Rh5DG574100

YTH domain family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0001378
Physical Location & Seq
Forward (+)
88104954 .. 88109931
4978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG574100.1

Sequence Viewer

Length: 1797 bp
ATGGATCAATCTTTCTCCTATCTCCCAAATGGTTATCCATCAACAGCCTATTACTATGGAGGCTATGATGGGACTGCCGACTGGGATGAGTACTCGAGATATGTGAATCCAGAGGGAGTAGATATGACTTCCGGGGTTTATGGAGATAACGGGTCTCTTATGTACCACCATGGTTATGGGTATGCACCGTATGGGCCTTATTCACCAGCAGCTTCCCCTGTTCCAACTATGGGAAATGATGGTCAATTATATGGTCCTCAACACTACCAGTATCCGCCCTATTTCCAGCCGCTGACTCCAACCAGTGGGCCATACACTCCCAGTCCTGTGGCCCCTCAGAATGAGGTATCCACATCTTTAGCTGCTGACCAAAAGCCTCAGCCTGTGGAAACTGCTAATGGAATTTCTAATGGCATTGCAAATATGAAAGGAAATAACATTTCAGCTCCCTTATCGACATATCAAACCACATCTTTCAACTCCAATGGTTCATATGGACGAGGTGCTTTACCTGCACGTGTTCCTACTCCTGGGTACCAGGACCCAAGATATGGTTATGACACAGTACGTTCTCCAATTCCTTGGTTAGATGCCCCACTTTTTTCAGATGGGCAGCATAGACCTGTGGCAAATACACCCATTACTTCTTCAAACTCGAATGGCAATAGAATTCCATCTTTGAGGAATCAGAACTACCGTCCAAATTCTCACTTCATGGGTTTGCACCACCCAAGACCGCTGTCAGGAATAGGTACAGCTCAAGGGTTTATGAATAGCAGCATGTACCCAAGCAAGCTATTTGGCCAGTATGGAAACACAGTTAGATCCGGTCTGGGATTTGGGTCTCATGGTTATGATTCGCGAACCAATGGACGCACATGGCTGGCTGTTGACAACAAGTATAAACAACCCAGGGGACGTAATGGTGGTTACTATGGATATGGTAATGAGAACTCGGATGGTTTAAATGAACTCAACAGAGGACCTCGGGCGAGAGGCTCAAAGAACCAAAAGAGTTTTCCCCCTAGTGCATTGGCTATCAAGGGACAGAACGTGCCAGCAAATCTTAGTAATGATGAGGAAAAGGATACAAGTTCTGTACCAGACAGAGAGCAATACAACAAAGCAGATTTTCCGGAGGATTATACTGATGCCAAATTTTTCATCATCAAGTCATATAGTGAGGATGATGTCCATAAGAGCATCAAGTATAATGTTTGGGCCAGCACACCAAATGGCAACAAGAAGCTTCATGCAGCATATCAGGAGGCTCAGGAGAAGACCGGCGGCTGCCCTGTATTTCTTTTTTTCTCGGTCAATACCAGTGGGCAATTTGTCGGTGTCGCTGAGATGTTGGGGCCTGTTGATTTTAACAAGAATTTGGAGTACTGGCAGCAAGACAAATGGAATGGCTGTTTCTCTGTCAAATGGCATATTGTTAAAGACGTTCCTAACAGTTTGCTGAAGCATATTACTCTTGAAAATAATGAAAACAAGCCTGTGACTAATAGTAGGGACACTCAAGAGGTTAAGTTGGAACCAGGGCTTAAAATGATCAAAATATTCAAGGAGCATTCAAGCAAAACATGCATTTTGGATGACTTTGGATTTTATGAGTCCCGCCAGAAGACAATTCAGGAGAAGAAGGCTAAGCAACAGCAGCAGTTTCAGAAGCAGGTAAATCGTTTCTTGCAACTTGTGTTTTTTTTTTTTGGTTCTCTTTCTTCAAGTCCCGCCAGAAGGCATGGACCGTATTATTTACTATTTTGCAAGTTAATTATTCCAAATTACCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

598

Amino Acids

66.82

Weight (kDa)

8.8

Isoelectric Point (pI)

36.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 385 - 523 3.2e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 520, 1666
Acc65I GGTACC 1 cut(s) 534
