RLG00000037066

YTH domain family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001378
Physical Location & Seq
Forward (+)
88040524 .. 88044664
4141 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000037066

Sequence Viewer

Length: 2016 bp
ATGGCTACCGTCGCTTCACTTCCGCCGCCTGCCGATCAAGCTTCAGACTTGCTACAGAATTTGTCATTGGATTCTCAGGCCACGGAGGCCAAAATTTCTGAGCCCGCCAAGAAGGCCAATGCTGTGACTACTAAGCTCCAGTCAACTGACCGGACTAGGACTACCACCCCATCACTGAAGGATTCAACCATGCCCTATCACCCTAATGGTTATGCCTCTTCTGCCTATTACTATGGAGGATATGGTGGACTTGAGTGGGGCAACAATATGAATTCTGTTGTCTATGGTTATGGTTATGCACCCTATAACACATATTCAACAGCAGGGTCTCCAACTGTGGGAAGTGGTCAGCTATATGAACAGCAGTATCAATATCCTCCCTATTTTAAGCAGCTGACTCCTAAAAGTGGTACACCCTACATGCCTAATTCAGTTGTTCCTTCCAAGGGGGGTGTTACCACCACAAAGGATGCTGACCAAAAGTCCTCACCGGTAGGAACAGCTAATGCGATATCTAATGGTATTTTGTCCAGTGTGGGGCTGAAGGAAAATAATCTTTCAGACTTCTCCAAATATCAAAACTCATCTCTAAATGTAAAGGGTTCCTATGAGGGATACCCTGATGCAGTGTATGGTTTTGATGGTTTGATGTCTCCCATACCATGGTTAGAAGGGTCAACATTTTCAAATGGACAGGCCAAGGGGATGACCGGAAATACAGTCAACAGAACTCCGTCTTCTAAGAATCAGATTTCCCGACCAAATTCTCCATACATGGGTTTGCTGCCAAGGTTGGGGTACGGTTTGGATACAGCTCGTGGACTTAGTGGGATGTATGCCAATGATTTATATGGTCATAACTGGAACACATATGGACTTGGTATGGGGTTTGGATCCAATAGTTTTGGTATGGCAAGAAATGGATATGGGTGGACCTCTCTTCAAAACAAGTATAAGTCAAGGGGGCGTGGCAGCACCTTTCGCTATGGTAACCAGGACATAGATGGGTTGGAGGAGTTGAACAAAGGACCTAGAGGAAAGATTTATAAAGCTGGGGTCAGTGTGGCGTTGAATAAAACTAATGATGAGAAGGATACAACTAGCACCATTCCAGAGGGGGAGCAGCACTCTGGAGCAGATATCATTGATAATTACTCAGATGCTAAGTTCTTCATTATAAAGTCATATAGTGAGGATGACGTTCATAAGAGTGTTAAGTATAATGTCTGGGCCAGCACCCCAAATGGAAACAAGAAACTTAATGCTGCATACCAGGAGGCTCAGGAGAAAGCTAGTGGCTGCCCTGTATTTCTGCTCTTCTCGGTGAATGCTAGTGGTCAATTCGTTGGCCTAGCGGAGATGGTGGGGCCGGTTGATTTTGACAAGAATGTGGAGTATTGGCAACAAGACAAGTGGACTGGTTGTTTCCCTGTTAAGTGGCACATTGTAAAGGATGTACCCAACAGTTTGCTAAAGCACATTACCCTTGAAAACAATGAAAACAAACCTGTCACAAACAGCAGGGACACTCAAGAGGTCAAGTTAGAGGAGGGGCTTAAATTGATCAAACTATTCAAGGATCATTCCGGTAAAACATGCCTTTTGGATGATTTTGAGTTCTATGAAGATCGGCAAAAGACAATTGAGGAAGTTAAAGCAAAGAGGCAGACTCGGAAGAAGAAGGTATTGGAGGAGAAGCCAGCTGATGGAAGAAATGATGGGACAGAAGAGGCACTACTCAAATCACCAGAGTCATTGGGAACTGCATTGGATTTGGTTAAGGAACCAACACCAATTGATCAGAGTGATGAACAAGTGAAGCCTTTGGAGAATGGCTCAGTTGCAGAAGCTGGAGATGACCTGAAGGGTCCACAACCAGTTGTTGAAGAGTCTGAGGTAGCAATTGAAGTAAATCATGGCCTTGCTGAGTTATCATTGGTGAGGAAGCCATTGGCTATTAATCCAATTAATCGTGACATGTTTATTCGAGTGATGATGCATCATGAGGTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

672

Amino Acids

73.65

Weight (kDa)

5.93

Isoelectric Point (pI)

