Rh5AG540500

YTH domain family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0001378
Physical Location & Seq
Forward (+)
92834063 .. 92839151
5089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG540500.1

Sequence Viewer

Length: 1752 bp
ATGGATCAATCTTTCTCCTATCTCCCAAATGGTTATCCATCAACAGCCTATTACTATGGAGGCTATGATGGGACTGGCGACTGGGATGAGTACTCGAGATATGTGAATCCAGAGGGAGTAGATATGACTTCCGGGGTTTATGGAGATAACGGGTCTCTTATGTACCACCATGGTTATGGGTATGCACCGTATGGGCCTTATTCACCAGCAGCTACCCCTGTTCCAACTATGGGAAATGATGGTCAATTATATGGGCCTCAACACTACCAGTATCCGCCCTATTTCCAGCCGCTGACTCCAACCAGTGGGCCATACACTCCCAGTCCTGTAGCCCCTCAGAATGACGTATCCACATCTTTAGCTGCTGACCAAAAGCCTCTGCCTGTGGAAACAGCTAATGGAATCTCTAATGGCATTGCAAGTAACGGAAGTGTGAAAGGAAATAACGTTTCAGCTCCCTTATCGACATATCAAACCACATCTTTCAACTCCAATGGTTCATATGGACGAGGTGCTTTACCTGCACGTGTTCCTACTCCTGGGTACCAGGACCCAAGATATGGTTATGACACAGTACGATCTCCAATTCCTTGGTTAGATGCCCCACTTTTTTCAGATGGGCAGCATAGACCTGTGGCAAATACACCCATTACTTCTTCAAACTCGAATGGCAATAGAATTCCATCTTTGAGGAATCAGAACTACCGTCCAAATTCTCACTTCATGGGTTTGCACCACCCAAGACCACTGTCAGGAATAGGTACAGCTCAAGGGTTTATGAATAGCAGCATGTACCCAAGCAAGTTATTTGGCCAGTATGGAAACACAGTTAGATCCGGTCTGGGATTTGGGTCTCATGGTTATGATTCGCGAACCAATGGACGCACATGGCTGGCTGTTGACAACAAGTATAAACAACCCAGGGGACGTAATGGTGGTTACTATGGATATGGTAATGAGAACTCAGATGGTTTAAATGAACTCAACAGAGGACCTCGGGCGAGAGGCTCAAAGAACCAAAAGAGTTTTCCCCCTAGTGCATTGGCTAGCAAGGGACAGAACGTGCCAGCAAATCTTAGTAATGATGAGGAAAAGGATACAAGTTCTGTTCCAGACAGAGAGCAGTACAACAAAGCAGATTTTCCGGAGGATTATACTGATGCCAAATTTTTCATCATCAAGTCATATAGTGAGGATGATGTCCATAAAAGCATCAAGTATAATGTTTGGGCCAGCACACCAAATGGCAACAAGAAGCTTCATGCAGCATATCAGGAGGCTCAGGAGAAGACAGGTGGCTGCCCTGTATTTCTTTTTTTCTCGGTCAATACCAGTGGGCAATTTGTCGGTGTCGCTGAGATGTTGGGGCCTGTTGATTTTAACAAGAATTTGGAGTACTGGCAGCAAGACAAATGGAATGGCTGTTTCTCTGTCAAGTGGCATATTGTTAAAGACGTTCCTAACAGTTTGCTGAAGCATATTACTCTTGAAAATAATGAGAACAAGCCTGTGACTAATAGTAGGGACACTCAAGAGGTTAAGTTGGAACCAGGGCTTAAAATGATCAAAATATTCAAGGAGCATTCAAGCAAAACATGCATTTTGGATGACTTTGGATTTTATGAGTCCCGCCAGAAGACAATTCAGGAGAAGAAGGCTAAGCAACAGCAGCAGTTTCAGAAGCAGGTAAATTCTTTCTTGCAACTTGTTTTTCTTTGGTTCTCTTTCTTCACCTCTGGCATGGACCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

583

Amino Acids

64.87

Weight (kDa)

8.34