AccB1I GGYRCC 1 cut(s) 534
AccB7I CCANNNNNTGG 2 cut(s) 305, 551
AccII CGCG 1 cut(s) 862
AccIII TCCGGA 1 cut(s) 1135
AciI CCGC 6 cut(s) 275, 290, 737, 1287, 1621, 1734
AclWI GGATC 2 cut(s) 12, 819
AcoI YGGCCR 1 cut(s) 802
AcsI RAATTY 5 cut(s) 402, 669, 703, 1157, 1378
AcuI CTGAAG 1 cut(s) 1484
AcvI CACGTG 1 cut(s) 518
AfaI GTAC 8 cut(s) 92, 164, 536, 567, 754, 785, 1101, 1388
AfiI CCNNNNNNNGG 6 cut(s) 230, 305, 530, 551, 743, 1740
AflIII ACRYGT 1 cut(s) 517
AgsI TTSAA 6 cut(s) 478, 651, 1481, 1567, 1578, 1728
AjnI CCWGG 4 cut(s) 529, 537, 911, 1540
AjuI GAANNNNNNNTTGG 2 cut(s) 1002, 1034
AluBI AGCT 6 cut(s) 212, 362, 446, 758, 796, 1249
AluI AGCT 6 cut(s) 212, 362, 446, 758, 796, 1249
Alw26I GTCTC 2 cut(s) 159, 849
AlwI GGATC 2 cut(s) 12, 819
AlwNI CAGNNNCTG 1 cut(s) 292
Ama87I CYCGRG 2 cut(s) 94, 987
Aor13HI TCCGGA 1 cut(s) 1135
AoxI GGCC 6 cut(s) 194, 308, 330, 802, 1221, 1358
ApeKI GCWGC 8 cut(s) 209, 362, 613, 777, 1256, 1290, 1393, 1660
ApoI RAATTY 5 cut(s) 402, 669, 703, 1157, 1378
Asp718I GGTACC 1 cut(s) 534
AspS9I GGNCC 9 cut(s) 194, 254, 308, 331, 541, 983, 1221, 1358, 1748
AsuC2I CCSGG 1 cut(s) 133
AsuHPI GGTGA 1 cut(s) 195
AvaI CYCGRG 2 cut(s) 94, 987
AvaII GGWCC 4 cut(s) 254, 541, 983, 1748
BalI TGGCCA 1 cut(s) 804
BanI GGYRCC 1 cut(s) 534
BbrPI CACGTG 1 cut(s) 518
BbsI GAAGAC 2 cut(s) 1286, 1634
BbvCI CCTCAGC 1 cut(s) 378
BbvI GCAGC 8 cut(s) 221, 349, 625, 789, 1268, 1277, 1405, 1672
BccI CCATC 6 cut(s) 46, 62, 233, 602, 682, 953
BcgI CGANNNNNNTGC 2 cut(s) 1664, 1698
BciT130I CCWGG 4 cut(s) 531, 539, 913, 1542
BciVI GTATCC 3 cut(s) 282, 358, 1081
BclI TGATCA 1 cut(s) 1554
BcnI CCSGG 1 cut(s) 133
BcoDI GTCTC 2 cut(s) 159, 849
BfaI CTAG 1 cut(s) 1026
BfuAI ACCTGC 2 cut(s) 520, 1666
BfuI GTATCC 3 cut(s) 282, 358, 1081
BlpI GCTNAGC 1 cut(s) 1650
BmcAI AGTACT 2 cut(s) 92, 1388
Bme1390I CCNGG 5 cut(s) 133, 531, 539, 913, 1542
Bme18I GGWCC 4 cut(s) 254, 541, 983, 1748
BmeT110I CYCGRG 2 cut(s) 94, 987
BmgT120I GGNCC 9 cut(s) 194, 254, 308, 331, 541, 983, 1221, 1358, 1748
BmiI GGNNCC 5 cut(s) 333, 536, 543, 1359, 1539
BmrFI CCNGG 5 cut(s) 133, 531, 539, 913, 1542
BmrI ACTGGG 2 cut(s) 91, 315
BmsI GCATC 3 cut(s) 580, 1141, 1212
BmuI ACTGGG 2 cut(s) 91, 315
BoxI GACNNNNGTC 1 cut(s) 739
BpiI GAAGAC 2 cut(s) 1286, 1634
Bpu10I CCTNAGC 2 cut(s) 378, 1272
Bpu1102I GCTNAGC 1 cut(s) 1650
