3 cut(s) 558, 611, 1467
MmeI TCCRAC 1 cut(s) 1929
Mox20I TGGCCA 3 cut(s) 558, 611, 1467
Mph1103I ATGCAT 1 cut(s) 1008
MroI TCCGGA 2 cut(s) 1800, 1984
MscI TGGCCA 3 cut(s) 558, 611, 1467
MseI TTAA 9 cut(s) 291, 471, 1131, 1139, 1179, 1308, 1509, 1563, 1686
MslI CAYNNNNRTG 5 cut(s) 196, 360, 881, 1011, 1338
Msp20I TGGCCA 3 cut(s) 558, 611, 1467
MspA1I CMGCKG 2 cut(s) 478, 515
MspI CCGG 3 cut(s) 1801, 1929, 1985
MspR9I CCNGG 4 cut(s) 112, 527, 1054, 1088
Mva1269I GAATGC 1 cut(s) 1462
MvaI CCWGG 4 cut(s) 112, 527, 1054, 1088
MwoI GCNNNNNNNGC 3 cut(s) 32, 551, 1856
NcoI CCATGG 1 cut(s) 749
NdeII GATC 9 cut(s) 28, 187, 845, 986, 1276, 1692, 1708, 1797, 1958
NlaIII CATG 4 cut(s) 359, 753, 865, 1394
NlaIV GGNNCC 9 cut(s) 81, 165, 189, 691, 959, 988, 1122, 1908, 1992
NmuCI GTSAC 3 cut(s) 127, 1639, 2005
NsiI ATGCAT 1 cut(s) 1008
PaqCI CACCTGC 1 cut(s) 31
PasI CCCWGGG 1 cut(s) 526
PciSI GCTCTTC 1 cut(s) 1038
PctI GAATGC 1 cut(s) 1462
PfeI GAWTC 5 cut(s) 65, 592, 679, 832, 1874
PflMI CCANNNNNTGG 2 cut(s) 797, 1832
PinAI ACCGGT 1 cut(s) 1928
PkrI GCNGC 7 cut(s) 37, 48, 477, 904, 1396, 1430, 1794
PpuMI RGGWCCY 2 cut(s) 80, 1121
Psp5II RGGWCCY 2 cut(s) 80, 1121
Psp6I CCWGG 4 cut(s) 110, 525, 1052, 1086
PspEI GGTNACC 1 cut(s) 1082
PspGI CCWGG 4 cut(s) 110, 525, 1052, 1086
PspN4I GGNNCC 9 cut(s) 81, 165, 189, 691, 959, 988, 1122, 1908, 1992
PspPI GGNCC 5 cut(s) 80, 163, 440, 1121, 1359
PspPPI RGGWCCY 2 cut(s) 80, 1121
PstI CTGCAG 2 cut(s) 40, 51
PsuI RGATCY 3 cut(s) 187, 986, 1797
PvuII CAGCTG 2 cut(s) 478, 515
RsaI GTAC 5 cut(s) 452, 704, 872, 1256, 1587
RsaNI GTAC 5 cut(s) 451, 703, 871, 1255, 1586
RseI CAYNNNNRTG 5 cut(s) 196, 360, 881, 1011, 1338
SapI GCTCTTC 1 cut(s) 1038
SaqAI TTAA 9 cut(s) 291, 471, 1131, 1139, 1179, 1308, 1509, 1563, 1686
SatI GCNGC 7 cut(s) 36, 47, 476, 903, 1395, 1429, 1793
Sau3AI GATC 9 cut(s) 28, 187, 845, 986, 1276, 1692, 1708, 1797, 1958
Sau96I GGNCC 5 cut(s) 80, 163, 440, 1121, 1359
ScrFI CCNGG 4 cut(s) 112, 527, 1054, 1088
SfaNI GCATC 5 cut(s) 541, 700, 889, 1213, 1279
SfcI CTRYAG 4 cut(s) 36, 47, 376, 1170
SinI GGWCC 3 cut(s) 80, 440, 1121
SmiMI CAYNNNNRTG 5 cut(s) 196, 360, 881, 1011, 1338
SmlI CTYRAG 1 cut(s) 1659
SmoI CTYRAG 1 cut(s) 1659
SsiI CCGC 5 cut(s) 26, 273, 543, 1075, 1484
SspI AATATT 1 cut(s) 1526
SspMI CTAG 4 cut(s) 1125, 1481, 1616, 2000
StyD4I CCNGG 4 cut(s) 110, 525, 1052, 1086
StyI CCWWGG 4 cut(s) 60, 75, 749, 1869
TaaI ACNGT 6 cut(s) 13, 415, 491, 893, 1067, 1595
TaiI ACGT 1 cut(s) 1095
TaqI TCGA 1 cut(s) 1759
TaqII GACCGA 2 cut(s) 144, 2024
TatI WGTACW 1 cut(s) 1254
TfiI GAWTC 5 cut(s) 65, 592, 679, 832, 1874
Tru1I TTAA 9 cut(s) 291, 471, 1131, 1139, 1179, 1308, 1509, 1563, 1686
Tru9I TTAA 9 cut(s) 291, 471, 1131, 1139, 1179, 1308, 1509, 1563, 1686
TscAI CASTG 6 cut(s) 112, 496, 619, 681, 997, 1468
TseFI GTSAC 3 cut(s) 127, 1639, 2005
TseI GCWGC 7 cut(s) 35, 46, 475, 902, 1394, 1428, 1792
Tsp45I GTSAC 3 cut(s) 127, 1639, 2005
TspDTI ATGAA 7 cut(s) 850, 951, 1291, 1322, 1379, 1641, 1767
TspGWI ACGGA 1 cut(s) 924
TspRI CASTG 6 cut(s) 112, 496, 619, 681, 997, 1468
Van91I CCANNNNNTGG 2 cut(s) 797, 1832
VpaK11BI GGWCC 3 cut(s) 80, 440, 1121
XapI RAATTY 4 cut(s) 52, 178, 313, 1156
XcmI CCANNNNNNNNNTGG 1 cut(s) 604
XmiI GTMKAC 2 cut(s) 158, 929
XspI CTAG 4 cut(s) 1125, 1481, 1616, 2000
Zsp2I ATGCAT 1 cut(s) 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.