Isoelectric Point (pI)

32.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 388 - 526 3e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 529, 1675
Acc65I GGTACC 1 cut(s) 543
AccB1I GGYRCC 1 cut(s) 543
AccB7I CCANNNNNTGG 2 cut(s) 305, 560
AccII CGCG 1 cut(s) 871
AccIII TCCGGA 1 cut(s) 1144
AciI CCGC 3 cut(s) 275, 290, 1630
AclI AACGTT 1 cut(s) 447
AclWI GGATC 2 cut(s) 12, 828
AcoI YGGCCR 1 cut(s) 811
AcsI RAATTY 5 cut(s) 678, 712, 1166, 1387, 1690
AcuI CTGAAG 1 cut(s) 1493
AcvI CACGTG 1 cut(s) 527
AfaI GTAC 8 cut(s) 92, 164, 545, 576, 763, 794, 1127, 1397
AfiI CCNNNNNNNGG 5 cut(s) 230, 305, 539, 560, 752
AflIII ACRYGT 1 cut(s) 526
AgsI TTSAA 5 cut(s) 487, 660, 1490, 1576, 1587
AjnI CCWGG 4 cut(s) 538, 546, 920, 1549
AjuI GAANNNNNNNTTGG 2 cut(s) 1011, 1043
AluBI AGCT 6 cut(s) 212, 362, 395, 455, 767, 1258
AluI AGCT 6 cut(s) 212, 362, 395, 455, 767, 1258
Alw26I GTCTC 2 cut(s) 159, 858
AlwI GGATC 2 cut(s) 12, 828
AlwNI CAGNNNCTG 1 cut(s) 292
Ama87I CYCGRG 2 cut(s) 94, 996
Aor13HI TCCGGA 1 cut(s) 1144
AoxI GGCC 6 cut(s) 194, 254, 308, 811, 1230, 1367
ApeKI GCWGC 8 cut(s) 209, 362, 622, 786, 1265, 1299, 1402, 1669
ApoI RAATTY 5 cut(s) 678, 712, 1166, 1387, 1690
Asp718I GGTACC 1 cut(s) 543
AspS9I GGNCC 8 cut(s) 194, 254, 308, 550, 992, 1230, 1367, 1744
AsuC2I CCSGG 1 cut(s) 133
AsuHPI GGTGA 2 cut(s) 195, 1723
AsuNHI GCTAGC 1 cut(s) 1046
AvaI CYCGRG 2 cut(s) 94, 996
AvaII GGWCC 3 cut(s) 550, 992, 1744
BalI TGGCCA 1 cut(s) 813
BanI GGYRCC 1 cut(s) 543
BbrPI CACGTG 1 cut(s) 527
BbsI GAAGAC 2 cut(s) 1295, 1643
BbvI GCAGC 8 cut(s) 221, 349, 634, 798, 1277, 1286, 1414, 1681
BccI CCATC 6 cut(s) 46, 62, 233, 611, 691, 962
BciT130I CCWGG 4 cut(s) 540, 548, 922, 1551
BciVI GTATCC 3 cut(s) 282, 358, 1090
BclI TGATCA 1 cut(s) 1563
BcnI CCSGG 1 cut(s) 133
BcoDI GTCTC 2 cut(s) 159, 858
BfaI CTAG 2 cut(s) 1035, 1047
BfmI CTRYAG 1 cut(s) 327
BfuAI ACCTGC 2 cut(s) 529, 1675
BfuI GTATCC 3 cut(s) 282, 358, 1090
BisI GCNGC 9 cut(s) 210, 290, 363, 623, 787, 1266, 1300, 1403, 1670
BlpI GCTNAGC 1 cut(s) 1659
BlsI GCNGC 9 cut(s) 211, 291, 364, 624, 788, 1267, 1301, 1404, 1671