BpuEI CTTGAG 2 cut(s) 744, 1506
BpuMI CCSGG 1 cut(s) 133
BsaAI YACGTR 1 cut(s) 518
BsaI GGTCTC 2 cut(s) 159, 849
BsaJI CCNNGG 8 cut(s) 132, 169, 530, 581, 911, 912, 986, 1541
BsaWI WCCGGW 2 cut(s) 827, 1135
Bsc4I CCNNNNNNNGG 6 cut(s) 230, 305, 530, 551, 743, 1740
Bse118I RCCGGY 1 cut(s) 1283
Bse1I ACTGG 7 cut(s) 86, 268, 303, 321, 805, 1323, 1394
Bse3DI GCAATG 1 cut(s) 414
BseAI TCCGGA 1 cut(s) 1135
BseBI CCWGG 4 cut(s) 531, 539, 913, 1542
BseDI CCNNGG 8 cut(s) 132, 169, 530, 581, 911, 912, 986, 1541
BseGI GGATG 4 cut(s) 91, 964, 1192, 1603
BseLI CCNNNNNNNGG 6 cut(s) 230, 305, 530, 551, 743, 1740
BseMI GCAATG 1 cut(s) 414
BseMII CTCAG 4 cut(s) 350, 392, 1286, 1338
BseNI ACTGG 7 cut(s) 86, 268, 303, 321, 805, 1323, 1394
BseXI GCAGC 8 cut(s) 221, 349, 625, 789, 1268, 1277, 1405, 1672
BsgI GTGCAG 1 cut(s) 498
Bsh1236I CGCG 1 cut(s) 862
BshFI GGCC 6 cut(s) 196, 310, 332, 804, 1223, 1360
BshNI GGYRCC 1 cut(s) 534
BsiHKCI CYCGRG 2 cut(s) 94, 987
BsiSI CCGG 4 cut(s) 132, 828, 1136, 1284
BslFI GGGAC 6 cut(s) 85, 930, 1059, 1529, 1603, 1716
BslI CCNNNNNNNGG 6 cut(s) 230, 305, 530, 551, 743, 1740
BsmAI GTCTC 2 cut(s) 159, 849
BsmFI GGGAC 6 cut(s) 85, 930, 1059, 1529, 1603, 1716
BsmI GAATGC 1 cut(s) 1573
BsnI GGCC 6 cut(s) 196, 310, 332, 804, 1223, 1360
Bso31I GGTCTC 2 cut(s) 159, 849
BsoBI CYCGRG 2 cut(s) 94, 987
Bsp13I TCCGGA 1 cut(s) 1135
Bsp143I GATC 3 cut(s) 4, 824, 1554
Bsp1720I GCTNAGC 1 cut(s) 1650
Bsp19I CCATGG 1 cut(s) 169
Bsp68I TCGCGA 1 cut(s) 862
BspACI CCGC 6 cut(s) 275, 290, 737, 1287, 1621, 1734
BspANI GGCC 6 cut(s) 196, 310, 332, 804, 1223, 1360
BspCNI CTCAG 4 cut(s) 349, 391, 1285, 1339
BspEI TCCGGA 1 cut(s) 1135
BspFNI CGCG 1 cut(s) 862
BspLI GGNNCC 5 cut(s) 333, 536, 543, 1359, 1539
BspMI ACCTGC 2 cut(s) 520, 1666
BspPI GGATC 2 cut(s) 12, 819
BspT107I GGYRCC 1 cut(s) 534
BspTNI GGTCTC 2 cut(s) 159, 849
BsrDI GCAATG 1 cut(s) 414
BsrFI RCCGGY 1 cut(s) 1283
BsrI ACTGG 7 cut(s) 86, 268, 303, 321, 805, 1323, 1394
BssAI RCCGGY 1 cut(s) 1283
BssECI CCNNGG 8 cut(s) 132, 169, 530, 581, 911, 912, 986, 1541
BssMI GATC 3 cut(s) 4, 824, 1554
BssT1I CCWWGG 2 cut(s) 169, 581
Bst2UI CCWGG 4 cut(s) 531, 539, 913, 1542
Bst4CI ACNGT 6 cut(s) 189, 565, 698, 820, 1457, 1752
BstAPI GCANNNNNTGC 1 cut(s) 1587
BstBAI YACGTR 1 cut(s) 518
BstC8I GCNNGC 4 cut(s) 794, 885, 1059, 1225
BstDEI CTNAG 6 cut(s) 336, 378, 1067, 1272, 1347, 1650