35.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 388 - 526 1.4e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1047, 1178
AccB7I CCANNNNNTGG 2 cut(s) 663, 1706
AciI CCGC 4 cut(s) 23, 26, 105, 1355
AclWI GGATC 3 cut(s) 888, 901, 1587
AcsI RAATTY 4 cut(s) 58, 93, 271, 763
AcuI CTGAAG 4 cut(s) 27, 197, 563, 1883
AfaI GTAC 3 cut(s) 412, 800, 1458
AfiI CCNNNNNNNGG 8 cut(s) 338, 407, 446, 537, 663, 776, 794, 1706
AflIII ACRYGT 1 cut(s) 1977
AgeI ACCGGT 1 cut(s) 490
AhdI GACNNNNNGTC 1 cut(s) 481
AjnI CCWGG 2 cut(s) 993, 1272
AjuI GAANNNNNNNTTGG 4 cut(s) 50, 82, 1670, 1702
Alw26I GTCTC 2 cut(s) 333, 657
AlwI GGATC 3 cut(s) 888, 901, 1587
AlwNI CAGNNNCTG 1 cut(s) 1850
AoxI GGCC 8 cut(s) 78, 87, 114, 696, 1230, 1348, 1367, 1918
ApeKI GCWGC 6 cut(s) 391, 784, 972, 1123, 1265, 1299
ApoI RAATTY 4 cut(s) 58, 93, 271, 763
AseI ATTAAT 2 cut(s) 1959, 1968
AsiGI ACCGGT 1 cut(s) 490
AspS9I GGNCC 5 cut(s) 933, 1028, 1230, 1367, 1868
AsuHPI GGTGA 5 cut(s) 191, 480, 1336, 1737, 1951
AvaII GGWCC 3 cut(s) 933, 1028, 1868
BaeI ACNNNNGTAYC 2 cut(s) 350, 383
BamHI GGATCC 1 cut(s) 893
BanII GRGCYC 1 cut(s) 105
BarI GAAGNNNNNNTAC 2 cut(s) 1719, 1751
BauI CACGAG 1 cut(s) 816
BbsI GAAGAC 1 cut(s) 729
BbvI GCAGC 6 cut(s) 403, 771, 984, 1135, 1252, 1286
BccI CCATC 6 cut(s) 178, 635, 998, 1354, 1700, 1712
BciT130I CCWGG 2 cut(s) 995, 1274
BciVI GTATCC 3 cut(s) 608, 802, 1087
BclI TGATCA 2 cut(s) 1563, 1798
BcoDI GTCTC 2 cut(s) 333, 657
BfaI CTAG 6 cut(s) 156, 1032, 1101, 1293, 1332, 1352
BfmI CTRYAG 1 cut(s) 53
BfuI GTATCC 3 cut(s) 608, 802, 1087
BglI GCCNNNNNGGC 2 cut(s) 86, 113
BisI GCNGC 7 cut(s) 26, 392, 785, 973, 1124, 1266, 1300
BlsI GCNGC 7 cut(s) 27, 393, 786, 974, 1125, 1267, 1301
Bme1390I CCNGG 2 cut(s) 995, 1274
Bme18I GGWCC 3 cut(s) 933, 1028, 1868
BmeRI GACNNNNNGTC 1 cut(s) 481
BmgT120I GGNCC 5 cut(s) 933, 1028, 1230, 1367, 1868
BmiI GGNNCC 5 cut(s) 604, 895, 1368, 1785, 1869
BmrFI CCNGG 2 cut(s) 995, 1274
BmsI GCATC 5 cut(s) 460, 613, 1150, 1986, 2008
BpiI GAAGAC 1 cut(s) 729
BplI GAGNNNNNCTC 6 cut(s) 1112, 1144, 1654, 1686, 1820, 1852
BpmI CTGGAG 3 cut(s) 122, 1152, 1872
Bpu10I CCTNAGC 1 cut(s) 1281
BpuEI CTTGAG 2 cut(s) 272, 1515
BsaI GGTCTC 1 cut(s) 333
BsaJI CCNNGG 5 cut(s) 81, 444, 662, 699, 788
BsaWI WCCGGW 4 cut(s) 150, 490, 710, 1586
Bsc4I CCNNNNNNNGG 8 cut(s) 338, 407, 446, 537, 663, 776, 794, 1706
Bse118I RCCGGY 2 cut(s) 490, 1369