BmcAI AGTACT 2 cut(s) 92, 1397
Bme1390I CCNGG 5 cut(s) 133, 540, 548, 922, 1551
Bme18I GGWCC 3 cut(s) 550, 992, 1744
BmeT110I CYCGRG 2 cut(s) 94, 996
BmgT120I GGNCC 8 cut(s) 194, 254, 308, 550, 992, 1230, 1367, 1744
BmiI GGNNCC 4 cut(s) 545, 552, 1368, 1548
BmrFI CCNGG 5 cut(s) 133, 540, 548, 922, 1551
BmrI ACTGGG 2 cut(s) 91, 315
BmsI GCATC 3 cut(s) 589, 1150, 1221
BmtI GCTAGC 1 cut(s) 1050
BmuI ACTGGG 2 cut(s) 91, 315
BoxI GACNNNNGTC 1 cut(s) 748
BpiI GAAGAC 2 cut(s) 1295, 1643
Bpu10I CCTNAGC 1 cut(s) 1281
Bpu1102I GCTNAGC 1 cut(s) 1659
BpuEI CTTGAG 2 cut(s) 753, 1515
BpuMI CCSGG 1 cut(s) 133
BsaAI YACGTR 1 cut(s) 527
BsaI GGTCTC 2 cut(s) 159, 858
BsaJI CCNNGG 8 cut(s) 132, 169, 539, 590, 920, 921, 995, 1550
BsaWI WCCGGW 2 cut(s) 836, 1144
Bsc4I CCNNNNNNNGG 5 cut(s) 230, 305, 539, 560, 752
Bse1I ACTGG 8 cut(s) 79, 86, 268, 303, 321, 814, 1332, 1403
Bse3DI GCAATG 1 cut(s) 414
BseAI TCCGGA 1 cut(s) 1144
BseBI CCWGG 4 cut(s) 540, 548, 922, 1551
BseDI CCNNGG 8 cut(s) 132, 169, 539, 590, 920, 921, 995, 1550
BseGI GGATG 3 cut(s) 91, 1201, 1612
BseLI CCNNNNNNNGG 5 cut(s) 230, 305, 539, 560, 752
BseMI GCAATG 1 cut(s) 414
BseMII CTCAG 4 cut(s) 350, 978, 1295, 1347
BseNI ACTGG 8 cut(s) 79, 86, 268, 303, 321, 814, 1332, 1403
BseXI GCAGC 8 cut(s) 221, 349, 634, 798, 1277, 1286, 1414, 1681
BsgI GTGCAG 1 cut(s) 507
Bsh1236I CGCG 1 cut(s) 871
BshFI GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
BshNI GGYRCC 1 cut(s) 543
BsiHKCI CYCGRG 2 cut(s) 94, 996
BsiSI CCGG 3 cut(s) 132, 837, 1145
BslFI GGGAC 5 cut(s) 85, 939, 1068, 1538, 1612
BslI CCNNNNNNNGG 5 cut(s) 230, 305, 539, 560, 752
BsmAI GTCTC 2 cut(s) 159, 858
BsmFI GGGAC 5 cut(s) 85, 939, 1068, 1538, 1612
BsmI GAATGC 1 cut(s) 1582
BsnI GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
Bso31I GGTCTC 2 cut(s) 159, 858
BsoBI CYCGRG 2 cut(s) 94, 996
Bsp13I TCCGGA 1 cut(s) 1144
Bsp143I GATC 4 cut(s) 4, 578, 833, 1563
Bsp1720I GCTNAGC 1 cut(s) 1659
Bsp19I CCATGG 1 cut(s) 169
Bsp68I TCGCGA 1 cut(s) 871
BspACI CCGC 3 cut(s) 275, 290, 1630
BspANI GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
BspCNI CTCAG 4 cut(s) 349, 977, 1294, 1348