BstDSI CCRYGG 1 cut(s) 169
BstF5I GGATG 4 cut(s) 91, 964, 1192, 1603
BstFNI CGCG 1 cut(s) 862
BstKTI GATC 3 cut(s) 7, 827, 1557
BstMAI GTCTC 2 cut(s) 159, 849
BstMBI GATC 3 cut(s) 4, 824, 1554
BstMWI GCNNNNNNNGC 3 cut(s) 512, 1587, 1660
BstNI CCWGG 4 cut(s) 531, 539, 913, 1542
BstNSI RCATGY 2 cut(s) 784, 1590
BstPAI GACNNNNGTC 1 cut(s) 739
BstSCI CCNGG 5 cut(s) 131, 529, 537, 911, 1540
BstUI CGCG 1 cut(s) 862
BstV1I GCAGC 8 cut(s) 221, 349, 625, 789, 1268, 1277, 1405, 1672
BstV2I GAAGAC 2 cut(s) 1286, 1634
BstX2I RGATCY 1 cut(s) 824
BstXI CCANNNNNNTGG 3 cut(s) 176, 328, 582
BstYI RGATCY 1 cut(s) 824
BsuI GTATCC 3 cut(s) 282, 358, 1081
BsuRI GGCC 6 cut(s) 196, 310, 332, 804, 1223, 1360
BtgI CCRYGG 1 cut(s) 169
BtsCI GGATG 4 cut(s) 91, 964, 1192, 1603
BtsIMutI CAGTG 2 cut(s) 310, 1330
BtuMI TCGCGA 1 cut(s) 862
BveI ACCTGC 2 cut(s) 520, 1666
Cac8I GCNNGC 4 cut(s) 794, 885, 1059, 1225
CaiI CAGNNNCTG 1 cut(s) 292
Cfr10I RCCGGY 1 cut(s) 1283
Cfr13I GGNCC 9 cut(s) 194, 254, 308, 331, 541, 983, 1221, 1358, 1748
CseI GACGC 1 cut(s) 882
Csp6I GTAC 8 cut(s) 91, 163, 535, 566, 753, 784, 1100, 1387
CspCI CAANNNNNGTGG 2 cut(s) 1306, 1341
CviAII CATG 8 cut(s) 170, 715, 781, 848, 879, 1253, 1587, 1745
CviQI GTAC 8 cut(s) 91, 163, 535, 566, 753, 784, 1100, 1387
DdeI CTNAG 6 cut(s) 336, 378, 1067, 1272, 1347, 1650
DpnI GATC 3 cut(s) 6, 826, 1556
DpnII GATC 3 cut(s) 4, 824, 1554
DraI TTTAAA 1 cut(s) 966
EaeI YGGCCR 1 cut(s) 802
EciI GGCGGA 1 cut(s) 264
Eco130I CCWWGG 2 cut(s) 169, 581
Eco31I GGTCTC 2 cut(s) 159, 849
Eco47I GGWCC 4 cut(s) 254, 541, 983, 1748
Eco57I CTGAAG 1 cut(s) 1484
Eco72I CACGTG 1 cut(s) 518
Eco88I CYCGRG 2 cut(s) 94, 987
EcoO109I RGGNCCY 3 cut(s) 541, 983, 1358
EcoRI GAATTC 1 cut(s) 669
EcoRII CCWGG 4 cut(s) 529, 537, 911, 1540
EcoT14I CCWWGG 2 cut(s) 169, 581
EcoT22I ATGCAT 1 cut(s) 1592
ErhI CCWWGG 2 cut(s) 169, 581
FaeI CATG 8 cut(s) 173, 718, 784, 851, 882, 1256, 1590, 1748
FaqI GGGAC 6 cut(s) 85, 930, 1059, 1529, 1603, 1716
FatI CATG 8 cut(s) 169, 714, 780, 847, 878, 1252, 1586, 1744
FauI CCCGC 2 cut(s) 1628, 1741
FauNDI CATATG 1 cut(s) 493
FbaI TGATCA 1 cut(s) 1554
FokI GGATG 4 cut(s) 98, 971, 1199, 1610
FspBI CTAG 1 cut(s) 1026
HaeIII GGCC 6 cut(s) 196, 310, 332, 804, 1223, 1360
HapII CCGG 4 cut(s) 132, 828, 1136, 1284
HgaI GACGC 1 cut(s) 882