Bse1I ACTGG 5 cut(s) 139, 531, 866, 1423, 1877
BseBI CCWGG 2 cut(s) 995, 1274
BseDI CCNNGG 5 cut(s) 81, 444, 662, 699, 788
BseGI GGATG 6 cut(s) 475, 711, 837, 1201, 1459, 1612
BseLI CCNNNNNNNGG 8 cut(s) 338, 407, 446, 537, 663, 776, 794, 1706
BseMII CTCAG 7 cut(s) 89, 90, 1170, 1295, 1851, 1884, 1917
BseNI ACTGG 5 cut(s) 139, 531, 866, 1423, 1877
BseRI GAGGAG 3 cut(s) 1028, 1562, 1706
BseXI GCAGC 6 cut(s) 403, 771, 984, 1135, 1252, 1286
BseYI CCCAGC 1 cut(s) 1052
BshFI GGCC 8 cut(s) 80, 89, 116, 698, 1232, 1350, 1369, 1920
BshTI ACCGGT 1 cut(s) 490
BsiSI CCGG 5 cut(s) 151, 491, 711, 1370, 1587
BslFI GGGAC 2 cut(s) 1538, 1735
BslI CCNNNNNNNGG 8 cut(s) 338, 407, 446, 537, 663, 776, 794, 1706
BsmAI GTCTC 2 cut(s) 333, 657
BsmFI GGGAC 2 cut(s) 1538, 1735
BsmI GAATGC 1 cut(s) 1333
BsnI GGCC 8 cut(s) 80, 89, 116, 698, 1232, 1350, 1369, 1920
Bso31I GGTCTC 1 cut(s) 333
Bsp1286I GDGCHC 1 cut(s) 105
Bsp143I GATC 6 cut(s) 34, 893, 1563, 1579, 1627, 1798
Bsp19I CCATGG 1 cut(s) 662
BspACI CCGC 4 cut(s) 23, 26, 105, 1355
BspANI GGCC 8 cut(s) 80, 89, 116, 698, 1232, 1350, 1369, 1920
BspCNI CTCAG 7 cut(s) 88, 91, 1169, 1294, 1850, 1885, 1918
BspHI TCATGA 1 cut(s) 2002
BspLI GGNNCC 5 cut(s) 604, 895, 1368, 1785, 1869
BspPI GGATC 3 cut(s) 888, 901, 1587
BspQI GCTCTTC 1 cut(s) 1322
BspTNI GGTCTC 1 cut(s) 333
BsrFI RCCGGY 2 cut(s) 490, 1369
BsrI ACTGG 5 cut(s) 139, 531, 866, 1423, 1877
BssAI RCCGGY 2 cut(s) 490, 1369
BssECI CCNNGG 5 cut(s) 81, 444, 662, 699, 788
BssMI GATC 6 cut(s) 34, 893, 1563, 1579, 1627, 1798
BssSI CACGAG 1 cut(s) 816
BssT1I CCWWGG 4 cut(s) 444, 662, 699, 788
Bst2BI CACGAG 1 cut(s) 816
Bst2UI CCWGG 2 cut(s) 995, 1274
Bst4CI ACNGT 5 cut(s) 10, 337, 721, 803, 1466
Bst6I CTCTTC 5 cut(s) 223, 945, 1322, 1722, 1881
BstC8I GCNNGC 4 cut(s) 30, 105, 1234, 1701
BstDSI CCRYGG 2 cut(s) 81, 662
BstEII GGTNACC 1 cut(s) 989
BstF5I GGATG 6 cut(s) 475, 711, 837, 1201, 1459, 1612
BstKTI GATC 6 cut(s) 37, 896, 1566, 1582, 1630, 1801
BstMAI GTCTC 2 cut(s) 333, 657
BstMBI GATC 6 cut(s) 34, 893, 1563, 1579, 1627, 1798
BstMWI GCNNNNNNNGC 6 cut(s) 11, 38, 86, 113, 221, 981
BstNI CCWGG 2 cut(s) 995, 1274
BstNSI RCATGY 3 cut(s) 424, 1599, 1981
BstPI GGTNACC 1 cut(s) 989
BstSCI CCNGG 2 cut(s) 993, 1272
BstSFI CTRYAG 1 cut(s) 53
BstV1I GCAGC 6 cut(s) 403, 771, 984, 1135, 1252, 1286
BstV2I GAAGAC 1 cut(s) 729
BstX2I RGATCY 1 cut(s) 893
BstYI RGATCY 1 cut(s) 893