BspEI TCCGGA 1 cut(s) 1144
BspFNI CGCG 1 cut(s) 871
BspLI GGNNCC 4 cut(s) 545, 552, 1368, 1548
BspMI ACCTGC 2 cut(s) 529, 1675
BspOI GCTAGC 1 cut(s) 1050
BspPI GGATC 2 cut(s) 12, 828
BspT107I GGYRCC 1 cut(s) 543
BspTNI GGTCTC 2 cut(s) 159, 858
BsrDI GCAATG 1 cut(s) 414
BsrI ACTGG 8 cut(s) 79, 86, 268, 303, 321, 814, 1332, 1403
BssECI CCNNGG 8 cut(s) 132, 169, 539, 590, 920, 921, 995, 1550
BssMI GATC 4 cut(s) 4, 578, 833, 1563
BssT1I CCWWGG 2 cut(s) 169, 590
Bst2UI CCWGG 4 cut(s) 540, 548, 922, 1551
Bst4CI ACNGT 7 cut(s) 189, 574, 707, 750, 829, 1466, 1748
BstAPI GCANNNNNTGC 1 cut(s) 1596
BstBAI YACGTR 1 cut(s) 527
BstC8I GCNNGC 4 cut(s) 894, 1048, 1068, 1234
BstDEI CTNAG 6 cut(s) 336, 964, 1076, 1281, 1356, 1659
BstDSI CCRYGG 1 cut(s) 169
BstF5I GGATG 3 cut(s) 91, 1201, 1612
BstFNI CGCG 1 cut(s) 871
BstKTI GATC 4 cut(s) 7, 581, 836, 1566
BstMAI GTCTC 2 cut(s) 159, 858
BstMBI GATC 4 cut(s) 4, 578, 833, 1563
BstMWI GCNNNNNNNGC 3 cut(s) 521, 1596, 1669
BstNI CCWGG 4 cut(s) 540, 548, 922, 1551
BstNSI RCATGY 2 cut(s) 793, 1599
BstPAI GACNNNNGTC 1 cut(s) 748
BstSCI CCNGG 5 cut(s) 131, 538, 546, 920, 1549
BstSFI CTRYAG 1 cut(s) 327
BstUI CGCG 1 cut(s) 871
BstV1I GCAGC 8 cut(s) 221, 349, 634, 798, 1277, 1286, 1414, 1681
BstV2I GAAGAC 2 cut(s) 1295, 1643
BstX2I RGATCY 1 cut(s) 833
BstXI CCANNNNNNTGG 2 cut(s) 176, 591
BstYI RGATCY 1 cut(s) 833
BsuI GTATCC 3 cut(s) 282, 358, 1090
BsuRI GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
BtgI CCRYGG 1 cut(s) 169
BtsCI GGATG 3 cut(s) 91, 1201, 1612
BtsIMutI CAGTG 3 cut(s) 310, 746, 1339
BtuMI TCGCGA 1 cut(s) 871
BveI ACCTGC 2 cut(s) 529, 1675
Cac8I GCNNGC 4 cut(s) 894, 1048, 1068, 1234
CaiI CAGNNNCTG 1 cut(s) 292
Cfr13I GGNCC 8 cut(s) 194, 254, 308, 550, 992, 1230, 1367, 1744
CseI GACGC 1 cut(s) 891
Csp6I GTAC 8 cut(s) 91, 163, 544, 575, 762, 793, 1126, 1396
CspCI CAANNNNNGTGG 2 cut(s) 1315, 1350
CviAII CATG 8 cut(s) 170, 724, 790, 857, 888, 1262, 1596, 1741
CviQI GTAC 8 cut(s) 91, 163, 544, 575, 762, 793, 1126, 1396
DdeI CTNAG 6 cut(s) 336, 964, 1076, 1281, 1356, 1659
DpnI GATC 4 cut(s) 6, 580, 835, 1565