Hin1II CATG 8 cut(s) 173, 718, 784, 851, 882, 1256, 1590, 1748
HincII GTYRAC 1 cut(s) 892
HindII GTYRAC 1 cut(s) 892
HindIII AAGCTT 1 cut(s) 1247
HinfI GANTC 5 cut(s) 106, 295, 685, 857, 1616
HpaII CCGG 4 cut(s) 132, 828, 1136, 1284
HphI GGTGA 1 cut(s) 195
Hpy166II GTNNAC 1 cut(s) 892
Hpy188I TCNGA 5 cut(s) 339, 607, 690, 958, 1671
Hpy8I GTNNAC 1 cut(s) 892
HpyAV CCTTC 2 cut(s) 1639, 1734
HpyCH4III ACNGT 6 cut(s) 189, 565, 698, 820, 1457, 1752
HpyCH4IV ACGT 5 cut(s) 517, 568, 919, 1053, 1446
HpyCH4V TGCA 9 cut(s) 185, 419, 515, 724, 1031, 1256, 1590, 1693, 1770
HpyF10VI GCNNNNNNNGC 3 cut(s) 512, 1587, 1660
HpyF3I CTNAG 6 cut(s) 336, 378, 1067, 1272, 1347, 1650
HpySE526I ACGT 5 cut(s) 517, 568, 919, 1053, 1446
Hsp92II CATG 8 cut(s) 173, 718, 784, 851, 882, 1256, 1590, 1748
Kpn2I TCCGGA 1 cut(s) 1135
KpnI GGTACC 1 cut(s) 538
Ksp22I TGATCA 1 cut(s) 1554
Kzo9I GATC 3 cut(s) 4, 824, 1554
LmnI GCTCC 2 cut(s) 451, 1570
Lsp1109I GCAGC 8 cut(s) 221, 349, 625, 789, 1268, 1277, 1405, 1672
LweI GCATC 3 cut(s) 580, 1141, 1212
MaeI CTAG 1 cut(s) 1026
MaeII ACGT 5 cut(s) 517, 568, 919, 1053, 1446
MaeIII GTNAC 2 cut(s) 929, 1501
MalI GATC 3 cut(s) 6, 826, 1556
MboI GATC 3 cut(s) 4, 824, 1554
MboII GAAGA 5 cut(s) 639, 1291, 1639, 1654, 1716
MflI RGATCY 1 cut(s) 824
MlsI TGGCCA 1 cut(s) 804
MluNI TGGCCA 1 cut(s) 804
MlyI GAGTC 2 cut(s) 289, 1625
MmeI TCCRAC 3 cut(s) 248, 323, 1515
Mox20I TGGCCA 1 cut(s) 804
Mph1103I ATGCAT 1 cut(s) 1592
MroI TCCGGA 1 cut(s) 1135
MscI TGGCCA 1 cut(s) 804
MseI TTAA 6 cut(s) 965, 1371, 1440, 1530, 1548, 1775
MslI CAYNNNNRTG 2 cut(s) 174, 852
Msp20I TGGCCA 1 cut(s) 804
MspA1I CMGCKG 2 cut(s) 292, 739
MspI CCGG 4 cut(s) 132, 828, 1136, 1284
MspR9I CCNGG 5 cut(s) 133, 531, 539, 913, 1542
Mva1269I GAATGC 1 cut(s) 1573
MvaI CCWGG 4 cut(s) 531, 539, 913, 1542
MvnI CGCG 1 cut(s) 862
MwoI GCNNNNNNNGC 3 cut(s) 512, 1587, 1660
NciI CCSGG 1 cut(s) 133
NcoI CCATGG 1 cut(s) 169
NdeI CATATG 1 cut(s) 493
NdeII GATC 3 cut(s) 4, 824, 1554
NlaIII CATG 8 cut(s) 173, 718, 784, 851, 882, 1256, 1590, 1748
NlaIV GGNNCC 5 cut(s) 333, 536, 543, 1359, 1539
NmuCI GTSAC 1 cut(s) 1501
NruI TCGCGA 1 cut(s) 862
NsiI ATGCAT 1 cut(s) 1592
NspI RCATGY 2 cut(s) 784, 1590
PaeR7I CTCGAG 1 cut(s) 94
PasI CCCWGGG 1 cut(s) 912
PctI GAATGC 1 cut(s) 1573
PfeI GAWTC 3 cut(s) 106, 685, 857
PflMI CCANNNNNTGG 2 cut(s) 305, 551
PleI GAGTC 2 cut(s) 289, 1624