BsuI GTATCC 3 cut(s) 608, 802, 1087
BsuRI GGCC 8 cut(s) 80, 89, 116, 698, 1232, 1350, 1369, 1920
BtgI CCRYGG 2 cut(s) 81, 662
BtsCI GGATG 6 cut(s) 475, 711, 837, 1201, 1459, 1612
BtsI GCAGTG 1 cut(s) 633
BtsIMutI CAGTG 4 cut(s) 173, 538, 633, 1066
Cac8I GCNNGC 4 cut(s) 30, 105, 1234, 1701
CaiI CAGNNNCTG 1 cut(s) 1850
CciI TCATGA 1 cut(s) 2002
Cfr10I RCCGGY 2 cut(s) 490, 1369
Cfr13I GGNCC 5 cut(s) 933, 1028, 1230, 1367, 1868
Csp6I GTAC 3 cut(s) 411, 799, 1457
CspAI ACCGGT 1 cut(s) 490
CspCI CAANNNNNGTGG 2 cut(s) 1394, 1429
CviAII CATG 8 cut(s) 190, 421, 663, 775, 1596, 1916, 1978, 2003
CviQI GTAC 3 cut(s) 411, 799, 1457
DpnI GATC 6 cut(s) 36, 895, 1565, 1581, 1629, 1800
DpnII GATC 6 cut(s) 34, 893, 1563, 1579, 1627, 1798
DriI GACNNNNNGTC 1 cut(s) 481
Eam1104I CTCTTC 5 cut(s) 223, 945, 1322, 1722, 1881
Eam1105I GACNNNNNGTC 1 cut(s) 481
EarI CTCTTC 5 cut(s) 223, 945, 1322, 1722, 1881
EciI GGCGGA 1 cut(s) 12
Eco130I CCWWGG 4 cut(s) 444, 662, 699, 788
Eco24I GRGCYC 1 cut(s) 105
Eco31I GGTCTC 1 cut(s) 333
Eco32I GATATC 2 cut(s) 513, 1141
Eco47I GGWCC 3 cut(s) 933, 1028, 1868
Eco57I CTGAAG 4 cut(s) 27, 197, 563, 1883
Eco91I GGTNACC 1 cut(s) 989
EcoO109I RGGNCCY 1 cut(s) 1028
EcoO65I GGTNACC 1 cut(s) 989
EcoRI GAATTC 1 cut(s) 271
EcoRII CCWGG 2 cut(s) 993, 1272
EcoRV GATATC 2 cut(s) 513, 1141
EcoT14I CCWWGG 4 cut(s) 444, 662, 699, 788
EcoT22I ATGCAT 1 cut(s) 2001
EcoT38I GRGCYC 1 cut(s) 105
ErhI CCWWGG 4 cut(s) 444, 662, 699, 788
FaeI CATG 8 cut(s) 193, 424, 666, 778, 1599, 1919, 1981, 2006
FaqI GGGAC 2 cut(s) 1538, 1735
FatI CATG 8 cut(s) 189, 420, 662, 774, 1595, 1915, 1977, 2002
FauI CCCGC 1 cut(s) 112
FauNDI CATATG 1 cut(s) 871
FbaI TGATCA 2 cut(s) 1563, 1798
Fnu4HI GCNGC 7 cut(s) 26, 392, 785, 973, 1124, 1266, 1300
FokI GGATG 6 cut(s) 482, 718, 844, 1208, 1466, 1619
FriOI GRGCYC 1 cut(s) 105
Fsp4HI GCNGC 7 cut(s) 26, 392, 785, 973, 1124, 1266, 1300
FspBI CTAG 6 cut(s) 156, 1032, 1101, 1293, 1332, 1352
GluI GCNGC 7 cut(s) 26, 392, 785, 973, 1124, 1266, 1300
GsaI CCCAGC 1 cut(s) 1056
GsuI CTGGAG 3 cut(s) 122, 1152, 1872
HaeIII GGCC 8 cut(s) 80, 89, 116, 698, 1232, 1350, 1369, 1920
HapII CCGG 5 cut(s) 151, 491, 711, 1370, 1587
Hin1II CATG 8 cut(s) 193, 424, 666, 778, 1599, 1919, 1981, 2006
HincII GTYRAC 3 cut(s) 144, 678, 724
HindII GTYRAC 3 cut(s) 144, 678, 724
HindIII AAGCTT 1 cut(s) 39
HinfI GANTC 7 cut(s) 71, 182, 397, 745, 1669, 1751, 1889