DpnII GATC 4 cut(s) 4, 578, 833, 1563
DraI TTTAAA 1 cut(s) 975
EaeI YGGCCR 1 cut(s) 811
EciI GGCGGA 1 cut(s) 264
Eco130I CCWWGG 2 cut(s) 169, 590
Eco31I GGTCTC 2 cut(s) 159, 858
Eco47I GGWCC 3 cut(s) 550, 992, 1744
Eco57I CTGAAG 1 cut(s) 1493
Eco72I CACGTG 1 cut(s) 527
Eco88I CYCGRG 2 cut(s) 94, 996
EcoO109I RGGNCCY 3 cut(s) 550, 992, 1367
EcoRI GAATTC 1 cut(s) 678
EcoRII CCWGG 4 cut(s) 538, 546, 920, 1549
EcoT14I CCWWGG 2 cut(s) 169, 590
EcoT22I ATGCAT 1 cut(s) 1601
ErhI CCWWGG 2 cut(s) 169, 590
FaeI CATG 8 cut(s) 173, 727, 793, 860, 891, 1265, 1599, 1744
FaqI GGGAC 5 cut(s) 85, 939, 1068, 1538, 1612
FatI CATG 8 cut(s) 169, 723, 789, 856, 887, 1261, 1595, 1740
FauI CCCGC 1 cut(s) 1637
FauNDI CATATG 1 cut(s) 502
FbaI TGATCA 1 cut(s) 1563
Fnu4HI GCNGC 9 cut(s) 210, 290, 363, 623, 787, 1266, 1300, 1403, 1670
FokI GGATG 3 cut(s) 98, 1208, 1619
Fsp4HI GCNGC 9 cut(s) 210, 290, 363, 623, 787, 1266, 1300, 1403, 1670
FspBI CTAG 2 cut(s) 1035, 1047
GluI GCNGC 9 cut(s) 210, 290, 363, 623, 787, 1266, 1300, 1403, 1670
HaeIII GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
HapII CCGG 3 cut(s) 132, 837, 1145
HgaI GACGC 1 cut(s) 891
Hin1II CATG 8 cut(s) 173, 727, 793, 860, 891, 1265, 1599, 1744
HincII GTYRAC 1 cut(s) 901
HindII GTYRAC 1 cut(s) 901
HindIII AAGCTT 1 cut(s) 1256
HinfI GANTC 6 cut(s) 106, 295, 402, 694, 866, 1625
HpaII CCGG 3 cut(s) 132, 837, 1145
HphI GGTGA 2 cut(s) 195, 1723
Hpy166II GTNNAC 1 cut(s) 901
Hpy188I TCNGA 5 cut(s) 339, 616, 699, 967, 1680
Hpy8I GTNNAC 1 cut(s) 901
HpyAV CCTTC 1 cut(s) 1648
HpyCH4III ACNGT 7 cut(s) 189, 574, 707, 750, 829, 1466, 1748
HpyCH4IV ACGT 6 cut(s) 345, 447, 526, 928, 1062, 1455
HpyCH4V TGCA 8 cut(s) 185, 419, 524, 733, 1040, 1265, 1599, 1702
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 1596, 1669
HpyF3I CTNAG 6 cut(s) 336, 964, 1076, 1281, 1356, 1659
HpySE526I ACGT 6 cut(s) 345, 447, 526, 928, 1062, 1455
Hsp92II CATG 8 cut(s) 173, 727, 793, 860, 891, 1265, 1599, 1744
Kpn2I TCCGGA 1 cut(s) 1144
KpnI GGTACC 1 cut(s) 547
Ksp22I TGATCA 1 cut(s) 1563
Kzo9I GATC 4 cut(s) 4, 578, 833, 1563
LmnI GCTCC 2 cut(s) 460, 1579