PmaCI CACGTG 1 cut(s) 518
PmlI CACGTG 1 cut(s) 518
PpsI GAGTC 2 cut(s) 289, 1624
Ppu21I YACGTR 1 cut(s) 518
PpuMI RGGWCCY 2 cut(s) 541, 983
PshAI GACNNNNGTC 1 cut(s) 739
Psp5II RGGWCCY 2 cut(s) 541, 983
Psp6I CCWGG 4 cut(s) 529, 537, 911, 1540
PspCI CACGTG 1 cut(s) 518
PspGI CCWGG 4 cut(s) 529, 537, 911, 1540
PspN4I GGNNCC 5 cut(s) 333, 536, 543, 1359, 1539
PspPI GGNCC 9 cut(s) 194, 254, 308, 331, 541, 983, 1221, 1358, 1748
PspPPI RGGWCCY 2 cut(s) 541, 983
PstNI CAGNNNCTG 1 cut(s) 292
PsuI RGATCY 1 cut(s) 824
RruI TCGCGA 1 cut(s) 862
RsaI GTAC 8 cut(s) 92, 164, 536, 567, 754, 785, 1101, 1388
RsaNI GTAC 8 cut(s) 91, 163, 535, 566, 753, 784, 1100, 1387
RseI CAYNNNNRTG 2 cut(s) 174, 852
SaqAI TTAA 6 cut(s) 965, 1371, 1440, 1530, 1548, 1775
Sau3AI GATC 3 cut(s) 4, 824, 1554
Sau96I GGNCC 9 cut(s) 194, 254, 308, 331, 541, 983, 1221, 1358, 1748
ScaI AGTACT 2 cut(s) 92, 1388
SchI GAGTC 2 cut(s) 289, 1625
ScrFI CCNGG 5 cut(s) 133, 531, 539, 913, 1542
SfaNI GCATC 3 cut(s) 580, 1141, 1212
Sfr274I CTCGAG 1 cut(s) 94
SinI GGWCC 4 cut(s) 254, 541, 983, 1748
SlaI CTCGAG 1 cut(s) 94
SmiMI CAYNNNNRTG 2 cut(s) 174, 852
SmlI CTYRAG 3 cut(s) 94, 759, 1521
SmoI CTYRAG 3 cut(s) 94, 759, 1521
SsiI CCGC 6 cut(s) 275, 290, 737, 1287, 1621, 1734
SspI AATATT 1 cut(s) 1563
SspMI CTAG 1 cut(s) 1026
StyD4I CCNGG 5 cut(s) 131, 529, 537, 911, 1540
StyI CCWWGG 2 cut(s) 169, 581
TaaI ACNGT 6 cut(s) 189, 565, 698, 820, 1457, 1752
TaiI ACGT 5 cut(s) 520, 571, 922, 1056, 1449
TaqI TCGA 3 cut(s) 95, 455, 656
TaqII GACCGA 1 cut(s) 1303
TatI WGTACW 2 cut(s) 90, 1386
TauI GCSGC 2 cut(s) 292, 1290
TfiI GAWTC 3 cut(s) 106, 685, 857
Tru1I TTAA 6 cut(s) 965, 1371, 1440, 1530, 1548, 1775
Tru9I TTAA 6 cut(s) 965, 1371, 1440, 1530, 1548, 1775
TscAI CASTG 2 cut(s) 310, 1330
TseFI GTSAC 1 cut(s) 1501
TseI GCWGC 8 cut(s) 209, 362, 613, 777, 1256, 1290, 1393, 1660
Tsp45I GTSAC 1 cut(s) 1501
TspDTI ATGAA 8 cut(s) 440, 480, 703, 785, 984, 1153, 1241, 1503
TspRI CASTG 2 cut(s) 310, 1330
Van91I CCANNNNNTGG 2 cut(s) 305, 551
VpaK11BI GGWCC 4 cut(s) 254, 541, 983, 1748
XapI RAATTY 5 cut(s) 402, 669, 703, 1157, 1378
XceI RCATGY 2 cut(s) 784, 1590
XcmI CCANNNNNNNNNTGG 1 cut(s) 173
XhoI CTCGAG 1 cut(s) 94
XspI CTAG 1 cut(s) 1026
ZrmI AGTACT 2 cut(s) 92, 1388
Zsp2I ATGCAT 1 cut(s) 1592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.