HpaII CCGG 5 cut(s) 151, 491, 711, 1370, 1587
HphI GGTGA 5 cut(s) 191, 480, 1336, 1737, 1951
Hpy166II GTNNAC 9 cut(s) 144, 248, 413, 678, 724, 821, 933, 1416, 1871
Hpy188I TCNGA 8 cut(s) 46, 100, 562, 750, 1159, 1674, 1803, 1894
Hpy188III TCNNGA 7 cut(s) 756, 1112, 1131, 1283, 1532, 1973, 2003
Hpy8I GTNNAC 9 cut(s) 144, 248, 413, 678, 724, 821, 933, 1416, 1871
Hpy99I CGWCG 1 cut(s) 14
HpyAV CCTTC 8 cut(s) 106, 172, 450, 538, 665, 1084, 1675, 1858
HpyCH4III ACNGT 5 cut(s) 10, 337, 721, 803, 1466
HpyCH4IV ACGT 1 cut(s) 1200
HpyCH4V TGCA 6 cut(s) 299, 626, 1268, 1766, 1844, 1999
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 38, 86, 113, 221, 981
HpySE526I ACGT 1 cut(s) 1200
Hsp92II CATG 8 cut(s) 193, 424, 666, 778, 1599, 1919, 1981, 2006
Ksp22I TGATCA 2 cut(s) 1563, 1798
Kzo9I GATC 6 cut(s) 34, 893, 1563, 1579, 1627, 1798
LguI GCTCTTC 1 cut(s) 1322
LmnI GCTCC 3 cut(s) 141, 1120, 1133
Lsp1109I GCAGC 6 cut(s) 403, 771, 984, 1135, 1252, 1286
LweI GCATC 5 cut(s) 460, 613, 1150, 1986, 2008
MaeI CTAG 6 cut(s) 156, 1032, 1101, 1293, 1332, 1352
MaeII ACGT 1 cut(s) 1200
MaeIII GTNAC 5 cut(s) 124, 454, 989, 1510, 1973
MalI GATC 6 cut(s) 36, 895, 1565, 1581, 1629, 1800
MboI GATC 6 cut(s) 34, 893, 1563, 1579, 1627, 1798
MfeI CAATTG 3 cut(s) 1641, 1794, 1902
MflI RGATCY 1 cut(s) 893
MhlI GDGCHC 1 cut(s) 105
MlyI GAGTC 4 cut(s) 391, 1663, 1760, 1898
MmeI TCCRAC 2 cut(s) 356, 990
Mph1103I ATGCAT 1 cut(s) 2001
MseI TTAA 9 cut(s) 387, 1215, 1260, 1434, 1557, 1653, 1779, 1959, 1968
MslI CAYNNNNRTG 2 cut(s) 204, 1209
MspA1I CMGCKG 2 cut(s) 394, 1703
MspI CCGG 5 cut(s) 151, 491, 711, 1370, 1587
MspR9I CCNGG 2 cut(s) 995, 1274
MunI CAATTG 3 cut(s) 1641, 1794, 1902
Mva1269I GAATGC 1 cut(s) 1333
MvaI CCWGG 2 cut(s) 995, 1274
MwoI GCNNNNNNNGC 6 cut(s) 11, 38, 86, 113, 221, 981
NcoI CCATGG 1 cut(s) 662
NdeI CATATG 1 cut(s) 871
NdeII GATC 6 cut(s) 34, 893, 1563, 1579, 1627, 1798
NlaIII CATG 8 cut(s) 193, 424, 666, 778, 1599, 1919, 1981, 2006
NlaIV GGNNCC 5 cut(s) 604, 895, 1368, 1785, 1869
NmuCI GTSAC 3 cut(s) 124, 1510, 1973
NsiI ATGCAT 1 cut(s) 2001
NspI RCATGY 3 cut(s) 424, 1599, 1981
PagI TCATGA 1 cut(s) 2002
PciI ACATGT 1 cut(s) 1977
PciSI GCTCTTC 1 cut(s) 1322
PctI GAATGC 1 cut(s) 1333
PfeI GAWTC 3 cut(s) 71, 182, 745
PflMI CCANNNNNTGG 2 cut(s) 663, 1706
PinAI ACCGGT 1 cut(s) 490
PkrI GCNGC 7 cut(s) 27, 393, 786, 974, 1125, 1267, 1301