Lsp1109I GCAGC 8 cut(s) 221, 349, 634, 798, 1277, 1286, 1414, 1681
LweI GCATC 3 cut(s) 589, 1150, 1221
MaeI CTAG 2 cut(s) 1035, 1047
MaeII ACGT 6 cut(s) 345, 447, 526, 928, 1062, 1455
MaeIII GTNAC 3 cut(s) 422, 938, 1510
MalI GATC 4 cut(s) 6, 580, 835, 1565
MboI GATC 4 cut(s) 4, 578, 833, 1563
MboII GAAGA 5 cut(s) 648, 1300, 1648, 1663, 1720
MflI RGATCY 1 cut(s) 833
MlsI TGGCCA 1 cut(s) 813
MluCI AATT 9 cut(s) 245, 585, 678, 712, 1166, 1340, 1387, 1641, 1690
MluNI TGGCCA 1 cut(s) 813
MlyI GAGTC 2 cut(s) 289, 1634
MmeI TCCRAC 3 cut(s) 248, 323, 1524
Mox20I TGGCCA 1 cut(s) 813
Mph1103I ATGCAT 1 cut(s) 1601
MroI TCCGGA 1 cut(s) 1144
MscI TGGCCA 1 cut(s) 813
MseI TTAA 5 cut(s) 974, 1380, 1449, 1539, 1557
MslI CAYNNNNRTG 2 cut(s) 174, 861
Msp20I TGGCCA 1 cut(s) 813
MspA1I CMGCKG 1 cut(s) 292
MspI CCGG 3 cut(s) 132, 837, 1145
MspR9I CCNGG 5 cut(s) 133, 540, 548, 922, 1551
Mva1269I GAATGC 1 cut(s) 1582
MvaI CCWGG 4 cut(s) 540, 548, 922, 1551
MvnI CGCG 1 cut(s) 871
MwoI GCNNNNNNNGC 3 cut(s) 521, 1596, 1669
NciI CCSGG 1 cut(s) 133
NcoI CCATGG 1 cut(s) 169
NdeI CATATG 1 cut(s) 502
NdeII GATC 4 cut(s) 4, 578, 833, 1563
NheI GCTAGC 1 cut(s) 1046
NlaIII CATG 8 cut(s) 173, 727, 793, 860, 891, 1265, 1599, 1744
NlaIV GGNNCC 4 cut(s) 545, 552, 1368, 1548
NmuCI GTSAC 1 cut(s) 1510
NruI TCGCGA 1 cut(s) 871
NsiI ATGCAT 1 cut(s) 1601
NspI RCATGY 2 cut(s) 793, 1599
PaeR7I CTCGAG 1 cut(s) 94
PasI CCCWGGG 1 cut(s) 921
PctI GAATGC 1 cut(s) 1582
PfeI GAWTC 4 cut(s) 106, 402, 694, 866
PflMI CCANNNNNTGG 2 cut(s) 305, 560
PkrI GCNGC 9 cut(s) 211, 291, 364, 624, 788, 1267, 1301, 1404, 1671
PleI GAGTC 2 cut(s) 289, 1633
PmaCI CACGTG 1 cut(s) 527
PmlI CACGTG 1 cut(s) 527
PpsI GAGTC 2 cut(s) 289, 1633
Ppu21I YACGTR 1 cut(s) 527
PpuMI RGGWCCY 2 cut(s) 550, 992
PshAI GACNNNNGTC 1 cut(s) 748
Psp1406I AACGTT 1 cut(s) 447
Psp5II RGGWCCY 2 cut(s) 550, 992
Psp6I CCWGG 4 cut(s) 538, 546, 920, 1549
PspCI CACGTG 1 cut(s) 527
PspGI CCWGG 4 cut(s) 538, 546, 920, 1549
PspN4I GGNNCC 4 cut(s) 545, 552, 1368, 1548
PspPI GGNCC 8 cut(s) 194, 254, 308, 550, 992, 1230, 1367, 1744
PspPPI RGGWCCY 2 cut(s) 550, 992