PleI GAGTC 4 cut(s) 391, 1663, 1759, 1897
PpsI GAGTC 4 cut(s) 391, 1663, 1759, 1897
PpuMI RGGWCCY 1 cut(s) 1028
PscI ACATGT 1 cut(s) 1977
PshBI ATTAAT 2 cut(s) 1959, 1968
PsiI TTATAA 2 cut(s) 1047, 1178
Psp5II RGGWCCY 1 cut(s) 1028
Psp6I CCWGG 2 cut(s) 993, 1272
PspEI GGTNACC 1 cut(s) 989
PspFI CCCAGC 1 cut(s) 1052
PspGI CCWGG 2 cut(s) 993, 1272
PspN4I GGNNCC 5 cut(s) 604, 895, 1368, 1785, 1869
PspPI GGNCC 5 cut(s) 933, 1028, 1230, 1367, 1868
PspPPI RGGWCCY 1 cut(s) 1028
PstNI CAGNNNCTG 1 cut(s) 1850
PsuI RGATCY 1 cut(s) 893
PvuII CAGCTG 2 cut(s) 394, 1703
RsaI GTAC 3 cut(s) 412, 800, 1458
RsaNI GTAC 3 cut(s) 411, 799, 1457
RseI CAYNNNNRTG 2 cut(s) 204, 1209
SapI GCTCTTC 1 cut(s) 1322
SaqAI TTAA 9 cut(s) 387, 1215, 1260, 1434, 1557, 1653, 1779, 1959, 1968
SatI GCNGC 7 cut(s) 26, 392, 785, 973, 1124, 1266, 1300
Sau3AI GATC 6 cut(s) 34, 893, 1563, 1579, 1627, 1798
Sau96I GGNCC 5 cut(s) 933, 1028, 1230, 1367, 1868
SchI GAGTC 4 cut(s) 391, 1663, 1760, 1898
ScrFI CCNGG 2 cut(s) 995, 1274
SduI GDGCHC 1 cut(s) 105
SfaNI GCATC 5 cut(s) 460, 613, 1150, 1986, 2008
SfcI CTRYAG 1 cut(s) 53
SfiI GGCCNNNNNGGCC 1 cut(s) 86
SinI GGWCC 3 cut(s) 933, 1028, 1868
SmiMI CAYNNNNRTG 2 cut(s) 204, 1209
SmlI CTYRAG 2 cut(s) 251, 1530
SmoI CTYRAG 2 cut(s) 251, 1530
SsiI CCGC 4 cut(s) 23, 26, 105, 1355
SspMI CTAG 6 cut(s) 156, 1032, 1101, 1293, 1332, 1352
StyD4I CCNGG 2 cut(s) 993, 1272
StyI CCWWGG 4 cut(s) 444, 662, 699, 788
TaaI ACNGT 5 cut(s) 10, 337, 721, 803, 1466
TaiI ACGT 1 cut(s) 1203
TaqI TCGA 1 cut(s) 1987
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 3 cut(s) 71, 182, 745
Tru1I TTAA 9 cut(s) 387, 1215, 1260, 1434, 1557, 1653, 1779, 1959, 1968
Tru9I TTAA 9 cut(s) 387, 1215, 1260, 1434, 1557, 1653, 1779, 1959, 1968
TscAI CASTG 4 cut(s) 180, 538, 633, 1066
TseFI GTSAC 3 cut(s) 124, 1510, 1973
TseI GCWGC 6 cut(s) 391, 784, 972, 1123, 1265, 1299
Tsp45I GTSAC 3 cut(s) 124, 1510, 1973
TspDTI ATGAA 7 cut(s) 284, 372, 1162, 1193, 1512, 1638, 1824
TspGWI ACGGA 2 cut(s) 98, 723
TspRI CASTG 4 cut(s) 180, 538, 633, 1066
Van91I CCANNNNNTGG 2 cut(s) 663, 1706
VpaK11BI GGWCC 3 cut(s) 933, 1028, 1868
VspI ATTAAT 2 cut(s) 1959, 1968
XapI RAATTY 4 cut(s) 58, 93, 271, 763
XceI RCATGY 3 cut(s) 424, 1599, 1981
XcmI CCANNNNNNNNNTGG 1 cut(s) 1001
XspI CTAG 6 cut(s) 156, 1032, 1101, 1293, 1332, 1352
Zsp2I ATGCAT 1 cut(s) 2001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.