PstNI CAGNNNCTG 1 cut(s) 292
PsuI RGATCY 1 cut(s) 833
RruI TCGCGA 1 cut(s) 871
RsaI GTAC 8 cut(s) 92, 164, 545, 576, 763, 794, 1127, 1397
RsaNI GTAC 8 cut(s) 91, 163, 544, 575, 762, 793, 1126, 1396
RseI CAYNNNNRTG 2 cut(s) 174, 861
SaqAI TTAA 5 cut(s) 974, 1380, 1449, 1539, 1557
SatI GCNGC 9 cut(s) 210, 290, 363, 623, 787, 1266, 1300, 1403, 1670
Sau3AI GATC 4 cut(s) 4, 578, 833, 1563
Sau96I GGNCC 8 cut(s) 194, 254, 308, 550, 992, 1230, 1367, 1744
ScaI AGTACT 2 cut(s) 92, 1397
SchI GAGTC 2 cut(s) 289, 1634
ScrFI CCNGG 5 cut(s) 133, 540, 548, 922, 1551
SfaNI GCATC 3 cut(s) 589, 1150, 1221
SfcI CTRYAG 1 cut(s) 327
Sfr274I CTCGAG 1 cut(s) 94
SinI GGWCC 3 cut(s) 550, 992, 1744
SlaI CTCGAG 1 cut(s) 94
SmiMI CAYNNNNRTG 2 cut(s) 174, 861
SmlI CTYRAG 3 cut(s) 94, 768, 1530
SmoI CTYRAG 3 cut(s) 94, 768, 1530
Sse9I AATT 9 cut(s) 245, 585, 678, 712, 1166, 1340, 1387, 1641, 1690
SsiI CCGC 3 cut(s) 275, 290, 1630
SspI AATATT 1 cut(s) 1572
SspMI CTAG 2 cut(s) 1035, 1047
StyD4I CCNGG 5 cut(s) 131, 538, 546, 920, 1549
StyI CCWWGG 2 cut(s) 169, 590
TaaI ACNGT 7 cut(s) 189, 574, 707, 750, 829, 1466, 1748
TaiI ACGT 6 cut(s) 348, 450, 529, 931, 1065, 1458
TaqI TCGA 3 cut(s) 95, 464, 665
TaqII GACCGA 1 cut(s) 1312
TasI AATT 9 cut(s) 245, 585, 678, 712, 1166, 1340, 1387, 1641, 1690
TatI WGTACW 3 cut(s) 90, 1125, 1395
TauI GCSGC 1 cut(s) 292
TfiI GAWTC 4 cut(s) 106, 402, 694, 866
Tru1I TTAA 5 cut(s) 974, 1380, 1449, 1539, 1557
Tru9I TTAA 5 cut(s) 974, 1380, 1449, 1539, 1557
TscAI CASTG 3 cut(s) 310, 753, 1339
TseFI GTSAC 1 cut(s) 1510
TseI GCWGC 8 cut(s) 209, 362, 622, 786, 1265, 1299, 1402, 1669
Tsp45I GTSAC 1 cut(s) 1510
TspDTI ATGAA 6 cut(s) 489, 712, 794, 993, 1162, 1250
TspGWI ACGGA 1 cut(s) 441
TspRI CASTG 3 cut(s) 310, 753, 1339
Van91I CCANNNNNTGG 2 cut(s) 305, 560
VpaK11BI GGWCC 3 cut(s) 550, 992, 1744
XapI RAATTY 5 cut(s) 678, 712, 1166, 1387, 1690
XceI RCATGY 2 cut(s) 793, 1599
XcmI CCANNNNNNNNNTGG 1 cut(s) 173
XhoI CTCGAG 1 cut(s) 94
XspI CTAG 2 cut(s) 1035, 1047
ZrmI AGTACT 2 cut(s) 92, 1397
Zsp2I ATGCAT 1 cut(s) 1601
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.